View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6641_low_34 (Length: 439)
Name: NF6641_low_34
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6641_low_34 |
 | |
|
| [»] scaffold0143 (1 HSPs) |
| | |
|
| [»] scaffold0328 (1 HSPs) |
| | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 11085352 - 11085048
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
11085352 |
aatactgaagcaatacgggtcattaatcttgttgggcttcagaacaatctggtgatccatttcacgtacaacagaatcagaaaaggaaactcctaacatg |
11085253 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| ||||| |||| || |||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
11085252 |
taggcacattattaggaacatcctgatcacctccaaactttcttaagtagataacacaatcttaggaaatcacaaaccgatctgatcttgtgctaaaaac |
11085153 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
11085152 |
acgcagcttgaccaacaagaattaaggcgtggattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggttaactgaaccatgccaggat |
11085053 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
11085052 |
gttgg |
11085048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 45599023 - 45598719
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
45599023 |
aatactaaagcaatacgtgtcattaatcttgttgggcttcagaacaattcggtgatccatttcacgtacaacagaatcagaaaaggaagctcctaatata |
45598924 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |||||||||| |||| || |||||||||||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
45598923 |
taggcacactattaggaacatcatgatcacctccaaactttcctaagtagataacacaatcttaggaaatcacaaaccgatatgatcatgtgctaaaaac |
45598824 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
45598823 |
acgcagcttgaccaacaagaataaaggcgtggattccttaaataaaacagcgtgtgcgtaaaacaagacagggtgcaggtcaactgaaccatgccaggat |
45598724 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
45598723 |
gttgg |
45598719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 81 - 421
Target Start/End: Complemental strand, 40312965 - 40312612
Alignment:
| Q |
81 |
tcttcaaatgacggcttgaatacttctctagatctt-------------aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccg |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||| |
|
|
| T |
40312965 |
tcttcaaatgacggcttgaatacttctctaggtcttccagtcttgtttaaatactgaagcaatacgggtcataaatcttgttgggctttagaacaatcct |
40312866 |
T |
|
| Q |
168 |
gtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtgga |
267 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
40312865 |
gtgatccatttcacgtacaacagaaccagaaaagaaaactcctaatatgtaggcacataattaggaacatcctgatcacctccaaactttcctaagtaga |
40312766 |
T |
|
| Q |
268 |
tatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagc |
367 |
Q |
| |
|
|| || ||| |||||||| ||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||| ||||||| | |
|
|
| T |
40312765 |
taacacaattttaggaaatcacaaaccaatctgatcctgtgctaaaaacacacagcttgaccaacaagaataaagacgtggattccttaattaaaataac |
40312666 |
T |
|
| Q |
368 |
gcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttgg |
421 |
Q |
| |
|
| ||| ||||||||||||| |||||||||||||| |||||||| |||||||||| |
|
|
| T |
40312665 |
gtgtgtgtaaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgttgg |
40312612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 33062852 - 33063155
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||||||||||||||||| |||||||| || ||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
33062852 |
aatactgaagcaatacgggtcagtaaacttgttgggcttcagaacaattcggtgatcaatctcacgaacaacataaccagaaaaggaaactcctaatatg |
33062951 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||||| ||| |||||||||| |||| || |||||||||||| ||||||| ||| ||||| |||||||||| |
|
|
| T |
33062952 |
taggcacattatttggaacattctggtcacctctaaactttcctaagtagataacacaatcttaggaaatcacaaac-gatatgatcctgtgctaaaatc |
33063050 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
33063051 |
acgcagcttgaccaacaagaataaaggcgtggatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgccaggat |
33063150 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
33063151 |
gttgg |
33063155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 52436510 - 52436205
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgta--caacagaataagaaaaggaaactcctaat |
213 |
Q |
| |
|
||||||||||||||| |||||| ||| ||| ||||||||||||||||||| ||||||| ||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
52436510 |
aatactgaagcaatacgggtcagtaaactttgttgggcttcagaacaatc-ggtgatctatttcacaaaaacaacagaaccagaaaaggaaactcctaat |
52436412 |
T |
|
| Q |
214 |
atgtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaa |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || |||||||||| |||| || | |||||||||| |||||| ||||||||| |||||||||| |
|
|
| T |
52436411 |
atgtaggcacattattaggaacatcctgatcaccttcgaactttcctaagtagatagcacattcttaggaaatcacaaa-tgatctgataatgtgctaaa |
52436313 |
T |
|
| Q |
314 |
aatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctag |
413 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| || |
|
|
| T |
52436312 |
aacacgcagcttgaccaacaaaaataaagacgttgattccttaaataaaatagtgcgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgcaag |
52436213 |
T |
|
| Q |
414 |
gatgttgg |
421 |
Q |
| |
|
|||||||| |
|
|
| T |
52436212 |
gatgttgg |
52436205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 17012468 - 17012543
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaa |
192 |
Q |
| |
|
||||||||||||||| ||||| ||| |||||| ||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17012468 |
aatactgaagcaataaaggtcagtaaacttgttaggcttgagaacaatccggtgatccatttcacgaacaacagaa |
17012543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 17038896 - 17038965
Alignment:
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggca |
386 |
Q |
| |
|
|||||| |||||||||| ||| ||| |||| |||||||||||||| | ||||||||||||| |||||| |
|
|
| T |
17038896 |
acgcaggttgaccaacactaatgaaggcgtggattccttaaataaacgaacgcgtgcgtaaaataaggca |
17038965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 18606289 - 18605985
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18606289 |
aatattgaagcaatacgggtcattaatcttgttgggcttcagaacaatccggtaatccatttcacgtacaacagaatcagaaaaggaaactcctaatatg |
18606190 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||| ||||||||||||||||| |||||||| || |
|
|
| T |
18606189 |
caggcacattattaggaacatcctgatcacctccaaactttcctaagtggaaaacacaatcttaggaaatcacaaactgatctgatcctgtgctaagaac |
18606090 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||||||| |||||||||||||| | ||| |||| ||||| |
|
|
| T |
18606089 |
acgcagcttgaccaacaagaataaagacgtggattccttaagtaaaatagtgtgtgcgtaaaacaaggtagggtgcaggtcaattgaactatgccaggat |
18605990 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
18605989 |
gttgg |
18605985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 18766145 - 18766448
