View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6641_low_4 (Length: 694)

Name: NF6641_low_4
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6641_low_4
NF6641_low_4
[»] chr8 (45 HSPs)
chr8 (101-374)||(33341963-33342238)
chr8 (446-684)||(33342310-33342548)
chr8 (465-682)||(16794185-16794402)
chr8 (458-678)||(28239718-28239939)
chr8 (446-683)||(44099907-44100143)
chr8 (447-675)||(11196766-11196991)
chr8 (446-683)||(11725555-11725791)
chr8 (446-654)||(15597170-15597378)
chr8 (446-683)||(19876085-19876321)
chr8 (452-678)||(35580337-35580563)
chr8 (446-683)||(42448000-42448239)
chr8 (450-683)||(27747086-27747319)
chr8 (446-683)||(2655742-2655981)
chr8 (446-683)||(9619330-9619569)
chr8 (446-675)||(4808837-4809067)
chr8 (446-684)||(9072590-9072830)
chr8 (451-684)||(33895959-33896194)
chr8 (446-683)||(43890097-43890336)
chr8 (449-683)||(34611680-34611915)
chr8 (446-659)||(15046765-15046980)
chr8 (446-684)||(9498571-9498812)
chr8 (458-675)||(14906904-14907123)
chr8 (446-658)||(44577909-44578121)
chr8 (499-676)||(43192326-43192503)
chr8 (468-658)||(33298747-33298940)
chr8 (457-684)||(29777113-29777331)
chr8 (451-683)||(32724454-32724695)
chr8 (450-683)||(11464049-11464282)
chr8 (466-658)||(39153141-39153336)
chr8 (458-553)||(17949132-17949226)
chr8 (458-658)||(37565878-37566079)
chr8 (452-527)||(12173381-12173455)
chr8 (452-527)||(12417809-12417883)
chr8 (613-684)||(23851466-23851538)
chr8 (479-557)||(17427319-17427396)
chr8 (479-557)||(17430969-17431046)
chr8 (552-659)||(24099283-24099390)
chr8 (579-658)||(29617303-29617382)
chr8 (558-658)||(3673404-3673501)
chr8 (490-532)||(18733938-18733980)
chr8 (465-531)||(24853564-24853630)
chr8 (449-503)||(31013763-31013817)
chr8 (457-502)||(23230494-23230539)
chr8 (594-658)||(15889577-15889641)
chr8 (635-683)||(43135552-43135600)
[»] chr4 (62 HSPs)
chr4 (446-684)||(35964947-35965186)
chr4 (451-683)||(10359520-10359752)
chr4 (458-678)||(12265345-12265565)
chr4 (446-674)||(18138895-18139124)
chr4 (446-674)||(49126108-49126337)
chr4 (446-675)||(10389735-10389964)
chr4 (446-683)||(4643734-4643974)
chr4 (446-683)||(2624375-2624613)
chr4 (448-683)||(9528850-9529087)
chr4 (446-676)||(25273753-25273992)
chr4 (446-678)||(43444271-43444504)
chr4 (446-658)||(51317863-51318075)
chr4 (446-684)||(868035-868279)
chr4 (459-683)||(53616623-53616849)
chr4 (446-683)||(9283789-9284027)
chr4 (446-675)||(34024419-34024647)
chr4 (447-683)||(31381645-31381881)
chr4 (457-684)||(56194488-56194718)
chr4 (446-676)||(1531784-1532017)
chr4 (446-656)||(9645550-9645760)
chr4 (446-683)||(38706683-38706921)
chr4 (458-675)||(35261077-35261299)
chr4 (458-683)||(46991103-46991329)
chr4 (457-683)||(37188568-37188792)
chr4 (446-678)||(20569130-20569366)
chr4 (446-678)||(43153992-43154231)
chr4 (451-657)||(21090036-21090241)
chr4 (446-678)||(50766490-50766720)
chr4 (492-683)||(52097889-52098084)
chr4 (451-677)||(6972692-6972920)
chr4 (490-678)||(32952728-32952913)
chr4 (446-676)||(2115568-2115799)
chr4 (458-684)||(27593799-27594036)
chr4 (490-649)||(8009369-8009526)
chr4 (511-683)||(3336129-3336302)
chr4 (499-683)||(29965565-29965751)
chr4 (446-553)||(47416762-47416868)
chr4 (446-683)||(44947281-44947528)
chr4 (494-678)||(14183729-14183913)
chr4 (458-535)||(5333581-5333658)
chr4 (451-533)||(5333655-5333736)
chr4 (577-683)||(49410232-49410339)
chr4 (458-563)||(1008185-1008289)
chr4 (576-683)||(47417670-47417778)
chr4 (446-650)||(1931723-1931914)
chr4 (560-658)||(18048863-18048961)
chr4 (451-675)||(41255361-41255585)
chr4 (472-565)||(35351253-35351345)
chr4 (487-553)||(49680456-49680521)
chr4 (548-659)||(36204414-36204526)
chr4 (498-533)||(23100617-23100652)
chr4 (629-675)||(23100740-23100787)
chr4 (446-504)||(3338816-3338874)
chr4 (584-658)||(43853446-43853520)
chr4 (549-658)||(51888242-51888351)
chr4 (470-648)||(21554817-21554995)
chr4 (449-492)||(23926030-23926073)
chr4 (574-683)||(45228014-45228124)
chr4 (449-503)||(53810889-53810943)
chr4 (449-502)||(2520638-2520691)
chr4 (449-502)||(4142949-4143002)
chr4 (446-495)||(50179649-50179698)
[»] chr5 (52 HSPs)
chr5 (459-684)||(15570791-15571015)
chr5 (452-678)||(27266837-27267065)
chr5 (446-678)||(28235454-28235686)
chr5 (457-683)||(21060256-21060481)
chr5 (446-684)||(30371593-30371833)
chr5 (458-683)||(43261792-43262016)
chr5 (457-684)||(7150307-7150535)
chr5 (446-684)||(19280917-19281155)
chr5 (446-683)||(34881579-34881824)
chr5 (446-683)||(16981159-16981396)
chr5 (447-683)||(19259785-19260020)
chr5 (446-683)||(36344464-36344700)
chr5 (452-676)||(781264-781487)
chr5 (472-678)||(2057816-2058023)
chr5 (446-681)||(18677440-18677677)
chr5 (446-683)||(35475311-35475547)
chr5 (449-678)||(20257673-20257902)
chr5 (446-678)||(7246827-7247060)
chr5 (457-672)||(7613042-7613265)
chr5 (490-678)||(42886392-42886579)
chr5 (446-678)||(7241651-7241884)
chr5 (446-678)||(27751783-27752026)
chr5 (457-683)||(26578129-26578358)
chr5 (499-683)||(30298130-30298313)
chr5 (470-683)||(27576323-27576537)
chr5 (446-553)||(10649322-10649428)
chr5 (449-678)||(7886916-7887145)
chr5 (457-601)||(11767687-11767832)
chr5 (458-683)||(41184413-41184643)
chr5 (458-684)||(3271374-3271606)
chr5 (450-601)||(11192240-11192390)
chr5 (446-565)||(6445805-6445923)
chr5 (446-683)||(42579746-42579994)
chr5 (457-671)||(43148610-43148825)
chr5 (451-567)||(28097027-28097142)
chr5 (458-532)||(14211082-14211156)
chr5 (449-532)||(2979475-2979560)
chr5 (459-651)||(19983361-19983556)
chr5 (457-505)||(41418694-41418743)
chr5 (480-565)||(42432803-42432887)
chr5 (616-683)||(22978896-22978964)
chr5 (618-684)||(4954032-4954099)
chr5 (584-658)||(10332579-10332653)
chr5 (457-503)||(33029730-33029776)
chr5 (449-505)||(31391949-31392005)
chr5 (584-659)||(16758523-16758598)
chr5 (449-503)||(38007198-38007252)
chr5 (613-675)||(42432934-42432996)
chr5 (477-546)||(10148698-10148766)
chr5 (580-649)||(10649646-10649715)
chr5 (479-557)||(35631791-35631869)
chr5 (470-565)||(42432172-42432264)
[»] chr3 (57 HSPs)
chr3 (446-681)||(37169094-37169329)
chr3 (446-675)||(46934506-46934735)
chr3 (458-678)||(22802897-22803118)
chr3 (457-683)||(46178451-46178670)
chr3 (446-683)||(25631499-25631738)
chr3 (458-683)||(29503338-29503562)
chr3 (446-678)||(49552202-49552434)
chr3 (448-678)||(25162302-25162532)
chr3 (448-678)||(39917376-39917605)
chr3 (446-683)||(35499171-35499413)
chr3 (457-683)||(36905996-36906223)
chr3 (446-683)||(4178428-4178666)
chr3 (451-683)||(32607337-32607570)
chr3 (446-683)||(51202227-51202460)
chr3 (457-683)||(38440554-38440777)
chr3 (447-676)||(44907379-44907609)
chr3 (457-683)||(50611391-50611617)
chr3 (446-683)||(14464371-14464611)
chr3 (446-678)||(12115957-12116194)
chr3 (446-623)||(4172430-4172607)
chr3 (446-673)||(38855019-38855247)
chr3 (463-683)||(17237683-17237906)
chr3 (451-553)||(3850560-3850661)
chr3 (446-678)||(25849684-25849906)
chr3 (472-678)||(42719410-42719613)
chr3 (516-684)||(30648691-30648860)
chr3 (446-683)||(31793944-31794172)
chr3 (548-683)||(36734665-36734801)
chr3 (574-683)||(21488082-21488192)
chr3 (446-607)||(47980713-47980879)
chr3 (446-607)||(47990000-47990166)
chr3 (446-607)||(47999287-47999453)
chr3 (446-607)||(48008574-48008740)
chr3 (447-589)||(2342357-2342498)
chr3 (464-528)||(21487993-21488057)
chr3 (446-534)||(36735275-36735363)
chr3 (498-606)||(54378816-54378923)
chr3 (574-684)||(3848891-3849002)
chr3 (560-658)||(4396365-4396463)
chr3 (457-501)||(6823553-6823597)
chr3 (500-598)||(30829892-30829989)
chr3 (587-659)||(46322355-46322427)
chr3 (547-658)||(12947305-12947416)
chr3 (555-658)||(29922011-29922114)
chr3 (555-658)||(29971164-29971267)
chr3 (458-524)||(19605927-19605993)
chr3 (459-532)||(3606637-3606710)
chr3 (482-555)||(6913249-6913321)
chr3 (449-502)||(10232911-10232964)
chr3 (449-502)||(21431466-21431518)
chr3 (458-499)||(30648898-30648938)
chr3 (449-502)||(48650930-48650983)
chr3 (449-502)||(54148829-54148882)
chr3 (635-674)||(6910691-6910731)
chr3 (446-502)||(9797725-9797781)
chr3 (458-537)||(16235269-16235349)
chr3 (458-502)||(21290014-21290058)
[»] chr7 (53 HSPs)
chr7 (458-676)||(31235772-31235991)
chr7 (458-678)||(6001899-6002120)
chr7 (449-683)||(23425346-23425579)
chr7 (446-675)||(35667213-35667442)
chr7 (448-676)||(20116451-20116679)
chr7 (451-684)||(22927842-22928076)
chr7 (447-684)||(1448802-1449039)
chr7 (448-683)||(42311148-42311384)
chr7 (452-683)||(48207775-48208004)
chr7 (446-678)||(26583580-26583813)
chr7 (458-683)||(42067035-42067259)
chr7 (446-683)||(46821880-46822119)
chr7 (446-683)||(26492231-26492469)
chr7 (446-683)||(35496148-35496386)
chr7 (471-678)||(32521905-32522117)
chr7 (446-684)||(1485229-1485467)
chr7 (446-678)||(21266258-21266489)
chr7 (450-683)||(45199006-45199238)
chr7 (446-683)||(46338919-46339158)
chr7 (447-678)||(17610998-17611224)
chr7 (451-678)||(23085391-23085620)
chr7 (446-683)||(42408228-42408466)
chr7 (446-590)||(36143732-36143875)
chr7 (446-678)||(14627857-14628091)
chr7 (451-684)||(433663-433898)
chr7 (496-683)||(46818389-46818577)
chr7 (446-678)||(2843219-2843438)
chr7 (453-678)||(35261170-35261397)
chr7 (511-678)||(23786508-23786674)
chr7 (446-683)||(32684551-32684772)
chr7 (519-684)||(17222972-17223136)
chr7 (451-683)||(20083203-20083441)
chr7 (521-683)||(6558817-6558981)
chr7 (446-650)||(17499666-17499857)
chr7 (446-650)||(17553357-17553548)
chr7 (574-683)||(34773705-34773815)
chr7 (457-565)||(3860829-3860935)
chr7 (555-658)||(24069425-24069528)
chr7 (459-565)||(1100859-1100963)
chr7 (498-658)||(5546277-5546437)
chr7 (514-568)||(43369855-43369908)
chr7 (589-684)||(19560007-19560103)
chr7 (548-659)||(969477-969588)
chr7 (449-532)||(24351006-24351091)
chr7 (449-532)||(35132794-35132879)
chr7 (490-562)||(1097698-1097770)
chr7 (446-487)||(12539125-12539166)
chr7 (449-502)||(19296721-19296774)
chr7 (450-532)||(19404917-19405001)
chr7 (449-502)||(37837653-37837706)
chr7 (449-532)||(1749306-1749389)
chr7 (458-533)||(5078556-5078632)
chr7 (449-505)||(42978451-42978507)
[»] chr6 (35 HSPs)
chr6 (448-657)||(34489116-34489327)
chr6 (446-658)||(23947317-23947528)
chr6 (446-683)||(17237259-17237495)
chr6 (446-678)||(25064101-25064335)
chr6 (446-683)||(12652806-12653048)
chr6 (458-678)||(28635099-28635321)
chr6 (451-684)||(16419029-16419263)
chr6 (447-676)||(33543602-33543830)
chr6 (446-678)||(33740556-33740789)
chr6 (446-683)||(4984540-4984788)
chr6 (446-683)||(8496831-8497071)
chr6 (458-683)||(4468437-4468662)
chr6 (458-658)||(25337448-25337648)
chr6 (452-675)||(8196388-8196612)
chr6 (458-683)||(8028091-8028317)
chr6 (451-684)||(10228550-10228784)
chr6 (458-683)||(12165719-12165943)
