View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6641_low_27 (Length: 469)

Name: NF6641_low_27
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6641_low_27
NF6641_low_27
[»] chr4 (74 HSPs)
chr4 (16-274)||(44145842-44146100)
chr4 (149-378)||(55080581-55080815)
chr4 (148-379)||(17182490-17182728)
chr4 (154-379)||(22186720-22186950)
chr4 (176-385)||(7977530-7977746)
chr4 (151-379)||(56135750-56135965)
chr4 (151-341)||(43961449-43961644)
chr4 (176-386)||(37761459-37761673)
chr4 (176-378)||(47846090-47846298)
chr4 (176-379)||(54576362-54576572)
chr4 (196-379)||(29993826-29994014)
chr4 (196-345)||(4437480-4437633)
chr4 (196-379)||(5824902-5825085)
chr4 (197-379)||(51329797-51329983)
chr4 (180-379)||(21694929-21695131)
chr4 (197-321)||(54001162-54001289)
chr4 (291-379)||(49735469-49735557)
chr4 (187-378)||(34995052-34995247)
chr4 (309-379)||(44145774-44145844)
chr4 (16-97)||(44155971-44156052)
chr4 (287-379)||(54935068-54935161)
chr4 (210-323)||(9030272-9030391)
chr4 (314-377)||(46007879-46007942)
chr4 (216-376)||(55510173-55510338)
chr4 (287-376)||(35543448-35543537)
chr4 (269-377)||(51074344-51074459)
chr4 (297-378)||(54576329-54576410)
chr4 (315-379)||(31348500-31348564)
chr4 (290-378)||(47846417-47846505)
chr4 (311-379)||(54320609-54320677)
chr4 (167-379)||(47433734-47433952)
chr4 (259-384)||(29798284-29798410)
chr4 (249-376)||(27735749-27735881)
chr4 (335-379)||(49735691-49735735)
chr4 (311-379)||(54935244-54935312)
chr4 (148-282)||(11089619-11089756)
chr4 (318-377)||(16400803-16400862)
chr4 (297-364)||(21694906-21694973)
chr4 (291-378)||(27735900-27735987)
chr4 (212-290)||(14539367-14539445)
chr4 (335-385)||(37711133-37711183)
chr4 (298-379)||(37711285-37711366)
chr4 (311-379)||(1968534-1968602)
chr4 (311-379)||(6938422-6938490)
chr4 (198-379)||(17938164-17938351)
chr4 (297-377)||(29993774-29993854)
chr4 (97-157)||(44156147-44156207)
chr4 (312-379)||(26166938-26167005)
chr4 (326-373)||(35565565-35565612)
chr4 (312-378)||(2247977-2248043)
chr4 (313-379)||(37761641-37761707)
chr4 (214-264)||(51075218-51075268)
chr4 (338-379)||(41174547-41174588)
chr4 (251-345)||(41227518-41227614)
chr4 (250-379)||(45132610-45132738)
chr4 (337-377)||(5731032-5731072)
chr4 (311-379)||(34995224-34995292)
chr4 (311-379)||(45741891-45741959)
chr4 (339-379)||(53260719-53260759)
chr4 (340-384)||(54320431-54320475)
chr4 (338-375)||(34110803-34110840)
chr4 (313-377)||(4437428-4437492)
chr4 (311-379)||(45742065-45742133)
chr4 (348-379)||(41174357-41174388)
chr4 (298-355)||(7977520-7977578)
chr4 (167-245)||(35543333-35543411)
chr4 (346-379)||(27775584-27775617)
chr4 (311-379)||(31348317-31348390)
chr4 (326-379)||(47694350-47694403)
chr4 (335-379)||(5730831-5730875)
chr4 (157-233)||(11842325-11842401)
chr4 (311-379)||(24565347-24565415)
chr4 (296-340)||(32192847-32192891)
chr4 (336-364)||(49735667-49735695)
[»] chr8 (56 HSPs)
chr8 (176-379)||(12022178-12022386)
chr8 (148-345)||(39449339-39449546)
chr8 (187-379)||(8815187-8815384)
chr8 (176-379)||(43732680-43732896)
chr8 (176-379)||(30365131-30365339)
chr8 (198-378)||(16024155-16024341)
chr8 (151-377)||(20472702-20472933)
chr8 (172-379)||(9933241-9933454)
chr8 (217-379)||(43826333-43826500)
chr8 (179-372)||(34196316-34196514)
chr8 (198-379)||(8671849-8672037)
chr8 (219-379)||(9434377-9434542)
chr8 (211-379)||(40633059-40633231)
chr8 (213-377)||(6453185-6453356)
chr8 (290-376)||(7394615-7394701)
chr8 (297-379)||(43732848-43732930)
chr8 (313-379)||(31543249-31543315)
chr8 (211-379)||(29937513-29937676)
chr8 (311-379)||(1027023-1027091)
chr8 (297-379)||(12022143-12022226)
chr8 (311-379)||(2248453-2248521)
chr8 (311-374)||(1281149-1281212)
chr8 (308-379)||(9718651-9718722)
chr8 (287-374)||(36308994-36309081)
chr8 (297-379)||(8815142-8815224)
chr8 (311-379)||(31543073-31543141)
chr8 (312-379)||(30365306-30365373)
chr8 (313-379)||(7503131-7503197)
chr8 (325-379)||(40632997-40633051)
chr8 (311-376)||(7979144-7979209)
chr8 (311-356)||(30581988-30582033)
chr8 (312-376)||(11575582-11575646)
chr8 (315-379)||(13404977-13405041)
chr8 (297-377)||(16024315-16024394)
chr8 (311-379)||(34634318-34634386)
chr8 (335-379)||(41103505-41103549)
chr8 (211-377)||(24243118-24243287)
chr8 (320-379)||(34196492-34196550)
chr8 (341-379)||(4247725-4247763)
chr8 (315-379)||(11033420-11033482)
chr8 (341-378)||(28083744-28083781)
chr8 (291-376)||(30479721-30479806)
chr8 (298-379)||(31738585-31738666)
chr8 (343-379)||(3726864-3726900)
chr8 (340-379)||(2481977-2482016)
chr8 (342-393)||(42650537-42650588)
chr8 (345-379)||(6315067-6315101)
chr8 (316-378)||(30479897-30479959)
chr8 (312-377)||(2412967-2413027)
chr8 (311-376)||(10028114-10028179)
chr8 (311-376)||(10028298-10028363)
chr8 (342-379)||(33922526-33922563)
chr8 (227-288)||(38198135-38198196)
chr8 (335-379)||(11785725-11785769)
chr8 (244-288)||(27487087-27487131)
chr8 (311-379)||(40990359-40990426)
[»] chr5 (59 HSPs)
chr5 (176-379)||(10204577-10204785)
chr5 (176-379)||(15986659-15986867)
chr5 (151-379)||(40305670-40305908)
chr5 (151-378)||(8551427-8551660)
chr5 (176-379)||(33744228-33744436)
chr5 (176-378)||(34980812-34981019)
chr5 (176-379)||(10043253-10043461)
chr5 (197-379)||(21580948-21581135)
chr5 (226-345)||(5688448-5688572)
chr5 (307-379)||(13634882-13634954)
chr5 (291-379)||(14245089-14245177)
chr5 (311-379)||(7544137-7544205)
chr5 (315-379)||(13634712-13634776)
chr5 (291-378)||(1657968-1658055)
chr5 (187-290)||(6382422-6382525)
chr5 (216-384)||(11436935-11437108)
chr5 (311-379)||(26414894-26414962)
chr5 (317-376)||(2550533-2550592)
chr5 (296-379)||(14245206-14245289)
chr5 (310-379)||(10476202-10476271)
chr5 (290-379)||(14684638-14684727)
chr5 (298-379)||(15858902-15858983)
chr5 (335-379)||(16938480-16938524)
chr5 (291-375)||(36363187-36363271)
chr5 (196-338)||(6597845-6597984)
chr5 (187-288)||(10043055-10043156)
chr5 (309-373)||(10043425-10043489)
chr5 (316-384)||(10476022-10476090)
chr5 (291-379)||(15986625-15986713)
chr5 (336-379)||(5688590-5688633)
chr5 (312-379)||(10204752-10204819)
chr5 (340-379)||(20147074-20147113)
chr5 (298-388)||(12035928-12036018)
chr5 (212-290)||(12036007-12036084)
chr5 (313-379)||(33744194-33744260)
chr5 (313-379)||(34980987-34981053)
chr5 (308-376)||(11756882-11756949)
chr5 (311-378)||(16501966-16502034)
chr5 (249-379)||(4373674-4373809)
chr5 (335-378)||(7544335-7544378)
chr5 (340-379)||(40305671-40305710)
chr5 (312-379)||(40815298-40815365)
chr5 (319-378)||(42681450-42681509)
chr5 (335-377)||(11757102-11757144)
chr5 (339-377)||(21581150-21581188)
chr5 (336-378)||(22022849-22022891)
chr5 (311-384)||(8502831-8502904)
chr5 (291-379)||(11437094-11437185)
chr5 (303-376)||(12036105-12036177)
chr5 (335-384)||(16938678-16938727)
chr5 (298-334)||(6382357-6382393)
chr5 (345-377)||(14681473-14681505)
chr5 (198-379)||(28279533-28279720)
chr5 (348-379)||(9856891-9856922)
chr5 (337-388)||(36363024-36363075)
chr5 (346-375)||(36392359-36392388)
chr5 (311-379)||(10650589-10650657)
chr5 (337-377)||(12600703-12600743)
chr5 (311-379)||(20513612-20513680)
[»] chr7 (65 HSPs)
chr7 (176-375)||(33519053-33519257)
chr7 (211-388)||(37925833-37926015)
chr7 (176-379)||(36267588-36267796)
chr7 (167-379)||(39646470-39646687)
chr7 (196-379)||(28074158-28074351)
chr7 (148-363)||(48013520-48013740)
chr7 (176-378)||(37620776-37620983)
chr7 (181-377)||(35421967-35422168)
chr7 (171-377)||(21857350-21857560)
chr7 (233-382)||(12670928-12671082)
chr7 (176-377)||(31364080-31364285)
chr7 (176-379)||(48881593-48881792)
chr7 (205-379)||(8122145-8122328)
chr7 (266-382)||(12682854-12682975)
chr7 (213-378)||(16833684-16833867)
chr7 (311-388)||(39856040-39856117)
chr7 (198-361)||(48015229-48015394)
chr7 (151-289)||(23116269-23116408)
chr7 (215-324)||(3215934-3216048)
chr7 (297-379)||(28074104-28074186)
chr7 (298-379)||(48881559-48881640)
chr7 (311-379)||(36267554-36267622)
chr7 (196-334)||(3143526-3143673)
chr7 (311-379)||(31571645-31571713)
chr7 (287-379)||(47390856-47390948)
chr7 (308-379)||(1051670-1051741)
chr7 (312-379)||(33519224-33519291)
chr7 (287-377)||(18795746-18795835)
chr7 (249-377)||(33655216-33655349)
chr7 (287-379)||(13771097-13771189)
chr7 (180-276)||(30592292-30592388)
chr7 (312-379)||(4833532-4833599)
chr7 (305-379)||(41496958-41497032)
chr7 (298-379)||(13770949-13771030)
chr7 (311-379)||(4835480-4835548)
chr7 (307-379)||(18231757-18231829)
chr7 (336-379)||(25887193-25887236)
chr7 (312-379)||(30592254-30592321)
chr7 (296-379)||(40196533-40196616)
chr7 (300-367)||(48147404-48147471)
chr7 (187-290)||(2087785-2087892)
chr7 (297-378)||(37926002-37926083)
chr7 (314-379)||(40282198-40282263)
chr7 (311-377)||(42306505-42306571)
chr7 (311-377)||(43230239-43230305)
chr7 (337-379)||(47391057-47391099)
chr7 (149-290)||(17852966-17853106)
chr7 (312-385)||(48015383-48015456)
chr7 (326-378)||(23116418-23116470)
chr7 (311-379)||(34228494-34228562)
chr7 (312-379)||(13425121-13425188)
chr7 (320-379)||(31553186-31553243)
chr7 (348-379)||(37417835-37417866)
chr7 (249-351)||(41497065-41497172)
chr7 (309-363)||(25887366-25887420)
chr7 (312-377)||(26365770-26365836)
chr7 (297-355)||(31364070-31364128)
chr7 (336-378)||(47230019-47230061)
chr7 (313-374)||(37620951-37621012)
chr7 (337-374)||(41008188-41008225)
chr7 (348-388)||(17852873-17852913)
chr7 (350-378)||(24970379-24970407)
chr7 (298-370)||(35422126-35422198)
chr7 (297-345)||(39646630-39646678)
chr7 (348-376)||(39646671-39646699)
[»] scaffold0095 (1 HSPs)
scaffold0095 (148-345)||(8182-8390)
[»] chr1 (53 HSPs)
chr1 (176-379)||(1085524-1085733)
chr1 (153-379)||(33643269-33643499)
chr1 (196-379)||(35927815-35928001)
chr1 (176-377)||(40709327-40709532)
chr1 (148-352)||(47071079-47071288)
chr1 (177-331)||(25268313-25268472)
chr1 (172-379)||(525133-525343)
chr1 (297-379)||(51303385-51303467)
chr1 (196-343)||(2506576-2506728)
chr1 (218-350)||(51303461-51303600)
chr1 (211-372)||(13386989-13387163)
chr1 (150-337)||(1344592-1344783)
chr1 (287-372)||(23536839-23536924)
chr1 (176-273)||(35512909-35513006)
chr1 (313-376)||(35512974-35513037)
chr1 (228-379)||(17622537-17622694)
chr1 (311-384)||(12234006-12234079)
chr1 (211-379)||(20607224-20607390)
chr1 (291-379)||(38509895-38509983)
chr1 (311-373)||(2859107-2859169)
chr1 (259-379)||(30010333-30010458)
chr1 (211-345)||(40287325-40287467)
chr1 (335-390)||(20607416-20607471)
chr1 (308-379)||(41498405-41498476)
chr1 (335-379)||(26324015-26324059)
chr1 (311-379)||(35349637-35349705)
chr1 (311-379)||(40094934-40095002)
chr1 (233-372)||(50079476-50079620)
chr1 (311-378)||(12234185-12234252)
chr1 (311-377)||(38510069-38510135)
chr1 (309-379)||(40709293-40709363)
chr1 (226-334)||(52707691-52707803)
chr1 (311-379)||(30010507-30010575)
chr1 (311-379)||(32951493-32951561)
chr1 (312-379)||(2858933-2859000)
chr1 (311-388)||(1085481-1085559)
chr1 (311-377)||(7444481-7444547)
chr1 (260-376)||(51597672-51597793)
chr1 (337-377)||(20576136-20576176)
chr1 (316-376)||(35512638-35512694)
chr1 (345-379)||(26941042-26941076)
chr1 (290-379)||(2470731-2470820)
chr1 (311-372)||(10391880-10391941)
chr1 (311-372)||(25268439-25268500)
chr1 (249-379)||(40095041-40095177)
chr1 (311-379)||(41498579-41498648)
chr1 (312-372)||(49832555-49832615)
chr1 (312-379)||(35927988-35928055)
chr1 (311-379)||(35349467-35349533)
chr1 (345-377)||(2470934-2470966)
chr1 (230-290)||(44210994-44211054)
chr1 (316-376)||(49946768-49946828)
chr1 (298-378)||(52428068-52428147)
[»] chr6 (50 HSPs)
chr6 (211-379)||(15353365-15353537)
chr6 (211-379)||(15323226-15323399)
chr6 (197-387)||(9051590-9051783)
chr6 (266-384)||(23090991-23091114)
chr6 (176-379)||(10293251-10293457)
chr6 (178-379)||(31798919-31799128)
chr6 (215-340)||(26318345-26318475)
chr6 (211-379)||(4097305-4097479)
chr6 (249-377)||(4097620-4097754)
chr6 (176-384)||(10818225-10818425)
chr6 (311-379)||(14515474-14515542)
chr6 (187-290)||(3841180-3841284)
chr6 (286-380)||(10818366-10818460)
chr6 (211-281)||(15373669-15373739)
chr6 (196-378)||(25468454-25468633)
chr6 (313-379)||(30487307-30487373)
chr6 (296-373)||(34177060-34177137)
chr6 (311-379)||(9721139-9721207)
chr6 (311-377)||(9719034-9719100)
chr6 (313-379)||(12811157-12811223)
chr6 (311-377)||(19278213-19278278)
chr6 (311-372)||(23091133-23091195)
chr6 (311-377)||(30487480-30487546)
chr6 (283-380)||(9719178-9719274)
chr6 (176-281)||(34176606-34176711)
chr6 (291-379)||(665842-665929)
chr6 (296-335)||(15373737-15373776)
chr6 (298-379)||(4097236-4097317)
chr6 (316-377)||(31849113-31849174)
chr6 (249-289)||(28477076-28477116)
chr6 (249-289)||(29692974-29693014)
chr6 (309-365)||(34176586-34176642)
chr6 (286-329)||(5287471-5287514)
chr6 (312-379)||(16738172-16738238)
chr6 (287-377)||(30850063-30850153)
chr6 (298-379)||(14515633-14515714)
chr6 (311-379)||(9051535-9051603)
chr6 (335-379)||(9298690-9298734)
chr6 (312-372)||(10293424-10293484)
chr6 (313-377)||(26318482-26318546)
chr6 (348-379)||(1300630-1300661)
chr6 (307-377)||(5585304-5585375)
chr6 (312-375)||(19278039-19278102)
chr6 (346-377)||(21607054-21607085)
chr6 (305-379)||(1300789-1300863)
chr6 (297-379)||(3841247-3841329)
chr6 (291-345)||(31849265-31849319)
chr6 (283-379)||(9721285-9721380)
chr6 (337-377)||(33041473-33041513)
chr6 (311-379)||(33235952-33236020)
[»] chr2 (61 HSPs)
chr2 (197-385)||(31061354-31061547)
chr2 (196-379)||(45257308-45257496)
chr2 (187-379)||(42296349-42296546)
chr2 (218-372)||(33265615-33265773)
chr2 (215-378)||(3094427-3094595)
chr2 (197-380)||(1052811-1053001)
chr2 (214-379)||(2381060-2381230)
chr2 (218-373)||(31928121-31928286)
chr2 (211-384)||(34187571-34187751)
chr2 (211-346)||(15085770-15085911)
chr2 (258-379)||(1270394-1270521)
chr2 (198-376)||(35325271-35325456)
chr2 (199-331)||(45098218-45098355)
chr2 (266-379)||(17333936-17334055)
chr2 (311-379)||(22356179-22356247)
chr2 (291-379)||(23748250-23748338)
chr2 (172-284)||(36052118-36052230)
chr2 (257-392)||(22355963-22356093)
chr2 (314-379)||(35736365-35736430)
chr2 (315-379)||(35736176-35736240)
chr2 (311-379)||(36347716-36347784)
chr2 (256-379)||(41778774-41778902)
chr2 (249-379)||(15224802-15224937)
chr2 (249-378)||(16713494-16713628)
chr2 (297-379)||(42813781-42813863)
chr2 (211-288)||(8554369-8554446)
chr2 (184-289)||(9313079-9313188)
chr2 (335-379)||(17379847-17379891)
chr2 (214-345)||(21502067-21502204)
chr2 (250-371)||(886927-887051)
chr2 (311-378)||(36046377-36046443)
chr2 (267-376)||(23739882-23739996)
chr2 (177-279)||(42813726-42813828)
chr2 (311-379)||(887285-887352)
chr2 (311-377)||(31795772-31795838)
chr2 (316-376)||(2380996-2381057)
chr2 (338-379)||(17380043-17380084)
chr2 (311-388)||(45257482-45257559)
chr2 (311-379)||(9631735-9631803)
chr2 (316-375)||(8427051-8427110)
chr2 (286-345)||(14196819-14196878)
chr2 (319-374)||(31061543-31061598)
chr2 (297-384)||(33265767-33265845)
chr2 (312-378)||(9426987-9427053)
chr2 (312-378)||(41841684-41841750)
chr2 (313-378)||(8426881-8426946)
chr2 (311-380)||(36046204-36046273)
chr2 (311-379)||(36347542-36347610)
chr2 (335-379)||(40022364-40022407)
chr2 (311-378)||(2241413-2241479)
chr2 (342-377)||(12541773-12541808)
chr2 (337-372)||(15224153-15224188)
chr2 (340-379)||(31795968-31796007)
chr2 (287-378)||(40022524-40022615)
chr2 (317-379)||(17331416-17331478)
chr2 (176-290)||(31795804-31795918)
chr2 (347-377)||(36567063-36567093)
chr2 (340-377)||(19567020-19567057)
chr2 (331-379)||(8554446-8554494)
chr2 (178-234)||(14187111-14187167)
chr2 (215-247)||(22356141-22356173)
[»] chr3 (60 HSPs)
chr3 (151-379)||(41414079-41414313)
chr3 (152-341)||(40858604-40858798)
chr3 (178-374)||(16884010-16884209)
chr3 (196-374)||(10943669-10943852)
chr3 (176-345)||(34641027-34641199)
chr3 (196-376)||(17474261-17474446)
chr3 (199-377)||(21090129-21090312)
chr3 (151-345)||(48683647-48683848)
chr3 (218-379)||(44412362-44412528)
chr3 (196-379)||(24253722-24253911)
chr3 (167-378)||(42772046-42772250)
chr3 (176-375)||(26135807-26136006)
chr3 (180-368)||(18086019-18086218)
chr3 (297-378)||(44412522-44412603)
chr3 (177-339)||(8432297-8432462)
chr3 (218-345)||(46978462-46978594)
chr3 (226-379)||(27197734-27197892)
chr3 (198-345)||(42699669-42699821)
chr3 (297-379)||(34641151-34641233)
chr3 (336-469)||(12790296-12790417)
chr3 (287-379)||(24560218-24560310)
chr3 (311-379)||(28582684-28582752)
chr3 (300-379)||(5961933-5962011)
chr3 (297-379)||(24253883-24253965)
chr3 (212-315)||(36727242-36727349)
chr3 (311-376)||(55428554-55428619)
chr3 (287-379)||(220548-220640)
chr3 (298-378)||(26135959-26136039)
chr3 (312-389)||(6803377-6803454)
chr3 (313-374)||(27541937-27541998)
chr3 (151-379)||(30200098-30200338)
chr3 (311-384)||(41110496-41110569)
chr3 (144-374)||(54985696-54985943)
chr3 (337-377)||(18654802-18654842)
chr3 (312-379)||(24560393-24560460)
chr3 (311-378)||(41110323-41110390)
chr3 (345-379)||(37102348-37102382)
chr3 (326-379)||(5903550-5903603)
chr3 (312-377)||(28581189-28581254)
chr3 (211-272)||(55428492-55428553)
chr3 (311-379)||(21773783-21773851)
chr3 (307-359)||(25654991-25655043)
chr3 (335-379)||(25655171-25655215)
chr3 (340-376)||(31664391-31664427)
chr3 (340-376)||(31931969-31932005)
chr3 (147-235)||(37102155-37102243)
chr3 (343-379)||(54574563-54574599)
chr3 (344-379)||(651741-651776)
chr3 (320-379)||(8432262-8432321)
chr3 (340-375)||(9312673-9312708)
chr3 (312-375)||(14897981-14898044)
chr3 (311-378)||(23028101-23028168)
chr3 (311-362)||(52474090-52474141)
chr3 (342-376)||(10748299-10748333)
chr3 (337-379)||(36568905-36568947)
chr3 (348-381)||(40858767-40858800)
chr3 (256-376)||(46204890-46205015)
chr3 (342-378)||(14897897-14897933)
chr3 (335-379)||(18654601-18654645)
chr3 (311-375)||(52473920-52473984)
[»] scaffold0026 (2 HSPs)
scaffold0026 (211-384)||(1467-1646)
scaffold0026 (296-377)||(1175-1256)
[»] scaffold0119 (2 HSPs)
scaffold0119 (196-379)||(37384-37572)
scaffold0119 (258-379)||(30716-30843)
[»] scaffold0071 (1 HSPs)
scaffold0071 (146-379)||(52897-53122)
[»] scaffold0007 (2 HSPs)
scaffold0007 (176-290)||(242311-242425)
scaffold0007 (297-376)||(242377-242456)
[»] scaffold0012 (2 HSPs)
scaffold0012 (196-345)||(184636-184796)
scaffold0012 (313-376)||(184784-184847)
[»] scaffold0067 (2 HSPs)
scaffold0067 (287-388)||(39341-39442)
scaffold0067 (311-379)||(39187-39256)
[»] scaffold1414 (1 HSPs)
scaffold1414 (214-325)||(355-473)
[»] scaffold0198 (1 HSPs)
scaffold0198 (312-377)||(3150-3215)
[»] scaffold0096 (1 HSPs)
scaffold0096 (312-379)||(6585-6652)
[»] scaffold0240 (2 HSPs)
scaffold0240 (196-285)||(17640-17729)
scaffold0240 (312-379)||(17716-17781)
[»] scaffold0262 (1 HSPs)
scaffold0262 (307-379)||(16297-16369)
[»] scaffold0027 (1 HSPs)
scaffold0027 (296-378)||(121987-122068)
[»] scaffold0006 (1 HSPs)
scaffold0006 (228-276)||(81498-81546)


Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 274
Target Start/End: Complemental strand, 44146100 - 44145842
Alignment:
Q  16 aaaataagtcttaagctacgagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagatacatgatagtactacttttaa 115  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44146100 aaaagaagtcttaagctaagagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagatacatgatagtactacctttaa 44146001  T
Q  116 ttacttatattaattctttttgacttactttattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacat 215  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44146000 ttacttatattaattctttttgacttactttattaagggtgtatttggaaagagggtttaggaggggagggcttacattccttttttaatttaaagacat 44145901  T
Q  216 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 274  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  44145900 tataaaatgatttttaaaaaattgaattaacagcattataaatgatcatgtaatacttc 44145842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 149 - 378
Target Start/End: Complemental strand, 55080815 - 55080581
Alignment:
Q  149 taagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacag 248  Q
    |||||||||||||||   |||||||||||| |||||| ||||| || ||||||||| |||   |||||||||||| ||||||| |||||| ||||||||     
T  55080815 taagggtgtgtttggatggagggtttaggatgggaggacttacttttcttttttaaattacgaacattataaaataatttttagaaaatttaattaacaa 55080716  T
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| |||||||||  ||||||||||||||||||||     ||| |||| |||||||||||||||||||||||| ||||||||| ||| || || |||    
T  55080715 catgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttcgtaatttacaaaataaaaatgaaccatctcct 55080616  T
Q  344 cccttcccctcctaaaccctcaatccaaacacacc 378  Q
    | ||||| |||||||||||||||||||||||||||    
T  55080615 ctcttcctctcctaaaccctcaatccaaacacacc 55080581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 148 - 379
Target Start/End: Original strand, 17182490 - 17182728
Alignment:
Q  148 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgattttta--aaaaattgaattaa 245  Q
    |||| |||||||||||  ||||| |||||||||||| |  |||| || ||||||||| |||  ||| ||||||||||||||||   ||||||||||||||    
T  17182490 ttaaaggtgtgtttggatagaggttttaggaggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaattgaattaa 17182589  T
Q  246 cagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 340  Q
    ||  ||||| ||||||||| |||||||||||||||||||||||||     |||| | ||||||| |||||||||||||||||||||||||| || |||||    
T  17182590 caatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaatattttaccttgttcgtaatttaaaaaataaaagtaagtcctcc 17182689  T
Q  341 cctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    | ||| |||||||| ||||||||||||||||||||||||    
T  17182690 cttcctttcccctcataaaccctcaatccaaacacaccc 17182728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 154 - 379
Target Start/End: Complemental strand, 22186950 - 22186720
Alignment:
Q  154 gtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatga 253  Q
    ||||||||||   |||||||||  |||||||| || || || ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||    
T  22186950 gtgtgtttggatggagggtttaaaaggggaggactcacttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatga 22186851  T
Q  254 tcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccctt 348  Q
    | |||||| || |||||||||||||||||     ||| |||||||| ||||||||| ||||| |||||||||||| ||||||||| | || |||||||||    
T  22186850 taaatgattatataatacttcaaaaacactttatttattttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactctgccctccctt 22186751  T
Q  349 cccctcctaaaccctcaatccaaacacaccc 379  Q
    ||| |||||||||||||||||||| ||||||    
T  22186750 cccttcctaaaccctcaatccaaatacaccc 22186720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 176 - 385
Target Start/End: Original strand, 7977530 - 7977746
Alignment:
Q  176 ggaggggagggcttacattcctttttt-aatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 274  Q
    |||||||||||||||| || ||||||| || |||   |||||||||||| || |||  ||||||||||||||| |||||| ||||||||| |||||||||    
T  7977530 ggaggggagggcttacttttctttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatgataaatgatcatataatacttc 7977629  T
Q  275 aaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatc 368  Q
    ||||||| ||||||||      |||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  7977630 aaaaacaattaatttactttaaaaaaaacattttacattcttcgtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatc 7977729  T
Q  369 caaacacacccataaag 385  Q
    ||||||||||| |||||    
T  7977730 caaacacacccttaaag 7977746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 151 - 379
Target Start/End: Complemental strand, 56135965 - 56135750
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 250  Q
    |||||||||||||   ||||||||||||||||||||||||| || ||||||||| ||||||               ||||| |||||||||||||||       
T  56135965 agggtgtgtttggatggagggtttaggaggggagggcttacttttcttttttaaattaaag---------------ttttagaaaattgaattaaca--- 56135884  T
Q  251 tgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    |||| ||||||||| |||||||||||||||||||||||||     |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  56135883 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcc 56135784  T
Q  346 cttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||||||||    
T  56135783 cttcccctcctaaaccctcaatccaaacacaccc 56135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 151 - 341
Target Start/End: Complemental strand, 43961644 - 43961449
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 250  Q
    |||||||||||||   ||||| ||| ||||||||||||||  || ||||||||| |||   |||||||||||||||||||| |||||||||||| || ||    
T  43961644 agggtgtgtttggatggagggattatgaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaaca 43961545  T
Q  251 tgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 341  Q
    |||| ||||||||| |||||||||||||||||||||     |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  43961544 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataatttaaaaaataaaagtgagccctccc 43961449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 176 - 386
Target Start/End: Complemental strand, 37761673 - 37761459
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||||||| | || ||||||||| |||  |||||||| |||||||||||| ||||||||||||||| |||||| |||||| || ||| ||||||    
T  37761673 ggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttca 37761574  T
Q  276 aaaacacttaattta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaa 371  Q
    |||||||||||||||    |||| | ||||||  |||||||||||||||||| ||||||||| | || |||||| ||| |||||||||| ||||||||||    
T  37761573 aaaacacttaatttattctaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaa 37761474  T
Q  372 acacacccataaagt 386  Q
    |||||||| ||||||    
T  37761473 acacacccttaaagt 37761459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 176 - 378
Target Start/End: Original strand, 47846090 - 47846298
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||| | |||| || ||||||||| ||   ||||||||||||| ||||||| ||||||||||||| | |||||| ||| ||||| ||||||||||    
T  47846090 ggaggggagagtttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatgataaataatcatataatacttca 47846189  T
Q  276 aaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 369  Q
    |||||||||||||||      |||| ||| |||||||||||| ||||||||||||||||||| | ||||||| ||||||| |||| ||||||||||||||    
T  47846190 aaaacacttaatttattttaaaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatcc 47846289  T
Q  370 aaacacacc 378  Q
    |||||||||    
T  47846290 aaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 54576362 - 54576572
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||||||||| || ||||||||  |||  |||||||||||||||||| || ||||||||||||||| | |||| |||||| || ||||||||||    
T  54576362 ggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaattaacaacgtgataaatgattatataatacttca 54576461  T
Q  276 aaaacacttaattt-------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatc 368  Q
    |||||| |||||||       ||||| ||||||||| |||||||||||||||||| ||||||||| | || | ||||||||| ||| |||||||| ||||    