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| ||| ||| ||||||||||||||||||| |||||||||| ||| | ||||||||| |||||||||||||| |||||| |
|
|
| T |
18766145 |
aatactgaagcaatacgggtcactaaactttgttgggcttcagaacaatc-ggtgatccatatcatgaacaacagaaccagaaaaggaaactcttaatat |
18766243 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||| ||||||| |||| |||| ||||||||||| |
|
|
| T |
18766244 |
gtaggcacattattaggaacatcctgatcacctccaaactttcctaagtagatatcacaaacttaggaaatcacaaac-gatcagatcctgtgctaaaaa |
18766342 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
| ||| ||||| ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||| |
|
|
| T |
18766343 |
catgcaacttgaacaacacgaataaaagcgtggattccttaaataaaatagcgcgtgcgtaaaacaaggtaaggtgcaggtcaactgaaccatggcagga |
18766442 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
18766443 |
tgttgg |
18766448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 13314657 - 13314354
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
|||||||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||| |
|
|
| T |
13314657 |
aatactgaagcaatatgggtcagtacactttgttgggcttcagaacaatc-ggtgatccatttcataaacaacagaaccagaaaaggaaactcttaatat |
13314559 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||| |||| || | |||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
13314558 |
gtaggcaaattattaggaacatcctgatcacctccaaactttcctaagtagatagcacattcttaggaaatcacaaac-gatctgattctgtgctaaaag |
13314460 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
||||| |||||||||||||||||||| |||| |||||| |||||||||| |||||| | ||||||||||| |||||||||||||| |||||| | | || |
|
|
| T |
13314459 |
cacgcaacttgaccaacaagaataaaggcgtggattcctcaaataaaataacgcgtgtgaaaaacaaggcaaggtgcaggtcaactgaaccattccaaga |
13314360 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
13314359 |
tgttgg |
13314354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 145 - 421
Target Start/End: Original strand, 29566508 - 29566782
Alignment:
| Q |
145 |
ttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatc |
244 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
29566508 |
ttgttgggcttcagaacaatcag-tgatccatttcataatcaacagaaccagaaaaggaaactcctaatatgcagacacattattaggaacatcctgatc |
29566606 |
T |
|
| Q |
245 |
acctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagac |
344 |
Q |
| |
|
||||||||| |||||||||| |||| || | |||||| ||| ||||||| || ||||| |||||||||| ||||| |||||||||||||||||||| | |
|
|
| T |
29566607 |
acctccaaactttcctaagtagatagcacattcttagaaaatcacaaac-gaactgattttgtgctaaaagcacgcaacttgaccaacaagaataaaggc |
29566705 |
T |
|
| Q |
345 |
gtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttgg |
421 |
Q |
| |
|
||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||| |||||||| |||||||||| |
|
|
| T |
29566706 |
gtggattccttaaataaaataacgcgtgcgaaaaacaaggcaatgtgcaggtcaactgaaccatgccaggatgttgg |
29566782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 213; Significance: 1e-116; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 19894506 - 19894202
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |
|
|
| T |
19894506 |
aatactgaagcaataagggtcagtaaacttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaatcagaaaagaaaacttctaatatg |
19894407 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||| ||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
19894406 |
tagacacattattaggaacatcctgatcacctccaaactttcctaagtagataacacaatcttagaaaatcacaaaccgatatgatcctgtgctaaaaac |
19894307 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
19894306 |
acgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagcgcgtgtgtaaaacaaggcagggtgcaggtcaactgaatcatgccaggat |
19894207 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
19894206 |
gttgg |
19894202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 117 - 407
Target Start/End: Original strand, 22555439 - 22555729
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
22555439 |
aatactgaaacaatacgggttattaatcttgttgggcttcagaagaatccggtgatccatttcacgatcaacagaatcagaaaaggaaactcctaatatg |
22555538 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||||||| |||| || |||||||| ||| |||| || ||||||||| ||||||||||| |
|
|
| T |
22555539 |
taggcacattattagaaacatcctgatcacctccaaactttcctaagtagataacacaatcttagaaaatcacacaccgatctgatcctgtgctaaaaac |
22555638 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaacca |
407 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22555639 |
acgcagcttgaccatcaagaataaaggcgtgaattccttaaataaaattgcgcatgcgtaaaacaaggcagggtgcaggtcaactgaacca |
22555729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 117 - 420
Target Start/End: Original strand, 23541709 - 23542011
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |
|
|
| T |
23541709 |
aatactgaagcaatacagatcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacataaccagaaaaggaaactcctaataag |
23541808 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
23541809 |
tatgcacattattaggaacatcctgatcacctccaaactttcctaagcagataacacaatcttaggaaatcacaaac-gatctgatcttgtgctaaaaat |
23541907 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||| || |||||||| | |||||||| | ||| |
|
|
| T |
23541908 |
acgcagcttgaccgacaagaataaaggcgtggattccttaaataaaataacgcgtgcgaaaaacaaggcaaagtacaggtcaattgaaccatgccatgat |
23542007 |
T |
|
| Q |
417 |
gttg |
420 |
Q |
| |
|
|||| |
|
|
| T |
23542008 |
gttg |
23542011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 24143600 - 24143903
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
|||| ||||| |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24143600 |
aatattgaagtaatacgggtcagtaaacttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaaccagaaaaggaaactcctaatatg |
24143699 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||| |||||||||| |||| || |||||||||||| ||||||| || ||||| | ||||||||| |
|
|
| T |
24143700 |
taggcacataattcggaacatcctgatcacctccaaactttcctaagtagataacataatcttaggaaatcacaaac-aatttgatcctatgctaaaaac |
24143798 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| |||| ||||||||| |||||||| ||||| |
|
|
| T |
24143799 |
atgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagcgcgtgcgaaaaactaggcaaggtgtaggtcaactgaaccatgccaggat |
24143898 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
24143899 |
gttgg |
24143903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 46738958 - 46738651
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
46738958 |
aatactgaagcaatacgggtcagtaaaacttgttgggcttctgaacaatccggtgatccatttcacgatcaacagaatcagaaaaggaaactcctaatat |
46738859 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgcta--aa |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||| ||| |||||| ||||||||| ||||||| || |
|
|
| T |