chr6 (446-683)||(7881075-7881314)
chr6 (446-683)||(4088325-4088564)
chr6 (496-684)||(35001506-35001695)
chr6 (446-683)||(7876017-7876256)
chr6 (469-684)||(4351968-4352189)
chr6 (446-565)||(33109700-33109818)
chr6 (577-678)||(33110608-33110710)
chr6 (452-553)||(17334647-17334747)
chr6 (584-658)||(26588503-26588577)
chr6 (490-533)||(8266545-8266588)
chr6 (478-553)||(5582757-5582831)
chr6 (498-564)||(13436705-13436770)
chr6 (449-503)||(23128460-23128514)
chr6 (457-523)||(23217124-23217190)
chr6 (451-532)||(9508841-9508921)
chr6 (449-502)||(12170337-12170390)
chr6 (456-564)||(25398442-25398547)
chr6 (627-659)||(31296848-31296880)
[»] chr1 (56 HSPs)
chr1 (478-683)||(39987292-39987497)
chr1 (446-672)||(18569294-18569521)
chr1 (446-683)||(28035009-28035247)
chr1 (446-684)||(51868617-51868856)
chr1 (458-683)||(5324531-5324756)
chr1 (458-678)||(25406262-25406483)
chr1 (451-676)||(51871739-51871964)
chr1 (446-683)||(40880986-40881224)
chr1 (446-678)||(30818329-30818556)
chr1 (446-684)||(7342592-7342831)
chr1 (446-683)||(5701127-5701367)
chr1 (446-684)||(7312077-7312309)
chr1 (446-684)||(9172358-9172599)
chr1 (446-684)||(9180340-9180581)
chr1 (446-683)||(50272113-50272351)
chr1 (457-683)||(14545401-14545625)
chr1 (446-683)||(33291391-33291630)
chr1 (451-676)||(38520511-38520739)
chr1 (448-683)||(7997659-7997897)
chr1 (452-678)||(27872615-27872841)
chr1 (451-684)||(50166071-50166305)
chr1 (454-658)||(39927553-39927758)
chr1 (446-678)||(11453805-11454038)
chr1 (482-678)||(9919295-9919492)
chr1 (457-683)||(3871289-3871516)
chr1 (497-684)||(34519054-34519241)
chr1 (451-683)||(20266177-20266410)
chr1 (446-676)||(30878945-30879176)
chr1 (446-676)||(35584598-35584832)
chr1 (462-676)||(41081683-41081899)
chr1 (451-676)||(45426046-45426268)
chr1 (446-683)||(19715868-19716107)
chr1 (451-678)||(44637297-44637524)
chr1 (452-625)||(19723209-19723382)
chr1 (452-553)||(25728064-25728164)
chr1 (452-678)||(48365743-48365956)
chr1 (515-678)||(31836745-31836910)
chr1 (446-678)||(50148242-50148473)
chr1 (446-553)||(40646558-40646664)
chr1 (552-683)||(9687177-9687309)
chr1 (451-528)||(45805938-45806015)
chr1 (574-676)||(33817161-33817263)
chr1 (574-676)||(33876631-33876733)
chr1 (488-565)||(30558748-30558823)
chr1 (449-531)||(16161676-16161760)
chr1 (555-658)||(47132861-47132964)
chr1 (457-578)||(19052413-19052532)
chr1 (520-659)||(4396914-4397053)
chr1 (458-592)||(18649949-18650082)
chr1 (464-531)||(34528578-34528645)
chr1 (584-658)||(12635157-12635231)
chr1 (613-659)||(16262877-16262923)
chr1 (449-503)||(29738830-29738884)
chr1 (613-678)||(45805806-45805872)
chr1 (449-532)||(49626754-49626839)
chr1 (613-658)||(40646707-40646752)
[»] chr2 (65 HSPs)
chr2 (446-678)||(2808450-2808681)
chr2 (446-678)||(459252-459485)
chr2 (449-683)||(32913115-32913348)
chr2 (452-684)||(45128080-45128313)
chr2 (446-683)||(30420547-30420786)
chr2 (446-683)||(6173502-6173740)
chr2 (457-683)||(7015684-7015910)
chr2 (459-676)||(17319208-17319421)
chr2 (457-678)||(4192720-4192940)
chr2 (446-683)||(9986315-9986558)
chr2 (446-683)||(21570381-21570619)
chr2 (446-683)||(27249124-27249362)
chr2 (446-683)||(3270202-3270439)
chr2 (446-683)||(36233875-36234116)
chr2 (446-683)||(27477025-27477256)
chr2 (446-684)||(8971600-8971839)
chr2 (447-683)||(34598858-34599095)
chr2 (446-678)||(3725051-3725283)
chr2 (446-619)||(40626066-40626238)
chr2 (477-684)||(41430929-41431137)
chr2 (446-684)||(20047054-20047292)
chr2 (490-678)||(8805781-8805969)
chr2 (469-676)||(26025390-26025598)
chr2 (452-683)||(40659905-40660134)
chr2 (457-684)||(8308054-8308279)
chr2 (459-673)||(39641841-39642057)
chr2 (499-675)||(22421659-22421835)
chr2 (450-684)||(25086908-25087146)
chr2 (458-683)||(27949306-27949534)
chr2 (457-650)||(4228013-4228207)
chr2 (448-676)||(37614105-37614334)
chr2 (446-678)||(9374534-9374760)
chr2 (451-598)||(32680640-32680788)
chr2 (465-654)||(32197798-32197986)
chr2 (446-601)||(41712821-41712976)
chr2 (518-683)||(3269084-3269251)
chr2 (518-683)||(3269643-3269810)
chr2 (505-641)||(10248077-10248211)
chr2 (613-684)||(84153-84224)
chr2 (451-671)||(30923458-30923678)
chr2 (467-553)||(42949605-42949691)
chr2 (457-672)||(24587595-24587804)
chr2 (574-678)||(31580567-31580672)
chr2 (488-565)||(31581812-31581888)
chr2 (446-516)||(33229129-33229199)
chr2 (457-557)||(33140309-33140408)
chr2 (451-533)||(18694922-18695005)
chr2 (555-658)||(29574660-29574763)
chr2 (449-532)||(3308790-3308875)
chr2 (452-570)||(9418298-9418413)
chr2 (516-675)||(36323799-36323955)
chr2 (458-532)||(10237376-10237452)
chr2 (449-532)||(32448785-32448869)
chr2 (449-504)||(12677489-12677544)
chr2 (558-658)||(4264443-4264540)
chr2 (448-502)||(7678073-7678127)
chr2 (574-640)||(12647970-12648036)
chr2 (464-531)||(14955389-14955458)
chr2 (458-675)||(39285275-39285496)
chr2 (449-502)||(4778604-4778657)
chr2 (449-502)||(7646323-7646376)
chr2 (449-531)||(12648088-12648172)
chr2 (489-533)||(13719283-13719327)
chr2 (613-684)||(32679082-32679154)
chr2 (627-659)||(37994316-37994348)
[»] scaffold0495 (1 HSPs)
scaffold0495 (451-684)||(5269-5503)
[»] scaffold0014 (1 HSPs)
scaffold0014 (494-683)||(201346-201534)
[»] scaffold0311 (2 HSPs)
scaffold0311 (446-593)||(8586-8732)
scaffold0311 (634-683)||(8745-8795)
[»] scaffold0003 (1 HSPs)
scaffold0003 (446-684)||(361771-362005)
[»] scaffold0146 (1 HSPs)
scaffold0146 (463-683)||(16293-16516)
[»] scaffold0002 (1 HSPs)
scaffold0002 (498-677)||(453851-454030)
[»] scaffold0264 (1 HSPs)
scaffold0264 (449-651)||(20402-20600)
[»] scaffold0426 (2 HSPs)
scaffold0426 (574-676)||(6299-6402)
scaffold0426 (463-532)||(6221-6290)
[»] scaffold0347 (1 HSPs)
scaffold0347 (584-658)||(6014-6088)
[»] scaffold0022 (1 HSPs)
scaffold0022 (548-683)||(83411-83544)
[»] scaffold0009 (1 HSPs)
scaffold0009 (449-531)||(58243-58327)
[»] scaffold0127 (1 HSPs)
scaffold0127 (449-503)||(15333-15387)
[»] scaffold0608 (1 HSPs)
scaffold0608 (446-495)||(108-157)
[»] scaffold0136 (1 HSPs)
scaffold0136 (613-658)||(34779-34824)
[»] scaffold0042 (1 HSPs)
scaffold0042 (558-658)||(92527-92627)


Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-118; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 101 - 374
Target Start/End: Original strand, 33341963 - 33342238
Alignment:
Q  101 gccttgtaacccaagaaaaagaaattgagctatgagcttagcagaaatacaataaataaaaaatttagtcacataattcnnnnnnntcacttgagacctg 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  33341963 gccttgtaacccaagaaaaagaaattgagctatgagcttagctgaaatacaataaataaaaaatttagtcacataattcaaaaaaatcacttgagacctg 33342062  T
Q  201 tactagtagaccaagttgaaatttcaaatttccaccatgcttatttgtagtttattcagctaacctaaatgcttatttcttatgaattg--atatatatc 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  33342063 tactagtagaccaagttgaaatttcaaatttccaccatgcttatttgtagtttattcatctaacctaaatgcttatttcttatgaattgatatatatatc 33342162  T
Q  299 acgccttttcacacgaaaattatattatattcgactaggttgtattgaacaatttggagtttctatcttctatgaa 374  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||    
T  33342163 acgcctttccacacgaaaattatattatattcgactaggttgtattgaataatttggcgttcctatctcctatgaa 33342238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 33342310 - 33342548
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  33342310 attgaggggtggttttgggtcaatttttaacctgaaatcacccctcttcatccttttttctctaattcaatctaaataagtgatttttcacatagatcta 33342409  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  33342410 ggttttttcttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtttatttg 33342509  T
Q  646 attcatattgaaaatcaattattcaatcaaagaattgga 684  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  33342510 attcatattgaagatcaattattcaatcaaagaattgga 33342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 465 - 682
Target Start/End: Original strand, 16794185 - 16794402
Alignment:
Q  465 tcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgattt 564  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  16794185 tcaatttttgacttgaaatcacccatcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctagg-tttttcttcgtgattt 16794283  T
Q  565 cgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaa 663  Q
    | ||| ||||| |||||| | ||||||| |||||||| |||   ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  16794284 catcatccgagagtggtgttatgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatcaa 16794383  T
Q  664 ttattcaatcaaagaattg 682  Q
    |||||||||||||||||||    
T  16794384 ttattcaatcaaagaattg 16794402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 458 - 678
Target Start/End: Original strand, 28239718 - 28239939
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||| |    
T  28239718 ttttgggtcaatttttgacctgaaatcacctctcttcatctttttctctctatttcaatctaaataagtgttttttcacatagatctaggttttctctac 28239817  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    | ||||||||||   |||||||| ||| ||||||| |||||||| ||||| ||  ||||||| | |||||||||||||||||||||||||| ||||||||    
T  28239818 gcgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaa 28239917  T
Q  658 a-atcaattattcaatcaaaga 678  Q
    | ||||||||||||||||||||    
T  28239918 agatcaattattcaatcaaaga 28239939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 44100143 - 44099907
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||||| | |||||||| |||||||    
T  44100143 attgaggggtggttttgggtcgattcttgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagtta-ttttcacatagatcta 44100045  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
     |||||||||| |||||||  ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| || ||||||||||||||||    
T  44100044 agttttttctttgtgattt-atcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttg 44099946  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  44099945 attcatattgaaagatcaattattcaatcaaagagttgg 44099907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 447 - 675
Target Start/End: Original strand, 11196766 - 11196991
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag 546  Q
    ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||||| |  |||||||||||||||||||||| |||| ||||||||    
T  11196766 ttgaggggtggttttgggtcaattcttgacctgaaatcatccatcttcatctttttctctat--ttcaatctaaataagtgatttt-cacatagatctag 11196862  T
Q  547 gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
    ||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| |||| || |||||||||||||||||    
T  11196863 gttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttga 11196962  T
Q  647 ttcatattgaaaatcaattattcaatcaa 675  Q
    ||||||||||| ||| |||||||||||||    
T  11196963 ttcatattgaagatcgattattcaatcaa 11196991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 11725555 - 11725791