T  54576462 aaaacatttaatttatttaaaaaaaaaacattttacgttgttcgtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatc 54576561  T
Q  369 caaacacaccc 379  Q
    |||||||||||    
T  54576562 caaacacaccc 54576572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 196 - 379
Target Start/End: Original strand, 29993826 - 29994014
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----tta 290  Q
    ||||||||| |||  |||| |||||||||||||||| ||||||||||||||| ||||||  ||||| || |||||||||||||| |||||||     |||    
T  29993826 cttttttaaattacggacactataaaatgatttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaatacttaatctatttta 29993925  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| || ||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||| ||| |||| |||| |||||    
T  29993926 aaaaaactttttacattgttcgtaatttaaaaagtaaaagtgaaccctcccctccatttccctcctaaatccttaatctaaactcaccc 29994014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 4437480 - 4437633
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 291  Q
    ||||||||| |||  || |||||||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||||||||| |||||         
T  4437480 cttttttaaattatggatattataaaatgatttttaaaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttgatttattttt 4437579  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    ||| |||||||||||||||  ||||||||||||||||| ||| |||||||||||    
T  4437580 aaaaacattttacattgtttttaatttaaaaaataaaaatgaaccctcccctcc 4437633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 379
Target Start/End: Complemental strand, 5825085 - 5824902
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaag 295  Q
    ||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||    || |||    ||| |||||| |     
T  5825085 cttttttgaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataaccaatccaaacattttattttaaacaa 5824986  T
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||  ||| | ||||| ||| |||||||||||||||||||||||    
T  5824985 acattttacatttttcgtaatttaaaaaataaaaatgagcactaaccttcattcccttccaaaaccctcaatccaaacacaccc 5824902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 197 - 379
Target Start/End: Complemental strand, 51329983 - 51329797
Alignment:
Q  197 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 291  Q
    |||||||| |||  || |||||||||| |||| || |||||||||||||||  ||||| |||||| || |||||||||||||| ||||||||||     |    
T  51329983 ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatgataaatgattatataatacttcaaaaa-acttaatttattttaa 51329885  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||| |||||||   |||||||||||||||||| ||||| ||| | |||| ||  ||||||||||||||| ||||||||||||||||||    
T  51329884 aaaaacattttgtgttgttcgtaatttaaaaattaaaattgaactctcctctttcttcccctcctaaactctcaatccaaacacaccc 51329797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 379
Target Start/End: Original strand, 21694929 - 21695131
Alignment:
Q  180 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaa 279  Q
    |||||||||||| || ||||||||| |||  |||| ||||||||| ||||||| |||||||| |||||  ||||| ||||||||| |||||||||||  |    
T  21694929 gggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgat-aatgatcatataatacttcaatca 21695027  T
Q  280 cacttaattt----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||||||    ||||| | |  ||| ||||| | |||||||||| | |||||| | |||||| || |||||||||| ||||||| ||||||||||||    
T  21695028 cacttaatttattaaaaaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttccttcccctcataaacccccaatccaaacac 21695127  T
Q  376 accc 379  Q
    ||||    
T  21695128 accc 21695131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 54001162 - 54001289
Alignment:
Q  197 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacac------ttaattta 290  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||   |||||| ||||||||| |||||||||||||||||      ||| ||||    
T  54001162 ttttttaaattacggacattataaaataatttttaaaaaattgaattaa---catgataaatgatcatataatacttcaaaaacacttttatttatttta 54001258  T
Q  291 aaaagacattttacattgttcgtaatttaaa 321  Q
    ||||||||||||||||||||||| |||||||    
T  54001259 aaaagacattttacattgttcgtgatttaaa 54001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 49735557 - 49735469
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| |  |||| |||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49735557 aaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 187 - 378
Target Start/End: Complemental strand, 34995247 - 34995052
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 286  Q
    ||||| || ||||||||| |||  || ||||| |||||||||||| |||||||||||||   |||||| ||| ||| | |||||||||||||||||||||    
T  34995247 cttacttttcttttttaaattacggatattatcaaatgatttttagaaaattgaattaaa--catgataaataatcttataatacttcaaaaacacttaa 34995150  T
Q  287 tttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgag-ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||      ||| |||||| |||||||||||||||||||||||||||||| | |  |||| |||||||| |||  || |||||||| ||||||||||    
T  34995149 tttattttagaaaaacatttcacattgttcgtaatttaaaaaataaaagtgtgtcattcccttcccttcctctctcaacccctcaattcaaacacacc 34995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 44145844 - 44145774
Alignment:
Q  309 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  44145844 ttcgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccc 44145774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 44155971 - 44156052
Alignment:
Q  16 aaaataagtcttaagctacgagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagataca 97  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||||    
T  44155971 aaaagaagtcttaagctacgagaattcacaagaaagttggtaaaatcactaaaatggggaatatgaattaaaagtagataca 44156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 54935161 - 54935068
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc-tcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||| |||| ||| || ||||||||||||||||| |||||| | |||||||| |||||||||||||||||||||||||||||||||||||    
T  54935161 tttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccc 54935068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 9030391 - 9030272
Alignment:
Q  210 agacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacatttta 303  Q
    |||||||||||||||||||||| |||||| |||||| |  ||||| |||||| || |||||||| ||||||||||||||||      |||| ||||||||    
T  9030391 agacattataaaatgatttttagaaaatttaattaataaaatgataaatgattatataatactttaaaaacacttaatttattgtttaaaaaacatttta 9030292  T
Q  304 cattgttcgtaatttaaaaa 323  Q
    | ||||||||||||||||||    
T  9030291 cgttgttcgtaatttaaaaa 9030272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 46007879 - 46007942
Alignment:
Q  314 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 216 - 376
Target Start/End: Complemental strand, 55510338 - 55510173
Alignment:
Q  216 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgtt 310  Q
    |||||||| ||||| ||||||||||| ||||| |||||| ||||||||| ||||||||||   ||||||||     |||||||| ||||||||||||||     
T  55510338 tataaaat-attttaaaaaaattgaaataacaacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtc 55510240  T
Q  311 cgtaatttaaaaaataaaagtgagccctcccct-cccttcccctcctaaaccctcaatccaaacaca 376  Q
      ||| |||||||  |||||| || |||||||| ||||||||  ||||| |||||||||||||||||    
T  55510239 tttaaattaaaaatgaaaagtaagtcctcccctccccttccctccctaacccctcaatccaaacaca 55510173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 35543448 - 35543537
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||| | |||||||  |||||||||||| |||||||||||||||| ||||| ||  |||||||| |||||||||||||||||||||    
T  35543448 tttaaaaaaatattttactatgttcgtaattttaaaaataaaagtgagctctcccatcatttcccctcataaaccctcaatccaaacaca 35543537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 377
Target Start/End: Complemental strand, 51074459 - 51074344
Alignment:
Q  269 tacttcaaaaacacttaattta-------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 361  Q
    ||||||||||||||||||||||       |||| ||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||| |    
T  51074459 tacttcaaaaacacttaatttattaaaaaaaaaaacactttacaatgttcataatttaaaaaataaaagtgagccctcccgtcctttctcctcctaaatc 51074360  T
Q  362 ctcaatccaaacacac 377  Q
    || || ||||||||||    
T  51074359 cttaacccaaacacac 51074344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 54576410 - 54576329
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||| | ||| |||||| ||||||| |||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  54576410 cattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 315 - 379
Target Start/End: Original strand, 31348500 - 31348564
Alignment:
Q  315 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccc 31348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 290 - 378
Target Start/End: Original strand, 47846417 - 47846505
Alignment:
Q  290 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||| ||| |||||||||||| ||||||||||||||||||| | || |||  ||||||| |||| |||||||||||||||||||||||    
T  47846417 aaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccttcctttcccttctcctcttaaaccctcaatccaaacacacc 47846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 54320609 - 54320677
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  54320609 cgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 54320677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 379
Target Start/End: Original strand, 47433734 - 47433952
Alignment:
Q  167 gagggtttaggagggga-gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatg 265  Q
    ||||||||||||||||| ||| |||  || | ||||||| |||  ||||||||  |||| ||||||||||||| || ||| | ||| || || ||||||     
T  47433734 gagggtttaggaggggaagggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat-ataaacgatcata 47433832  T
Q  266 taatacttcaaaaacacttaattta-----aaaagacattttac-attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaa 359  Q
    |||||||||||  ||||||||||||     |||| |||| |||  || ||  ||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  47433833 taatacttcaatcacacttaatttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaa 47433932  T
Q  360 ccctcaatccaaacacaccc 379  Q
    || |||| ||||||||||||    
T  47433933 ccgtcaacccaaacacaccc 47433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 384
Target Start/End: Complemental strand, 29798410 - 29798284
Alignment:
Q  259 gatcatgtaatacttcaaaaacacttaatttaa-aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctccta 357  Q
    |||||| |||||||||||  |||||| |||||| ||| |||| ||| || ||  |||||||||||||||||||| | |  ||| ||| ||||||||||||    
T  29798410 gatcatataatacttcaatcacacttgatttaagaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctccta 29798311  T
Q  358 aaccctcaatccaaacacacccataaa 384  Q
    |||| ||||||||||||||||| ||||    
T  29798310 aaccatcaatccaaacacacccttaaa 29798284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 376
Target Start/End: Complemental strand, 27735881 - 27735749
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| ||||||||| |||||||||||  ||||||||||||     |||| |||| ||| || || |||||||||||||  |||| | | ||||| | |    
T  27735881 catgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctctt 27735782  T
Q  344 cccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||||||||||| |||||||||||    
T  27735781 cccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 49735691 - 49735735
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  49735691 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 54935244 - 54935312
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||| | | |||||||||||||||||||||||||||||| ||||||||||||||    
T  54935244 cgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 54935312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 148 - 282
Target Start/End: Complemental strand, 11089756 - 11089619
Alignment:
Q  148 ttaagggtgtgtttgggaagagggtttaggaggggagg---gcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaatta 244  Q
    ||||||||||||||||   |||| ||||| |||||| |   | ||||||| ||||||||| |||  ||| |||||||||  |||||| ||||||||||||    
T  11089756 ttaagggtgtgtttggattgaggatttagaaggggaagatggtttacatttcttttttaaattacggactttataaaatattttttagaaaattgaatta 11089657  T
Q  245 acagcatgatcaatgatcatgtaatacttcaaaaacac 282  Q
    ||| ||| || ||||||||| || ||||||||||||||    
T  11089656 acaacatcataaatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 16400862 - 16400803
Alignment:
Q  318 taaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||||| |||||    
T  16400862 taaaaaataaaagtgaatcctcccctcccttctcctcctaaaccctcaatccaatcacac 16400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 21694973 - 21694906
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctc 364  Q
    ||||||| | ||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  21694973 cattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccctc 21694906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 27735900 - 27735987
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||| |||||||| | ||| |||||||||||||  |||| ||| ||||  |||||||||||||||||||||||| |||||||||||||    
T  27735900 aaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 14539445 - 14539367
Alignment:
Q  212 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 290  Q
    ||||||||||||| || ||| |||||| |||||| | ||| || ||||||||| |||||||||||||||||||||||||    
T  14539445 acattataaaatgtttgttagaaaattaaattaagaacataataaatgatcatataatacttcaaaaacacttaattta 14539367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 37711183 - 37711133
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaag 385  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  37711183 ccctcccttcccttcccctcctaaaccctcaatccaaacacacccttaaag 37711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 379
Target Start/End: Original strand, 37711285 - 37711366
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||| |||||||||||||  |||  | | |||||||||||||||||||||||||||||| ||||||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 37711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 1968534 - 1968602
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||| | | | || ||||||||||||||||||||||||||||||||||||||||    
T  1968534 cgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccc 1968602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 6938422 - 6938490
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||||| ||||||||||| |||||||| |||||| || ||||||||||||||    
T  6938422 cgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccc 6938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 379
Target Start/End: Original strand, 17938164 - 17938351
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 291  Q
    ||||||| |||  ||||||||  |||| |||||||||| || || ||| | |||||| || |||||| |||||||||||  ||||||||||||      |    
T  17938164 tttttaaattatggacattatggaatgttttttaaaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttatttaaaa 17938263  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||| | || ||| || ||| ||||||||||||| |||||| | | |||  ||||||||||||||||||  ||||||||||||| ||||    
T  17938264 aaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatctcccttcccctcctaaattctcaatccaaacataccc 17938351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 29993854 - 29993774
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||| | ||| |||||||||||||| ||||  ||| ||||| ||| |||||||||||||||||| |||||||||||||    
T  29993854 cattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccactcacttcccctcctaaacccttaatccaaacacac 29993774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 44156147 - 44156207
Alignment:
Q  97 atgatagtactacttttaattacttatattaattctttttgacttactttattaagggtgt 157  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  44156147 atgatagtattacctttaattacttatattaattctctttgacttattttattaagagtgt 44156207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 26167005 - 26166938
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| ||||   | | ||||||||| |||||||||||||||||||||||||||||||||    
T  26167005 gtaatttaaaaaagaaaaacaaactctcccctccattcccctcctaaaccctcaatccaaacacaccc 26166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 35565612 - 35565565
Alignment:
Q  326 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 373  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  35565612 aaaagtaagccctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 2247977 - 2248043
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||| |||||| | | ||||| || |||| ||||||||||||||||||||||||||||    
T  2247977 gtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacacc 2248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 37761641 - 37761707
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| |||||  |||||||||||||||||||||  |||| |||| ||||||||||||||    
T  37761641 taatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccc 37761707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 51075268 - 51075218
Alignment:
Q  214 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcat 264  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatgataaatgatcat 51075218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 41174547 - 41174588
Alignment:
Q  338 tcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccc 41174588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 41227614 - 41227518
Alignment:
Q  251 tgatcaatgatcatgtaatacttcaaaaacacttaattta--aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    |||| ||||||||| |||||||||||  |||||||||||   ||| ||||||||| ||||||| |||||||||||| | |||| |||||| ||||||    
T  41227614 tgataaatgatcatataatacttcaatcacacttaattttttaaatgacattttatattgttcataatttaaaaaagagaagtaagccctgccctcc 41227518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 379
Target Start/End: Original strand, 45132610 - 45132738
Alignment:
Q  250 atgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttc 349  Q
    ||||| || |||||| |||||||||||  ||||||||||||     |||| ||| || || |||||||||||||| |||||| | || || |||| ||||    
T  45132610 atgataaacgatcatataatacttcaatcacacttaatttatttt-acatattatatagtccgtaatttaaaaaagaaaagtaaaccatctcctctcttc 45132708  T
Q  350 ccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| |||||| |||||||||||    
T  45132709 ccctcctaaactctcaattcaaacacaccc 45132738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 5731032 - 5731072
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 34995224 - 34995292
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| || | | ||||| |||||| |||||||||||||||| ||||||||||    
T  34995224 cgtaatttaaaaaagaaaagtaagtcttaccctcacttcccttcctaaaccctcaatctaaacacaccc 34995292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 45741959 - 45741891
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| |  |||| | | | |||||||||||||||||||||||||||||||||    
T  45741959 cgtaatttaaaaaacaaaagtaaatcctcacattcattcccctcctaaaccctcaatccaaacacaccc 45741891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 379
Target Start/End: Complemental strand, 53260759 - 53260719
Alignment:
Q  339 cccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccc 53260719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 54320475 - 54320431
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  54320475 ccctccctttccctcctaaaccctcaatccaaacacacccttaaa 54320431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 375
Target Start/End: Complemental strand, 34110840 - 34110803
Alignment:
Q  338 tcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  34110840 tcccctctcttcccctcctaaaccctcaatccaaacac 34110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 377
Target Start/End: Complemental strand, 4437492 - 4437428
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||| |||| | || | ||||||||||| || |||||||||||| ||||||||||||    
T  4437492 taatttaaaaaagaaaaataagtcatcccctccctttccatcctaaaccctccatccaaacacac 4437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 45742065 - 45742133
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | | |||||||||||| ||| ||||||||||  ||||||||||||||    
T  45742065 cgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacaccc 45742133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 379
Target Start/End: Complemental strand, 41174388 - 41174357
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||||||    
T  41174388 tcccctcctaaaccctcaatccaaacacaccc 41174357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 7977578 - 7977520
Alignment:
Q  298 attttacattgttcgtaatttaaaaaat-aaaagtgagccctcccctcccttcccctcc 355  Q
    |||||| | ||||||||||||||||||  |||||| |||||||||||||||| ||||||    
T  7977578 attttataatgttcgtaatttaaaaaaagaaaagtaagccctcccctccctttccctcc 7977520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 35543333 - 35543411
Alignment:
Q  167 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 245  Q
    ||||||||| || |||||  ||||  || ||||||||| |||   |||||||||||| |||||||||||||||||||||    
T  35543333 gagggtttaagaagggagaacttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 379
Target Start/End: Complemental strand, 27775617 - 27775584
Alignment:
Q  346 cttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||| ||||    
T  27775617 cttcccctcctaaaccctcaatccaaacaaaccc 27775584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 31348390 - 31348317
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctc-----ctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |||| |||||||||||||||     |||||||||| ||||||||||||||    
T  31348390 cgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaactaaaccctccatccaaacacaccc 31348317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 47694403 - 47694350
Alignment:
Q  326 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| |||||||||||||||||| |||| ||| |||| ||||||||| ||||    
T  47694403 aaaagtaagccctcccctcccttccgctccaaaatcctccatccaaacataccc 47694350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 5730875 - 5730831
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| || ||| ||||||||||||||| ||||||||||||||    
T  5730875 ccctcccatctctttccctcctaaaccctccatccaaacacaccc 5730831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 11842325 - 11842401
Alignment:
Q  157 tgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaa 233  Q
    |||||||  ||||||||||| |||||||| ||||| || |||||| || ||| ||||| ||||||||  ||||||||    
T  11842325 tgtttggatagagggtttagaaggggaggacttacttttctttttcaaattacagacactataaaatattttttaaa 11842401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 24565415 - 24565347
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | ||||||||   |||||| ||||||||| || ||||||||||||||    
T  24565415 cgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacaccc 24565347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 32192891 - 32192847
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcc 340  Q
    |||||||||||| ||  ||||||||||||||||||||| ||||||    
T  32192891 acattttacattattgataatttaaaaaataaaagtgaaccctcc 32192847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 49735667 - 49735695
Alignment:
Q  336 cctcccctcccttcccctcctaaaccctc 364  Q
    |||||||||||||||||||||||||||||    
T  49735667 cctcccctcccttcccctcctaaaccctc 49735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 12022178 - 12022386
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||||||||| || ||||||||| |||   |||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  12022178 ggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttca 12022277  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12022278 aaaacacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatcca 12022377  T
Q  371 aacacaccc 379  Q
    |||||||||    
T  12022378 aacacaccc 12022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 148 - 345
Target Start/End: Complemental strand, 39449546 - 39449339
Alignment:
Q  148 ttaagggtgtgtttgggaagagggtttaggaggggaggg-----cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaat 242  Q
    |||||||||||||||||||||| ||||||||||||||||     ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39449546 ttaagggtgtgtttgggaagagagtttaggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaat 39449447  T
Q  243 taacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccc 337  Q
    ||||| |||||| ||||||||| |||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  39449446 taacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgttcgtaatttaaaaaataaaagtgagctc 39449347  T
Q  338 tcccctcc 345  Q
    ||| ||||    
T  39449346 tcctctcc 39449339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 187 - 379
Target Start/End: Original strand, 8815187 - 8815384
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactt-a 285  Q
    ||||| || ||||||||| |||  ||||||||||||||||||||| |||||||||| |||| |||||| |||||| || ||||||||||||||||||| |    
T  8815187 cttacttttcttttttaaattacggacattataaaatgatttttagaaaattgaatcaacaacatgataaatgattatataatacttcaaaaacacttta 8815286  T
Q  286 attta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||    |||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  8815287 atttatttgaaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccc 8815384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 176 - 379
Target Start/End: Complemental strand, 43732896 - 43732680
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||  |||||||||||||||  ||||| ||||||||| ||||||||||    
T  43732896 ggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttca 43732797  T
Q  276 aaaacacttaattta-------------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccc 362  Q
    |||||||||||||||             |||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  43732796 aaaacacttaatttattttttttaaaaaaaaaaacattttacattgttagtaatttaaaaaataaaagtgagtcctcctctcccttcccctcctaaaccc 43732697  T
Q  363 tcaatccaaacacaccc 379  Q
    |||||||||||||||||    
T  43732696 tcaatccaaacacaccc 43732680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 176 - 379
Target Start/End: Complemental strand, 30365339 - 30365131
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||||||| | || ||||||||| ||| ||||||||| |||||||||||| ||||||||||||||| |||||| |||||| || ||| ||||||    
T  30365339 ggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttca 30365240  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||| | ||||||  |||||||||||||||||| ||||||||| | ||||||||| ||| ||||||||||||||||||||    
T  30365239 aaaacacttaatttattctaaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatcca 30365140  T
Q  371 aacacaccc 379  Q
    |||||||||    
T  30365139 aacacaccc 30365131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 198 - 378
Target Start/End: Complemental strand, 16024341 - 16024155
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 291  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||      |    
T  16024341 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaa 16024242  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||  ||||||| |||||||||||||||||||  |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  16024241 aaaatcattttatattgttcgtaatttaaaaacaaaaactgagctctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 151 - 377