46738858 |
gtaggcacattattaggaacatcctgatcacctccaaactttcctaagtagataacacaatcttagaaaatcacaaaacgatctgatcctgtgctaaaaa |
46738759 |
T |
|
| Q |
314 |
aatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctag |
413 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| | ||| |||||||||||| ||||||| || |
|
|
| T |
46738758 |
aacacgcagtttgaccaacaagaataaagacgtgaattccttaaataaaaaagcgtgtgcgtaaaacaaagtaggatgcaggtcaactgaaccatgtcag |
46738659 |
T |
|
| Q |
414 |
gatgttgg |
421 |
Q |
| |
|
|||||||| |
|
|
| T |
46738658 |
gatgttgg |
46738651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 118 - 421
Target Start/End: Complemental strand, 15687392 - 15687088
Alignment:
| Q |
118 |
atactgaagcaatatgggtcatta-atcttgttgggcttcagaacaatccggtgatccatttcacgtacaa-cagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||||||||| | | |||||||||||||||||||| |||||||| ||||| | | || ||||| ||| ||||||| ||||||||| |
|
|
| T |
15687392 |
atactgaagcaatatgggtcagaacaacttgttgggcttcagaacaaaacggtgatctgtttca-gaataatcagaaccagataaggaaagtcctaatat |
15687294 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| |||| || || ||||| || |||| |||||||| ||| |||||| |
|
|
| T |
15687293 |
gtaggcacattattaggaacatcctgatcacctccaaactttcctaagtagatagcactccctcgggaaatcataaac-gatctgattctgtactaaaag |
15687195 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtca-actaaaccatgctagg |
414 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| |||||||||||||| | | |||||||||||||||||| ||| |||| || || |||||||| ||| |
|
|
| T |
15687194 |
cacgcagcttgaccaacaagaattaaggcgtggattccttaaataaacaaacacgtgcgtaaaacaaggcaaggtacagggcataccgaaccatgccagg |
15687095 |
T |
|
| Q |
415 |
atgttgg |
421 |
Q |
| |
|
||||||| |
|
|
| T |
15687094 |
atgttgg |
15687088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 207 - 421
Target Start/End: Original strand, 11905646 - 11905859
Alignment:
| Q |
207 |
tcctaatatgtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatg |
306 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| || || | |||| ||||||| |||||||| || |
|
|
| T |
11905646 |
tcctaatatgtagacacattattaggaacatcctgatcacctccaaactttcctaagtagatagcactccctcatgaaatcacaaac-gatctgattctg |
11905744 |
T |
|
| Q |
307 |
tgctaaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaacc |
406 |
Q |
| |
|
| |||||| |||||||||||||||||||||| ||| |||| |||||||||||||| | |||||| ||||||||||||| ||| | |||||||| |||| |
|
|
| T |
11905745 |
tactaaaagcacgcagcttgaccaacaagaattaaggcgtggattccttaaataaataaacgcgtgtgtaaaacaaggcaaggtaccggtcaactgaacc |
11905844 |
T |
|
| Q |
407 |
atgctaggatgttgg |
421 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
11905845 |
atgccaggatgttgg |
11905859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 311 - 421
Target Start/End: Complemental strand, 11324767 - 11324657
Alignment:
| Q |
311 |
aaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgc |
410 |
Q |
| |
|
||||| ||||||||| |||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11324767 |
aaaaagacgcagctttaccatcaagaataaaggcgtggattggttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgc |
11324668 |
T |
|
| Q |
411 |
taggatgttgg |
421 |
Q |
| |
|
| |||||||| |
|
|
| T |
11324667 |
caagatgttgg |
11324657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 11324837 - 11324776
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccattt |
178 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11324837 |
aatactgaagcaatacgggtcattaatcttgttgggcttcagaacaattcggtgatccattt |
11324776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 14975897 - 14976202
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
|||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |
|
|
| T |
14975897 |
aatattgaagcaatacgggtcagtaaaacttgttgggcttcagaacaatccggtgatccatttcaagatcaacagaatcagaaaaggaaactcctaatat |
14975996 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||||| | || || |||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
14975997 |
gtaggcacattattaggaacatcctgatcacctccacactttcctaagtagctaacacaatcttaggaaaacacaaaccgatctgatcctgtgctaaaaa |
14976096 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
14976097 |
cacgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaagtcaactaaaccatgccagga |
14976196 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
| |||| |
|
|
| T |
14976197 |
tattgg |
14976202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 15405373 - 15405678
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
|||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |
|
|
| T |
15405373 |
aatattgaagcaatacgggtcagtaaaacttgttgggcttcagaacaatccggtgatccatttcaagatcaacagaatcagaaaaggaaactcctaatat |
15405472 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||||| | || || |||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
15405473 |
gtaggcacattattaggaacatcctgatcacctccacactttcctaagtagctaacacaatcttaggaaaacacaaaccgatctgatcctgtgctaaaaa |
15405572 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
15405573 |
cacgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaagtcaactaaaccatgccagga |
15405672 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
| |||| |
|
|
| T |
15405673 |
tattgg |
15405678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 3285994 - 3285690
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||| |
|
|
| T |
3285994 |
aatactgaaacaatacaagtcagtaaacttgttgggcttcagaacaatccggtgatccatttcacgatcaacagaatcagataaggaaactgctaatatg |
3285895 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| |||||||||| |||| || |||||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
3285894 |
taggcacattattaggaacatcctgatcacttccaaactttcctaagtagataacacaatcttagaaaatcacaaaccgatctgatcatgtgctaaaaac |
3285795 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
3285794 |
acgcagcttgaccaacaagaataaatacgtggattccttaaataaaatagcacgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggat |
3285695 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
3285694 |
gttgg |
3285690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 48797311 - 48797008
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||| |
|
|
| T |
48797311 |
aatactgaagcaatacgggtcagtaaacttgttggacttcagaacaatccggtgatccatttcacgtacaatagaaccagaaaaagaaactcctaatatg |
48797212 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| ||||||||| |||| | | |||||||||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
48797211 |
taggcacattattaggaaaatcctgatcacctccaaactttcctaagcagatagctcattcttaggaaatcacaaac-gatttgatcctgtgctaaaaac |
48797113 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
48797112 |
atgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggat |
48797013 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