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||| |||||||    
T  11725555 attgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcgtctttttctctttatttcaatctaaataagtg-tttttcacatagatcta 11725653  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||| ||| |  ||||||||||| |||||||  ||||||| ||||   |  ||||||||||| | || ||||||||||||| ||    
T  11725654 ggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcgacattgtttgatttcccattttcttgcggtgttcatctg 11725753  T
Q  646 attcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    |||||||||||| ||| |||||||||| ||||| ||||    
T  11725754 attcatattgaagatcgattattcaattaaagatttgg 11725791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 446 - 654
Target Start/End: Complemental strand, 15597378 - 15597170
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatct 544  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||| |||| ||||||    
T  15597378 attgaggggtggttttcagtcaatttttgacctgaaatcacccctcttcatctttttctagtccatttcaatctaaataagtgatttt-cacatagatct 15597280  T
Q  545 aggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| || ||  |   ||||||| |||| ||||| ||||||||||||    
T  15597279 aggttttttcttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtgaggccttggttgattttccgttttgttacggtgttcattt 15597180  T
Q  645 gattcatatt 654  Q
    ||||||||||    
T  15597179 gattcatatt 15597170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 19876085 - 19876321
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||| || | ||||||||||||||||  || |||||||||||||||||||||| |||| ||||| |    
T  19876085 attgaggggtggttttgggtcaattcttgacctgaaattactcatcttcatctttttctcaatatttcaatctaaataagtgatttt-cacatagatcaa 19876183  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||||| |||||||| ||| |  ||||| ||||| ||||||| |||||||| ||||| ||  ||||||| ||||| || ||| ||||||||||||    
T  19876184 ggttttttctttgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcatttg 19876283  T
Q  646 attcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    |||||||||||| ||| |||||||||||||||| ||||    
T  19876284 attcatattgaagatcgattattcaatcaaagatttgg 19876321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 452 - 678
Target Start/End: Original strand, 35580337 - 35580563
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| |||||||||||||||||||| | ||||||| | |||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||    
T  35580337 gggtggttttgggtcaatttttgacataaaatcactcatcttcatctttttctctctatttcaatttaaataagtgatttt-cacatagatctaggtttt 35580435  T
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    |||||||||||||| ||| |  ||||||||||| ||||||| |||||||| ||||  ||  |||||||| |||| || ||||||||||| ||||||||||    
T  35580436 ttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcat 35580535  T
Q  652 attgaa-aatcaattattcaatcaaaga 678  Q
    ||||||  ||| |||||||| |||||||    
T  35580536 attgaatgatcgattattcactcaaaga 35580563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 42448239 - 42448000
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || | |||||||    
T  42448239 attgaggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-tttacatatagatcta 42448141  T
Q  546 ggttt--tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |||||  |||||| |||||||| ||| |  ||||||| ||| ||||||| |||||||| |||||  |  ||||||||  ||| ||  |||||||||||||    
T  42448140 ggttttgtttctttgtgatttcatcatctaagtgtggaggtttgttgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatt 42448041  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| ||| |||||||||||||||| ||||    
T  42448040 tgattcatattgaaatatcgattattcaatcaaagatttgg 42448000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 450 - 683
Target Start/End: Complemental strand, 27747319 - 27747086
Alignment:
Q  450 aggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtt 549  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||| |||| | |||||| ||||||||| | |||||||| | || || |||    
T  27747319 aggggtagttttgggtcaatttttgacttgaaatcaccattcttcatctttttatctccatttcaatttaaataagt-aattttcacataaatataagtt 27747221  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||||||||||||  || | | |||||||||||||||||| ||| |||| ||||      |||||||||| || |||||||||||||||||||||||    
T  27747220 ttttcttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattc 27747121  T
Q  650 atattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||| |||||||||||||||||||| ||||    
T  27747120 atattgaaagatcaattattcaatcaaagatttgg 27747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 2655742 - 2655981
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||| ||| |||||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  2655742 attgagcggtggttttgggtcaattcttgacctgcaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 2655840  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||| | ||  ||||||||||||| ||  |||||||||||||    
T  2655841 gattttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatt 2655940  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||    
T  2655941 tgattcatattgaaagatcgattgttcaatcaaagatttgg 2655981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 9619569 - 9619330
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||| ||    
T  9619569 attgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagattta 9619471  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   ||||||| | || ||||| ||| |   |||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||||    
T  9619470 gattttttttcattgtaatttcatcatctacgtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatt 9619371  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| ||| ||| || ||||||||| ||||    
T  9619370 tgattcatattgaaagatcgattgttaaatcaaagatttgg 9619330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 446 - 675
Target Start/End: Original strand, 4808837 - 4809067
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||||| ||||||||||| |||||||| |||||||    
T  4808837 attgaggggtggttttgggtcaattcttgacctgaaattacccctcttcatctttttttctttatttcaatgtaaataagtga-ttttcacatagatcta 4808935  T
Q  546 g-gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |  ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||| |||| ||  ||||||||||||||    
T  4808936 gctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcattt 4809035  T
Q  645 gattcatattgaaa-atcaattattcaatcaa 675  Q
    |||||||||||||| ||| ||| |||||||||    
T  4809036 gattcatattgaaagatcgattgttcaatcaa 4809067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 9072590 - 9072830
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||| | |||||    
T  9072590 attggggggtggttttgggtcaatttttgacttgaaatcacccctcttcatctttttctctctatttcaatttaaataagtga-ctttcacataaatcta 9072688  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   ||||||||| |||||||| ||| |  ||||||||||| |||||||  || |||| ||||| ||  |||| |||||| | || ||||||||||||||    
T  9072689 gattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcatt 9072788  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    | |||| |||||||| ||| |||||||||||||||| |||||    
T  9072789 ttattcctattgaaagatcgattattcaatcaaagatttgga 9072830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 451 - 684
Target Start/End: Original strand, 33895959 - 33896194
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--t 548  Q
    ||||| |||||||||||||| |||| || || ||||||||||||||||||||||||||| || |||||||||||||||  ||||||| |||||||||  |    
T  33895959 ggggtggttttgggtcaattcttgatctaaagtcacccctcttcatctttttctctctatttaaatctaaataagtga-ctttcacatagatctaggttt 33896057  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    |||||||| |||||||| ||| |  ||||||||||| ||||||| ||| |||| ||||| ||  |||| |||||||| || ||||||||||||||| |||    
T  33896058 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcttcttgtgcggcgttgtttgttttcccgtcttcttgcggtgttcattttatt 33896157  T
Q  649 catattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |  ||||||| ||| |||||||||||||||| |||||    
T  33896158 ccaattgaaagatcgattattcaatcaaagatttgga 33896194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 43890336 - 43890097
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||||    
T  43890336 attgaggggtggttttggatcattttttgacctgaaatcacccctcttcatctttttctctttaattcaatctaaataagtga-ttttgacatagatcta 43890238  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   ||||||||| || ||||| ||| |  ||| ||||| | ||||||| |||||||| ||||  ||  ||||||||||||| ||  | |||||||||||    
T  43890237 gattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttcatt 43890138  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||| |||||| ||| ||| |||||||||||| ||||    
T  43890137 tgattcattttgaaagatcgattgttcaatcaaagatttgg 43890097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 449 - 683
Target Start/End: Original strand, 34611680 - 34611915
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg- 547  Q
    ||||||| |||||||||||||| ||||||||||||||| | ||||||| ||||||| |||| |||| ||||||||||||| |||||||| | |||||||     
T  34611680 gaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatatttttctttctatttcagtctaaataagtga-ttttcacataaatctaggt 34611778  T
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| ||||  |  |||||||||||||||||    
T  34611779 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgat 34611878  T
Q  648 tcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||| || | | ||||||||||||| ||||    
T  34611879 tcatattgaaagataagtaattcaatcaaagatttgg 34611915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 446 - 659
Target Start/End: Original strand, 15046765 - 15046980
Alignment:
Q  446 attgaggggtagttttggg-tcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatc 543  Q
    ||||||||||  ||||||| |||||||||||  |||||||||| ||||||||||||||||  || | ||||||  || ||||||||||| |||| |||||    
T  15046765 attgaggggtgattttggggtcaatttttgatatgaaatcacctctcttcatctttttctagtccatttcaattcaagtaagtgatttt-cacatagatc 15046863  T
Q  544 taggtttt-ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||   |||||||||| || ||| |||| |||| ||    
T  15046864 taggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtcttggtgcgatgtttat 15046963  T
Q  643 ttgattcatattgaaaa 659  Q
    |||||| ||||||||||    
T  15046964 ttgattgatattgaaaa 15046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 9498812 - 9498571
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||| |||| ||    
T  9498812 attgaggggtggttttgggtcaattctt-acctgaaatcacccctcttcatctttttatctttatttcaatctaaataagtgatttt-cacatagattta 9498715  T
Q  546 ggtttttt----cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
    ||||||||    ||| || ||||| ||| |  ||||||||| | ||||||| || ||||| |||||  |  ||||||||||||| ||  |||||||||||    