Target Start/End: Original strand, 20472702 - 20472933
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 250  Q
    |||||||||||||  |||||| ||| ||||| ||||||||| || ||||||||| ||| |||||||||||||| | ||||| |||||||||||||||  |    
T  20472702 agggtgtgtttggatagagggattaagagggaagggcttacttttcttttttaaattacagacattataaaataaattttagaaaattgaattaacaata 20472801  T
Q  251 tgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    ||||  |||||||| ||||||||||||||||||| |||||     |||| |||  |||||||||||||||||||||||||||||||||| ||| || |||    
T  20472802 tgatatatgatcatataatacttcaaaaacacttgatttatttttaaaaaacaacttacattgttcgtaatttaaaaaataaaagtgagtccttccttcc 20472901  T
Q  346 cttcccctcctaaaccctcaatccaaacacac 377  Q
    ||| |||| ||||||| |||||||||||||||    
T  20472902 ctttcccttctaaaccttcaatccaaacacac 20472933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 172 - 379
Target Start/End: Complemental strand, 9933454 - 9933241
Alignment:
Q  172 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 271  Q
    ||||||||||||||| |||| || |||||||||  |   ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||     
T  9933454 tttaggaggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaacatgataaatgatcatataatat 9933355  T
Q  272 ttcaaaaacacttaattt------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 365  Q
    |||||||| |||||||||      ||||| | ||||||||||||||||||||||||| ||||||||||   || |||||| ||| ||||||||||| |||    
T  9933354 ttcaaaaatacttaatttattttgaaaaaaatattttacattgttcgtaatttaaaatataaaagtgaattcttccctcctttctcctcctaaaccttca 9933255  T
Q  366 atccaaacacaccc 379  Q
    ||||||||||||||    
T  9933254 atccaaacacaccc 9933241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 217 - 379
Target Start/End: Complemental strand, 43826500 - 43826333
Alignment:
Q  217 ataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttc 311  Q
    ||||||| ||||||| ||||||||||||||| |||||| |||||||||  |||||||||||||||||||| |||     |||| ||||||||||||||||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttc 43826401  T
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||||||||| ||| | ||||||||| ||||||||||||| |||||||| ||||||||||    
T  43826400 gtaatttacaaaataaaaatgaactctcccctccattcccctcctaaatcctcaatctaaacacaccc 43826333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 179 - 372
Target Start/End: Complemental strand, 34196514 - 34196316
Alignment:
Q  179 ggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaa 278  Q
    ||||||||||||| || |||||| |||| | |||||||||||||||||||||| ||||||||||||||| || ||| || |||||| |||||||||||||    
T  34196514 ggggagggcttacttttctttttaaatt-acagacattataaaatgatttttagaaaattgaattaacaacaagataaacgatcatataatacttcaaaa 34196416  T
Q  279 acactta---attt----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaa 371  Q
    |||||||   ||||    ||||| ||| || ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||||    
T  34196415 acacttatttatttaaaaaaaaaaacacttcacattgttcgtaatttaaaaaattaaagtga-cccccccctcccttcccctcctgatccctcaatccaa 34196317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 198 - 379
Target Start/End: Original strand, 8671849 - 8672037
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatg--atcaatgatcatgtaatacttcaaaaacacttaa-----ttta 290  Q
    ||||||| |||  ||||||||||||||||||||| |||||||||||||||  |||  |  ||||||||| |||||||||||||| ||||||     ||||    
T  8671849 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttta 8671948  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||||||| || |||||||||||||||||| | || | |||||| ||||||||| ||||| |||||||||||||||||||    
T  8671949 aaaatacattttacattatttgtaatttaaaaaataaaattaagtcatcccctaccttccccttctaaatcctcaatccaaacacaccc 8672037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 219 - 379
Target Start/End: Original strand, 9434377 - 9434542
Alignment:
Q  219 aaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aaaaagacattttacattgttcg 312  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| || ||||||||||||| ||||||||||      ||||| ||||||||||||||||     
T  9434377 aaaataatttttaaaaaattgaattaacaacatgataaatgataatataatacttcaaaaccacttaatttattaaaaaaaaaacattttacattgttcc 9434476  T
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||| | || || ||  || ||||| ||||||||||||||||||||||||    
T  9434477 taatttaaaaaataaaagtgaactcttccatctatt-ccctcgtaaaccctcaatccaaacacaccc 9434542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 379
Target Start/End: Original strand, 40633059 - 40633231
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttaca 305  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||| ||||||  | ||||| |||||||||||||||||||     |||  |||||||||     
T  40633059 gacattataaaataatttttagaaaattgaattaacaacatgataaatgattgtataatatttcaaaaacacttaatttattttaaaacaacattttacg 40633158  T
Q  306 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| ||||| ||||| ||| || ||| || ||||||| ||| |||||||||||||||||||||||    
T  40633159 ttgttcgtaattgaaaaattaaaattgaacc-tccgcttccttcccttccgaaaccctcaatccaaacacaccc 40633231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 213 - 377
Target Start/End: Complemental strand, 6453356 - 6453185
Alignment:
Q  213 cattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa------tttaaaaagacattttacat 306  Q
    ||||||||||||||||||| ||||||||||||| | |||||| | | ||||| |||||||||||||||||||||      || ||||| | |||||||||    
T  6453356 cattataaaatgatttttagaaaattgaattaataacatgataagtaatcatataatacttcaaaaacacttaatatattttaaaaaaaatattttacat 6453257  T
Q  307 tgttcgtaattt-aaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    | |||||||||| |||||||||||||||| | |||||||||||   |||| |||||||||||||||| ||||    
T  6453256 tattcgtaatttaaaaaaataaaagtgagtcttcccctccctttttctcccaaaccctcaatccaaatacac 6453185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 376
Target Start/End: Original strand, 7394615 - 7394701
Alignment:
Q  290 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||| || |||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  7394615 aaaaaaacgttttgcattgttcgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 43732848 - 43732930
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | ||| |||||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  43732848 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 43732930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 31543249 - 31543315
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccc 31543315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 379
Target Start/End: Complemental strand, 29937676 - 29937513
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacattttacattgtt 310  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||   || |   || |||| ||| |||||| ||||||||    
T  29937676 gacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt---aatc---tattttagaaaaacatttgacattgtt 29937583  T
Q  311 cgt-aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    | | |||||||||||||||| ||| | |||| |   ||| || || |||||||||||| |||||||||||    
T  29937582 cataaatttaaaaaataaaaatgatctctcctccatctttccatcttaaaccctcaattcaaacacaccc 29937513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 1027023 - 1027091
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  1027023 cgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccc 1027091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 12022226 - 12022143
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcct-aaaccctcaatccaaacacaccc 379  Q
    ||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||| || |||||||| |||| |||||||||    
T  12022226 cattttataatgttcgtaatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacacaccc 12022143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 2248521 - 2248453
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||  ||| ||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  2248521 cgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccc 2248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 1281212 - 1281149
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||||||||||||| |||||| | ||||| | ||||||||||||||||||||||||||||||||    
T  1281212 cgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 9718651 - 9718722
Alignment:
Q  308 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||||||| |||||| | |  |||||||||||| |||||||||||||||||||||||||||||    
T  9718651 gttcataatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccc 9718722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 287 - 374
Target Start/End: Original strand, 36308994 - 36309081
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||||||| | |||| ||| ||| ||||||||||| |  |||||| | |||||||||||||||||||||||||||||| |||||||||    
T  36308994 tttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 8815224 - 8815142
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | ||| |||||||||||||| |||||| || | || |||| ||||||||||||||||||| ||||||||||||||    
T  8815224 cattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacaccc 8815142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 31543141 - 31543073
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  31543141 cgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatccaaacataccc 31543073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 30365306 - 30365373
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||  |||||||||||||||| |||| ||||| |||| ||||||||||||||    
T  30365306 gtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccc 30365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 7503131 - 7503197
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||  |||||| | |||||||||||| |||||||| ||| |||||||||||||||||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccc 7503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 40633051 - 40632997
Alignment:
Q  325 taaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| |||||||| ||||||||||||||||||||||| || |||||||||||    
T  40633051 taaaagtaagccctcctctcccttcccctcctaaaccctccattcaaacacaccc 40632997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 7979209 - 7979144
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||||||||| |||||| | | |||| ||||||||| || ||||||||||||||||||||||    
T  7979209 cgtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaacaca 7979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 30581988 - 30582033
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcct 356  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  30581988 cgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcct 30582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 11575582 - 11575646
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||  |||||| | ||||||||||||||| | ||||||||||| ||||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 13405041 - 13404977
Alignment:
Q  315 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| |||||| |   ||||| ||||||||||||||||||||||||||||| |||||||    
T  13405041 atttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaaccacaccc 13404977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 16024315 - 16024394
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||| | ||| |||||||||||||  |||||| | | ||||||||||||||||||||||| |||| ||||||||||||    
T  16024315 cattttataatgtccgtaatttaaaaag-aaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 34634318 - 34634386
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||| ||| ||||| | |||||||||||||||||| ||| ||||||||||||||    
T  34634318 cgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatccaaacacaccc 34634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 41103549 - 41103505
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  41103549 ccctcccctctcttcccctcctaaaccctccatccaaacacaccc 41103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 377
Target Start/End: Original strand, 24243118 - 24243287
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttaca 305  Q
    |||| |||||||||  ||||||||| ||||| ||| | |||||| ||||||||| |||||||||||  ||||||||     || ||||| | || | | |    
T  24243118 gacactataaaatgtcttttaaaaa-ttgaaataataacatgataaatgatcatataatacttcaatcacacttaattaatttgaaaaaaagatctcata 24243216  T
Q  306 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||  |||||||| ||||  ||||| ||||||||||||| |||||| | ||||||||| ||||||||||||    
T  24243217 ttgtctgtaatttagaaaaggaaagtaagccctcccctccattcccc-cttaaaccctcgatccaaacacac 24243287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 34196492 - 34196550
Alignment:
Q  320 aaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||| |||||||| |||||    
T  34196492 aaaaagaaaagtaagccctcccc-cccttcccctcctaaaccctccatccaaacgcaccc 34196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 4247725 - 4247763
Alignment:
Q  341 cctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacaccc 4247763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 11033482 - 11033420
Alignment:
Q  315 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| |||||| | |||  ||||||||||| || |||||||||||||||||||||||||    
T  11033482 atttaaaaaagaaaagtaaaccc--ccctcccttcctcttctaaaccctcaatccaaacacaccc 11033420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 28083781 - 28083744
Alignment:
Q  341 cctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  28083781 cctcccttcccctcctaaaccctcaatccgaacacacc 28083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 376
Target Start/End: Complemental strand, 30479806 - 30479721
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||| | | |||  ||||||||||||  |||||||| | ||||||||| | ||||||||||| |||| |||||||||||    
T  30479806 aaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactctcccctccatccccctcctaaatcctccatccaaacaca 30479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 379
Target Start/End: Original strand, 31738585 - 31738666
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||| |||||||||||||  |||  | | |||||||||  ||||||||||||||||||| ||||||||||||||    
T  31738585 attttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccc 31738666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 379
Target Start/End: Complemental strand, 3726900 - 3726864
Alignment:
Q  343 tcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||| ||||||||||||||    
T  3726900 tcccttcccctcctaaaccctccatccaaacacaccc 3726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 379
Target Start/End: Original strand, 2481977 - 2482016
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  2481977 ccctcccttcccctcctaaaccctccatccaaacataccc 2482016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 42650537 - 42650588
Alignment:
Q  342 ctcccttcccctcctaaaccctcaatccaaacacacccataaagtttactaa 393  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||| ||||    
T  42650537 ctcccttcctctcccaaaccctcaatctaaacacacccaaaaagttttctaa 42650588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 379
Target Start/End: Complemental strand, 6315101 - 6315067
Alignment:
Q  345 ccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||||||||||||||||||||||||    
T  6315101 ccttcgcctcctaaaccctcaatccaaacacaccc 6315067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 30479897 - 30479959
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||| |||| | | |||||| |||| |||| ||| |||||||||||||||||||||||    
T  30479897 tttaaaaaagaaaactaaaccctccgctccattcctctcataaaccctcaatccaaacacacc 30479959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 2413027 - 2412967
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||| || ||| ||||||||||     ||||||||||||||||| ||||||||||||    
T  2413027 gtaatttaaaaaagaatagtaagccctcccc-----tcccctcctaaaccctccatccaaacacac 2412967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 10028179 - 10028114
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||||||||| |||||| |   ||| |||||  ||||||||||||||||| |||||||||||    
T  10028179 cgtaatttaaaaaagaaaagtaaaatctcacctcctatcccctcctaaaccctcgatccaaacaca 10028114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 10028298 - 10028363
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||   |||||| | |||||||||| ||||| |||||||||||||  ||||||||||    
T  10028298 cgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaaccctctgtccaaacaca 10028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 379
Target Start/End: Complemental strand, 33922563 - 33922526
Alignment:
Q  342 ctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  33922563 ctcccttcccttcctaaaccctcaatccaaacataccc 33922526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 38198135 - 38198196
Alignment:
Q  227 ttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 288  Q
    |||| |||||||||| ||||| ||||||  |||||||| |||||||||||  ||||||||||    
T  38198135 tttttaaaaattgaaataacaacatgatatatgatcatataatacttcaatcacacttaatt 38198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 11785725 - 11785769
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| || ||| ||||||||||||||| ||||||||||||||    
T  11785725 ccctcccttctcttaccctcctaaaccctccatccaaacacaccc 11785769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 27487131 - 27487087
Alignment:
Q  244 aacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 288  Q
    |||| |||||| ||||||||| ||||||||||| |||||||||||    
T  27487131 aacaacatgataaatgatcatataatacttcaataacacttaatt 27487087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 40990359 - 40990426
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| ||||   | | ||| |||||||||| ||||||| ||||||||||||||||||||    
T  40990359 cgtaatttaaaaaagaaaaacaaactctctcctcccttcctctcctaa-ccctcaatccaaacacaccc 40990426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 176 - 379
Target Start/End: Complemental strand, 10204785 - 10204577
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||| ||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||| | | || ||||||||| ||||||||||    
T  10204785 ggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaattgaattaacaacgtaataaatgatcatataatacttca 10204686  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10204685 aaaacacttaatttattttaaaaagacattttacattgttggtaatttaaaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatcca 10204586  T
Q  371 aacacaccc 379  Q
    |||||||||    
T  10204585 aacacaccc 10204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 15986659 - 15986867
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||| ||||  || ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||    ||||||||| |||||||| |    
T  15986659 ggaggggaggacttaattttcttttttaatttacagacattataaaatgacttttaaaaaattgaattaacaacatttaaaatgatcatataatacttta 15986758  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  15986759 aaaacacttaatttattttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatcca 15986858  T
Q  371 aacacaccc 379  Q
    |||||||||    
T  15986859 aacacaccc 15986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 151 - 379
Target Start/End: Original strand, 40305670 - 40305908
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggagggga-----gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 245  Q
    |||||||||||||   |||||||||||||||||     |||||||  || ||||||||| ||| |||||||||||||| ||||||| |||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggagggcttagttttcttttttaaattacagacattataaaataatttttagaaaattgaattaa 40305769  T
Q  246 cagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 340  Q
    ||  ||||| ||||||||| || |||||||||||| |||||||||     |||| ||||||||||||| |||||||||||||||||||| ||||  ||||    
T  40305770 caatatgataaatgatcatatagtacttcaaaaacccttaatttattttgaaaaaacattttacattggtcgtaatttaaaaaataaaaatgagttctcc 40305869  T
Q  341 cctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  40305870 cctcccttctcctcctaaaccctcaatccaaacacaccc 40305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 151 - 378
Target Start/End: Original strand, 8551427 - 8551660
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggagggga-gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 249  Q
    |||||||||||||  ||||||||||  |||| | ||| |||||||  ||| ||||  || ||||||||||||||||||||||||||||| |||||||| |    
T  8551427 agggtgtgtttggatagagggtttaatagggaaagggtttacatttatttcttaaactacagacattataaaatgatttttaaaaaattaaattaacaac 8551526  T
Q  250 atgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctc 344  Q
    || || ||||||||| |||||||| ||||||||||||||||     |||| ||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  8551527 attataaatgatcatataatactttaaaaacacttaatttatttttaaaacacattttacattgctcgtaatttaaaaaataaaagtgagaccccccctc 8551626  T
Q  345 ccttcccctcctaaaccctcaatccaaacacacc 378  Q
     |||||||||||||||| ||||||||||||||||    
T  8551627 tcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 33744228 - 33744436
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||| || | |||||    
T  33744228 ggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatatatttcttca 33744327  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||| |||||||  |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  33744328 aaaacacttaatttattttaaaaaaacattttgaattgttcgtaatttaaaatataaaagtgagccctcccctcccttcatctcctaaaccctcaatcca 33744427  T
Q  371 aacacaccc 379  Q
    || ||||||    
T  33744428 aatacaccc 33744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 176 - 378
Target Start/End: Complemental strand, 34981019 - 34980812
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||| ||||| || ||||||||| |||  |||||||||||||||||| || |||||||| |||||| |||||| |||||| || ||||||||||    
T  34981019 ggaggggaggacttacttttcttttttaaattatggacattataaaatgatttatagaaaattgagttaacaacatgataaatgattatataatacttca 34980920  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||| | ||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||||    
T  34980919 aaaacacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatcca 34980820  T
Q  371 aacacacc 378  Q
    ||||||||    
T  34980819 aacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 176 - 379
Target Start/End: Complemental strand, 10043461 - 10043253
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||| || || || ||||||||| |||   | |||||||||||||||||| ||||||||||||||| ||| || ||| ||||| ||||||||||    
T  10043461 ggaggggaggactcacttttcttttttaaattacgaatattataaaatgatttttagaaaattgaattaacaacattataaataatcatataatacttca 10043362  T
Q  276 aaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    ||||||||||||||     ||||  | ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| |||||| |    
T  10043361 aaaacacttaatttcttttaaaacaatattttacattgttcgtaatttaaaaaataaaagtgagtcatcccctcccttcccctcataaaccatcaatcta 10043262  T
Q  371 aacacaccc 379  Q
    || ||||||    
T  10043261 aatacaccc 10043253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 197 - 379
Target Start/End: Complemental strand, 21581135 - 21580948
Alignment:
Q  197 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 291  Q
    |||||||| |||  ||| |||| |||| ||||||| ||||||||||||||| |||||| |||| |||| | |||||||||||||||||||||||     |    
T  21581135 ttttttaaattatggacgttatgaaataatttttagaaaattgaattaacaacatgataaatgttcatatgatacttcaaaaacacttaatttattttaa 21581036  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||| |||||| ||||||||| ||||||    
T  21581035 aaaaatattttacattgttcgtaatttagaaaataaaagtgacccctcccctccctttctctccaaaacccccaatccaaatacaccc 21580948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 226 - 345
Target Start/End: Complemental strand, 5688572 - 5688448
Alignment:
Q  226 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaa 320  Q
    |||||| ||||||||||||||| ||||||  ||||| || ||||||||||||||||||||||     ||||||| |||||||||||||||||||||||||    
T  5688572 tttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaa 5688473  T
Q  321 aaaataaaagtgagccctcccctcc 345  Q
    ||||||||||||| |||||||||||    
T  5688472 aaaataaaagtgaaccctcccctcc 5688448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 13634882 - 13634954
Alignment:
Q  307 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  13634882 tgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 14245177 - 14245089
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||| ||| ||| |||||||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  14245177 aaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 7544205 - 7544137
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7544205 cgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccc 7544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 13634776 - 13634712
Alignment:
Q  315 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 1657968 - 1658055
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||| |||||||| | ||| |||||||||||||  |||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  1657968 aaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 6382525 - 6382422
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 286  Q
    ||||| || ||||| |||||||  |||||||||||||  |||||| ||||||||||||||| |||||| |||| |||||| |||||||||||| ||||||    
T  6382525 cttacttttcttttctaatttacggacattataaaatactttttagaaaattgaattaacaacatgataaatgttcatgtgatacttcaaaaagacttaa 6382426  T
Q  287 ttta 290  Q
    ||||    
T  6382425 ttta 6382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 384
Target Start/End: Complemental strand, 11437108 - 11436935
Alignment:
Q  216 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacat------tttacattgt 309  Q
    ||||||||| ||||||||||||| || |||||||  ||| ||||||| | |||||||||||  ||  || ||||||||| | ||      | || |||||    
T  11437108 tataaaatgttttttaaaaaattaaaataacagcgcgataaatgatcgtataatacttcaatcac-gtttatttaaaaataaataaaatatatatattgt 11437010  T
Q  310 tcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
     ||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  11437009 ccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacacgcccttaaa 11436935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 26414962 - 26414894
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  26414962 cgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccc 26414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  317 ttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 14245206 - 14245289
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| ||| ||| |||||||||||||  ||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  14245206 acatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 379
Target Start/End: Original strand, 10476202 - 10476271
Alignment:
Q  310 tcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| || |||| | | |||||||||||||||||||||||||||| ||||||||||||||    
T  10476202 tcgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccc 10476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 14684638 - 14684727
Alignment:
Q  290 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||| ||||  ||||||| |||||| |||||| |||||||| ||| || ||||||||||||||| |||||||||||||||    
T  14684638 aaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacaccc 14684727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 379
Target Start/End: Original strand, 15858902 - 15858983
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||||||||||| |||||||| ||||| | |||||||||||| ||||| ||| ||||||| |||||||||||    
T  15858902 attttccattgttcgtaatttagaaaataaatgtgagtcatcccctcccttcacctcccaaagcctcaattcaaacacaccc 15858983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 16938524 - 16938480
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16938524 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 16938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 36363187 - 36363271
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||||||||| | | | |||||||||||||  |||||||| | ||| |||||||||||||||||||||||| ||||||||||    
T  36363187 aaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 6597845 - 6597984
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 291  Q
    ||||||||| |||  |||||| |||||||||||||  ||||||||| ||||| |||||| ||||||||| ||||||       ||||||||||||    |    
T  6597845 cttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatgataaatgatcatataatac-------acacttaatttatttta 6597937  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccct 338  Q
    ||| | |||||||||| ||| ||||||||||||||||| ||||||||    
T  6597938 aaaaatattttacattattcataatttaaaaaataaaaatgagccct 6597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 10043055 - 10043156
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 286  Q
    ||||| || |||| |||| ||| | |||||| | ||| |||| || ||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  10043055 cttacttttctttcttaaattataaacattaaagaattatttctagaaaattgaattaacaacatgataaatgatcatataatactttaaaaacacttaa 10043154  T
Q  287 tt 288  Q
    ||    
T  10043155 tt 10043156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 10043425 - 10043489
Alignment:
Q  309 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 373  Q
    |||||||||||||||| ||||||||| |||||||||||||  ||||||||||  |||||||||||    
T  10043425 ttcgtaatttaaaaaagaaaagtgagtcctcccctcccttttcctcctaaacaatcaatccaaac 10043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 10476090 - 10476022
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    ||||||||| |||||| | ||||| | ||||||||||||||||||||||||| ||||||||||| ||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacacccttaaa 10476022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 15986713 - 15986625
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| ||||||| | |||  |||| |||||||| |||| | || |||||||||||||||||||||||||||||  |||||||||||||    
T  15986713 aaaagtcattttataatgtctgtaaattaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacaccc 15986625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 5688590 - 5688633
Alignment:
Q  336 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  5688590 cctcccttcccttcccctcctaaaccctcaatccaaacacaccc 5688633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 10204752 - 10204819
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||| |||||| || ||||||||||||||||||||||||| |||  |||||||||||||    
T  10204752 gtaaattaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacaccc 10204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 379
Target Start/End: Original strand, 20147074 - 20147113
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacaccc 20147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 388
Target Start/End: Complemental strand, 12036018 - 12035928
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    |||||| | ||||| |||||||||||| ||||   || ||||| |||||||||||||||||||| || |||||||||||||| ||| ||||    
T  12036018 attttataatgttcataatttaaaaaagaaaaacaagtcctcctctcccttcccctcctaaaccatctatccaaacacacccttaaggttt 12035928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 12036007 - 12036084
Alignment:
Q  212 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 290  Q
    |||||||||||| ||| ||| |||||||||||| || |||||| ||| ||||| |||||||| ||||||||||||||||    
T  12036007 acattataaaattattattagaaaattgaatta-caacatgataaattatcatataatacttaaaaaacacttaattta 12036084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 33744260 - 33744194
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| |||||| | ||||||||||||||| || ||| ||||||| ||||||||||||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccc 33744194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 34980987 - 34981053
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| |||||| || ||||||||||||||||||| ||||||||| ||  ||||||||||    
T  34980987 taatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacaccc 34981053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 11756949 - 11756882
Alignment:
Q  308 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||||||||||||   | | ||||| ||||| ||||||||||||||||||||||||||||    
T  11756949 gttcgtaatttaaaaaataaaaacaaactctcccatccct-cccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 16501966 - 16502034
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccct-cccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||||||||||| |   || |||||| ||| |||||||||||||||||||||||||||||    
T  16501966 cgtaatttaaaaaataaaagtaatttctccccctctctttccctcctaaaccctcaatccaaacacacc 16502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 4373674 - 4373809
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| ||||||||| ||||| |||||  ||||||||||||     |||| || | ||| || || |||||||||||||| |||||| |  ||||| ||    
T  4373674 catgataaatgatcatataatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctccact 4373773  T
Q  344 cccttcccctcctaaaccctcaatccaaacacaccc 379  Q
       ||||| |||||||||||||||||||||||||||    
T  4373774 attttcccttcctaaaccctcaatccaaacacaccc 4373809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 7544335 - 7544378
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  7544335 ccctccccttccttcccctcctaaaccctccatccaaacacacc 7544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 379
Target Start/End: Complemental strand, 40305710 - 40305671
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccc 40305671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 40815365 - 40815298
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| |  |||| | ||||||||||||||||| | |||||||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacaccc 40815298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 42681509 - 42681450
Alignment:
Q  319 aaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||| |||||| |  |||||||||| |||||||| |||||||||||||||||||||||    
T  42681509 aaaaaaaaaaagtaaatcctcccctcctttcccctcttaaaccctcaatccaaacacacc 42681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 11757102 - 11757144
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  11757102 ccctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 377
Target Start/End: Original strand, 21581150 - 21581188
Alignment:
Q  339 cccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  21581150 cccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 22022891 - 22022849
Alignment:
Q  336 cctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  22022891 cctctcctccattcccctcctaaaccctcaatccaaacacacc 22022849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 8502904 - 8502831
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    |||||||||||||  |||||||| ||||||| ||| ||||| || |||||| || |||||||||||||| ||||    
T  8502904 cgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacacccttaaa 8502831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 11437094 - 11437185
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagcc---ctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||| | ||||| || ||||||||| |||||| || |   ||||| ||||||||||| |||||||||||||||||| ||||||    
T  11437094 aaaaaacattttatagtgttcctattttaaaaaagaaaagtaagtcgtcctcccttcccttccccttctaaaccctcaatccaaaaacaccc 11437185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 12036105 - 12036177
Alignment:
Q  303 acattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||||||||||||||| |||||||| | | ||||||||  |||| |||||||| ||||||| ||||||||    
T  12036105 acattgttcgtaatttaaaa-ataaaagtaaactctcccctcatttcctctcctaaatcctcaatacaaacaca 12036177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 16938678 - 16938727
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||| ||||    
T  16938678 ccctcccctccattcctctcctaaaccctccatccaaacacacccttaaa 16938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 6382393 - 6382357
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgag 334  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6382393 attttacattgttcgtgatttaaaaaataaaagtgag 6382357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 377
Target Start/End: Complemental strand, 14681505 - 14681473
Alignment:
Q  345 ccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||||||||||||||||||||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacac 14681473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 379
Target Start/End: Original strand, 28279533 - 28279720
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 291  Q
    ||||||| |||  |||||||| ||||| |||||||||| || |  ||  | |||||| ||||||||| |||||||||||  ||||||| ||||      |    
T  28279533 tttttaaattatggacattatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacacttagtttattttaga 28279632  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||| |||| ||| ||  | | |||||||||||  |||||| | ||||| |||||||||||||  || || ||||||||||||||||||    
T  28279633 aaaaacatgttatatattccataatttaaaaaggaaaagtaaaccctctcctcccttccccttatagactctcaatccaaacacaccc 28279720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 379
Target Start/End: Complemental strand, 9856922 - 9856891
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||||||    
T  9856922 tcccctcctaaaccctcaatccaaacacaccc 9856891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 36363075 - 36363024
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    ||||||||| ||||||| |||||||||||||||||||||  || ||||||||    
T  36363075 ctcccctccattccccttctaaaccctcaatccaaacacgtccttaaagttt 36363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 375
Target Start/End: Original strand, 36392359 - 36392388
Alignment:
Q  346 cttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||||||||||||||||||||||||||    
T  36392359 cttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 10650589 - 10650657
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |  || ||||||||||||||| ||||  |||||||||||||||||    
T  10650589 cgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttcaatccaaacacaccc 10650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 12600703 - 12600743
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||| |||||||||||||||| | |||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacac 12600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 20513612 - 20513680
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| |  ||| || ||  ||| | |||||||||||||||||||||||||||    
T  20513612 cgtaatttaaaaaagaaaagtaaatccttccttcttttcgcttcctaaaccctcaatccaaacacaccc 20513680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 176 - 375
Target Start/End: Complemental strand, 33519257 - 33519053
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||||| |||| || ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  33519257 ggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttca 33519158  T
Q  276 aaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    ||||||||||||||     ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  33519157 aaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatcca 33519058  T
Q  371 aacac 375  Q
    |||||    
T  33519057 aacac 33519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 37926015 - 37925833
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttaca 305  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||  ||||| || |||||||||||||||||||||     || ||||| ||||||||||    
T  37926015 gacattataaaatgatgtttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctatttaaaaaaaacattttaca 37925916  T
Q  306 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  37925915 ttgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttagagttt 37925833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 36267588 - 36267796
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||||||||  || ||||||||| |||  || |||||||||||||||||| |||||||||| ||||  ||||| ||||||||| ||||||||||    
T  36267588 ggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaaattgaatcaacaatatgataaatgatcatataatacttca 36267687  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||| | ||     |||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36267688 aaaacacttactatattttgaaaaaacattttacattggttgtaatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatcca 36267787  T
Q  371 aacacaccc 379  Q
    |||||||||    
T  36267788 aacacaccc 36267796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 167 - 379
Target Start/End: Complemental strand, 39646687 - 39646470
Alignment:
Q  167 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgt 266  Q
    ||||||||||||||||| | || || ||  |||||||| |||  ||||||||||||||||||||| ||||||||||||||| ||||||  ||||| || |    
T  39646687 gagggtttaggaggggatgactcacttttattttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgattgatgatgatat 39646588  T
Q  267 aatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 361  Q
    ||||||||||||||| ||||||||     |||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  39646587 aatacttcaaaaacagttaatttattttaaaaatatattttacattgttcataatttaaaaaataaaagtgattcctcccctcccttcctctcctaaacc 39646488  T
Q  362 ctcaatccaaacacaccc 379  Q
     |||||||||||||||||    
T  39646487 gtcaatccaaacacaccc 39646470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 196 - 379
Target Start/End: Original strand, 28074158 - 28074351
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||         
T  28074158 cttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacctgataaatgatcatataatacttcaaaaacacttaatttatttaa 28074257  T
Q  291 ---aaaagacattttacattgttcgtaatttaaa--aaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
       |||| |||||||||||||||||| ||| |||  |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  28074258 aacaaaaaacattttacattgttcgtgattaaaaataaataaaagtgatccctccccttccttcctctcctaaaccctcaatccaaacacaccc 28074351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 148 - 363
Target Start/End: Complemental strand, 48013740 - 48013520
Alignment:
Q  148 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 247  Q
    ||||||||||||||||   ||||| |||||||||||| |||||| || | ||||||| | | |||| ||||||||| ||||||| |||||||||||||||    
T  48013740 ttaagggtgtgtttggatggagggattaggaggggagagcttacttttcgtttttaaatcacagactttataaaataatttttagaaaattgaattaaca 48013641  T
Q  248 gcatgatcaatgatcatgt-aatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 341  Q
     |||||| ||||||||| | |||  |||||||||||||||     |||||||| ||||||||||||||||||||||| ||||||||||| || | |||||    
T  48013640 acatgataaatgatcatatgaatttttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattt-aaaaataaaagcgaacgctccc 48013542  T
Q  342 ctcccttcccctcctaaaccct 363  Q
    ||||||||||||||||||||||    
T  48013541 ctcccttcccctcctaaaccct 48013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 176 - 378
Target Start/End: Complemental strand, 37620983 - 37620776
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||||| || | || ||||||||| |||  ||||||||||||||||||||  |||||||||||| || |||||| || ||| || ||||||||||    
T  37620983 ggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatcaacatgataaaagattatataatacttca 37620884  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||| ||||||||     ||||  ||||||||||||||| |||||| ||||  |||||||| | ||||||||||||||||||| ||||||||||||||    
T  37620883 aaaacatttaatttattttaaaaaatcattttacattgttcataatttgaaaataaaaagtgaactctcccctcccttcccctcccaaaccctcaatcca 37620784  T
Q  371 aacacacc 378  Q
    ||||||||    
T  37620783 aacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 181 - 377
Target Start/End: Complemental strand, 35422168 - 35421967
Alignment:
Q  181 ggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaac 280  Q
    |||||| |||| || |||||| || |||  ||||||||||||| ||||||| ||||||||||||||| ||| || ||| ||||| | |||||||||||||    
T  35422168 ggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacataataaataatcatatgatacttcaaaaac 35422069  T
Q  281 acttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||     |||||||| ||||||||||||||| |||||||||||||||||| | || | ||  |||||||| |||| |||| |||||||||||||||    
T  35422068 acttaatttattttaaaaaaacattttacattgtttgtaatttaaaaaataaaaataagtcatcttctcccttcacctcttaaatcctcaatccaaacac 35421969  T
Q  376 ac 377  Q
    ||    
T  35421968 ac 35421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 171 - 377
Target Start/End: Complemental strand, 21857560 - 21857350
Alignment:
Q  171 gtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaata 270  Q
    |||||||||| |||| ||||| || || ||||||||   | |||||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||||    
T  21857560 gtttaggaggagaggacttacttttctcttttaattacga-acattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatacaata 21857462  T
Q  271 cttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 365  Q
     |||||||||||||||     ||||||||   |||||| ||||||| ||||||||||||||||| ||| | |||  |||||||||||| ||||||| ||     
T  21857461 tttcaaaaacacttaatttattttaaaaaaggattttatattgttcttaatttaaaaaataaaaatgaactctctactcccttccccttctaaaccttcg 21857362  T
Q  366 atccaaacacac 377  Q
    ||||||||||||    
T  21857361 atccaaacacac 21857350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 382
Target Start/End: Original strand, 12670928 - 12671082
Alignment:
Q  233 aaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataa 327  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |     |||| |||||| |||||||||||| ||||||||||||    
T  12670928 aaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattcatttacaaaaaacatttcacattgttcgtagtttaaaaaataa 12671027  T
Q  328 aagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccata 382  Q
    ||||||| | | |||||  || | |||||||| ||||||||||||||||||||||    
T  12671028 aagtgagtctttccctctgtttcactcctaaaacctcaatccaaacacacccata 12671082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 176 - 377
Target Start/End: Original strand, 31364080 - 31364285
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||| |||||| || ||||| ||| |||  ||||||||||||||||||| | |||||||||| |||  ||| |   |||||||| ||||||||||    
T  31364080 ggaggggagagcttacttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaacgacataa---atgatcatataatacttca 31364176  T
Q  276 aaaacac---ttaatttaaaaagacattttacattgttcgtaatttaaaaaata------aaagtgagccctcccctcccttcccctcctaaaccctcaa 366  Q
    |||||||   ||| |||||||| |||||||||||||||| ||||||||||||||      ||||| | ||||  ||||||||||||||||||||||||||    
T  31364177 aaaacacaacttattttaaaaaaacattttacattgttcctaatttaaaaaataaaaaataaagtaaaccct--cctcccttcccctcctaaaccctcaa 31364274  T
Q  367 tccaaacacac 377  Q
    |||||||||||    
T  31364275 tccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 48881593 - 48881792
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||| ||||||| || ||||||||| |||  ||||||||||||| ||||| | ||||||||||||||| |||||| |||||| || |||| |||||    
T  48881593 ggaggggatggcttacttttcttttttaaattacggacattataaaataattttcagaaaattgaattaacaacatgataaatgattatataatgcttca 48881692  T
Q  276 aaaacacttaa------tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 369  Q
    |||| ||||||      |||||||| ||||||||| ||||| |||||||||||| |||||||||           |||||||||||||||||||||||||    
T  48881693 aaaatacttaatttatttttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtga----------accttcccctcctaaaccctcaatcc 48881782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 8122328 - 8122145
Alignment:
Q  205 tttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaat----acttcaaaaacacttaattta-----aaaag 295  Q
    |||| |||||||||||||| ||||||| |||||||||||||||  ||||| ||| ||||| ||||    |||||||||||| ||||||||     |||      
T  8122328 tttatagacattataaaataatttttagaaaattgaattaacaagatgataaattatcatataattaatacttcaaaaacaattaatttattttaaaaca 8122229  T
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    | |||||| || ||||||||||||||||||||||||||| | |||||||||||| |||||||||  |||||| |||||||||||    
T  8122228 atattttatatggttcgtaatttaaaaaataaaagtgagtcttcccctcccttctcctcctaaattctcaattcaaacacaccc 8122145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 266 - 382
Target Start/End: Original strand, 12682854 - 12682975
Alignment:
Q  266 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaac 360  Q
    |||||||||||||||||||||||||     |||| ||||||||||||||||||| ||||||||||||||||||||| | |||||  || | ||||||||     
T  12682854 taatacttcaaaaacacttaatttatttaaaaaatacattttacattgttcgtagtttaaaaaataaaagtgagcctttccctctgtttcgctcctaaaa 12682953  T
Q  361 cctcaatccaaacacacccata 382  Q
    ||||||||||||||||||||||    
T  12682954 cctcaatccaaacacacccata 12682975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 378
Target Start/End: Complemental strand, 16833867 - 16833684
Alignment:
Q  213 cattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt----------------aaaaaga 296  Q
    |||||||| || ||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||                ||||| |    
T  16833867 cattataatataatttttataaaattgaattaataacatgataaatgatcatgtaatacttcaaaaacacttaatttttttttaaaaaaaaaaaaaaaaa 16833768  T
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgag-ccct-cccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||||||||||||||||||||||||| || | || | | |||||| ||||| |||||||||||||||||||||||    
T  16833767 cattttacattgttcgtaatttaaaaaataaaagtaagtctctactcatccctttccctcttaaaccctcaatccaaacacacc 16833684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 39856040 - 39856117
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39856040 cgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttaaagttt 39856117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 198 - 361
Target Start/End: Complemental strand, 48015394 - 48015229
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aa 291  Q
    ||||||| ||| |||| ||||||||| ||||||  ||||||||||||||| |||||| ||||||||| ||||  ||||||||||||||||||      ||    
T  48015394 tttttaaattacagactttataaaataatttttggaaaattgaattaacaacatgataaatgatcatataatttttcaaaaacacttaatttatttaaaa 48015295  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 361  Q
    ||| ||||||||||||    ||||||||||| ||||||| || | ||||||||||||||| || ||||||    
T  48015294 aaaaacattttacatt----gtaatttaaaagataaaagcgaacgctcccctcccttcccttcgtaaacc 48015229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 23116269 - 23116408
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaa-tgatttttaaaaaattgaattaacagc 249  Q
    |||||||||||||   |||||||||||| |||||||||||| || ||||||||| ||| ||||| ||||||| || || ||||||||||||| || || |    
T  23116269 agggtgtgtttggatggagggtttaggaagggagggcttacttttcttttttaaattacagacactataaaagtgtttattaaaaaattgaaatagcaac 23116368  T
Q  250 atgatcaatgatcatgtaatacttcaaaaacacttaattt 289  Q
    ||||| |||||| || |||||||||||  |||||||||||    
T  23116369 atgataaatgattatataatacttcaatcacacttaattt 23116408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 3215934 - 3216048
Alignment:
Q  215 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgt 309  Q
    ||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||| ||| |||| |||||     |||| ||||||||||||||    
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatgataaatgatcatataatacttcataaatacttgatttattttgaaaaaacattttacattgt 3216033  T
Q  310 tcgtaatttaaaaaa 324  Q
    || ||||||||||||    
T  3216034 tcataatttaaaaaa 3216048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 28074186 - 28074104
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | ||| |||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  28074186 cattttataatgtccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccc 28074104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 48881640 - 48881559
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  48881640 attttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccc 48881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 36267622 - 36267554
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36267622 cgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccc 36267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 334
Target Start/End: Complemental strand, 3143673 - 3143526
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa----cagcatgatcaatgatcatgtaatacttcaaaaacacttaa----- 286  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||    ||  ||||| ||||||||| |||||||||||||| ||||||         
T  3143673 cttttttaaattaatgacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaatttat 3143574  T
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgag 334  Q
    |||| ||| | |||||||||||||  |||||||||||| |||| ||||    
T  3143573 tttataaaaatattttacattgtttataatttaaaaaaaaaaattgag 3143526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 31571645 - 31571713
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| | | |||||||| ||||||||||||||||||||||||||||||||||    
T  31571645 cgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 47390948 - 47390856
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||| |||| ||| || |||| |||||||||||| |||||| | |||||| ||||||||||||||||| ||||||||||||||||||||    
T  47390948 tttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccc 47390856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 1051670 - 1051741
Alignment:
Q  308 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||| |||| | |  |||| |||||||||||||||||||||||||||||||||||||||    
T  1051670 gttcgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccc 1051741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 33519224 - 33519291
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| || |||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  33519224 gtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccc 33519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 18795746 - 18795835
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||| |||||||| |||||||||||||||||||| ||||   |||| |||||| ||||||||| |||||| ||||||||||||||||    
T  18795746 tttaaaaaaacattttatattgttcgtaatttaaaaaagaaaatcaagccttcccct-ccttccccttctaaactctcaatccaaacacac 18795835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 249 - 377
Target Start/End: Original strand, 33655216 - 33655349