48797012 |
gttgg |
48797008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 117 - 419
Target Start/End: Original strand, 11629105 - 11629407
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
11629105 |
aatactgaagcaatacgggtcagtaaacttgttgggctttagaacaatccggtgatccatttcacgaacaacagaaccagaaaaggaaactcctaatatg |
11629204 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaa-tttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||||| |||| || |||||||||||| ||||||| ||||||||| ||| ||||||| |
|
|
| T |
11629205 |
taggcacattattaggaacatcctgatcaactccaaaactttcctaagtagataacacaatcttaggaaatcacaaac-gatctgatcctgtcctaaaaa |
11629303 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||| ||||||| |||| ||||||||||||||||| |||||||||||||| |||||||| |||| |
|
|
| T |
11629304 |
cacgcagcttgaccaacaagaataaaagcgtggattcctttaataaaaaagcgtgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgccagga |
11629403 |
T |
|
| Q |
416 |
tgtt |
419 |
Q |
| |
|
|||| |
|
|
| T |
11629404 |
tgtt |
11629407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 117 - 420
Target Start/End: Original strand, 7620547 - 7620850
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||| |
|
|
| T |
7620547 |
aatactaaagcaatacgagtcattaatcttgttgggcttcagaacaatcctgtgatccatttcacgtacaacaaaatcataaaaggaaactcctaatatg |
7620646 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| || |||||||||| |||| || |||||||||||| ||||||| |||| |||| ||||||||||| |
|
|
| T |
7620647 |
taggtacattattaggaacatcctgatcacctcctaactttcctaagtagataacacaatcttaggaaatcacaaaccgatccgatcctgtgctaaaaac |
7620746 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||| ||||| |
|
|
| T |
7620747 |
acgcagtttgaccaacaagaataaaagcgttgataccttaaataaaatagcgcgtgcgtaaaacaaggcaggatgcatgtcaaccgaaccttgccaggat |
7620846 |
T |
|
| Q |
417 |
gttg |
420 |
Q |
| |
|
|||| |
|
|
| T |
7620847 |
gttg |
7620850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 118 - 421
Target Start/End: Complemental strand, 12560904 - 12560603
Alignment:
| Q |
118 |
atactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatgt |
217 |
Q |
| |
|
||||||||| |||| |||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12560904 |
atactgaagtaatacgggtcagtaaacttgttgggcttcagaacaatctggtgatccgtttcacgtacaacagaaccagaaaaggaaactcctaatatgt |
12560805 |
T |
|
| Q |
218 |
aggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaata |
317 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||||||||| |||| | |||||||||| ||||||| ||||||||| ||||||||||| | |
|
|
| T |
12560804 |
aggcacattattaggaacatccttatcacctcctaactttcctaagtagata-gttattcttaggaaatcacaaac-gatctgatcctgtgctaaaaaca |
12560707 |
T |
|
| Q |
318 |
cgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatg |
417 |
Q |
| |
|
|||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| |
|
|
| T |
12560706 |
agcagcttgactaacaagaataaaggtgtggattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtggaggtcaactgaaccatgccaggatg |
12560607 |
T |
|
| Q |
418 |
ttgg |
421 |
Q |
| |
|
|||| |
|
|
| T |
12560606 |
ttgg |
12560603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 30226535 - 30226838
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
|||||||| |||||| ||||| || ||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| | | |
|
|
| T |
30226535 |
aatactgaggcaatacaggtcagtagacttgttgagcttcagaacaattcggtgatccatttcacaaacaacagaaccagaaaaggaaactcctataaag |
30226634 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||| ||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
30226635 |
taggcacattattaggaacatcctgatcacctccaaactttcctaagtagataacacaatcttagtaaatcacaaac-gatttgatcctgtgctaaaaac |
30226733 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
30226734 |
acgcagcttgaccaacaagaataaaggcgtggattccttaaatataatagcgcatgcgtaaaacaaggcagggtgcaggtcaactgaatcatgccaggat |
30226833 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
30226834 |
gttgg |
30226838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 117 - 269
Target Start/End: Original strand, 14985135 - 14985288
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||| ||||||| |
|
|
| T |
14985135 |
aatactgaagcaatacgggtcagtaaaacttgttgggcttcagaacaatccggtgatccatttcacgatcaacataatcagaaaagaaaacttctaatat |
14985234 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggata |
269 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
14985235 |
gtaggcacattattaggaacatcctaatcacctccaagctttcctaagtagata |
14985288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 117 - 269
Target Start/End: Original strand, 15414746 - 15414899
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||| ||||||| |
|
|
| T |
15414746 |
aatactgaagcaatacgggtcagtaaaacttgttgggcttcagaacaatccggtgatccatttcacgatcaacataatcagaaaagaaaacttctaatat |
15414845 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggata |
269 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
15414846 |
gtaggcacattattaggaacatcctaatcacctccaagctttcctaagtagata |
15414899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 199 - 410
Target Start/End: Original strand, 24049999 - 24050209
Alignment:
| Q |
199 |
aaggaaactcctaatatgtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatc |
298 |
Q |
| |
|
||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| |||| || ||||||||| ||||||| |||| |
|
|
| T |
24049999 |
aaggaaagtcctaatatgtaggcagattatttggaacatcctgatcagctccaaactttcctaagtagatagcactcccttaggaaatcacaaac-gatc |
24050097 |
T |
|
| Q |
299 |
tgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtca |
398 |
Q |
| |
|
|||| ||| |||||| | |||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||| |||||| ||||| ||| ||||||| |
|
|
| T |
24050098 |
tgattctgtactaaaagcatgcagcttgaccaacaataattaaggcgtgaattccttaaataaataaacgcgtgcataaaaccaggcaaggtacaggtca |
24050197 |
T |
|
| Q |
399 |
actaaaccatgc |
410 |
Q |
| |
|
||| |||||||| |
|
|
| T |
24050198 |
actgaaccatgc |
24050209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 148 - 421
Target Start/End: Complemental strand, 11560163 - 11559892
Alignment:
| Q |
148 |
ttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatcacc |
247 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||| | | || || ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11560163 |
ttgggcttcagaacaaac-ggtgatccgtttcacatcgatcataaccagataaggaaagtccaaatatgtaggcacattattaggaacatccttatcacc |
11560065 |
T |
|
| Q |
248 |
tccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagacgtg |
347 |
Q |
| |
|
| |||| ||||| |||| |||| || |||||| ||||||| |||||||| ||| |||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
11560064 |
ttcaaactttccgaagtcgatagcactccaacaggaaatcacaaac-gatctgattttgtactaaaagcacgcagcttgaccaacaagaataaaggcgtg |
11559966 |
T |
|
| Q |