T  9498714 ggttttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttca 9498615  T
Q  642 tttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||||||||||| ||| ||| ||| |||||||||||| |||||    
T  9498614 tttgattcatattaaaagatcgattgttcaatcaaagatttgga 9498571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 458 - 675
Target Start/End: Complemental strand, 14907123 - 14906904
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggt--tttttct 555  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||  |||||||    
T  14907123 ttttggatcaattcttgacctgaaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttctttttct 14907025  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | || ||||| ||| |  | ||||||| | |||||||||||||||| ||||| ||  ||||||||||||| ||  |||| |||||||||||||| ||||     
T  14907024 ttgtaatttcatcatcaaaatgtggtgatttgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtatta 14906925  T
Q  656 aaa-atcaattattcaatcaa 675  Q
    ||| ||| ||| |||||||||    
T  14906924 aaagatcgattgttcaatcaa 14906904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 446 - 658
Target Start/End: Original strand, 44577909 - 44578121
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| ||||||| ||| |||| |||||||    
T  44577909 attgaggggtggttttgggtcaatttttgacctaaaatcactcctcttcatctttttctctctatttcaatctaactaagtga-tttacacatagatcta 44578007  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| || ||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||| || |||| | ||  |||||| || ||||    
T  44578008 ggtttttttctttgtaatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttcatctcccatcttcatgcggtatttattt 44578107  T
Q  645 gattcatattgaaa 658  Q
    |||| |||||||||    
T  44578108 gatttatattgaaa 44578121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 499 - 676
Target Start/End: Complemental strand, 43192503 - 43192326
Alignment:
Q  499 ttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgt 598  Q
    ||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||| |  ||||||||||| ||||||| |||||    
T  43192503 ttttctctctatttcaatctaaataagtggttttt-acatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 43192405  T
Q  599 cttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaa 676  Q
    ||| ||||| ||  |||||||| |||| || ||| |||||||||||||||||| |||||| ||| ||||||| ||||||    
T  43192404 cttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatcgattattcgatcaaa 43192326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 468 - 658
Target Start/End: Original strand, 33298747 - 33298940
Alignment:
Q  468 atttttgacctgaaatcacccctcttcatctttttct----ctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatt 563  Q
    |||||||| |||||| ||||  ||||||||||||| |    |||||||||||||||||||||||||||| |||| |||||||||||||  ||| ||||||    
T  33298747 atttttgagctgaaaacacctatcttcatctttttatttttctctaattcaatctaaataagtgatttt-cacatagatctaggttttacctttgtgatt 33298845  T
Q  564 tcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||| || ||| | |||||||||||||  ||||||| || |||||  ||||||||| ||| ||| ||||||||||||||||||||||| ||||    
T  33298846 tcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaa 33298940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 457 - 684
Target Start/End: Original strand, 29777113 - 29777331
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttct 555  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |           ||||||||| ||||||||    
T  29777113 gttttgggtcaattattgacatgaaatcactcctcttcatctttttctctctatttcaatctaaataagcg-----------agatctaggtttttttct 29777201  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||   |  |||| |||||||| || ||||||||||||||| |||| |||||    
T  29777202 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttattcctattg 29777301  T
Q  656 aaa-atcaattattcaatcaaagaattgga 684  Q
    ||| ||| |||||||||||||||| |||||    
T  29777302 aaagatcgattattcaatcaaagatttgga 29777331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 451 - 683
Target Start/End: Complemental strand, 32724695 - 32724454
Alignment:
Q  451 ggggtagttttgggtcaattt-ttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag--- 546  Q
    ||||| |||||||||||| || |||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||||       
T  32724695 ggggtggttttgggtcaaattattgacctgaaatcacttctcttcatctttt-ctctctatttcaatctaaataagtga-ttttcacatagatctagatt 32724598  T
Q  547 ------gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttc 640  Q
          ||||||||||  ||||||| ||| |  | ||||||||| ||||||| |||||||| ||||| ||  |||||||||| || ||  ||| ||||||    
T  32724597 ttttttgttttttctttatgatttcatcatctaactgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttc 32724498  T
Q  641 atttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  32724497 atttgattcatattgaaatatcgattattcaatcaaagatttgg 32724454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 450 - 683
Target Start/End: Original strand, 11464049 - 11464282
Alignment:
Q  450 aggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtt 549  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||  | |||||| || |||||| | ||||||||||||| |||| |||||||| ||    
T  11464049 aggggtggttttaggtcaattcttgacctgaaatcacccctcttcat--tcttctctttatttcaatttgaataagtgatttt-cacatagatctagatt 11464145  T
Q  550 tttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||  ||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||||  || ||  |||||||||||||||||    
T  11464146 ttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgat 11464245  T
Q  648 tcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||| ||| ||| |||||||||||| ||||    
T  11464246 tcatattgaaagatcgattgttcaatcaaagatttgg 11464282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 466 - 658
Target Start/End: Complemental strand, 39153336 - 39153141
Alignment:
Q  466 caatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatctaggt----tttttcttcgtg 560  Q
    |||||||||||| |||||||| | ||||||||||| |||  || | |||||| ||||||||||||||| |||| |||| |||||    ||||||||||||    
T  39153336 caatttttgacc-gaaatcactcatcttcatctttgtctagtcaatttcaatttaaataagtgatttt-cacatagatttaggtattttttttcttcgtg 39153239  T
Q  561 atttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||  | ||  || |||||| ||| ||||| || | ||||||||||||| |||||||    
T  39153238 atttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtcgcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaaa 39153141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 458 - 553
Target Start/End: Original strand, 17949132 - 17949226
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt 553  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||||||| |||||| | ||||||    
T  17949132 ttttgggtcaattattgacctgaaatcacccctcttcacctttttctctctatttcaatctaaataagcga-ttttcacatagatcttgatttttt 17949226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 458 - 658
Target Start/End: Complemental strand, 37566079 - 37565878
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttca-tctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttct 555  Q
    ||||||||||||| |||| |||||||||||| |||||| | ||||| |||||| |||||||||||||| ||| |||||||| |||| |||| ||||||||    
T  37566079 ttttgggtcaattattgatctgaaatcacccttcttcattttttttatctctatttcaatctaaataattga-ttttcacatagatttaggtttttttct 37565981  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | | |||||| ||| |  ||||||||||| |||| || |||||||| |||||  |  |||||||| || |  |  ||||| |||||||||||||||||||    
T  37565980 ttgagatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattg 37565881  T
Q  656 aaa 658  Q
    |||    
T  37565880 aaa 37565878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 12173381 - 12173455
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtg 527  Q
    |||| |||||||||||| ||||||||||||||||||| |||| |||||||| |||||| ||||||| |||||||||    
T  12173381 gggtggttttgggtcaacttttgacctgaaatcacccatctttatcttttt-tctctatttcaatcaaaataagtg 12173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 12417809 - 12417883
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtg 527  Q
    |||| |||||||||||| ||||||||||||||||||| |||| |||||||| |||||| ||||||| |||||||||    
T  12417809 gggtggttttgggtcaacttttgacctgaaatcacccatctttatcttttt-tctctatttcaatcaaaataagtg 12417883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 684
Target Start/End: Complemental strand, 23851538 - 23851466
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||    
T  23851538 tttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgga 23851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 17427396 - 17427319
Alignment:
Q  479 gaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||||| ||| || ||||||||||||||||| |||| | ||||||||||  |||||| | |||||||||||||||||||    
T  17427396 gaaatcccccatcatcatctttttctctctatttcagtgtaaataagtg-cttttcaaatagatctaggttttttcttc 17427319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 17431046 - 17430969
Alignment:
Q  479 gaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||||| ||| || |||||||| ||||||||  ||||||||||||||||  |||||| | |||||||||||||||||||    
T  17431046 gaaatcccccatcatcatctttctctctctatgtcaatctaaataagtg-cttttcagatagatctaggttttttcttc 17430969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 659
Target Start/End: Complemental strand, 24099390 - 24099283
Alignment:
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    |||||||||||||||||  | ||||| |  | ||||||||| |||||| | | | | ||  ||||||||| | | ||||||||||||||||||| |||||    
T  24099390 ttcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcat 24099291  T
Q  652 attgaaaa 659  Q
    ||||||||    
T  24099290 attgaaaa 24099283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 658
Target Start/End: Complemental strand, 29617382 - 29617303
Alignment:
Q  579 ggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||| ||||||||| |||||||| ||||| |   ||||||||| ||| |||||||||||||| |||| ||| ||||||||    
T  29617382 ggtgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaa 29617303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 658
Target Start/End: Original strand, 3673404 - 3673501
Alignment:
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||||||  |  |||| |||| ||||||||| ||||||||||||||||   |||||||||  || |||||||||||||| |||  ||| |||||||    
T  3673404 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtg---tttgatttcgtgtcttgttgcggtgttcctttagttcctattgaa 3673500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 532
Target Start/End: Original strand, 18733938 - 18733980
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgatttt 532  Q
    |||||||||||||||||||| |||||| ||||||| |||||||    