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |  | |||||||||||| |||||| | ||||| |||    
T  33655216 catgataaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaaccctcgcct 33655315  T
Q  344 cccttcccctcctaaaccctcaatccaaacacac 377  Q
    | ||||||||||||||||||||||||||||||||    
T  33655316 ctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 13771097 - 13771189
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| |||| ||| || || |||||||||||||  |||||| | | ||| |||||||||||||||||||||||||||| ||||||||||    
T  13771097 tttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccc 13771189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 30592292 - 30592388
Alignment:
Q  180 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 276  Q
    |||||||||||| || ||||||||| ||| ||||| |||||||||||||||||||||||||| |||    ||||| ||| ||||| |||||||||||    
T  30592292 gggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaataatcatatgataaataatcatataatacttcaa 30592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 4833599 - 4833532
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||  |||||| | |||||||||||||||||||||||||||||| ||||||||| ||||    
T  4833599 gtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacataccc 4833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 41497032 - 41496958
Alignment:
Q  305 attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||||||||  |||||| |  | ||||||||||||||||||||||||||| ||||||||||||||    
T  41497032 attgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacaccc 41496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 13771030 - 13770949
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||| |||||||||||||  | |||| |  |||||||||||||||||||||||| |||||||||||||||||||    
T  13771030 attttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccc 13770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 4835548 - 4835480
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| ||| | |||||||||| | ||||||||||||||||| ||||||||||    
T  4835548 cgtaatttaaaaaagaaaagtaagcacacccctccctttctctcctaaaccctcaatctaaacacaccc 4835480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 18231757 - 18231829
Alignment:
Q  307 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||||||||||||  |||||| |  ||||||||||||||||||||||||| ||| ||||||||||||||    
T  18231757 tgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctccatccaaacacaccc 18231829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 379
Target Start/End: Complemental strand, 25887236 - 25887193
Alignment:
Q  336 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacaccc 25887193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 30592321 - 30592254
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| ||||||||| |||||| |||||||||| |||| ||||||| ||||||    
T  30592321 gtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaatcctccatccaaatacaccc 30592254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 379
Target Start/End: Complemental strand, 40196616 - 40196533
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| | ||| ||||||| |||||  |||||| | |||||| |||||||||||||| |||||||| ||||||||||||||    
T  40196616 acattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccc 40196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 48147404 - 48147471
Alignment:
Q  300 tttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaat 367  Q
    |||||||| || |||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||    
T  48147404 tttacattatttgtaatttaaaaaataaaagtgagctctctcctctctttccctcctaaactctcaat 48147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 2087785 - 2087892
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaa----tgatcatgtaatacttcaaaaacac 282  Q
    ||||| || ||||||||| |||  || |||||||||| |||||||||||| |||||||||| |||||| ||    ||||||| ||||||||||||||||     
T  2087785 cttacttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataattgatcatataatacttcaaaaacat 2087884  T
Q  283 ttaattta 290  Q
    | ||||||    
T  2087885 taaattta 2087892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 37926002 - 37926083
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||| | ||| ||||||||| |||| |||| |||| |||||||||||||||| ||||||| | ||||||| ||||||||    
T  37926002 cattttataatgtccgtaatttagaaaagaaaaatgagtcctcccctcccttcccttcctaaatcttcaatcctaacacacc 37926083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 379
Target Start/End: Complemental strand, 40282263 - 40282198
Alignment:
Q  314 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| ||||   | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccc 40282198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 42306505 - 42306571
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||  |||| | | || |||||||  |||||||||||||||||||||||||||||||    
T  42306505 cgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 43230305 - 43230239
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||| |||||| | ||||||||| |||| | ||| ||||||| ||||||||||||||    
T  43230305 cgtaatttaaaaaagaaaagtaaaccctccccttcctttctctcttaaacccccaatccaaacacac 43230239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 379
Target Start/End: Original strand, 47391057 - 47391099
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  47391057 ctcccctcccttcccctcttaaaccctccatccaaacacaccc 47391099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 17853106 - 17852966
Alignment:
Q  149 taagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacag 248  Q
    |||||||||||||||   ||||||||||||||||||||||||| || | ||||||| |||    || ||| ||| | ||||||||||  | || |||||     
T  17853106 taagggtgtgtttggatggagggtttaggaggggagggcttacttttcatttttaaattacgagcactatgaaaag-tttttaaaaagataaaataacaa 17853008  T
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattta 290  Q
    |||||| || |||||| |||||| ||||  ||||||||||||    
T  17853007 catgataaacgatcatataatacctcaatcacacttaattta 17852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 48015383 - 48015456
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaag 385  Q
    ||||||||||||  |||||| ||| |||  ||||||||||||||||| ||||| ||||||||| |||| |||||    
T  48015383 gtaatttaaaaacgaaaagtaagctctcatctcccttcccctcctaatccctccatccaaacaaacccttaaag 48015456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 23116418 - 23116470
Alignment:
Q  326 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||| || ||||||||||||||||||| |||||||||  ||||||||||||    
T  23116418 aaaagtaagtcctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 34228494 - 34228562
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||||  |||||| |  |||||||||||||| ||||||||||| ||||| |||||||||||    
T  34228494 cgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaaaccttcaattcaaacacaccc 34228562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 13425188 - 13425121
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||  |||| | | || ||| || |||||||||||||||||||| ||||||||||||||    
T  13425188 gtaatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccctctatccaaacacaccc 13425121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 31553243 - 31553186
Alignment:
Q  320 aaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  31553243 aaaattaaaagtga-ccctctcctcccttcccctcctaaa-cctccatccaaacacaccc 31553186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 379
Target Start/End: Original strand, 37417835 - 37417866
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacaccc 37417866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 351
Target Start/End: Original strand, 41497065 - 41497172
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| ||||||||| |||| ||||||  ||||||||||||      ||| |||| ||| || || |||||||||||||| |||||| | |||||||||    
T  41497065 catgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccct 41497164  T
Q  344 cccttccc 351  Q
    ||||||||    
T  41497165 cccttccc 41497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 25887366 - 25887420
Alignment:
Q  309 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccct 363  Q
    |||||||||||||||  ||| || | | |||||||||||||||||||||||||||    
T  25887366 ttcgtaatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaaccct 25887420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 26365836 - 26365770
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccc-tcctaaaccctcaatccaaacacac 377  Q
    ||||| ||||||| |||||| | | |||  ||||||||||| |||||||||||||||||||||||||    
T  26365836 gtaatataaaaaagaaaagtaaactctcaactcccttccccctcctaaaccctcaatccaaacacac 26365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 31364128 - 31364070
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcc 355  Q
    ||||||| | ||| ||||||||| |||| |||||| ||| |||||||||||||||||||    
T  31364128 cattttataatgtccgtaatttagaaaagaaaagtaagctctcccctcccttcccctcc 31364070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 47230019 - 47230061
Alignment:
Q  336 cctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||  ||||||||||||||||| ||||||||||    
T  47230019 cctcccctcccttttcctcctaaaccctcaattcaaacacacc 47230061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 37620951 - 37621012
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||||||||||| |||||  | ||||||||||||||||| ||  |||||||| |||||||||    
T  37620951 taatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccctccatccaaaca 37621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 41008225 - 41008188
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  41008225 ctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 17852913 - 17852873
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  17852913 tcccctcctaaaccctcaatctaaacacaccctaaaagttt 17852873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 378
Target Start/End: Original strand, 24970379 - 24970407
Alignment:
Q  350 ccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||||||||||||||||||    
T  24970379 ccctcctaaaccctcaatccaaacacacc 24970407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 35422126 - 35422198
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||| | ||| |||||||| ||||| |||||| | |||||| |||  || |||||||||||||||||||||    
T  35422126 attttataatgtccgtaattttaaaaagaaaagtaaaccctccactctatttccctcctaaaccctcaatcca 35422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 39646630 - 39646678
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    ||||||| | ||| |||||||||||||||||||||||| | ||||||||    
T  39646630 cattttataatgtccgtaatttaaaaaataaaagtgagtcatcccctcc 39646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 376
Target Start/End: Original strand, 39646671 - 39646699
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||||||||||||||||||||||||    
T  39646671 tcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 148 - 345
Target Start/End: Complemental strand, 8390 - 8182
Alignment:
Q  148 ttaagggtgtgttt-gggaagagggtttaggaggggaggg-----cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaa 241  Q
    |||||||||||||| |||||||| ||||||||||||||||     ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  8390 ttaagggtgtgtttagggaagagagtttaggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaa 8291  T
Q  242 ttaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagcc 336  Q
    |||||| |||||| ||||||||| |||||||||||||||| |||||     |||||||||||||| |||||||||||||||||||||||||||||||||     
T  8290 ttaacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgttcgtaatttaaaaaataaaagtgagct 8191  T
Q  337 ctcccctcc 345  Q
    |||| ||||    
T  8190 ctcctctcc 8182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 5e-60; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 176 - 379
Target Start/End: Original strand, 1085524 - 1085733
Alignment:
Q  176 ggaggggagggcttacatt-ccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 274  Q
    |||||||||| ||||| || |||||||||| |||  ||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  1085524 ggaggggaggacttacttttccttttttaaattacggacattagaaaatgatttttagaaaattgaactaacagcatgataaatgatcatataatacttc 1085623  T
Q  275 aaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 369  Q
    ||||||||||||||||     |||| ||||||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||||||||| ||||    
T  1085624 aaaaacacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaaataaaagtgagtcatctcctcccttcccctcctaaaccctctatcc 1085723  T
Q  370 aaacacaccc 379  Q
    ||||||||||    
T  1085724 aaacacaccc 1085733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 153 - 379
Target Start/End: Complemental strand, 33643499 - 33643269
Alignment:
Q  153 ggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatg 252  Q
    |||||||||||  |||||||||||||||||||   ||| ||| ||||||||| |||   ||||| |||||||||||||| ||||||||||||| |  |||    
T  33643499 ggtgtgtttggatagagggtttaggaggggagaattta-atttcttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatg 33643401  T
Q  253 atcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctccct 347  Q
    || ||||||||| |||||||||||||||||||||||||     |||| |||||||||||| |||||||||||||||||||||||||| | |||| |||||    
T  33643400 atgaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatttttcgtaatttaaaaaataaaagtgagtcatcccttccct 33643301  T
Q  348 tcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| ||||||||||    
T  33643300 tcccctcctaaaccttcaatctaaacacaccc 33643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 379
Target Start/End: Complemental strand, 35928001 - 35927815
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 291  Q
    ||||||||| ||| |||  ||||||||| ||||| | ||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||    |    
T  35928001 cttttttaaattacagattttataaaataatttt-agaaaattgaattaacaacatgataaatgatcatataatacttcaaaaatacttaatttatttta 35927903  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
     || |   |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35927902 gaaaaatatttacattgttcataatttaaaaaataaatgtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccc 35927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 176 - 377
Target Start/End: Original strand, 40709327 - 40709532
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||| ||||| ||||| || ||||||||| |||   | |||||||||| ||||||| |||||| |||||||   ||||| ||||||||| ||||||||||    
T  40709327 ggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaaattaacgatatgataaatgatcatataatacttca 40709426  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    ||||||||||||||      |||| || ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  40709427 aaaacacttaatttctttttaaaaaaccttttacattgttcataatttaaaaaataaaagtga-ccctcccctccgttcccctcctaaatcctcaatcca 40709525  T
Q  371 aacacac 377  Q
    |||||||    
T  40709526 aacacac 40709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 148 - 352
Target Start/End: Complemental strand, 47071288 - 47071079
Alignment:
Q  148 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 247  Q
    ||||||||||||||||    ||||||||||| |||| | || || || ||||||||| |||  ||||||||||||||||||||| |||||| ||||||||    
T  47071288 ttaagggtgtgtttggatgaagggtttaggaagggaagactaacttttcttttttaaattacggacattataaaatgatttttagaaaatttaattaaca 47071189  T
Q  248 gcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 342  Q
     |||||| |||||||||  |||| |||||||||||||||     ||| |||| ||||||||||||| |||||||||| ||||||||| ||| |  | |||    
T  47071188 acatgataaatgatcataaaatatttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaaatgaacaatgccc 47071089  T
Q  343 tcccttcccc 352  Q
    ||||||||||    
T  47071088 tcccttcccc 47071079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 177 - 331
Target Start/End: Complemental strand, 25268472 - 25268313
Alignment:
Q  177 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 276  Q
    |||||||||| |||| |||||||||||| |||  || |||||||||||||||||| |||||| ||| |||| | |||| ||||||||| |||||||||||    
T  25268472 gaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaacgtgataaatgatcatataatacttcaa 25268373  T
Q  277 aaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagt 331  Q
    ||||||||||     |||||||| ||||||||||||||||  ||||||||| ||||||||    
T  25268372 aaacacttaatttattttaaaaatacattttacattgttcaaaatttaaaatataaaagt 25268313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 172 - 379
Target Start/End: Original strand, 525133 - 525343
Alignment:
Q  172 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 271  Q
    ||||||||||||||  |||| || ||||||||| |||  ||||| ||||||| ||||||| ||| |||||||||||  ||||| |||||| || ||||||    
T  525133 tttaggaggggagga-ttacttttcttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaatatgataaatgattatataatac 525229  T
Q  272 ttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 365  Q
    |||||| | ||||||||||      |||| ||||||||| ||||| |||||||||||| ||||||||| | || || ||||||||| |||||||||||||    
T  525230 ttcaaacaaacttaatttattttaaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactcttccttcccttcccgtcctaaaccctca 525329  T
Q  366 atccaaacacaccc 379  Q
    ||||||||||||||    
T  525330 atccaaacacaccc 525343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 51303467 - 51303385
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51303467 cattttacattgttggtaatataaaaaataaaagtgagccctcccctcccctcccctcctaaaccctcaatccaaacacaccc 51303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 196 - 343
Target Start/End: Complemental strand, 2506728 - 2506576
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| ||| ||| |||||||||| ||||||||||||| |||||||||  || || ||||||||| |||||||||||||||||||||||||         
T  2506728 cttttttaaattacagatattataaaataatttttaaaaaatcgaattaacaatataataaatgatcatataatacttcaaaaacacttaatttattttg 2506629  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||| |||||||| |||| ||||||||||||| |||||| ||| |||||||||    
T  2506628 aaaaaacattttatattggtcgtaatttaaaagataaaaatgaaccctcccct 2506576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 218 - 350
Target Start/End: Original strand, 51303461 - 51303600
Alignment:
Q  218 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aaaaagacattttacattgttc 311  Q
    |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||      ||||| |  |||||||||||||    
T  51303461 taaaatgatttttttaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaaatgttttacattgttc 51303560  T
Q  312 gtaatttaaaaaat-aaaagtgagccctcccctcccttcc 350  Q
    |||||||||||||| |||| ||||||||||| ||||||||    
T  51303561 gtaatttaaaaaataaaaaatgagccctcccttcccttcc 51303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 372
Target Start/End: Original strand, 13386989 - 13387163
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-------------aaaagac 297  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||| ||||||||| ||||||   ||||||||||||||||             |||| ||    
T  13386989 gacatcataaaacgatttttagaaaattgaattaacaacatgataaatgatcatataatacacaaaaaacacttaatttatttataaaaaaaaaaaaaac 13387088  T
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||||| ||||||| |||||||||||||||||| |||| ||||| ||| ||| |||||||||||||||||||||||    
T  13387089 atttttcattgtttgtaatttaaaaaataaaaatgagtcctccactctctttccctcctaaaccctcaatccaaa 13387163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 150 - 337
Target Start/End: Complemental strand, 1344783 - 1344592
Alignment:
Q  150 aagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 249  Q
    |||| |||||||||   |||||||||||||||||    |||  || ||||||||| |||  |||||| |||||||||||||| |||||||||  |||| |    
T  1344783 aaggatgtgtttggatggagggtttaggaggggaaaatttatttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaac 1344684  T
Q  250 atgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccc 337  Q
    ||||| ||| | ||| || ||| |||||||||||||||||     |||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  1344683 atgataaataaacatatattacatcaaaaacacttaattttttttaaaaaacattttgcattgtttgtaatttaaaaaataaaagtgagccc 1344592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 23536839 - 23536924
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    |||||||| ||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  23536839 tttaaaaaaacattttacattgatcattatttaaaaaataaaaatgagccctcccctcccttcccctcataaatcctcaatccaaa 23536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 35513006 - 35512909
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatactt 273  Q
    |||||||||||||||| ||  |||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  35513006 ggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 379
Target Start/End: Complemental strand, 17622694 - 17622537
Alignment:
Q  228 tttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacatttta------cattgttcgtaatttaaa 321  Q
    |||||||||||||||||| | |||||| | ||||||| ||||||||| |||||||||||||||  |     |||||      ||||||||||| ||||||    
T  17622694 tttaaaaaattgaattaataacatgataagtgatcatataatacttctaaaacacttaatttattatttttttttaaaattacattgttcgtagtttaaa 17622595  T
Q  322 aaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| |  ||||||||||| |||||| |||||||||||||||    
T  17622594 aaataaaagtgagtcctcccattgcttcccctcctgaacccttaatccaaacacaccc 17622537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 12234079 - 12234006
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  12234079 cgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacacccttaaa 12234006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 379
Target Start/End: Complemental strand, 20607390 - 20607224
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta---------aaaagacattt 301  Q
    ||||||||||||||||||||  |||||| ||||||||   ||||  || ||||| |||||||||||||||||||||||||         |||| ||||||    
T  20607390 gacattataaaatgattttttgaaaattaaattaaca---tgatatattatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaacattt 20607294  T
Q  302 tacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
     |||||||   |||||||||||||||||||||||||||||     ||||||||||||||||||||| |||||||||||    
T  20607293 -acattgta--taatttaaaaaataaaagtgagccctccc-----ttcccctcctaaaccctcaattcaaacacaccc 20607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 38509983 - 38509895
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| | | ||| |||||||||||||  |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  38509983 aaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccc 38509895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 2859107 - 2859169
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 373  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  2859107 cgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 30010458 - 30010333
Alignment:
Q  259 gatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccct 353  Q
    |||||| |||||||||||  ||||||||||||      ||| |||| ||| || || ||||||||||| || |||||| |  ||||||||||||||||||    
T  30010458 gatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccct 30010359  T
Q  354 cctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||    
T  30010358 cctaaaccctcaatccaaacacaccc 30010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 345
Target Start/End: Original strand, 40287325 - 40287467
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt--------aaaaagacatttt 302  Q
    |||||| | |||||| ||||| |||||||||||||||  || || |||||| || ||||||||||||||||||||||||        ||| | | |||||    
T  40287325 gacattgtgaaatgagttttagaaaattgaattaacaaaatcataaatgattatataatacttcaaaaacacttaatttatttaaaaaaatatatatttt 40287424  T
Q  303 acattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    |||| ||||||| |||||||||||||||||||| |||||||||    
T  40287425 acatagttcgtagtttaaaaaataaaagtgagctctcccctcc 40287467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 20607416 - 20607471
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagtttac 390  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20607416 ccctcccctcccttcccctcctaaaccctccatccaaacacacccttaaagtttac 20607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 41498476 - 41498405
Alignment:
Q  308 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||||||  |||||| | |||||||||| ||||||||||||||||||||||||||||||||||    
T  41498476 gttcataatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccc 41498405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 26324059 - 26324015
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 26324015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 35349637 - 35349705
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |||||||||||||||||||| |||||||| |||||||||||||||    
T  35349637 cgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccc 35349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 40095002 - 40094934
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | ||||||||| |||||||||||||||||||| ||||||||||||||    
T  40095002 cgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccc 40094934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 50079476 - 50079620
Alignment:
Q  233 aaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataa 327  Q
    |||||| || |||||  ||||| ||||||||| |||||||| ||||||||||||||||     |||| |||||||| |||||||||| |||||| |||||    
T  50079476 aaaatttaactaacaatatgataaatgatcatataatactttaaaaacacttaatttattttaaaaaaacattttatattgttcgtactttaaataataa 50079575  T
Q  328 aagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||  || | ||| ||||  ||| |||||||||| |||||||||||    
T  50079576 aaaggaactctctcctcttttctcctcctaaacactcaatccaaa 50079620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 12234185 - 12234252
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||  |||| | | |||||||||||||||||||||||||||||| |||||||||||||    
T  12234185 cgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 38510069 - 38510135
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||| ||||||||| |||| | | ||||||||||||||||||||||||||||| |||||||||||||    
T  38510069 cgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 379
Target Start/End: Complemental strand, 40709363 - 40709293
Alignment:
Q  309 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||| |||||| | |||||||||||||||    
T  40709363 ttcgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccc 40709293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 52707803 - 52707691
Alignment:
Q  226 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaa 320  Q
    ||||| ||||||| ||| |||| |||||| |||||| || |||||||||||||| || |||||||     |||| ||||||||||||||| ||| |||||    
T  52707803 ttttttaaaaatttaat-aacaacatgataaatgatgatataatacttcaaaaatacataatttatttttaaaaaacattttacattgtttgtagtttaa 52707705  T
Q  321 aaaataaaagtgag 334  Q
    ||||||||||||||    
T  52707704 aaaataaaagtgag 52707691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 30010507 - 30010575
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||||  |||||| | ||||||||||||||||||| |||||||||| ||||||||||||||    