348 |
aattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttgg |
421 |
Q |
| |
|
|||||||||||||| | |||||||| ||||||||||| | | |||||||||||||||||| ||||| |||| |
|
|
| T |
11559965 |
gattccttaaataaataaacgcgtgcgaaaaacaaggcaagctataggtcaactaaaccatgccaggatattgg |
11559892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 23082456 - 23082412
Alignment:
| Q |
118 |
atactgaagcaatatggg-tcattaatcttgttgggcttcagaac |
161 |
Q |
| |
|
|||||||||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
23082456 |
atactgaagcaatatgggcttattaaccttgttgggcttcagaac |
23082412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 20497844 - 20497540
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
20497844 |
aataccgaagcaatacgggtcattaatcttgttgggcttcataacaatccggtgatccatttcacgttcaacagaatcagaaaaggaaactcctaatatg |
20497745 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|| ||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||||||||| ||||||| | ||||| |||| |||||||| |
|
|
| T |
20497744 |
tatgcacattattaggaacatcttgatcacctccaaactttcctaagtagataacacaatcttaggaaatcacaaaccggtctgaacatgagctaaaaac |
20497645 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | | ||| |
|
|
| T |
20497644 |
acgcagcttgaccatcaagaataaaggcgtggattccttaaataaaatagcgagtgcgtaaaacaaggcagggtgcaggtcaactgaaccataccaagat |
20497545 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
20497544 |
gttgg |
20497540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 26182926 - 26182623
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26182926 |
aatactgaagcaatacgggtcagtaaacttgttgc-cttcagaaaaatttggtgatccatttcacgtacaacagaatcagaaaaggaaactcctaatatg |
26182828 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||| |||||||||||| || ||||||||||||| |||||||||| |||| || |||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
26182827 |
taggcacgttattaggaacaacccgatcacctccaaactttcctaagtagataacacaatcttaggaaatcacaaactgatctgatcctgtgctaaaaac |
26182728 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
26182727 |
acgcagcttgaccaacaagaataaagacgtggattccttaaataaaatggtgcatgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggat |
26182628 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
26182627 |
gttgg |
26182623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 145 - 421
Target Start/End: Original strand, 20287057 - 20287331
Alignment:
| Q |
145 |
ttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatc |
244 |
Q |
| |
|
|||||| ||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20287057 |
ttgttgtgctccagaacaatc-ggtgatccatttcacaaacaacagaaccagaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatc |
20287155 |
T |
|
| Q |
245 |
acctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagac |
344 |
Q |
| |
|
||||||||| |||||||||| |||| || | |||||||||| | ||||| |||| | || ||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
20287156 |
acctccaaactttcctaagtagataacacattcttaggaaatcccaaac-gatccggtcttgtgctaaaaacacgtagcttgaccaacaagaataaagac |
20287254 |
T |
|
| Q |
345 |
gtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttgg |
421 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||| |
|
|
| T |
20287255 |
gtggattccttaaataaaatagcgcgtgcgaaaaacaaggcagggtggaggtcaactgaaccatgccaggatgttgg |
20287331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 117 - 420
Target Start/End: Complemental strand, 7897607 - 7897306
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||||||| |
|
|
| T |
7897607 |
aatactgaagcaatacgggtcagtaaacttgttgggcttcagaacaatccggtgatccaaatcacgtaccacagaaccaaaaaaggaaactcctaatatg |
7897508 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||| |||||| || || ||||||||||| ||||||| ||||||||| | ||||||| | |
|
|
| T |
7897507 |
taggcacactattaggaacatcctgatcacctccaaacttttctaagtaaatcacacgatcttaggaaatcacaaac-gatctgatcctatgctaaagac |
7897409 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||| || ||||| ||||| |
|
|
| T |
7897408 |
acgcagcttgaccaacaagaataaatacgtggattccttaaataaaatagcgcgtgcgtaaaactaggtaaggtgcaggtcaactgaa-catgccaggat |
7897310 |
T |
|
| Q |
417 |
gttg |
420 |
Q |
| |
|
|||| |
|
|
| T |
7897309 |
gttg |
7897306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 17920478 - 17920177
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||| | | |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17920478 |
aatactgaagcaatacgggttagaagacttgttgggcttcagaacaatccgatgatccaaatcacgtacaacagaaccagaaaaggaaactcctaatatg |
17920379 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||||||| ||||||||| || || ||||||||||| |||||||| || |||||||||||| |||| |
|
|
| T |
17920378 |
taggcacactattagaaacatcatgatcacctccaaactttcctaagaaaatcacacgatcttaggaaatcacaaact-atttgatcatgtgct-aaaac |
17920281 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
17920280 |
acgcagcttgaccaacaacaataaaggcgtggattccttaaataaaatagcgcgtgctaaaaacaaggca-ggtgcaggtcaactgaaccatgccaggat |
17920182 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
17920181 |
gttgg |
17920177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 282 - 421
Target Start/End: Complemental strand, 34404961 - 34404822
Alignment:
| Q |
282 |
gaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaaca |
381 |
Q |
| |
|
|||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
34404961 |
gaaatcacaaatcgatctgatcctgtgctaaaaacacgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagcgcgtgcgtaaaaca |
34404862 |
T |
|
| Q |
382 |
aggcagggtgcaggtcaactaaaccatgctaggatgttgg |
421 |
Q |
| |
|
||| |||||||||||||||| |||||||| |||||||||| |
|
|
| T |
34404861 |
aggaagggtgcaggtcaactgaaccatgccaggatgttgg |
34404822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 17920524 - 17920492
Alignment:
| Q |
84 |
tcaaatgacggcttgaatacttctctagatctt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
17920524 |
tcaaatgacggcttgaatacttctctaggtctt |
17920492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 9037171 - 9037475
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
9037171 |
aatactgaagcaatacgggtcagtaaacttgttgggctttagaacaatccgatgatccatttcacgatcaacagaattgaaaaaggaaactcctaatatg |
9037270 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| |||||||||| |||| || |||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
9037271 |
taggcacattattaggaacatcctgatcacctcaaaactttcctaagtagataacacaatcttaggaaatcacaaaccgatctgatcttgtgctaaaaac |
9037370 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||||||| ||||| |
|
|
| T |
9037371 |
acgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagtgcgtgcgtaaaacaaggcaaggtgcacgtcaactgaaccatgccaggat |
9037470 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
9037471 |
gttgg |
9037475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 117 - 420