T  18733938 tcttcatctttttctctctatttcaatttaaataattgatttt 18733980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 531
Target Start/End: Complemental strand, 24853630 - 24853564
Alignment:
Q  465 tcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgattt 531  Q
    |||||| |||||| |||||||| | ||||| ||||||||| |||| || ||| ||||||||||||||    
T  24853630 tcaattattgacccgaaatcactcatcttcgtctttttctttctattttaatgtaaataagtgattt 24853564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 31013817 - 31013763
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||||    
T  31013817 gaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttc 31013763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 502
Target Start/End: Original strand, 23230494 - 23230539
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||| |||||||||||||||  ||||||||||||| |||||||||    
T  23230494 gttttaggtcaatttttgaccaaaaatcacccctctacatcttttt 23230539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 15889577 - 15889641
Alignment:
Q  594 gtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||||| ||||| ||  |||||||| || | | |||||| |||||||||||||||||||||||    
T  15889577 gtcgtcttgtgcggcgttgtttgattttccttctggttgcgatgttcatttgattcatattgaaa 15889641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 683
Target Start/End: Complemental strand, 43135600 - 43135552
Alignment:
Q  635 gtgttcatttgattcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    |||||||| ||||||||| |||| ||| |||||||||||||||| ||||    
T  43135600 gtgttcatctgattcatagtgaagatcgattattcaatcaaagatttgg 43135552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 9e-78; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 35965186 - 35964947
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  35965186 attgaggggtggttttgggtcaattttttacctgaaatcacctctcttcatctttttctctctatttcaatctgaataagtgatttttcacatagatcta 35965087  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| |||||| | || || ||  ||||||||||||| || ||| ||||||||||||    
T  35965086 ggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttg 35964987  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||||||| ||| ||| |||||||||||||||| |||||    
T  35964986 attcatattaaaagatcgattattcaatcaaagatttgga 35964947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 451 - 683
Target Start/End: Complemental strand, 10359752 - 10359520
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||  ||| | ||||||||||    
T  10359752 ggggtggttttgggtcaatttttgacctgaaatcacccaacttcatctttttctctctatttcgatctaaataagtgatttta-acatatatctaggttt 10359654  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    ||||||||||||||| ||| |  ||||||||||| ||||||| | |||||| ||||||||  ||||||||||||| || ||| |||||||||||||||||    
T  10359653 tttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattca 10359554  T
Q  651 tattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||| ||| |||||||||| ||||| ||||    
T  10359553 tattgaaagatcgattattcaataaaagatttgg 10359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 458 - 678
Target Start/End: Original strand, 12265345 - 12265565
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||||||||| ||| |    
T  12265345 tttttggtcaatttttgacctgaaatcacccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggttttctctac 12265444  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    ||||||| |||| | |||||||| ||| ||||||| |||||| | ||||| ||  ||||||||| ||||| |||| |||||||| |||||||||||||||    
T  12265445 gtgattttgtcatctgagtgtggcggtttgttgttcgtcgtc-tgtgcggcgttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaa 12265543  T
Q  658 a-atcaattattcaatcaaaga 678  Q
    | ||||||||||||||||||||    
T  12265544 agatcaattattcaatcaaaga 12265565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 446 - 674
Target Start/End: Complemental strand, 18139124 - 18138895
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  |||| ||| ||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||    
T  18139124 attgaggggtgattttaggtaaatttttgacctggaatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatcta 18139025  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||  |||||||| || | ||||||| |||||||||||    
T  18139024 ggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttg 18138925  T
Q  646 attcatattgaaa-atcaattattcaatca 674  Q
    |||  |||||||| ||| ||||||||||||    
T  18138924 atttctattgaaagatcgattattcaatca 18138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 446 - 674
Target Start/End: Complemental strand, 49126337 - 49126108
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  |||| ||| ||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||    
T  49126337 attgaggggtgattttaggtaaatttttgacctggaatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatcta 49126238  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||  |||||||| || | ||||||| |||||||||||    
T  49126237 ggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttg 49126138  T
Q  646 attcatattgaaa-atcaattattcaatca 674  Q
    |||  |||||||| ||| ||||||||||||    
T  49126137 atttctattgaaagatcgattattcaatca 49126108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 446 - 675
Target Start/End: Complemental strand, 10389964 - 10389735
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  10389964 attgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatcta 10389866  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||| |  ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| |||| || ||||||||||||||||    
T  10389865 ggttttttccttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttg 10389766  T
Q  646 attcatattgaaa-atcaattattcaatcaa 675  Q
    ||||||||||||| ||| |||||||||||||    
T  10389765 attcatattgaaatatcgattattcaatcaa 10389735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 4643734 - 4643974
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccc--tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatc 543  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||  |||| |||||    
T  4643734 attgaggggtggttttaggtgaatttttgacctgaaatcacccccctcttcatctttttctctctatttcaatctaaataagtgattt--cacatagatc 4643831  T
Q  544 taggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
    ||| ||||||  ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||    
T  4643832 tagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttca 4643931  T
Q  642 tttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||    
T  4643932 tttgattcatattgaaagatcgattattcaatcaaagatttgg 4643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 2624375 - 2624613
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatct 544  Q
    ||||||||||  ||||||||  |||||||||||||||| || | || |||||||||| |  |||| |||||||||||||||||||||| |||| ||||||    
T  2624375 attgaggggtgattttgggttgatttttgacctgaaataactcatcatcatctttttatagtctatttcaatctaaataagtgatttt-cacatagatct 2624473  T
Q  545 aggtttttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||||||||| ||||||||||||||||   |||||||||||||||||||| |||||||| ||||| ||  ||||||||||||| ||||||||||||| |||    
T  2624474 aggtttttttcttcgtgatttcgtcat--gagtgtggtggtgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatt 2624571  T
Q  644 tgattcatattgaa--aatcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||  | || |||||||||||||||||||||    
T  2624572 tgattcatattgaaagattcgattattcaatcaaagaattgg 2624613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 448 - 683
Target Start/End: Complemental strand, 9529087 - 9528850
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||||||| |||| || |    
T  9529087 tgaggggtggttttgggtcaattcttgacctgaaatcacccctctttatctttttctctttatttcaatctaaataagtga-ttttcacatagatttatg 9528989  T
Q  548 --ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
      ||||||||| |||||||| ||| |  |||||| |||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||| ||||||||||    
T  9528988 ttttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttg 9528889  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  9528888 attcatattgaaagatcgattattcaatcaaagatttgg 9528850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 446 - 676
Target Start/End: Original strand, 25273753 - 25273992
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctt-----tttctctctaattcaatctaaataagtgatttttcacacag 540  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||     |||||||||| |||||||||||||||||||||| |||| ||    
T  25273753 attgaggggtggttttggatcaattcttgacctgaaatcacccctcttcatcttcatcttttctctctatttcaatctaaataagtgatttt-cacatag 25273851  T
Q  541 atctaggtttttt----cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggt 636  Q
    |||||||||||||    ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||||||    
T  25273852 atctaggttttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggt 25273951  T
Q  637 gttcatttgattcatattgaaa-atcaattattcaatcaaa 676  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  25273952 gttcatttgattcatattgaaagatcgattattcaatcaaa 25273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 43444271 - 43444504
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||| | |||||    
T  43444271 attgaggggtagttttgggtcaatttttgatctgaaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatatatcta 43444369  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||| |||| |   ||||||||||||||    
T  43444370 ggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcattt 43444469  T
Q  645 gattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||||| ||| ||| ||||||||||||    
T  43444470 gattcatattgaaagatcgattgttcaatcaaaga 43444504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 446 - 658
Target Start/End: Original strand, 51317863 - 51318075
Alignment:
Q  446 attgaggggtagttttgggtcaatt-tttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    ||||||||||  ||||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  51317863 attgaggggtgattttgggtcaattctttgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatct 51317961  T
Q  545 aggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    ||||||||||||  ||||||| ||| |  ||||||||| | ||||||| |||||||| |||||  |  ||||||||||||| || |||||||||| ||||    
T  51317962 aggttttttctttttgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaattt 51318061  T
Q  645 gattcatattgaaa 658  Q
    ||||||||||||||    
T  51318062 gattcatattgaaa 51318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 868035 - 868279
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaa-------tctaaataagtgatttttcacac 538  Q
    |||||||||| ||||| |||| ||| ||||| |||||||||||||||||||||||||||||||| |||||       ||||||||||| ||||| ||||     
T  868035 attgaggggtggttttaggtcgattcttgacatgaaatcacccctcttcatctttttctctctatttcaaatttcaatctaaataagttatttt-cacat 868133  T