T  30010507 cgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccc 30010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 32951493 - 32951561
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | | |||||||||||||| ||||||||| ||||||||||||||||||    
T  32951493 cgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccc 32951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 2859000 - 2858933
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| |||  |||||| | |||||||||||||| ||||||||||||||| ||||||||||||||    
T  2859000 gtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacaccc 2858933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 1085559 - 1085481
Alignment:
Q  311 cgtaatttaaaaaat-aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    ||||||||||||||  |||||| || |||||||||| | |||||||||||||||| |||||||||||||| || |||||    
T  1085559 cgtaatttaaaaaaggaaaagtaagtcctcccctccatccccctcctaaaccctccatccaaacacacccttagagttt 1085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 7444547 - 7444481
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||| |||||| | ||||||| ||||||| ||||| ||||||||||||| |||||||    
T  7444547 cgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 376
Target Start/End: Complemental strand, 51597793 - 51597672
Alignment:
Q  260 atcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctc 354  Q
    ||||| |||||||||||  ||||||||     |||||||| |||| ||| || || ||| |||||||||| |||||| | | ||||||||||||||  ||    
T  51597793 atcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaactctcccctcccttcctttc 51597694  T
Q  355 ctaaaccctcaatccaaacaca 376  Q
     |||||||||||||||||||||    
T  51597693 ataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 20576176 - 20576136
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 35512694 - 35512638
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||||||||||||||||||||||     ||||||||||||||||| |||||||||||    
T  35512694 tttaaaaaataaaagtgagccctccccc----tcccctcctaaaccctccatccaaacaca 35512638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 379
Target Start/End: Original strand, 26941042 - 26941076
Alignment:
Q  345 ccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccc 26941076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 2470820 - 2470731
Alignment:
Q  290 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||| | |||||||||||||||||   |||   | ||||||  || ||||||||||||||||||| ||||||||||||||    
T  2470820 aaaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaacacaccc 2470731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 10391941 - 10391880
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    |||||||||||||  |||||| | ||||||||||  ||||||||||||| ||||||||||||    
T  10391941 cgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaaacctcaatccaaa 10391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 25268439 - 25268500
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||||||||||||||  ||||| | |||||||||| |||||||| |||||||||| |||||||    
T  25268439 cgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaa 25268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 40095041 - 40095177
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 342  Q
    |||||| || |||||| |||||||||||  ||||||||||||      |||| |||| ||| || ||  ||||||||||||  |||||| | |||| ||     
T  40095041 catgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaaacccttcct 40095140  T
Q  343 tcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||  ||| |||||||||||||||||||||||||    
T  40095141 tcccttttccttctaaaccctcaatccaaacacaccc 40095177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 41498579 - 41498648
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctccctt-cccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| |  ||||||||||||| |||||||||||| ||| ||||||||||||||    
T  41498579 cgtaatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactctccatccaaacacaccc 41498648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 49832615 - 49832555
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||||||||||||| |||||| ||| |||| ||| |||||||||||||||| | ||||||||    
T  49832615 gtaatttaaaaaagaaaagtaagctctcctctcacttcccctcctaaaccttgaatccaaa 49832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 35927988 - 35928055
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| |  | ||||  |||||||||| |||| ||||||||||||||||||||    
T  35927988 gtaatttaaaaaagaaaagtaaatcatccctccccttccccttctaagccctcaatccaaacacaccc 35928055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 35349533 - 35349467
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |||||||| ||  ||||||| ||||||||| ||||||||||||||    
T  35349533 cgtaatttaaaaatgaaaagtaaaccctccccccc--tcccctcttaaaccctccatccaaacacaccc 35349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 377
Target Start/End: Original strand, 2470934 - 2470966
Alignment:
Q  345 ccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||||||| |||||||||||||||    
T  2470934 ccttcccctcctaaaccatcaatccaaacacac 2470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 44210994 - 44211054
Alignment:
Q  230 taaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 290  Q
    ||||||||| || ||||| |||||| || |||||| |||||||||||  ||||||||||||    
T  44210994 taaaaaattaaaataacaacatgataaacgatcatataatacttcaatcacacttaattta 44211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 49946768 - 49946828
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||| || |||||| | ||||| | |||||||||| ||||| |||||||||||||||||    
T  49946768 tttaaacaagaaaagtaaaccctcacatcccttccccgcctaatccctcaatccaaacaca 49946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 52428068 - 52428147
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||| ||||||||| |||||||||| | || |||| |||||||||| ||| ||||||  ||| ||||| |||||    
T  52428068 attttacattggtcgtaattt-aaaaataaaaataagtcctctcctcccttcctctcataaacctacaacccaaatacacc 52428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 211 - 379
Target Start/End: Complemental strand, 15353537 - 15353365
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta---attt-aaaaagacattttacat 306  Q
    ||||||||||||||||||||| ||||||||||||||| ||| || ||||||||| |||||| |||||||||||||   |||| ||||| |||||||||||    
T  15353537 gacattataaaatgatttttagaaaattgaattaacaacattataaatgatcatataatacatcaaaaacacttatttatttcaaaaaaacattttacat 15353438  T
Q  307 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  15353437 tgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccc 15353365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 211 - 379
Target Start/End: Complemental strand, 15323399 - 15323226
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttaca 305  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| |||||| ||| ||||||||||||||     |||| | ||||||||    
T  15323399 gacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcagaaacacttaatttattttaaaaatatattttaca 15323300  T
Q  306 ttgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  15323299 ttgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccc 15323226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 197 - 387
Target Start/End: Original strand, 9051590 - 9051783
Alignment:
Q  197 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 291  Q
    |||||||| |||  || |||||||||||||||||| ||||||||||||||| |||||| ||||||||| |  ||||| ||||||||||||||||     |    
T  9051590 ttttttaaattacggatattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatatgctactttaaaaacacttaatttatttaaa 9051689  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagtt 387  Q
    ||| | |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  9051690 aaaaatattttacattgttcgtaatttaaaaa-taaaagtgagca-tcccctcccttcccctcttaaaccctcaatccaaacacacccttaaagtt 9051783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 23091114 - 23090991
Alignment:
Q  266 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaac 360  Q
    |||||||||||||||||||||||||     |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23091114 taatacttcaaaaacacttaatttagtttaaaaatacattttagattgttcgtaatttaaaagataaaagtgagccctcccctcccttcccctcctaaac 23091015  T
Q  361 cctcaatccaaacacacccataaa 384  Q
    | ||||||||||||||||| ||||    
T  23091014 cttcaatccaaacacacccttaaa 23090991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 176 - 379
Target Start/End: Complemental strand, 10293457 - 10293251
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||| |||||| || |||||| || ||| ||| |||||||||||||||||| |||| |||||| ||| ||| || ||| ||||| ||||||||||    
T  10293457 ggaggggagagcttacttttctttttcaaattacagatattataaaatgatttttagaaaactgaattgacaacatcataaataatcatataatacttca 10293358  T
Q  276 aaaacacttaatttaa---aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||||    |||||||    ||| | |||||||||||||||||||||||||||||||||||||||||||||||  || |  |||||||||| |||||||||    
T  10293357 aaaatcggtaatttattttaaaaatattttacattgttcgtaatttaaaaaataaaagtgagccctcccctctttttctttcctaaacccacaatccaaa 10293258  T
Q  373 cacaccc 379  Q
    |||||||    
T  10293257 cacaccc 10293251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 178 - 379
Target Start/End: Complemental strand, 31799128 - 31798919
Alignment:
Q  178 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaa 277  Q
    ||||||| | |||| || ||||||||| |||  || |||||||||| |||||| |||||||||||||||| |||||| ||||||||| ||||||||||||    
T  31799128 aggggagagtttacttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatgataaatgatcatataatacttcaaa 31799029  T
Q  278 aacacttaattta--------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcc 369  Q
    |||| ||  ||||        |||| ||||||||||||| ||||||||||||||||||||| ||| | || |||| |||  |||||||||||||||||||    
T  31799028 aacattttttttattaaaaaaaaaaaacattttacattgctcgtaatttaaaaaataaaagcgagtcatctcctctcttatcctcctaaaccctcaatcc 31798929  T
Q  370 aaacacaccc 379  Q
    ||||||||||    
T  31798928 aaacacaccc 31798919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 26318475 - 26318345
Alignment:
Q  215 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgt 309  Q
    ||||||||||| ||||| ||||||||||||||| |||||| | ||||||| |||||||||||||||||||||     |||||||| |||||||| ||| |    
T  26318475 ttataaaatgacttttagaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttt 26318376  T
Q  310 tcgtaatttaaaaaataaaagtgagccctcc 340  Q
    |||||||||||||||||||| ||| ||||||    
T  26318375 tcgtaatttaaaaaataaaaatgaaccctcc 26318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 379
Target Start/End: Original strand, 4097305 - 4097479
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-----------aaaaagacat 299  Q
    |||||||||||||  |||||| ||||||||||||||| |||||| |||||||||  |||||||| ||||||||||||||           ||||| ||||    
T  4097305 gacattataaaatattttttagaaaattgaattaacaacatgataaatgatcatacaatacttccaaaacacttaatttatttttaaaaaaaaaaaacat 4097404  T
Q  300 tttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||  ||||||||||||||||||||| | |||||     ||||||||||||||||| |||| |||||||||    
T  4097405 tttacattgttcacaatttaaaaaataaaagtgagtcatcccc-----tcccctcctaaaccctccatcctaacacaccc 4097479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 377
Target Start/End: Original strand, 4097620 - 4097754
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 342  Q
    |||||| || |||||| |||||||||||  ||||||||||||      |||| | || ||| ||||| |||||||||||||| |||||||| |||| |||    
T  4097620 catgataaacgatcatataatacttcaatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacccttccc 4097719  T
Q  343 tcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||| ||||||||||||||||||||||    
T  4097720 tcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 384
Target Start/End: Complemental strand, 10818425 - 10818225
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||||| |||| || | ||||||| |||  |||| ||| ||||| ||||||||| ||| |  ||  | |||||| ||||||||| ||||||||||    
T  10818425 ggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatcatataatacttca 10818326  T
Q  276 aaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    |  |||     |||||||   ||| ||| ||||| |||||||||||||| |||| | | |  ||||||||||||||||||||||||||||||||||||||    
T  10818325 atcaca-----tttaaaa---catgttatattgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacac 10818234  T
Q  376 acccataaa 384  Q
    |||| ||||    
T  10818233 acccttaaa 10818225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 14515542 - 14515474
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| ||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  14515542 cgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 3841284 - 3841180
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgattttt--aaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactt 284  Q
    ||||| || ||||||||| |||  ||||||||||||||||||||  | |||||||||||||||  ||||| |||||| || |||||||||||||||||||    
T  3841284 cttacttttcttttttaaattacggacattataaaatgatttttttacaaaattgaattaacaa-atgataaatgatgatataatacttcaaaaacactt 3841186  T
Q  285 aattta 290  Q
    ||||||    
T  3841185 aattta 3841180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 380
Target Start/End: Original strand, 10818366 - 10818460
Alignment:
Q  286 atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccca 380  Q
    |||| |||| |||||| | | ||| |||||||||||||  |||||| | ||||||||||||| |||||||||||| |||||||||||||||||||    
T  10818366 attttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctcaatccaaacacaccca 10818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 15373669 - 15373739
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaaca 281  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| |||||| |||||||||    
T  15373669 gacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 378
Target Start/End: Original strand, 25468454 - 25468633
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----ttta 290  Q
    ||||||||| |||  ||||||||||||| ||||| | |||||| | |||||| | |||| |||||| || |||||||||||||||||||||     ||||    
T  25468454 cttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtgataaatgattatataatacttcaaaaacacttaatttatttta 25468553  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||| |||        ||||||||||| |||| ||||||||||  ||| ||||||||| ||||| |||||| | ||||||||||||||    
T  25468554 aaaaaaca--------tgttcgtaattaaaaatataaaagtgaatccttccctcccttaccctcttaaaccattaatccaaacacacc 25468633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 30487373 - 30487307
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  30487373 taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 30487307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 34177060 - 34177137
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 373  Q
    ||||||||||||||||||||||||||||||||||||||| | |  ||||||||||  ||||||||| |||||| ||||    
T  34177060 acattttacattgttcgtaatttaaaaaataaaagtgagtcatttcctcccttcctttcctaaaccttcaatctaaac 34177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 9721207 - 9721139
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||| | | ||||||||||||||||||||||||||| |||||||||||||||||    
T  9721207 cgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacaccc 9721139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 9719100 - 9719034
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||  |||| | |  ||||||||||||||||||||||||||||||||||||||||||    
T  9719100 cgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 12811157 - 12811223
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||| || |||||| | |||||||||| |||||| |||||||||||||||||||||||||||    
T  12811157 taatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccc 12811223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 19278213 - 19278278
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||| |||| | | |||||||||||||||||||||||||| ||||||||||||||||    
T  19278213 cgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 23091133 - 23091195
Alignment:
Q  311 cgtaatttaaaaaat-aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||||    
T  23091133 cgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 30487480 - 30487546
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||| |||||||||||||| | | |||||| ||||||||||||||||||||||||||| ||||||||    
T  30487480 cgtagtttaaaaaataaaactaaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 9719178 - 9719274
Alignment:
Q  283 ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccca 380  Q
    ||||||||||||| ||| ||| || || || ||||||||||| |||| | | ||| |||||| ||||||||| |||||||||||||||||||||||||    
T  9719178 ttaatttaaaaag-catgttatatagtccggaatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccca 9719274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 34176606 - 34176711
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||| | ||||| || ||||||||| |||   | |||||||| |||||||||||||||||||||||||  || || ||||||||| ||||| ||||    
T  34176606 ggaggggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatataataaatgatcatataatatttca 34176705  T
Q  276 aaaaca 281  Q
    ||||||    
T  34176706 aaaaca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 665929 - 665842
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| | | | ||| |||||||||||  |||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  665929 aaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccctc-atccaaacacaccc 665842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 15373737 - 15373776
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagc 335  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15373737 acattttacattgttcgtaatttaaaaaataaaagtgagc 15373776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 4097317 - 4097236
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||| ||| ||| ||||||||||||| | | |||  || |||||||||||||||||||||||||||||||||||    
T  4097317 attttataatgtccgtgattcaaaaaataaaagtaaactctcatcttccttcccctcctaaaccctcaatccaaacacaccc 4097236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 31849174 - 31849113
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||| |||| | | |||||||||||||||||||| |||||||||||||| |||||||    
T  31849174 tttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 28477116 - 28477076
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattt 289  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  28477116 catgataaatgatcatgtaatacttcaaaaacacttaattt 28477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 29693014 - 29692974
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattt 289  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  29693014 catgataaatgatcatgtaatacttcaaaaacacttaattt 29692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 34176642 - 34176586
Alignment:
Q  309 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctca 365  Q
    |||||||||||||||| |||||| || | ||||||||| ||||||||||||||||||    
T  34176642 ttcgtaatttaaaaaagaaaagtaagtcttcccctcccatcccctcctaaaccctca 34176586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 5287471 - 5287514
Alignment:
Q  286 atttaaaaagacattttacattgttcgtaatttaaaaaataaaa 329  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  5287471 atttaaaaaaacattttatattgttcgtaatttaaaaaataaaa 5287514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 16738172 - 16738238
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| | | ||||||||| ||||| |||||||||||||||||||||| ||||    
T  16738172 gtaatttaaaaaagaaaagtaaactctcccctcc-ttcccatcctaaaccctcaatccaaacaaaccc 16738238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 30850063 - 30850153
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||| |||| ||| ||  ||| |||||||||| | |||||| | | ||||| || ||| ||||||||||||||||||||||||||||    
T  30850063 tttaaaaaaacatattatataattcataatttaaaataaaaaagtaaactctcccttctctttccctcctaaaccctcaatccaaacacac 30850153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 379
Target Start/End: Original strand, 14515633 - 14515714
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||||| |||||||||||  |||  | | ||||||| | |||||||||||||||||||| ||||||||||||||    
T  14515633 attttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccc 14515714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 9051603 - 9051535
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| | || || ||||| || |||||||||| ||||||||||||| |||||    
T  9051603 cgtaatttaaaaaaaaaaagtaaaccatctcctccatttccctcctaaatcctcaatccaaacgcaccc 9051535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 9298690 - 9298734
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||    
T  9298690 ccctcccctcccttcccctcctaaccccttcatccaaacacaccc 9298734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 10293424 - 10293484
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    ||||||| ||||| |||||| ||| ||||||||||||| |||||||||||||  |||||||    
T  10293424 gtaatttgaaaaagaaaagtaagctctcccctcccttctcctcctaaacccttcatccaaa 10293484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 26318482 - 26318546
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||| |||||| |  | ||||||||||| ||||||||||| ||| ||||||||||||    
T  26318482 taatttaaaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacac 26318546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 379
Target Start/End: Complemental strand, 1300661 - 1300630
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||||||||||    
T  1300661 tcccctcctaaaccctcaatccaaacacaccc 1300630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 5585375 - 5585304
Alignment:
Q  307 tgttcgtaatttaaaaaataaaa-gtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||||||| |||| || | | || || | |||||||||||||||||||| ||||||||||||    
T  5585375 tgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 19278102 - 19278039
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||||||||  |||||| | | ||| ||| |||||||||||||||||||| ||||||||||    
T  19278102 gtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 377
Target Start/End: Original strand, 21607054 - 21607085
Alignment:
Q  346 cttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||||||||||||||||||||||    
T  21607054 cttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 379
Target Start/End: Original strand, 1300789 - 1300863
Alignment:
Q  305 attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||||||||  |||||| | ||||||||||| |||  || | |||||||| ||||||||||||||    
T  1300789 attgtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctccatccaaacacaccc 1300863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 3841247 - 3841329
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | ||| |||||||||||||| |||||| || | |||  |  ||||||||||||||||||  ||||||||||||||    
T  3841247 cattttataatgtccgtaatttaaaaaagaaaagtaagtcttccattttcttcccctcctaaacccttcatccaaacacaccc 3841329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 31849265 - 31849319
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    ||||||||||||| | ||| |||||||||||||  |||||||| |||||||||||    
T  31849265 aaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 31849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 379
Target Start/End: Original strand, 9721285 - 9721380
Alignment:
Q  283 ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||| |||| ||| || || || ||||||||||| |||| | | ||| |||||| ||| || || |||||||||||| |||||||||||    
T  9721285 ttaatttaaaaa-acatgttatatggtccggaatttaaaaaagaaaattaaacccacccctctcttaccttcataaaccctcaattcaaacacaccc 9721380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 33041513 - 33041473
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||| |||| ||||||||||| ||||||||||||||    
T  33041513 ctcccctcctttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 33236020 - 33235952
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| | |  ||| |||||||| || |||||| |||||||||||| ||||||    
T  33236020 cgtaatttaaaaaagaaaagtaaactttccactcccttctccacctaaatcctcaatccaaatacaccc 33235952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 385
Target Start/End: Complemental strand, 31061547 - 31061354
Alignment:
Q  197 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 291  Q
    |||||||| ||| |||||||||||| ||| ||||  ||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||     |    
T  31061547 ttttttaaattacagacattataaagtgactttttgaaaattgaattaacaacatgataaatgatcatataatatttcaaaaacacttaatttattttaa 31061448  T
Q  292 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaag 385  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||    
T  31061447 aaacacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacacccttaaag 31061354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 196 - 379
Target Start/End: Complemental strand, 45257496 - 45257308
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| |||  || |||||||||||||||||  |||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||         
T  45257496 cttttttaaattacggatattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttatttta 45257397  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    | || |||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||    
T  45257396 agaaaacattttacattgttcgtaatttataaaataaaagtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccc 45257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 187 - 379
Target Start/End: Original strand, 42296349 - 42296546
Alignment:
Q  187 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 286  Q
    ||||| || ||||||||| |||  || |||||||||||| ||||| |||| |||||||||| ||| || ||||||||| ||||| || ||||||||||||    
T  42296349 cttacttttcttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacataataaatgatcatataataatttaaaaacacttaa 42296448  T
Q  287 tt-----taaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||     |||||| | ||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  42296449 ttcattttaaaaaaatattttacatcgttcgtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccc 42296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 218 - 372
Target Start/End: Complemental strand, 33265773 - 33265615
Alignment:
Q  218 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgt 313  Q
    |||||||||||||  |||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||    |||| |  |||||||||||||||    
T  33265773 taaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaatgttttacattgttcgt 33265674  T
Q  314 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    |||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||    
T  33265673 aatttaaaaaataaaaatgagtcatcgcctcccttcccctcctaaaccctcaatccaaa 33265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 378
Target Start/End: Original strand, 3094427 - 3094595
Alignment:
Q  215 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgt 309  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||| ||||| |||||||||||||||||     ||| |||| ||| ||||||||||| ||    
T  3094427 ttataaaatgattcttagaaaattgaattaacaacatgataaataatcatataatacttcaaaaacacgaaatttattttagaaaaacattttacatagt 3094526  T