Target Start/End: Complemental strand, 9031114 - 9030811
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| | |||| ||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |
|
|
| T |
9031114 |
aatactgaagcaatacgagtcagtaaacttgttgtgcttcagaacaatccggtgatccatttcacgatcaacagaatcaaaaaaggaaactcctaatatg |
9031015 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9031014 |
taggcacattattaggaacatcgtgatcacctccaaactttcctaagtagataacacaatcttaggaaatcacaaactgatctgatcatgtgctaaaaac |
9030915 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||||| |||||| || ||| |||||| |||||| |||||||| ||||| |
|
|
| T |
9030914 |
acgcagcttgaccaacatgaataaagatgtggattctttaaataaaatagcgcgtgcataaaacgagacagtgtgcagatcaactgaaccatgccaggat |
9030815 |
T |
|
| Q |
417 |
gttg |
420 |
Q |
| |
|
|||| |
|
|
| T |
9030814 |
gttg |
9030811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 8749504 - 8749809
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaata-agaaaaggaaactcctaatat |
215 |
Q |
| |
|
|||| |||| ||||| |||| | ||| ||||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||| |
|
|
| T |
8749504 |
aatattgaaacaatacgggttagtaaacttgttgggcttcagaacaattcggtgatccatttcacgtacatcaaaaaccagaaaaggaaactcctaatat |
8749603 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||| |||| || |||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
8749604 |
gtaggcacattattaggaacatcctgatcacttccaaactttcctaagtagataacacaatcttaggaaatcacaaacagatctgatcatgtgctaaaaa |
8749703 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||| |||||| ||||||| |||||||| |||| |
|
|
| T |
8749704 |
cacgcagcttgaccaacaagaataaaggcgtggattccttaaataaaatagagcatgcgtaaaacaaggcaaggtgcaagtcaactgaaccatgccagga |
8749803 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
8749804 |
tgttgg |
8749809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 7495617 - 7495571
Alignment:
| Q |
118 |
atactgaagcaatatgggtcattaa-tcttgttgggcttcagaacaa |
163 |
Q |
| |
|
||||||||||||||||||| || || ||||||||||||||||||||| |
|
|
| T |
7495617 |
atactgaagcaatatgggttataaaatcttgttgggcttcagaacaa |
7495571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 37155217 - 37154913
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
|||| |||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||||| |||||| |
|
|
| T |
37155217 |
aatattgaagcaatacgggtcagtaaaacttgttgggcttcagaacaattcggtgatccatttcacgatcaacataatcagaaaaggaaactcataatat |
37155118 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||| |||||||||| |||| || |||||||||||| ||||||| ||||| ||| ||| ||||||| |
|
|
| T |
37155117 |
gtaggcacgttattaggaacatcctgatcacctctaaattttcctaagtagataacacaatcttaggaaatcacaaaccgatctaatcctgtactaaaaa |
37155018 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |
|
|
| T |
37155017 |
cacgcagcttgaccaacaagaataaagacgtgaattccttaaa-aaaatagcgcgtgcgtaaaacaacgcagggtgcaggtcaactgaaccatgccagga |
37154919 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
37154918 |
tgttgg |
37154913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 117 - 420
Target Start/End: Original strand, 17280354 - 17280656
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| | |||| ||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
17280354 |
aatactgaagcaatacgagtcagtaaacttgttgggctacagaacaatccagtgatccatttcaggtacaacagaaccagaaaaggaaactcctaatatg |
17280453 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||| ||||| ||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
17280454 |
tagacacataattaggaacatcctgatcacctccaaactttcctaagtagataacacaatcttaggaaatcacaaac-gatctgatcctgtgctaaaaac |
17280552 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||||| | ||| |
|
|
| T |
17280553 |
acgcagcttggccaacaagaataaaggggtggattccttaaataaaatagcgcgtgcgaaaaacaaggcaaggtacaagtcaactgaaccatgccatgat |
17280652 |
T |
|
| Q |
417 |
gttg |
420 |
Q |
| |
|
|||| |
|
|
| T |
17280653 |
gttg |
17280656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 195 - 420
Target Start/End: Original strand, 8730474 - 8730699
Alignment:
| Q |
195 |
agaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaact |
294 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
8730474 |
agaaaaggaaattcctaatatgtaggcacataattaggaacatcctgatcacctccaaactttcctaagtagataacaaaatcttaggaaatcacaaacc |
8730573 |
T |
|
| Q |
295 |
gatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcag |
394 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8730574 |
aatctgatcctgtgctaaaaacacgcagcttgaccaacaagaataaagacatggattgcttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcag |
8730673 |
T |
|
| Q |
395 |
gtcaactaaaccatgctaggatgttg |
420 |
Q |
| |
|
||||||| |||||||| ||||||||| |
|
|
| T |
8730674 |
gtcaactgaaccatgccaggatgttg |
8730699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 17880430 - 17880127
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||| ||||||| ||||||||||||||||| | | ||||| || |||||||||||||||||| |
|
|
| T |
17880430 |
aatactgaagcaatacgggtcagtaaaattgttgggcttcggaacaattcggtgatccatttcacgaaaagcagaaccagtaaaggaaactcctaatatt |
17880331 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||| |||| | | |||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
17880330 |
taggcacattattaggaacatattgatcacctccaaactttcctaagtagatagctcattcttaggaaatcacaaac-gatctgatcctgtgctaaaaac |
17880232 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||| ||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| | ||| |
|
|
| T |
17880231 |
acgcaacttgaccaacaagaataaaaatgtggattccttagataaaatagcgcgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgccaagat |
17880132 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
17880131 |
gttgg |
17880127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 33465852 - 33465549
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| || ||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
33465852 |
aatactgaagcaatacgggtcagtacactttgttgggcttcagaacaatc-ggtgatccatttcataaacaacagaaccagaaaaggaaactcctaatat |
33465754 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||||| |||| || | |||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
33465753 |
gtaggcacattattaggaacatcctgatcacctccaaactttactaagtagataacacattcttaggaaatcacaaac-gatctgattttgtgctaaaag |
33465655 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|| ||||||||||||||||||||||| | || ||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||| |||| |
|
|
| T |
33465654 |
cacacagcttgaccaacaagaataaaggcatggattccttaaataaaataatgcgtgcgaaaaacaaggcaaggtgcaggtcaactgaaccatgccagga |
33465555 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
33465554 |
tgttgg |
33465549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 143 - 421
Target Start/End: Original strand, 22876507 - 22876787