Q  539 agatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgt 638  Q
    |||||||| ||||| ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| || |||||||||    
T  868134 agatctagattttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgt 868232  T
Q  639 tcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||    
T  868233 tcatttgattcatattgaaagatcaattattcaatcaaagatttgga 868279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 459 - 683
Target Start/End: Complemental strand, 53616849 - 53616623
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--ttttttctt 556  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||| || |||||||||||||||||| |||||||| |||||||||  |||||||||    
T  53616849 tttgggtcaattcttgacctgaaatcaccactcttcatcgttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttttctt 53616751  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
     || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||||||||||||||||||||||||||    
T  53616750 tgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattga 53616651  T
Q  657 aa-atcaattattcaatcaaagaattgg 683  Q
    || ||||||| |||||||||||| ||||    
T  53616650 aagatcaattgttcaatcaaagatttgg 53616623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 9283789 - 9284027
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||  || ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||| |||||||    
T  9283789 attgaggggtggttttgggtcaatacttaacctgaaatcacccctcttcatcgttttctctttatttcaatctaaataagtgattttt-acatagatcta 9283887  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || |||||| || || ||||| ||| |  ||||||||| | |||||||||||||||| || || ||  ||||||||||||| ||  ||||||||||||||    
T  9283888 ggtttttttatttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcattt 9283987  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| ||| |||||||||||| ||||    
T  9283988 gattcatattgaaagatcgattgttcaatcaaagatttgg 9284027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 446 - 675
Target Start/End: Complemental strand, 34024647 - 34024419
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||    
T  34024647 attgaggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtta-ttttcacatagatcta 34024549  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||||| |  |  ||  |||||||| || | || ||||||||||| ||||    
T  34024548 ggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttg 34024450  T
Q  646 attcatattgaaa-atcaattattcaatcaa 675  Q
    ||||||||||||| ||| |||||||||||||    
T  34024449 attcatattgaaagatcgattattcaatcaa 34024419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 447 - 683
Target Start/End: Complemental strand, 31381881 - 31381645
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag 546  Q
    |||| |||| |||||||||||||| |||||||||||||||||||  ||||||||||||||||  |||||| ||||||||||| |||||||| |||||||     
T  31381881 ttgatgggtggttttgggtcaattcttgacctgaaatcaccccttctcatctttttctctctttttcaatttaaataagtga-ttttcacatagatctaa 31381783  T
Q  547 gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
    |||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||| | ||  |||||||| |||| ||  ||||||||| ||||||    
T  31381782 gttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttga 31381683  T
Q  647 ttcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||| ||| ||| |||||||||||||||| ||||    
T  31381682 ttcatattaaaagatcgattattcaatcaaagatttgg 31381645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 457 - 684
Target Start/End: Original strand, 56194488 - 56194718
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg---tttttt 553  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||||   ||||||    
T  56194488 gttttgggtcaattcttgacctgaaatcaaacctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggttttttttt 56194586  T
Q  554 cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatat 653  Q
    ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||||||||||||||| |||| |||    
T  56194587 ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctat 56194686  T
Q  654 tgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||| ||| |||||| ||||||||| |||||    
T  56194687 tgaaagatcgattatttaatcaaagatttgga 56194718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 676
Target Start/End: Original strand, 1531784 - 1532017
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttt-tctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  1531784 attgaggggtggtattgggtcaattcttgacctgaaatcacccctctttatcttttctctctctatttcaatctaaataagtga-ttttcacatagatct 1531882  T
Q  545 ag--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    ||   ||||||||| |||||||| ||| |  ||||||||||| |||||| ||||||||| || || ||  |||||||||| || ||  ||||||||| ||    
T  1531883 agattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtcttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttat 1531982  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||| |||||| ||||||||||||||||||    
T  1531983 ttgattcatgttgaaagatcaattattcaatcaaa 1532017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 656
Target Start/End: Complemental strand, 9645760 - 9645550
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||  ||||||| |||||||    
T  9645760 attgaggggtcgttttgggtcaattcttgacctgatatcacccctcttcatctttttgtctctatttcaatctaaataagtga-ctttcacatagatcta 9645662  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| | |||||| ||| |  ||||||||||||||||||| |||||||| ||||| ||  |||||||| ||||  |  |||| |||||||||    
T  9645661 ggtttttttctttgcgatttcatcatctaagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcattt 9645562  T
Q  645 gattcatattga 656  Q
    ||||||||||||    
T  9645561 gattcatattga 9645550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 38706921 - 38706683
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||| || ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||    
T  38706921 attgaggggtggttttgggtcaattcttgatctaaaatcacccttcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagattta 38706823  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||| | ||  ||| ||||||||| ||  ||||||||| ||||    
T  38706822 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaattt 38706723  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||| ||||||||| ||| ||||||||||| |||| ||||    
T  38706722 gatttatattgaaagatcgattattcaatcgaagatttgg 38706683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 458 - 675
Target Start/End: Original strand, 35261077 - 35261299
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatca----cccctcttcatctttttc-tctctaattcaatctaaataagtgatttttcacacagatctaggttttt 552  Q
    |||||||||||||||||||||||||| |    |||||||||||||||||| ||| || | |||||||||||||||||||| |||| |||| |||||||||    
T  35261077 ttttgggtcaatttttgacctgaaataatcatcccctcttcatctttttcctctttattgcaatctaaataagtgatttt-cacatagatttaggttttt 35261175  T
Q  553 tcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcata 652  Q
    ||||||||||||  ||| |  |||||||||||||||||||||||||||| ||||| ||  |||||||| |||| || |||||||||||||||||||||||    
T  35261176 tcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcata 35261275  T
Q  653 ttgaaa-atcaattattcaatcaa 675  Q
    || ||| ||||| |||||| ||||    
T  35261276 ttaaaagatcaactattcattcaa 35261299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 458 - 683
Target Start/End: Complemental strand, 46991329 - 46991103
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttt---tctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt- 553  Q
    |||||||||||||||||||   ||||||| | ||||||| ||||   |||||||| |||||||||||| ||||||||| |||| |||||||| ||||||     
T  46991329 ttttgggtcaatttttgac---aaatcactcatcttcatattttatttctctctatttcaatctaaatgagtgatttt-cacatagatctagattttttt 46991234  T
Q  554 cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatat 653  Q
    |||| |||||| |||| | ||||||||||||||||||||||||||||| || || ||  ||||||||||| | |||||||||||||||||||||||||||    
T  46991233 cttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgtcttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatat 46991134  T
Q  654 tgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| ||| |||||||||||||||| ||||    
T  46991133 tgaaatatcgattattcaatcaaagatttgg 46991103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 457 - 683
Target Start/End: Complemental strand, 37188792 - 37188568
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||||||| || |||||||||||||||||| |||||||| | ||||| ||||||||||    
T  37188792 gttttgggtcaattattgacctgaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatcta-gttttttctt 37188695  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
     |||||||| |||    ||||||||||| ||||||| ||||| || ||||| |   ||||||||||||  || ||||||||||||| |||||||| ||||    
T  37188694 tgtgatttcatcatttaagtgtggtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttga 37188595  T
Q  657 aaatcaattattcaatcaaagaattgg 683  Q
    | ||| |||||||||||||||| ||||    
T  37188594 agatcgattattcaatcaaagatttgg 37188568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 20569130 - 20569366
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||||||||||| || |||||||||||||||||||||| ||||||||| || |||||||||||||| ||||||| |||| |||||||    
T  20569130 attgatgggtggttttgggtcaattcttaacctgaaatcacccctcttcatttttttctctttatttcaatctaaataaatgatttt-cacatagatcta 20569228  T
Q  546 ggtttttt----cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
    ||||||||    |||  | ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||| |||| ||  |||||||||||    
T  20569229 ggttttttttttctttataatttcatcatctaagtgtggtgatttgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttca 20569328  T
Q  642 tttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  20569329 tttgattcatattgaaagatcgattattcaatcaaaga 20569366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 43154231 - 43153992
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||| ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  43154231 attgagaggtggttttgggtcaattcttgacttgaaatcacccctcttcatc-ttttctctctatttcaatctaaataagtga-ttttcacatagatcta 43154134  T
Q  546 g--------gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtg 637  Q
    |        |||||||||| |||||||  |||    ||||||||||| ||||||| |||||||| || || ||  ||||||||||||| ||  |||||||    
T  43154133 ggtttttttgttttttctttgtgattttatcatttaagtgtggtggtttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtg 43154034  T
Q  638 ttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  43154033 ttcatttgattcatattgaaagatcgattattcaatcaaaga 43153992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 451 - 657
Target Start/End: Original strand, 21090036 - 21090241
