View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6641_high_91 (Length: 261)
Name: NF6641_high_91
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6641_high_91 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 9195809 - 9196039
Alignment:
| Q |
16 |
actagaaggaaaaaccgacggcaagcaaagtaacgaagacaatcgttgcaaaaaacaacaagaagcatggccaataatgcagaaacaacgacattgacga |
115 |
Q |
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|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9195809 |
actagaaggaaaaaccgacggcaagcaaagaaacgaagacagtcgttgcaaaaaacaacaagaagcatggccaataatgcagaaacaacgacattgacga |
9195908 |
T |
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| Q |
116 |
tgaacaacaa--gtctaaggagatacgcctgatcatccaagcctaaaaacaatcagcgacaaatggagatcaagacaaaagttattccacttctgcgtgt |
213 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
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| T |
9195909 |
tgaacaacaactgtctaaggagatacgcctgatcatccaagcctaaaaacaatcagcgacaaatggagatcaagacaaaagttattcaacttctgctcgt |
9196008 |
T |
|
| Q |
214 |
aaattcgttcactgaaatggatcatgaagat |
244 |
Q |
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|||||||||||| |||||||||||||||||| |
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| T |
9196009 |
aaattcgttcaccgaaatggatcatgaagat |
9196039 |
T |
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