View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6641_high_84 (Length: 272)
Name: NF6641_high_84
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6641_high_84 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 979593 - 979848
Alignment:
| Q |
1 |
aaagaaagaatagtggaaagagccatgaagagggaaaatgttctctgaaagaaaaatgaagacaaacccaacactataatttactnnnnnnnnnttagag |
100 |
Q |
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| T |
979593 |
aaagaaagaatagtggaaagagccatgaagagggaaaatgttctctgaaagaaaaatgaagacaaacccaacactataatttactaaaaaaaa-ttagag |
979691 |
T |
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| Q |
101 |
atgaatggagtacctggaagaccaaatagccactacaaatttttcaaaacagaactccaaaaactggcgacaatgatttctcatgaacactgaaaaaaca |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |
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| T |
979692 |
atgaatggagtaccttgaagaccaaatagccactacaattttttcaaaacagaactccaaaaactggtgacaatgatttctcatgaacactaaaaaaaca |
979791 |
T |
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| Q |
201 |
acaccagattagtaaagagaataagctcattagagatgatgggcagaaagtaaaaag |
257 |
Q |
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|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
979792 |
acaccaaattagtaaagagaataatctcattagagatgatgggcagaaagtaaaaag |
979848 |
T |
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