View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6641_high_79 (Length: 290)
Name: NF6641_high_79
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6641_high_79 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 9 - 275
Target Start/End: Original strand, 27172081 - 27172347
Alignment:
| Q |
9 |
gaagaatattattttgtagaggtttaggtagtgaaggaaaggtttgatttgatgtttcaatgagataattagtatttggtggcatttgtgaactaagaat |
108 |
Q |
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| T |
27172081 |
gaagaatattattttgtagaggtttaggtagtgaaggaaaggtttgatttgttgtttcaatgagataattagtatttggtggcatttgtgaactaagaat |
27172180 |
T |
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| Q |
109 |
gaaaatggaattggaacttttataatttgcgttgtttctcttaggatgagaagacgaaagtaaattgtgagtttgtggatctaagccttgagaaataagc |
208 |
Q |
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| T |
27172181 |
gaaaatggaattggaacttttataatttgagttgtttctcttaggatgagaagaagaaagtaaattgtgagtttgtggatctaagccttgagaaataagc |
27172280 |
T |
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| Q |
209 |
ttctttttaatgcaagagttccaaaaattcttcacttcattatcagttctaccaggaaggtgctttg |
275 |
Q |
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| T |
27172281 |
ttctttttaatgcaagagttccaaaaattcttcacttcattatcagttctaccaggaaggtgctttg |
27172347 |
T |
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