Q  310 tcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    | ||||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||    
T  3094527 ttgtaatttaaaaaataaaagtgagtcttcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 197 - 380
Target Start/End: Original strand, 1052811 - 1053001
Alignment:
Q  197 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------ 290  Q
    |||||||| |||  || |||||||||| ||||||| ||||||||||||||| |||||| ||||||| | ||||| |||||||||| ||||||||          
T  1052811 ttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatgataaatgatcgtataatatttcaaaaacatttaatttatttaaa 1052910  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc-ctcctaaaccctcaatccaaacacaccca 380  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||| ||||||||||| |||||||    
T  1052911 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagctctcctctcctttcccgctcctaaactctcaatccaaatacaccca 1053001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 214 - 379
Target Start/End: Original strand, 2381060 - 2381230
Alignment:
Q  214 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattg 308  Q
    |||||||||||| ||||| ||||||||||| ||| ||||||  ||||| || |||||||||||||||||||||||||     |||| |||||||||||||    
T  2381060 attataaaatgaattttagaaaattgaattgacaacatgattgatgatgatataatacttcaaaaacacttaatttattttaaaaaaacattttacattg 2381159  T
Q  309 ttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||||||| | |||||||||| | ||||| ||||||| ||||||||| ||||||    
T  2381160 ttcgtaatttaaaaaataaaagtgaactctcccctcccattccctcataaacccacaatccaaatacaccc 2381230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 218 - 373
Target Start/End: Original strand, 31928121 - 31928286
Alignment:
Q  218 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----------aaaagacattttacatt 307  Q
    |||||||||||||  ||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||          |||| ||||||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaaacattttacatt 31928220  T
Q  308 gttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaac 373  Q
    ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  31928221 gtttgtaatttaaaaattaaaagtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 211 - 384
Target Start/End: Complemental strand, 34187751 - 34187571
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgta--atacttcaaaaacacttaattta-----aaaagacatttta 303  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||||| || ||  |||||||||||||||||||||||     | || |||| |||    
T  34187751 gacattataaaatgatttttagaaaattgaattaacaacatgataaatgattatatataatacttcaaaaacacttaatttattttaataaaacatctta 34187652  T
Q  304 cattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    | |||||||||||||||||| ||||||||| || |||||| |||||| ||||||||| |||||||||||||||||| ||||    
T  34187651 cgttgttcgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacacccttaaa 34187571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 15085770 - 15085911
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttac 304  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||      |||| | ||||||     
T  15085770 gacattataaaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttcaaaaacacttaatttattttttaaaaaatattttat 15085869  T
Q  305 attgttcgtaatttaaaaaataaaagtgagccctcccctccc 346  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  15085870 attgttcgtaatttaaaaaataaaagcgagccctcccatccc 15085911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 258 - 379
Target Start/End: Original strand, 1270394 - 1270521
Alignment:
Q  258 tgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc 351  Q
    ||||||| ||| |||||||||||||||||||||      |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  1270394 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtc 1270493  T
Q  352 ctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||||||||||||| |||||    
T  1270494 ctcctaaatcctcaatccaaacgcaccc 1270521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 198 - 376
Target Start/End: Complemental strand, 35325456 - 35325271
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------a 290  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||| | |||||| ||||||||| |||||||||||||| |||||||||       |    
T  35325456 tttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgataaatgatcatataatacttcaaaaatacttaatttattttaaa 35325357  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||| | |||||||||||||||||||| ||||||||||||| || | | |||| | || | ||||||||||||||||  |||||||    
T  35325356 aaaatatattttacattgttcgtaattaaaaaaataaaagtaagtcattcccttcatttctctcctaaaccctcaatttaaacaca 35325271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 199 - 331
Target Start/End: Complemental strand, 45098355 - 45098218
Alignment:
Q  199 ttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaa 293  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||     |||||||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaa 45098256  T
Q  294 agacattttacattgttcgtaatttaaaaaataaaagt 331  Q
    | |||||||||||| || ||||| ||||||||||||||    
T  45098255 atacattttacattatttgtaatgtaaaaaataaaagt 45098218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 266 - 379
Target Start/End: Original strand, 17333936 - 17334055
Alignment:
Q  266 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaa-aataaaagtgagccctcccctcccttcccctcctaaa 359  Q
    |||||||||||||||||||||||||     |||||||||||||||||||| |||| |||||| |||||||||||| |||||||| |||||||||||||||    
T  17333936 taatacttcaaaaacacttaatttattttaaaaagacattttacattgtttgtaacttaaaaaaataaaagtgagtcctccccttccttcccctcctaaa 17334035  T
Q  360 ccctcaatccaaacacaccc 379  Q
    |||||||| |||| ||||||    
T  17334036 ccctcaattcaaaaacaccc 17334055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 22356179 - 22356247
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  22356179 cgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccc 22356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 23748250 - 23748338
Alignment:
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| | | ||| |||| ||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  23748250 aaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 23748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 36052118 - 36052230
Alignment:
Q  172 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 271  Q
    |||||||||||| | ||||| || || |||||| ||| | |||||||||||||||||||| ||||||||||||||| ||| ||  |||||||| | ||||    
T  36052118 tttaggaggggacgacttacttttctattttaaattacatacattataaaatgatttttagaaaattgaattaacaacatcatacatgatcatatgatac 36052217  T
Q  272 ttcaaaaacactt 284  Q
    |||||||||||||    
T  36052218 ttcaaaaacactt 36052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 392
Target Start/End: Complemental strand, 22356093 - 22355963
Alignment:
Q  257 atgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc 351  Q
    ||||| || ||||||||||||||||||||||     ||||||| |||||||||||||||||||||||||||||||||| |||            | ||||    
T  22356093 atgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatga----------atcatccc 22356004  T
Q  352 ctcctaaaccctcaatccaaacacacccataaagtttacta 392  Q
    ||| |||||||||||||||||||||||| ||||||||||||    
T  22356003 ctcttaaaccctcaatccaaacacacccgtaaagtttacta 22355963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 35736365 - 35736430
Alignment:
Q  314 aatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  35736365 aatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccc 35736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 35736240 - 35736176
Alignment:
Q  315 atttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||| |||| | | |||||||||||||||||||||||||||||||||||||||||||||    
T  35736240 atttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 35736176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 36347716 - 36347784
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| | | ||||| |||||||||||||||||||||||||||||||||||||    
T  36347716 cgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccc 36347784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 41778902 - 41778774
Alignment:
Q  256 aatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcc 350  Q
    ||||||||| |||||||||||  ||||||||||||     |||| |||||||| | ||| | |||||||||  | |||||| | |||||||||||||| |    
T  41778902 aatgatcatataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttc 41778803  T
Q  351 cctcctaaaccctcaatccaaacacaccc 379  Q
    ||| |||||||||||||||||||||||||    
T  41778802 ccttctaaaccctcaatccaaacacaccc 41778774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 15224802 - 15224937
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |  |||||||||||||| |||||| | || ||||||    
T  15224802 catgataaatgatcatataatacttcaatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccct 15224901  T
Q  344 cccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||||||||  ||||||||||||||    
T  15224902 cccttcccctcctaaacccttgatccaaacacaccc 15224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 378
Target Start/End: Complemental strand, 16713628 - 16713494
Alignment:
Q  249 catgatcaatgatcatgtaatacttcaaaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    |||||| |||||  || ||||||||||||||||| ||||||     ||||| | |||||| ||||| ||||||||||||| ||||| ||| |  |||| |    
T  16713628 catgataaatgaatatataatacttcaaaaacacataatttcttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatccctt 16713529  T
Q  344 cccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||| ||||||||||||| |||||||||    
T  16713528 cccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 42813781 - 42813863
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | |||||||||||||||||| |||| | |||| ||||||| ||||||||||||||||||  ||||||||||||||    
T  42813781 cattttataatgttcgtaatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccc 42813863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 8554369 - 8554446
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 288  Q
    ||||||||||||| |||||| |||||||||||||||| |||||| ||||||| |  ||||||||||||||||| ||||    
T  8554369 gacattataaaataattttttaaaaattgaattaacatcatgataaatgatcgtacaatacttcaaaaacactcaatt 8554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 9313188 - 9313079
Alignment:
Q  184 gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatc----atgtaatacttcaaaaa 279  Q
    |||||||| || | ||||||| ||| |||||||||||||||||||||  ||||||||||||||| | |||| |||||||    || | ||||||||||||    
T  9313188 gggcttacttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttgataaatgatcgatcatattatacttcaaaaa 9313089  T
Q  280 cacttaattt 289  Q
    ||||||||||    
T  9313088 cacttaattt 9313079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 17379891 - 17379847
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17379891 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 17379847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 345
Target Start/End: Complemental strand, 21502204 - 21502067
Alignment:
Q  214 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------aaaaagacattttacat 306  Q
    |||||||||| ||||| | ||||||| ||||||| || ||| |||| |||| ||||||||||||||||||||||||       ||||| | |||||| ||    
T  21502204 attataaaataattttaagaaaattgcattaacaacaagataaatggtcatataatacttcaaaaacacttaatttatttttaaaaaaaatattttatat 21502105  T
Q  307 tgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    |||||||||||| |||||||||  ||| |||||||||||    
T  21502104 tgttcgtaattt-aaaaataaatctgaaccctcccctcc 21502067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 371
Target Start/End: Complemental strand, 887051 - 886927
Alignment:
Q  250 atgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctc 344  Q
    ||||| ||||||||| |||||||||||  |||| |||||||     ||||  ||||||| |||||  ||||||||||||| |||||| ||||||||| |     
T  887051 atgataaatgatcatataatacttcaatcacacataatttattttaaaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctccctta 886954  T
Q  345 ccttcccctcctaaaccctcaatccaa 371  Q
    |||||||||||||||||||||| ||||    
T  886953 ccttcccctcctaaaccctcaacccaa 886927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 36046377 - 36046443
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||| |||||| | || ||||||||||||||||| |||||||||||||||||||||||    
T  36046377 cgtaatttaaaaaacaaaagtaaacc-tcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 376
Target Start/End: Original strand, 23739882 - 23739996
Alignment:
Q  267 aatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaacc 361  Q
    ||||||||||||||| ||||||||     |||| ||||||||| || |||||||||||||||||||| || |||||||| | | ||| |||||||||| |    
T  23739882 aatacttcaaaaacatttaatttattttaaaaaaacattttacttttttcgtaatttaaaaaataaatgttagccctcctccctctttccctcctaaatc 23739981  T
Q  362 ctcaatccaaacaca 376  Q
    ||| || ||||||||    
T  23739982 ctcgattcaaacaca 23739996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 42813828 - 42813726
Alignment:
Q  177 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 276  Q
    ||||||| ||||||  || ||||||||| |||   |||||||||||||||||||| ||||||||||||||| | |||| ||| ||||| |||||||| ||    
T  42813828 gaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacctgataaataatcatataatactttaa 42813729  T
Q  277 aaa 279  Q
    |||    
T  42813728 aaa 42813726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 887285 - 887352
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||| || ||||| ||||||||    
T  887285 cgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaaccttc-atccagacacaccc 887352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 31795838 - 31795772
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||  |||||| || |||||||||||||| |||| ||||||||| ||||||||||||    
T  31795838 cgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 2381057 - 2380996
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctccc-ttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||||||||||    
T  2381057 tttaaaaaagaaaaatgagtcctcccctccccttcccctcctaaaccctctatccaaacaca 2380996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 17380043 - 17380084
Alignment:
Q  338 tcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  17380043 tcccctcacttcccctcctaaaccctcaatccaaacacaccc 17380084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 45257482 - 45257559
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttt 388  Q
    |||||||||||||| |||||| | || || ||||||||||| ||||||| |||| ||||||||||||||  |||||||    
T  45257482 cgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccctaaaagttt 45257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 9631735 - 9631803
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |||||  ||||||| ||||||||||||||| ||||||||||||||    
T  9631735 cgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccc 9631803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 8427051 - 8427110
Alignment:
Q  316 tttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||||  |||||| | | |||||||||||| ||||||||||||||||||||||||||    
T  8427051 tttaaaaatgaaaagtaaactctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 14196819 - 14196878
Alignment:
Q  286 atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    |||| |||| |||||||| | |||||||||||||||||| |||||| |||||||||||||    
T  14196819 attttaaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcccctcc 14196878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 31061543 - 31061598
Alignment:
Q  319 aaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||    
T  31061543 aaaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 384
Target Start/End: Original strand, 33265767 - 33265845
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||         |||||||||||||||||||| |||| ||||||    
T  33265767 cattttacattgttcataatttaaaaaataaaagcgagtcctcccct---------tcctaaaccctcaatccaaatacacacataaa 33265845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 9427053 - 9426987
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||| ||||   | ||||| ||||||||||||||||||||  ||||||||||||||||    
T  9427053 gtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaactttcaatccaaacacacc 9426987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 41841750 - 41841684
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||| ||||   | ||||||| |||||| |||||||||| ||||||||||||||||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 8426946 - 8426881
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||| ||| || |||| |||||    
T  8426946 taatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacacc 8426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 380
Target Start/End: Complemental strand, 36046273 - 36046204
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccca 380  Q
    |||||||||||||  |||| | | | ||||||||  |||||||||||||||||| |||||||||||||||    
T  36046273 cgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacaccca 36046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 36347610 - 36347542
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| ||||||  |||||||| | ||| | |||||||||||||||||||||  ||||||||||||||    
T  36347610 cgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaacccttcatccaaacacaccc 36347542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 40022407 - 40022364
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||    
T  40022407 ccctcccc-cccttaccctcctaaaccctcaatccaaacacaccc 40022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 2241479 - 2241413
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||| || | |||||| | | |||||||||||||||||||| ||||||||||| |||||||||    
T  2241479 cgtaatttataataaaaaagtaaactctcccctcccttcccctcct-aaccctcaatctaaacacacc 2241413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 377
Target Start/End: Complemental strand, 12541808 - 12541773
Alignment:
Q  342 ctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||| ||||||||||||||||||||||||||||||    
T  12541808 ctcccctcccctcctaaaccctcaatccaaacacac 12541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 372
Target Start/End: Complemental strand, 15224188 - 15224153
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    |||||||||||||||||||||||||||| |||||||    
T  15224188 ctcccctcccttcccctcctaaaccctccatccaaa 15224153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 379
Target Start/End: Original strand, 31795968 - 31796007
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaacaaaccc 31796007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 40022524 - 40022615
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||| |||||| | | |||  ||||||||||||  ||| || | ||||||||||||||| |||| ||||||||| |||||| ||||||    
T  40022524 tttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacacc 40022615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 17331478 - 17331416
Alignment:
Q  317 ttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| |||||| | ||||||||||| |||||||||| |||||||  | |||||||||||    
T  17331478 ttaaaaaagaaaagtaaaccctcccctcctttcccctccttaaccctctttgcaaacacaccc 17331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 31795804 - 31795918
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||| ||||| || | ||||||| |||  |||| ||| ||| | ||||| ||||| | || ||||| |||||| || |||||| ||||||||||    
T  31795804 ggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaataacaacatgataaacgatcatataatacttca 31795903  T
Q  276 aaaacacttaattta 290  Q
    |  ||||||||||||    
T  31795904 atcacacttaattta 31795918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 377
Target Start/End: Original strand, 36567063 - 36567093
Alignment:
Q  347 ttcccctcctaaaccctcaatccaaacacac 377  Q
    |||||||||||||||||||||||||||||||    
T  36567063 ttcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 19567020 - 19567057
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  19567020 ccctcccctcctctcctaaaccctcaatccaaacacac 19567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 8554446 - 8554494
Alignment:
Q  331 tgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||||| |||||||| |||||  |||||||||||||||||    
T  8554446 tgagtcctcccctccattcccctcttaaactttcaatccaaacacaccc 8554494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 14187111 - 14187167
Alignment:
Q  178 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaa 234  Q
    |||||||||||||| || ||||||||| ||| | ||||||||||||| |||| ||||    
T  14187111 aggggagggcttacttttcttttttaaattataaacattataaaatgtttttgaaaa 14187167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 247
Target Start/End: Complemental strand, 22356173 - 22356141
Alignment:
Q  215 ttataaaatgatttttaaaaaattgaattaaca 247  Q
    ||||||||||||||||| |||||||||||||||    
T  22356173 ttataaaatgatttttagaaaattgaattaaca 22356141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 379
Target Start/End: Complemental strand, 41414313 - 41414079
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattcctttttt-aatttaaagacattataaaatgatttttaaaaaattgaattaacagc 249  Q
    |||||||||||||   | |||||||||||||||| | |||| || ||||||| || | |  ||||||||||||||||||||| |||||||| |||||| |    
T  41414313 agggtgtgtttggatggtgggtttaggaggggagtgtttacttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaac 41414214  T
Q  250 atgatcaatgatcatgtaatacttcaaaaac-----acttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctc 344  Q
    ||||| ||||||||| |||||||||||||||     | ||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  41414213 atgataaatgatcatataatacttcaaaaacgcttgatttattttaaaaaaacattttaccttgttcataatttaaaaaataaaagtgagccctcccctc 41414114  T
Q  345 ccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||||||||||||||||||| ||||| ||||    
T  41414113 cctttccctcctaaaccctcaatctaaacataccc 41414079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 152 - 341
Target Start/End: Complemental strand, 40858798 - 40858604
Alignment:
Q  152 gggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcat 251  Q
    ||||||||||||   |||||||||||||||||||| |||  || ||||||||| |||  |||||||||||||||| |||  ||||||||||||||| |||    
T  40858798 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacat 40858699  T
Q  252 gatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 341  Q
    ||| ||||||||| |||||||||||||||||     ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40858698 gataaatgatcatataatacttcaaaaacactaaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 40858604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 178 - 374
Target Start/End: Original strand, 16884010 - 16884209
Alignment:
Q  178 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaa 277  Q
    ||||||||||||||||| ||||||||||||| | | || ||||||  | |||||||||||||||| |||| |||||| ||||||||| ||||||||||||    
T  16884010 aggggagggcttacatttcttttttaatttacaaatat-ataaaaaaaattttaaaaaattgaat-aacaacatgataaatgatcatataatacttcaaa 16884107  T
Q  278 aacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaa 372  Q
    |||||||||||||     ||||||||||||||||||||||||| |||||||||||||||||| | |  | |||||||| |||||||||||||||||||||    
T  16884108 aacacttaatttattttaaaaagacattttacattgttcgtaacttaaaaaataaaagtgagtcttatcatcccttcctctcctaaaccctcaatccaaa 16884207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 196 - 374
Target Start/End: Original strand, 10943669 - 10943852
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||||||||| ||| || ||| || || |||||||||||||||||||||||||         
T  10943669 cttttttaaattatagatattataaaatgatttttagaaaattgaattaacaacataataaataattatataatacttcaaaaacacttaatttatttta 10943768  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||| ||||||| |||||||||||||||||||| ||||||||| |||||||||| ||| ||||| |||||||||||||||||||    
T  10943769 aaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaaccctcccctctctttccctcataaaccctcaatccaaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 176 - 345
Target Start/End: Complemental strand, 34641199 - 34641027
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||||||||||||||| || ||||||||| |||  ||||||||||||||||||  | ||||||||||||||| |||||| ||||||||| ||||||||||    
T  34641199 ggaggggagggcttacttttcttttttaaattacggacattataaaatgattt--agaaaattgaattaacaacatgataaatgatcatataatacttca 34641102  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    |||||||||||||||     ||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  34641101 aaaacacttaatttattttaaaaaatccttttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 34641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 196 - 376
Target Start/End: Original strand, 17474261 - 17474446
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| |||  ||||||||||||| |||||| ||||||||||||||||  ||||| ||| ||||  |||||||||||||||||||||||||         
T  17474261 cttttttaaattacggacattataaaataattttttaaaaattgaattaacaatatgataaataatcaaataatacttcaaaaacacttaatttattttt 17474360  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||| | |||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||    
T  17474361 aaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 199 - 377
Target Start/End: Original strand, 21090129 - 21090312
Alignment:
Q  199 ttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaa 293  Q
    |||||| ||| ||| ||||||||| |||||||  ||||||||||||||| ||||||  || ||||| |||||||||||||||||||||||||     |||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatatattatcatataatacttcaaaaacacttaatttattttaaaa 21090228  T
Q  294 agacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    | | |||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||| |||||||||||||||    
T  21090229 aaatattttacattgttcataatttaaaaaataaaagtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 151 - 345
Target Start/End: Complemental strand, 48683848 - 48683647
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattc-cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 249  Q
    |||||||||||||  ||||||||||||||||||||| |||  ||  ||||||||| |||   ||||||||||||||||||||  |||||||||||||| |    
T  48683848 agggtgtgtttggatagagggtttaggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaac 48683749  T
Q  250 at-gatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccct 343  Q
    || ||| ||||||||| ||||| |||||||||||||||||||     |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  48683748 attgataaatgatcatataatatttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaagaaataaaagtgagtcctcccct 48683649  T
Q  344 cc 345  Q
    ||    
T  48683648 cc 48683647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 218 - 379
Target Start/End: Complemental strand, 44412528 - 44412362
Alignment:
Q  218 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcg 312  Q
    |||||||||||||  ||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||     |||| |  ||||||||||||||    
T  44412528 taaaatgattttttgaaaattgaattaacaacatgataaatcatcatataatacttcaaaaacacttaatttattttaaaaaaatgttttacattgttcg 44412429  T