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| ||||||||||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||||||||||| |||||||| |||| |||||||    
T  21090036 ggggtggttttgggtcaatctttgatctgaaatcactcatcttcatctttttctctctatttcaatataaataagtga-ttttcacatagatttaggttt 21090134  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    ||||||||||||||| ||| |  | | ||||||| ||||||| |||||||| | ||  ||  ||||||||  ||| || |||||||||||||||||||||    
T  21090135 tttcttcgtgatttcatcatctaaatatggtggtttgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattca 21090234  T
Q  651 tattgaa 657  Q
    |||||||    
T  21090235 tattgaa 21090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 50766720 - 50766490
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct- 544  Q
    |||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||| || |||||||||||||| ||| |||||||| ||||||     
T  50766720 attgagaggtggttttgggtcaattcttgatctgaaatcatccctcttcatctttttctctttatttcaatctaaataaatga-ttttcacatagatcta 50766622  T
Q  545 aggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| || ||||| ||| |  ||||||||| | ||||||   ||||||| ||||| ||  ||||||||||||| ||  ||||||||||||||    
T  50766621 agtttttttctttgtaatttcatcatctaagtgtggtgatttgttgt---tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcattt 50766525  T
Q  645 gattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||||| ||| ||| ||||||||||||    
T  50766524 gattcatattgaaagatctattgttcaatcaaaga 50766490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 492 - 683
Target Start/End: Complemental strand, 52098084 - 52097889
Alignment:
Q  492 ttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggt---ggtgtgt 588  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| || ||| |||  |||| |||||||||||| |||| |||||||||||   |||||||    
T  52098084 ttcatccttttctccctatttcaatctaaataagtgatttttcgcatagaactaaattttctcttcgtgattttgtcatccgagtgtggtggtggtgtgt 52097985  T
Q  589 tgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||| ||||| ||| | ||  ||||||||||| |||| |||  |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  52097984 tgtttgttgtcttgtgcagagttgtttgatttcccctattcttgtagtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgg 52097889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 451 - 677
Target Start/End: Original strand, 6972692 - 6972920
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--t 548  Q
    ||||| |||||||||||||| |||| ||||||||||| |||||||||||||| ||| || |||||||||||||||||| |||| ||| ||||| | |  |    
T  6972692 ggggtggttttgggtcaattcttgatctgaaatcacctctcttcatctttttatctgtatttcaatctaaataagtgactttt-acatagatccatgttt 6972790  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    |||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| ||||| || || |||| |||||||||| |||    
T  6972791 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttatt 6972890  T
Q  649 catattgaaa-atcaattattcaatcaaag 677  Q
    | |||||||| ||| |||||||||||||||    
T  6972891 cctattgaaagatcgattattcaatcaaag 6972920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 490 - 678
Target Start/End: Complemental strand, 32952913 - 32952728
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgtt 589  Q
    |||||||||||||||||||| |||||  |||||||||| ||||||||| |||||||| ||||||||| |||||||||||| |  |||||| |||||||||    
T  32952913 tcttcatctttttctctctatttcaaattaaataagtg-tttttcacatagatctag-ttttttctttgtgatttcgtcatctaagtgtgttggtgtgtt 32952816  T
Q  590 gtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaaat-caattattcaatcaaaga 678  Q
    |||||||||||||||||| ||  ||||||||  | | ||||| |||||||||||| ||||||||||||||| | ||||||||||||||||    
T  32952815 gtttgtcgtcttatgcgg-gttgtttgattt-tcatcttgttacggtgttcatttaattcatattgaaaatacgattattcaatcaaaga 32952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 446 - 676
Target Start/End: Complemental strand, 2115799 - 2115568
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||||||   ||||||||||||||||| || |||||||||||||||||| |||||||| |||| ||    
T  2115799 attgaggggtggttttgggtcaattattgacctgaaatcacttttcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagattta 2115701  T
Q  546 gg--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  ||||||||| || ||||| ||| |  ||||||||| | |||||||||||||||| ||| ||||  ||||||||| | | ||  |||| | ||||||    
T  2115700 ggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgc-gtgttgtttgatttctcatcttcgtgcgatattcatt 2115602  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaa 676  Q
    | ||||||||||||| ||| ||| ||||||||||    
T  2115601 taattcatattgaaagatcgattgttcaatcaaa 2115568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 458 - 684
Target Start/End: Complemental strand, 27594036 - 27593799
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttt-----------tcacacagatctag 546  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||| || |||           ||||| |||||||     
T  27594036 ttttaggtcaatttttgacatgaaatcaccc-tcttcatctttttctctatatttcaatctaaataagcgagtttcacatagatcttcacatagatctat 27593938  T
Q  547 gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
     |||||||||||||||||||| | | |||||||||||||||||||| ||| |||| ||||   | |||||||||||||| || ||||| |||| |||| |    
T  27593937 attttttcttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtctttttgcgatgtttatttaa 27593838  T
Q  647 ttcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||||||| ||| |||||||||| ||||| |||||    
T  27593837 ttcatattgaaagatcgattattcaataaaagatttgga 27593799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 490 - 649
Target Start/End: Complemental strand, 8009526 - 8009369
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgtt 589  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||||||| |||||||| ||| |  ||||||||||| ||||    
T  8009526 tcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctag-ttttttctttgtgatttcatcatctaagtgtggtggtttgtt 8009429  T
Q  590 gtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||| |||||||| ||||| ||  ||||||||||||| ||  | |||||||||||||||||    
T  8009428 gttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattc 8009369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 3336302 - 3336129
Alignment:
Q  511 ttcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcgg-tg 609  Q
    ||||||||||| |||| ||||| ||||   |||||||||||||||||||||||| |||| | |||||||||||||||||||| |||||| | |||||  |    
T  3336302 ttcaatctaaacaagttatttt-cacatctatctaggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacg 3336204  T
Q  610 tcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |  |||||||| || | |||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||    
T  3336203 ttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagattgattattcaatcaaagatttgg 3336129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 683
Target Start/End: Original strand, 29965565 - 29965751
Alignment:
Q  499 ttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtc 596  Q
    |||||||| || |||||||||||||||||||||| |||| |||||||||||||||  ||| || ||||| ||| |  ||||||||| | ||||||| |||    
T  29965565 ttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc 29965663  T
Q  597 gtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| ||||| ||  ||||||||||||| ||  |||||||||||||||||||||||||||| ||  ||| |||||||||||| ||||    
T  29965664 gtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgg 29965751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 446 - 553
Target Start/End: Original strand, 47416762 - 47416868
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  47416762 attgaggggtgattttgggtcaattattgacttgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 47416860  T
Q  546 ggtttttt 553  Q
     |||||||    
T  47416861 agtttttt 47416868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 44947281 - 44947528
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctct-----tca-tctttttctctctaattcaatctaaataagtgatttttcacaca 539  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||||     ||  ||| | |||||||   ||||||||||||||||||||| | || |    
T  44947281 attgaggggtggttttgggtcaattcttgacctgaaatcacctctctctctctctctctctctctctctctctcaatctaaataagtgatttt-cgcata 44947379  T
Q  540 gatctaggtttttt----cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcgg 635  Q
    ||||||||||||||    ||| |||||||| | | |  ||||||||||| ||||| |||| ||||| ||||| ||  ||||||||||||| ||  || ||    
T  44947380 gatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgttggttgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgtgg 44947479  T
Q  636 tgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| ||||    
T  44947480 tgttcatttgattaatattgaaagatcgattattcaatcaaagatttgg 44947528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 494 - 678
Target Start/End: Original strand, 14183729 - 14183913
Alignment:
Q  494 catctttttctctctaattcaatctaaataagtgatttttcacacagatct-aggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtt 592  Q
    |||||||||||||||| |||||||||||||||||| ||||||||  ||||| || ||||||||| ||||||||  || |  ||||||||||| |||||||    
T  14183729 catctttttctctctatttcaatctaaataagtga-ttttcacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgtt 14183827  T
Q  593 tgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
     || ||||| ||| ||||  |||||||| | || ||  |||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  14183828 cgtagtcttgtgc-gtgttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatcgactattcaatcaaaga 14183913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 535
Target Start/End: Complemental strand, 5333658 - 5333581
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttca 535  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||||    
T  5333658 ttttgggtcaatttttgacctgaaatcacacatcttcatctttttctctctatttcaatataaataagtgatttttca 5333581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 451 - 533
Target Start/End: Complemental strand, 5333736 - 5333655
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgattttt 533  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  5333736 ggggtggttttgggtcaatttttgacatgaaatcaccc-tcttcatctttttctctctatttcaatataaataagtgattttt 5333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 577 - 683
Target Start/End: Original strand, 49410232 - 49410339
Alignment:
Q  577 gtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaa 675  Q
    |||||||| ||||||| |||||||| ||| | ||  ||||||||||||| ||  |||||||||||||||||||||||||||| ||| |||||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaa 49410331  T
Q  676 agaattgg 683  Q
    ||| ||||    
T  49410332 agatttgg 49410339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 563
Target Start/End: Original strand, 1008185 - 1008289