Alignment:
| Q |
143 |
tcttgttgggcttcagaacaatccggtgatccatttcacgta-caacagaataagaaaaggaaactcctaatatgtaggcacattattaggaacatcctg |
241 |
Q |
| |
|
||||||||||||||||||||||| | ||||| |||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22876507 |
tcttgttgggcttcagaacaatcag-tgatctatttcataaaacaacagaaccagaaaaggaaactcctgatatgtaggcacattattaggaacatcctg |
22876605 |
T |
|
| Q |
242 |
atcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaa |
341 |
Q |
| |
|
|||||||||||| |||||||||| |||| || | |||||||||| ||||||| |||||||| ||| |||||| |||||||||||||| |||||||||| |
|
|
| T |
22876606 |
atcacctccaaactttcctaagtagatagcacattcttaggaaatcacaaac-gatctgattctgtactaaaagcacgcagcttgacca-caagaataaa |
22876703 |
T |
|
| Q |
342 |
gacgtgaattccttaaataaa----atagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttgg |
421 |
Q |
| |
|
|||||| |||||||||||||| | | | |||||| ||||||||||| ||||||| |||||| |||||||| |||||||||| |
|
|
| T |
22876704 |
gacgtggattccttaaataaataaaaaaacacgtgcgaaaaacaaggcaaggtgcagatcaactgaaccatgccaggatgttgg |
22876787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 18676360 - 18676559
Alignment:
| Q |
221 |
cacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgc |
320 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||| || | || |||||||||||| ||||||| ||| ||||| ||||||||| | |||| |
|
|
| T |
18676360 |
cacattattaggaacattctgatcacctccaaacattcctaagtagacaacacaatcttaggaaatcacaaaccgatatgatcttgtgctaaatacacgc |
18676459 |
T |
|
| Q |
321 |
agcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttg |
420 |
Q |
| |
|
|||||||||||||||||| ||| | || ||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||||||||| |
|
|
| T |
18676460 |
agcttgaccaacaagaattaaggcatggattccttaaataaaatagcacgtgcgtaaaacaaggcagggt-caggtcaactgaaccatgccaggatgttg |
18676558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 117 - 269
Target Start/End: Original strand, 39081430 - 39081583
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaat-cttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
39081430 |
aatactgaagcaataggggttagtaaaacttgttgggcttcagaacaatccggcgatccatttcacaatcaacagaatcagaaaaggaaactcctgatat |
39081529 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggata |
269 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||| |||||| |||| |
|
|
| T |
39081530 |
gtaggcacattactaggaacatcctgatcacctccaaacttttctaagtagata |
39081583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 331 - 420
Target Start/End: Original strand, 39081586 - 39081675
Alignment:
| Q |
331 |
acaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttg |
420 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39081586 |
acaagaataaaggcgtggattccttaaataaaatagcgcatgcgtaaaacaaggcagggtgcaggtcaactaaaccatgtcaggatgttg |
39081675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33138169 - 33138234
Alignment:
| Q |
9 |
tgagatgaattaggtataaaggaaattttactcttaacatattatttaccattataagcaacataa |
74 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33138169 |
tgaggtgaattaggtataaaggaaattttactcttaacatattatttaccattataagcaacataa |
33138234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 8727260 - 8727379
Alignment:
| Q |
81 |
tcttcaaatgacggcttgaatacttctctagatctt-------------aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccg |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
8727260 |
tcttcaaatgacggcttgaatacttctctaggtcttccaatcttgtttaaatactgaagcaatacgggtcagtaaacttgttgggcttcagaacaatccg |
8727359 |
T |
|
| Q |
168 |
gtgatccatttcacgtacaa |
187 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
8727360 |
gtgatccatttcacgtacaa |
8727379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 33143790 - 33143850
Alignment:
| Q |
14 |
tgaattaggtataaaggaaattttactcttaacatattatttaccattataagcaacataa |
74 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33143790 |
tgaattgggtataaatgaaattttactcttaacatattatttaccattataagcaacataa |
33143850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 19216420 - 19216724
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19216420 |
aatactgaagcaatacgggtcagaagacttgttgggcttcagaacaatccgatgatccaaatcacgtacaacagaaccagaaaaggaaactcctaatatg |
19216519 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||| |||||| |||| || |||||||| ||| ||||||| ||||| ||| ||||||||||| |
|
|
| T |
19216520 |
taggcacactattaggaacatcctgatcacctccaaacttttctaagtagataacacaatcttagaaaatcacaaaccgatctcatcctgtgctaaaaac |
19216619 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
19216620 |
acgcagcttgaccaacaagaataaaggcgtgggttccttaaataaaatagcgcgtgcgtaaaataaggcagggtgcaggtcaacttaaccatgccaggat |
19216719 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
|||| |
|
|
| T |
19216720 |
attgg |
19216724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 16137273 - 16136969
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatcttgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatatg |
216 |
Q |
| |
|
||||||||||||||| |||| | ||| ||||||||||||||||| |||||||||||| ||||| | ||||||||| |||||||||||||||||||||| |
|
|
| T |
16137273 |
aatactgaagcaatacgggttagtaaacttgttgggcttcagaataatccggtgatctatttcgcaatcaacagaatcagaaaaggaaactcctaatatg |
16137174 |
T |
|
| Q |
217 |
taggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaat |
316 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |||||||||| |||| || |||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
16137173 |
taggcacattattaggaacatcctaatcaccttcaaactttcctaagtagataacacaatcttaggaaatcacaaaccgatctgatcttgtgctaaaaac |
16137074 |
T |
|
| Q |
317 |
acgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggat |
416 |
Q |
| |
|
||||| |||||||||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||| ||||| |
|
|
| T |
16137073 |
acgcaacttgaccaacaagaataaaggcgtgcattccttaaataaaatagtgcgtctgtaaaacaaggcagagtgcaggtcaactgaaccatgacaggat |
16136974 |
T |
|
| Q |
417 |
gttgg |
421 |
Q |
| |
|
||||| |
|
|
| T |
16136973 |
gttgg |
16136969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 171 - 420
Target Start/End: Original strand, 20003603 - 20003852
Alignment:
| Q |
171 |
atccatttcacgtacaacagaataagaaaaggaaactcctaatatgtaggcacattattaggaacatcctgatcacctccaaaa-tttcctaagtggata |
269 |
Q |
| |
|
|||||||||||| |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
20003603 |
atccatttcacgaacaacacaaccagaaaaggaaactcctaatatgtaggaacattattaggaacatcctgatcacctccaaaactttcctaagtagata |
20003702 |
T |
|
| Q |
270 |
tcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaatacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgc |
369 |
Q |
| |
|
|| |||||||||||| ||||||| ||||||||| ||| ||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
20003703 |