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||  |||| |||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  44412428 taatttaaaaataaaaaatgagtcctcccctctcttcccctcctaaaccctcaattcaaacacaccc 44412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 196 - 379
Target Start/End: Complemental strand, 24253911 - 24253722
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| |||  ||||||||||||||| ||||| ||| ||||||||||| |||||| |||||| || ||| |||||||||||||||||||||         
T  24253911 cttttttaaattacggacattataaaatgagttttagaaagttgaattaacaacatgataaatgattatataacacttcaaaaacacttaatttatttta 24253812  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc-tcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||   ||||||||||| || ||||||||||| ||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||    
T  24253811 aaaaattattttacattgctcataatttaaaaattaaaagtgaacactccccctccctttccctcctaaaccctcaatccaaacacaccc 24253722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 167 - 378
Target Start/End: Complemental strand, 42772250 - 42772046
Alignment:
Q  167 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgt 266  Q
    ||||||||||||||||| || |||| || ||| || || |||  ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||| |    
T  42772250 gagggtttaggaggggaaggtttactttgcttcttaaaattacggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatat 42772151  T
Q  267 aatacttcaaaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaa 366  Q
    ||||||||||||||||||||||||        ||||  |      ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  42772150 aatacttcaaaaacacttaattta-------tttttcaaaaaaaagtaatttaaaaaataaaagtgagtcctcccctcccttcccctcttaaaccttcaa 42772058  T
Q  367 tccaaacacacc 378  Q
    ||||||||||||    
T  42772057 tccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 176 - 375
Target Start/End: Complemental strand, 26136006 - 26135807
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    |||| |||||| |||| || ||||||||| |||  ||||||||||||| ||||||  |||||||||||||||  ||||| ||| || || ||||||||||    
T  26136006 ggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaattaacaatatgataaataattatataatacttca 26135907  T
Q  276 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatcca 370  Q
    |||||||||||||||     |||| |||||||||||||||| ||||||||||||||||||||||      ||||||||| | ||||||||||||||||||    
T  26135906 aaaacacttaatttatttttaaaaaacattttacattgttcataatttaaaaaataaaagtgag-----tcctcccttctcttcctaaaccctcaatcca 26135812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 368
Target Start/End: Original strand, 18086019 - 18086218
Alignment:
Q  180 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgat-caatgatcatgtaatacttcaaaa 278  Q
    ||||| |||||| || ||||||||| ||| ||||||||||||||| |||||| ||||||||||||||| ||| ||  |||||||||  ||||||||||||    
T  18086019 gggagagcttacttttcttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataataaaatgatcataaaatacttcaaaa 18086118  T
Q  279 acacttaattt----------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatc 368  Q
    |||||||||||          ||||| ||| ||||||||||| |||||||||||||||| |||||||| | ||||||| ||||||| |||||||||||||    
T  18086119 acacttaatttatttgagaaaaaaaaaacaatttacattgttagtaatttaaaaaataatagtgagccttaccctcccatcccctcataaaccctcaatc 18086218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 44412522 - 44412603
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||    
T  44412522 cattttacattgttcgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 177 - 339
Target Start/End: Original strand, 8432297 - 8432462
Alignment:
Q  177 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 276  Q
    ||||||||| ||||| ||  |||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||| ||  | |||||||||||    
T  8432297 gaggggaggacttacttt--tttttttaattacagacattataaaatgatttttacaaaattgaattaacaacatgataaataattttataatacttcaa 8432394  T
Q  277 aaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctc 339  Q
    ||||||||||     |||||||| ||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  8432395 aaacacttaattcattttaaaaaaacatttttcattgttcgtagtttaaaaattaaaattgaaccctc 8432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 345
Target Start/End: Complemental strand, 46978594 - 46978462
Alignment:
Q  218 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcg 312  Q
    |||||||||||||| |||||| |||||||| |||||| |||||| || |||||||||||||||| ||||     |||||||| ||||||||||  |||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgataaatgattatataatacttcaaaaacatttaatttattttaaaaaaacattttacaccgttcg 46978495  T
Q  313 taatttaaaaaataaaagtgagccctcccctcc 345  Q
    ||||||||||| ||||||||| |||||||||||    
T  46978494 taatttaaaaattaaaagtgaaccctcccctcc 46978462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 226 - 379
Target Start/End: Original strand, 27197734 - 27197892
Alignment:
Q  226 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaa 320  Q
    |||||| ||||||||||||||| ||||||  |||||||| |||||||| ||| | ||||||||||     |||| | || ||||||||||||||||||||    
T  27197734 tttttagaaaattgaattaacaacatgatagatgatcatataatactttaaatatacttaatttattttaaaaaaatatgttacattgttcgtaatttaa 27197833  T
Q  321 aaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||  || ||||| ||| |||||| ||||| |||||||||||    
T  27197834 aaaataaaagtgagtcctcctttctcttcctctcttaaaccttcaattcaaacacaccc 27197892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 198 - 345
Target Start/End: Original strand, 42699669 - 42699821
Alignment:
Q  198 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aa 292  Q
    ||||||| |||  ||||||||||||| | ||||| |||||||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||      |    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatgataaatgatcatataatacttcaaaaacacttaatttatttttta 42699768  T
Q  293 aagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
    || | |||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  42699769 aaaatattttatattgttcgtaatttaaaaacaaaaagtgagtcctcccctcc 42699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 34641151 - 34641233
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34641151 cattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccc 34641233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 336 - 469
Target Start/End: Complemental strand, 12790417 - 12790296
Alignment:
Q  336 cctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagtttactaattatacnnnnnnntaaataaataattagattaagggagtcac 435  Q
    ||||| ||| ||||| |||||||||||||||||||||||||      |||||||| ||||||||        ||||||| ||||||||||||||||||||    
T  12790417 cctcctctctcttcctctcctaaaccctcaatccaaacaca------aagtttaccaattatacaaa-----aaataaa-aattagattaagggagtcac 12790330  T
Q  436 atagatagaaatgtagtgtaaaatgcaacaatgc 469  Q
    |||||||||||||||| |||||||||||||||||    
T  12790329 atagatagaaatgtagcgtaaaatgcaacaatgc 12790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 24560310 - 24560218
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||| |||| |||||| || |||||||||||||| ||||   | ||||||||||||||||||||||||||||| |||||||||||||||    
T  24560310 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccc 24560218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 28582684 - 28582752
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||| ||||| |||||||||||||    
T  28582684 cgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccc 28582752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 5961933 - 5962011
Alignment:
Q  300 tttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||| ||||||| ||||| ||||||||| | || |||||||| |||||||||||||||||| |||||||||||    
T  5961933 tttacattgtttgtaattttaaaaacaaaagtgagtcttcacctccctt-ccctcctaaaccctcaatacaaacacaccc 5962011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 24253883 - 24253965
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| | ||| |||||||||||||| |||||| |  ||| |||||||||||||| |||||||||| ||||||||||||||    
T  24253883 cattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccc 24253965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 315
Target Start/End: Complemental strand, 36727349 - 36727242
Alignment:
Q  212 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta---atttaaaaag-acattttacatt 307  Q
    |||||||||||| ||||| | |||||| | |||||| |||||| ||| ||||| ||||||||||||||||||||   |||| ||||| ||||||||||||    
T  36727349 acattataaaataattttaagaaaattaacttaacaacatgataaattatcatataatacttcaaaaacacttatttattttaaaagaacattttacatt 36727250  T
Q  308 gttcgtaa 315  Q
    ||| ||||    
T  36727249 gttagtaa 36727242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 55428554 - 55428619
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||| || |||||| |  | |||||||||||||||||||||||||||||||||||||||    
T  55428554 cgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 220548 - 220640
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| ||| |||| |||||| || |||||||||||||| |||||| |   ||||||||||||| |||||||||||||| ||||||||| ||||    
T  220548 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccc 220640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 26135959 - 26136039
Alignment:
Q  298 attttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||| | ||| |||||||||||||| |||||| | |||||| ||||||||||||||||||||||| || ||| ||||||    
T  26135959 attttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacacc 26136039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 6803377 - 6803454
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagttta 389  Q
    ||||||||||||| |||| | | | ||| |||| |||||||||||||||| ||||||||||||||| | |||||||||    
T  6803377 gtaatttaaaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacacacttaaagttta 6803454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 27541998 - 27541937
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||||||||||  ||| |||| || || ||||||||||||||||||||||||||||||||||    
T  27541998 taatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 379
Target Start/End: Original strand, 30200098 - 30200338
Alignment:
Q  151 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattga---attaaca 247  Q
    |||||||||||||   |||||||||||||||||||| |||  || | ||||||| |||  |||| ||| ||||| |||||||||| || |   |||||||    
T  30200098 agggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaaca 30200197  T
Q  248 gcatgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccc 342  Q
      || | ||| |||||| || ||||| ||  |||||| |||||      ||| |||| ||| || || |||||||||||||| |||||| | |||| |||    
T  30200198 taataaacaacgatcatatagtactttaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacccttccc 30200297  T
Q  343 tcccttcccctcctaaa----ccctcaatccaaacacaccc 379  Q
    ||||||||||||||| |    ||||||||||||||||||||    
T  30200298 tcccttcccctcctataccctccctcaatccaaacacaccc 30200338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 41110496 - 41110569
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    |||||||||||||  |||||| | || ||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  41110496 cgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacacccttaaa 41110569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 374
Target Start/End: Original strand, 54985696 - 54985943
Alignment:
Q  144 tttattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaatt 243  Q
    |||| |||| ||||||||||   |||||||||| ||| ||| |||||  || | ||||||| |||  ||||||||||| ||||||||| |||||||||||    
T  54985696 tttactaagagtgtgtttggattgagggtttagaaggagagagcttagttttcgtttttaaattacggacattataaattgatttttagaaaattgaatt 54985795  T
Q  244 aacagcatgat-------caatgatcatgtaatacttc-----aaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaata 326  Q
    ||||  |||||        ||||||||| |||||||||     ||||||||||||||||     |||  ||||||||||||  | ||||||||||||||     
T  54985796 aacaatatgataaatgaataatgatcatataatacttcaaaaaaaaaacacttaatttattttgaaagaacattttacattagttgtaatttaaaaaatt 54985895  T
Q  327 aaagtgagccctcccctcccttcccctcctaaaccctcaatccaaaca 374  Q
    |||  ||   ||| | || |||||||| ||||||||||||||||||||    
T  54985896 aaaacgaattctctcatctcttccccttctaaaccctcaatccaaaca 54985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 18654802 - 18654842
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 24560393 - 24560460
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||  |||||| | | ||||| ||| |||||||||||||||||| ||||||||||||||    
T  24560393 gtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacaccc 24560460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 41110390 - 41110323
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||  |||||| | || || ||||||||||||||||||| |||| |||||||||||||    
T  41110390 cgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacacc 41110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 379
Target Start/End: Original strand, 37102348 - 37102382
Alignment:
Q  345 ccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||||||||||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacaccc 37102382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 5903603 - 5903550
Alignment:
Q  326 aaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||| | ||||||||| |||||||||| |||| |||||||||||||||||||    
T  5903603 aaaagtaaaccctcccctgccttcccctcttaaatcctcaatccaaacacaccc 5903550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 28581254 - 28581189
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||  |||| | | |||||||||||||||| || |||||||||| ||||||||||||    
T  28581254 gtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaacacac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 55428553 - 55428492
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatact 272  Q
    ||||||| || |||||||||| ||||||||||||||| | |||| ||||||||| |||||||    
T  55428553 gacattacaagatgatttttagaaaattgaattaacaacgtgataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 21773851 - 21773783
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||| |||| ||||||   |||| || ||||||||||||||||||| |||||||||||| ||||    
T  21773851 cgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaacataccc 21773783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 25655043 - 25654991
Alignment:
Q  307 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaa 359  Q
    |||||||||| ||||||  |||||| | |||||||||||||||||||||||||    
T  25655043 tgttcgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 25655171 - 25655215
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||    
T  25655171 ccctcccctcccttctcctcttcaaccctcaatccaaacacaccc 25655215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 37102155 - 37102243
Alignment:
Q  147 attaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaa 235  Q
    |||||||||||||||||   |||||||||||||||||||| |||  || | ||||||| |||  |||| ||| ||||| ||||||||||    
T  37102155 attaagggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaa 37102243  T

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Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 54574563 - 54574599
Alignment:
Q  343 tcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||| |||||||||||||||||||||||||||    
T  54574563 tcccttcccttcctaaaccctcaatccaaacacaccc 54574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 379
Target Start/End: Complemental strand, 651776 - 651741
Alignment:
Q  344 cccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||||||||||||||||||||||||||    
T  651776 ccctccccctcctaaaccctcaatccaaacacaccc 651741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 8432321 - 8432262
Alignment:
Q  320 aaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||| || ||||||||| ||||||||| ||||||||| || |||||||||||    
T  8432321 aaaaaaaaaagtaagtcctcccctctcttcccctcgtaaaccctccattcaaacacaccc 8432262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 375
Target Start/End: Original strand, 9312673 - 9312708
Alignment:
Q  340 ccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||| ||||||||||||||||||||||||||||    
T  9312673 ccctcccctcccctcctaaaccctcaatccaaacac 9312708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 14898044 - 14897981
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    ||||||||||||| |||||| |    ||| ||||||||||||||||||| ||||||||||||||    
T  14898044 gtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 23028101 - 23028168
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||||||||  |||||| || ||| |||||  ||||||||| |||||||| |||||||||||||    
T  23028101 cgtaatttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacacacc 23028168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 52474090 - 52474141
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccc 362  Q
    |||||||||||||  |||||| | |||||| |||||||||||||||||||||    
T  52474090 cgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaaccc 52474141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 10748333 - 10748299
Alignment:
Q  342 ctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||||||||||||||||||| |||||||||||    
T  10748333 ctcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 36568947 - 36568905
Alignment:
Q  337 ctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||    
T  36568947 ctcccctccattccactcctaaaccctccatccaaacacaccc 36568905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 381
Target Start/End: Original strand, 40858767 - 40858800
Alignment:
Q  348 tcccctcctaaaccctcaatccaaacacacccat 381  Q
    ||||||||||||||||| ||||||||||||||||    
T  40858767 tcccctcctaaaccctccatccaaacacacccat 40858800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 46205015 - 46204890
Alignment:
Q  256 aatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcc 350  Q
    ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |||| |||||||||||| |||||| | | ||| | || ||||     
T  46205015 aatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacactctcatctcttct 46204916  T
Q  351 cctcctaaaccctcaatccaaacaca 376  Q
    ||| |||||||||| |||||||||||    
T  46204915 cctgctaaaccctcgatccaaacaca 46204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 14897933 - 14897897
Alignment:
Q  342 ctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  14897933 ctcccttcccctcctaaactctcaatccaaaaacacc 14897897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 18654645 - 18654601
Alignment:
Q  335 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||| || ||| ||||||||||||||| ||||||||||||||    
T  18654645 ccctcccatctctttccctcctaaaccctccatccaaacacaccc 18654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 52473984 - 52473920
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacac 375  Q
    |||||||||||||| |||| ||| | ||||| |  |||||||||| |||| ||||||||||||||    
T  52473984 cgtaatttaaaaaagaaaattgaactctcccatttcttcccctcccaaactctcaatccaaacac 52473920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 101; Significance: 7e-50; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 211 - 384
Target Start/End: Original strand, 1467 - 1646
Alignment:
Q  211 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaa------aaagacattttac 304  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||| ||||||||| |||||||| ||||| ||||||||||       ||| |||||||||    
T  1467 gacattatagaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttaaaaaatacttaatttatttaaagaaaaacattttac 1566  T
Q  305 attgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaa 384  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||    
T  1567 attgttcgtaatttaaaaaataaaagtgagccctcccctccattcctctcctaaaccctcaattcaaacacacccttaaa 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 1256 - 1175
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    |||| |||||| || |||||||||||||| |||||| | | |||||||| ||||||||||||||||||||||||||||||||    
T  1256 acatgttacatagtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 196 - 379
Target Start/End: Complemental strand, 37572 - 37384
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 290  Q
    ||||||||| ||| ||||| ||||| |||||||||| |||| | |||||||| |||||| | ||||||| ||| ||||||||||||||| |||||         
T  37572 cttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatgataagtgatcatataacacttcaaaaacacttgatttatttta 37473  T
Q  291 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||| |||||    
T  37472 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccccttccttgccctcctaaatcctcaattcaaacgcaccc 37384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 258 - 379
Target Start/End: Complemental strand, 30843 - 30716
Alignment:
Q  258 tgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttccc 351  Q
    ||||||| ||| |||||||||||||||||||||      |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  30843 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtc 30744  T
Q  352 ctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||| ||||||||||||| |||||    
T  30743 ctcctaaatcctcaatccaaacgcaccc 30716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 146 - 379
Target Start/End: Complemental strand, 53122 - 52897
Alignment:
Q  146 tattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 245  Q
    ||||||||||||||||||   ||||||||||||||  |  |  ||| || ||||||||| |||  | |||||| |||||||||||  ||||||||| |||    
T  53122 tattaagggtgtgtttggatggagggtttaggaggacaatg--tacttttcttttttaaattatgggcattatgaaatgattttttgaaaattgaactaa 53025  T
Q  246 cagcatgatcaatgatcatgtaatacttcaaaaacactta----atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 341  Q
    || |||||| ||||||||| ||||| ||||||||||||||    ||||||||| | ||||||||||||| |||||||||||||||||||||||           
T  53024 caacatgataaatgatcatataatatttcaaaaacacttaatgtatttaaaaaaatattttacattgtttgtaatttaaaaaataaaagtgag------- 52932  T
Q  342 ctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
        |||||| |||||||||||||||||||||||||||    
T  52931 ---tcttcccatcctaaaccctcaatccaaacacaccc 52897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 242425 - 242311
Alignment:
Q  176 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 275  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||| |||||| || ||||| ||||    
T  242425 ggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaaattgaattaacgacatgataaatgatgatataataattca 242326  T
Q  276 aaaacacttaattta 290  Q
    |||| |||| |||||    
T  242325 aaaatacttcattta 242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 242377 - 242456
Alignment:
Q  297 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    ||||||| | ||| |||||||||||||| |||||| | |||||||||||||||||||  |||||| || |||||||||||    
T  242377 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 184796 - 184636
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca-aaaacacttaattt----- 289  Q
    ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||||  || ||||| |||||||||| ||||||||||||||         
T  184796 cttttttaaattatggacattataaaatgatttttttaaaattgaattaacaacatgatatattatcatataatacttcaaaaaacacttaatttattta 184697  T
Q  290 -----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcc 345  Q
         ||||| |||||||| || |||| ||||||||||||||||||||| |||||||||||    
T  184696 aaaaaaaaaaaacattttatatagttcataatttaaaaaataaaagtgaaccctcccctcc 184636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  313 taatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacaca 376  Q
    |||||||||||| || ||| | ||||||| |||||| ||||||||||||||| |||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 39341 - 39442
Alignment:
Q  287 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacccataaagt 386  Q
    |||| ||| |||| |||||| || |||||||||||||| |||||| | |||||||||||||| |||| ||||||||||||||||||||||||| ||| ||    
T  39341 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacacccttaatgt 39440  T
Q  387 tt 388  Q
    ||    
T  39441 tt 39442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 39256 - 39187
Alignment:
Q  311 cgtaatttaaaaaataaaagtgagccctcccc-tcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    |||||||||||||  |||||| | |||||||| ||  |||||||||||||||||| ||||||||||||||    
T  39256 cgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctccatccaaacacaccc 39187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1414 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 325
Target Start/End: Complemental strand, 473 - 355
Alignment:
Q  214 attataaaatgatttttaaaaaattgaa-ttaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat------ttaaaaagacattttacat 306  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||||| ||  |||||||||||||||||||||      | ||||| ||||||||| |    
T  473 attataaaatgatttttagaaaattaaaattaacagcatgataaatgataataaaatacttcaaaaacacttaattatttataaaaaaaacattttacgt 374  T
Q  307 tgttcgtaatttaaaaaat 325  Q
    |||||||||| ||||||||    
T  373 tgttcgtaatataaaaaat 355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 377
Target Start/End: Complemental strand, 3215 - 3150
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacac 377  Q
    ||||||||||||| |||||| | | |||||||||||||||||||||||| ||||||||||||||||    
T  3215 gtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 6652 - 6585
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| | ||||||||||||||| ||||||||| | |||||||||||||||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccc 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 17729 - 17640
Alignment:
Q  196 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta 285  Q
    ||||||||| ||| | | |||||||||||||||||  |||||||||||| || |||||| ||| ||||| |||||||||||| |||||||    
T  17729 cttttttaaattacaaatattataaaatgattttttgaaaattgaattagcaacatgataaataatcatataatacttcaaatacactta 17640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 17716 - 17781
Alignment:
Q  312 gtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||||||||||| |||||| | |||  ||||||||||| ||||||||||||| ||||||||||||||    
T  17716 gtaatttaaaaaagaaaagtaaaccc--ccctcccttccactcctaaaccctccatccaaacacaccc 17781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 16369 - 16297
Alignment:
Q  307 tgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 379  Q
    ||||| |||||||||||  |||||| | ||||||||||| || ||||||||||||||| ||||||||| ||||    
T  16369 tgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaacaaaccc 16297  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 122068 - 121987
Alignment:
Q  296 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaccctcaatccaaacacacc 378  Q
    |||||||| | |||||||||||| ||||| |||||  |  ||||||||| || |  |||||||||||||||||||||||||||    
T  122068 acattttataatgttcgtaattttaaaaagaaaagcaaatcctcccctctct-cttctcctaaaccctcaatccaaacacacc 121987  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 81498 - 81546
Alignment:
Q  228 tttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 276  Q
    |||||||||||||| ||| | |||||| ||||||||| |||||||||||    
T  81498 tttaaaaaattgaaataataacatgataaatgatcatataatacttcaa 81546  T

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