View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6641_high_124 (Length: 230)
Name: NF6641_high_124
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6641_high_124 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 21705804 - 21706013
Alignment:
| Q |
18 |
atgaaagaacatgcattaatcctaagtctaactaaagtacataaatatgcttcttaattaaattacatggtccataccataactttctgttttctgacag |
117 |
Q |
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| T |
21705804 |
atgaaagaacatgcattaatcctaagtctaactaaagtacataaatatgcttcttaattaaattacatggtccataccataactttctgttttctgacag |
21705903 |
T |
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| Q |
118 |
caacattcccccaattcctttaatttttataacacatttttgttagtgaattcaactccataattaattatgctactctatagttacgtattggttgatg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21705904 |
caacattcccccaattcctttaatttttataacacatttttgttagtgaattcaattccataattaattatgctactctatagttacgtattggttgatg |
21706003 |
T |
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| Q |
218 |
atgtccatct |
227 |
Q |
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| T |
21706004 |
agttccatct |
21706013 |
T |
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