View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6641_low_107 (Length: 250)
Name: NF6641_low_107
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6641_low_107 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18516506 - 18516751
Alignment:
| Q |
1 |
ctgtttcagtgatgttttcatcggctctctacataatagcttatggaaacaacttatagaagcttacttgaaaataatttaatcttttgttcaaaatttg |
100 |
Q |
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| T |
18516506 |
ctgtttcagtgatattttcaccggctctctacataatagcttatggaaacaacttatagaagcttacttgaaaataatttaatcttttgttcaaaatttg |
18516605 |
T |
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| Q |
101 |
aagaaatcgcaagaaatcataaaaataacaacgaaaacgattaggaacacagtaaatcaagaatcaagaataaacaacaatgcaatgacgattatgaaat |
200 |
Q |
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| T |
18516606 |
aagaaatcgcaagaaatcatagaaataacaacgaaaacgattaggaacacagtaaatcaagaatcaagaataaacaacaatgtaatcacgattatgaaat |
18516705 |
T |
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| Q |
201 |
caatatcatgattatgatttgaagaaatgaataagaatgaggaaga |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18516706 |
caatatcatgattatgatttgaagaaatgaataagaatgaggaaga |
18516751 |
T |
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