acacaatcttaggaaatcacaaac-gatctgatcctgtcctaaaaacacgcaacttgaccaacaagaataaaagtgtggattccttaaataaaaaagcgc |
20003801 |
T |
|
| Q |
370 |
gtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgttg |
420 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
20003802 |
atgcgtaaaacaaggcaaggtgcaagtcaactaaaccatgctaggatgttg |
20003852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 9385081 - 9385384
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| ||| ||| ||||||||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
9385081 |
aatactgaagcaatacgggtcagtaaactttgttgggctttagaacaaac-ggtgatccatttcacaaacaacagaaccagaaaaggaaactcctaatat |
9385179 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||| |||||||||| |||| || | |||||||||| ||| ||| ||| ||||| ||||||| ||| |
|
|
| T |
9385180 |
gtagggacattattaggaacatcctgatcacgtccaaactttcctaagtagatagcacattcttaggaaatcac-aaccgatatgatcctgtgctataaa |
9385278 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
||| |||||||||||||||||||||| |||| |||||||||||||| ||| || |||| ||||||||||| ||| |||||||||| |||||||| ||| |
|
|
| T |
9385279 |
cacgtagcttgaccaacaagaataaaggcgtggattccttaaataaactagtgcatgcgaaaaacaaggcaaggtccaggtcaactgaaccatgcaggga |
9385378 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
9385379 |
tgttgg |
9385384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 32452454 - 32452757
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatct-tgttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| || | ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||| |
|
|
| T |
32452454 |
aatactgaagcaatacgggtcagtacaatatgttgggcttcagaacaatt-ggtgatccatttcataaacaacagaaccagaaaaggaaactcttaatat |
32452552 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||| |||| |||| || | |||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
32452553 |
gtaggcacattattaggaacatcctgatcaccttcaaactttcccaagtagatagcacattcttaggaaatcacaaa-agatctgattttgtgctaaaag |
32452651 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|| |||||||||||| |||||||||| |||| ||||||||||||||||| |||||| | ||||||||||| | |||| ||||||| |||||||| |||| |
|
|
| T |
32452652 |
cacacagcttgaccaataagaataaaggcgtggattccttaaataaaataacgcgtgggaaaaacaaggcaagatgcatgtcaactgaaccatgccagga |
32452751 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
32452752 |
tgttgg |
32452757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 15002853 - 15002549
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcatta-atcttgttgggcttcagaacaatccggtgatccatttcacgta-caacagaataagaaaaggaaactcctaata |
214 |
Q |
| |
|
||||||||||||||| |||||| || || ||||||||||||||||||||| ||||||||||||||| | || || || |||||||||||||| ||||| |
|
|
| T |
15002853 |
aatactgaagcaatacgggtcagtacattttgttgggcttcagaacaatc-ggtgatccatttcacaaaacaccataactagaaaaggaaactcttaata |
15002755 |
T |
|
| Q |
215 |
tgtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaa |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| || | |||||||||| || |||| |||||||| |||||||||| |
|
|
| T |
15002754 |
tgtaggcacattattaggaacatcctgatcacctccaaacttttctaagtagataacacattcttaggaaatcaaaaac-gatctgattctgtgctaaaa |
15002656 |
T |
|
| Q |
315 |
atacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagg |
414 |
Q |
| |
|
||||| |||||||||||||| ||||| |||| |||||||||| || || |||||||| ||||||||||| ||||||||||||| |||||||| | | |
|
|
| T |
15002655 |
gcacgcaccttgaccaacaagagtaaaggcgtggattccttaaaaaagttaacgcgtgcgaaaaacaaggcaatgtgcaggtcaactgaaccatgccacg |
15002556 |
T |
|
| Q |
415 |
atgttgg |
421 |
Q |
| |
|
||||||| |
|
|
| T |
15002555 |
atgttgg |
15002549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 19658393 - 19658440
Alignment:
| Q |
118 |
atactgaagcaatatggg-tcattaatcttgttgggcttcagaacaat |
164 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
19658393 |
atactgaagcaatatgggctcaataatcttgttgggcttcagaacaat |
19658440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0143 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold0143
Description:
Target: scaffold0143; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 117 - 421
Target Start/End: Original strand, 36764 - 37067
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||||| || ||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
36764 |
aatactgaagcaatacgggtcagtacactttgttgggcttcagaacaatc-ggtgatccatttcataaacaacagaaccagaaaaggaaactcctaatat |
36862 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||||| |||| || | |||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
36863 |
gtaggcacattattaggaacatcctgatcacctccaaactttactaagtagataacacattcttaggaaatcacaaac-gatctgattttgtgctaaaag |
36961 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
|| ||||||||||||||||||||||| | || ||||||||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||| |||| |
|
|
| T |
36962 |
cacacagcttgaccaacaagaataaaggcatggattccttaaataaaataatgcgtgcgaaaaacaaggcaaggtgcaggtcaactgaaccatgccagga |
37061 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
37062 |
tgttgg |
37067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0328
Description:
Target: scaffold0328; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 16663 - 16360
Alignment:
| Q |
117 |
aatactgaagcaatatgggtcattaatctt-gttgggcttcagaacaatccggtgatccatttcacgtacaacagaataagaaaaggaaactcctaatat |
215 |
Q |
| |
|
||||||||||||||| |||| | ||||||| ||||| |||| |||||| | ||||||| |||||| ||||||||| |||||||||||||||||| || |
|
|
| T |
16663 |
aatactgaagcaatacgggtgagtaatctttgttggatttcataacaattag-tgatccaattcacgaacaacagaaccagaaaaggaaactcctaacat |
16565 |
T |
|
| Q |
216 |
gtaggcacattattaggaacatcctgatcacctccaaaatttcctaagtggatatcaaaatcttaggaaagcacaaactgatctgatcatgtgctaaaaa |
315 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| ||||| ||||||||| |||| | | |||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
16564 |
gtaggcaaattattaggaacattctgatcaccaccaaacgttcctaagtagatagcttattcttaggaaatcacaaac-gatctgatcccgtgctaaaaa |
16466 |
T |
|
| Q |
316 |
tacgcagcttgaccaacaagaataaagacgtgaattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctagga |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||| |
|
|
| T |
16465 |
cacgcagcttgaccaacaagaataaagacgtgcattccttaaataaaatagcgcgtgcgtaaaataaggcagggtgcaggttaattgaaccatgctagga |
16366 |
T |
|
| Q |
416 |
tgttgg |
421 |
Q |
| |
|
|||||| |
|
|
| T |
16365 |
tgttgg |
16360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 103606 - 103673
Alignment:
| Q |
350 |
ttccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactaaaccatgctaggatgt |
418 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
103606 |
ttccttaaataaaataacgcgtgcg-aaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgt |
103673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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