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||||| ||||| |||||| ||||||||| | ||| |||||||||||||||| || ||||||||||||||| |||||||| | || ||| ||||||||||    
T  1008185 ttttggatcaatatttgacttgaaatcactcatctgcatctttttctctctattttaatctaaataagtga-ttttcacataaatttagtttttttcttc 1008283  T
Q  558 gtgatt 563  Q
    ||||||    
T  1008284 gtgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 576 - 683
Target Start/End: Original strand, 47417670 - 47417778
Alignment:
Q  576 tgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatca 674  Q
    ||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||||||||||||||||||| ||| ||| ||||||||    
T  47417670 tgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatca 47417769  T
Q  675 aagaattgg 683  Q
    |||| ||||    
T  47417770 aagatttgg 47417778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 446 - 650
Target Start/End: Complemental strand, 1931914 - 1931723
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||| ||| |||| |||||||| ||| |||||||||||| | |||||||||||||||||            |||||||| ||||| |||| |||||||    
T  1931914 attgagaggtggtttcgggtcaatatttaacctgaaatcactcatcttcatctttttctct------------aaataagttatttt-cacaaagatcta 1931828  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||| | |||||||| ||| |  ||||| |||||||||||||   |||||| | ||   |  ||| ||||||||| |||||||||||||||||||    
T  1931827 ggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgtttcatttcccgtcttgttgcggtgttcatttg 1931728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 560 - 658
Target Start/End: Original strand, 18048863 - 18048961
Alignment:
Q  560 gatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||||||| |||| || |||| |||||||||||||||||| || || ||  ||||||||  ||  |||||||||||||| |||||||||||||||||    
T  18048863 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaa 18048961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 451 - 675
Target Start/End: Complemental strand, 41255585 - 41255361
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-tt 549  Q
    ||||| |||||||||||||||||||||| |||||| |  |||||||||||||||  || ||| | ||| || | |||| |||||||| | || |||| ||    
T  41255585 ggggttgttttgggtcaatttttgacctaaaatcatcaatcttcatctttttctacct-atttactcttaacacgtga-ttttcacataaatttaggttt 41255488  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    |||| ||||||||||||||  |  ||| | ||| | |||||||||| ||||| ||||  ||  ||| ||||||||| || |||||  |||||||||||||    
T  41255487 ttttattcgtgatttcgtcgactaagtatagtgttatgttgtttgttgtcttgtgcgacgttatttaatttcccgtcttcttgcgacgttcatttgattc 41255388  T
Q  650 atattgaaa-atcaattattcaatcaa 675  Q
    ||| ||||| ||||  |||||||||||    
T  41255387 atactgaaagatcagatattcaatcaa 41255361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 565
Target Start/End: Complemental strand, 35351345 - 35351253
Alignment:
Q  472 ttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttc 565  Q
    |||||| |||||||| | |||||||| ||||| || || |||||| |||||||||||| || |||| ||||||||||||||||| |||||||||    
T  35351345 ttgaccagaaatcacacatcttcatccttttcgctttatttcaatttaaataagtgatatt-cacatagatctaggttttttctacgtgatttc 35351253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 553
Target Start/End: Original strand, 49680456 - 49680521
Alignment:
Q  487 ccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt 553  Q
    |||||||||||||||||||| || ||||||| |||||||||| ||||||||  ||||||||||||||    
T  49680456 ccctcttcatctttttctctttatttcaatccaaataagtga-ttttcacatggatctaggtttttt 49680521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 659
Target Start/End: Complemental strand, 36204526 - 36204414
Alignment:
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggt-gtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
    |||||||||||||||||||||  |  |||| || | ||||||||| |||||| | | |||  ||  ||||||||| | |||||||||||||||||||||     
T  36204526 ttttttcttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttgg 36204427  T
Q  647 ttcatattgaaaa 659  Q
    |||||||||||||    
T  36204426 ttcatattgaaaa 36204414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 533
Target Start/End: Original strand, 23100617 - 23100652
Alignment:
Q  498 tttttctctctaattcaatctaaataagtgattttt 533  Q
    ||||||||||||||||||||||||||||||||||||    
T  23100617 tttttctctctaattcaatctaaataagtgattttt 23100652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 629 - 675
Target Start/End: Original strand, 23100740 - 23100787
Alignment:
Q  629 gttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaa 675  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23100740 gttgtggtgttcatttgattcatattgaaagatcaattattcaatcaa 23100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 3338874 - 3338816
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttct 504  Q
    |||||| ||| |||||||||||||||||||||| |||||| |  |||||||||||||||    
T  3338874 attgagaggtggttttgggtcaatttttgacctaaaatcatcaatcttcatctttttct 3338816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 584 - 658
Target Start/End: Original strand, 43853446 - 43853520
Alignment:
Q  584 tgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||||||  || |||| ||||| ||  ||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  43853446 tgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaa 43853520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 658
Target Start/End: Complemental strand, 51888351 - 51888242
Alignment:
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    ||||| |||||||||||||   | ||||| || | |||||||||  ||||||||||||  ||  ||||||||| | | |||||||||||||| |||| ||    
T  51888351 ttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggtt 51888252  T
Q  649 catattgaaa 658  Q
    ||||||||||    
T  51888251 catattgaaa 51888242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 648
Target Start/End: Complemental strand, 21554995 - 21554817
Alignment:
Q  470 ttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtca 569  Q
    |||| |||||||||||| | |||| |||||||| | | || |||| || |||||||||| |||||||| | |||||| | ||||||| ||||||||||      
T  21554995 tttttacctgaaatcacgcatcttaatctttttatatttatttcattcgaaataagtga-ttttcacataaatctagatattttctttgtgatttcgttg 21554897  T
Q  570 cccgagtgtggtggtgtgttgtttgtcgtctta-tgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
     | ||||| ||||  |||||||| ||| ||||| ||| |  |  ||||||||| ||| |||||| | |||||||||||||    
T  21554896 tctgagtgaggtgacgtgttgttcgtcatcttagtgccgcattgtttgatttctcgtcttgttgtgatgttcatttgatt 21554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 492
Target Start/End: Original strand, 23926030 - 23926073
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctct 492  Q
    ||||||||||||||||||| ||||||| || |||||||||||||    
T  23926030 gaggggtagttttgggtcattttttgatctcaaatcacccctct 23926073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 574 - 683
Target Start/End: Complemental strand, 45228124 - 45228014
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| ||||||| | |||||| |||||| |  ||| ||||||||| ||  | || | ||||||||||| | ||||||| ||| ||||||||||    
T  45228124 agtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtcttcgtacgatattcatttgatttacattgaaagatcgattattcaat 45228025  T
Q  673 caaagaattgg 683  Q
    |||||| ||||    
T  45228024 caaagatttgg 45228014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 53810889 - 53810943
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||||    
T  53810889 gaggggtggttttaggtcattttttgacctataatcacccctctacatctttttc 53810943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 2520638 - 2520691
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  2520638 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 2520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Complemental strand, 4143002 - 4142949
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  4143002 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 4142949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 50179649 - 50179698
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttca 495  Q
    |||||||||| |||||||||||||| || |||||||||||| | ||||||    
T  50179649 attgaggggtggttttgggtcaattcttaacctgaaatcactcatcttca 50179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 1e-76; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 459 - 684
Target Start/End: Original strand, 15570791 - 15571015
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcg 558  Q
    |||| |||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||  |||||||||||| |||| ||||||||||||| |    
T  15570791 tttgagtcagtttttgacttgaaatcatccctcttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttg 15570890  T
Q  559 tgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||||||||||     
T  15570891 tgatttcgtcacccgagtgtggtggtgtgttgttcgtcgtcttatgcggtgttgtttga-ttcccatattgttgtggtgttcatttgattcatattgaag 15570989  T
Q  659 atcaattattcaatcaaagaattgga 684  Q
    ||| |||||||||||||| |||||||    
T  15570990 atctattattcaatcaaataattgga 15571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 452 - 678
Target Start/End: Complemental strand, 27267065 - 27266837
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--tt 549  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||  ||    
T  27267065 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttt 27266967  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| |||||     ||||||||||||| ||  |||||||||||||||||||    
T  27266966 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattc 27266867  T
Q  650 atattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||| ||| ||||||||||||||||    
T  27266866 atattgaaagatcgattattcaatcaaaga 27266837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 28235454 - 28235686
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||| |||||||    
T  28235454 attgaggggtggttttgggtcaatcattgacctgaaatcacccctcttcatctttttctttctatttcgatctaaataagtga-ttttcacatagatcta 28235552  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | ||||||||| |||||||| ||| |  |||||| |||| |||||| ||||||||| ||||| ||  |||||||| || | || |||||||||||||||     
T  28235553 gattttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgtcgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttcatttt 28235652  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||| |||||||| ||||| ||||||||||||||    
T  28235653 attcttattgaaagatcaagtattcaatcaaaga 28235686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 457 - 683
Target Start/End: Complemental strand, 21060481 - 21060256
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||||| || |||||||||||||||||| |||||||| |||| |||||||||||||    
T  21060481 gttttgggtcaattcttgatctgaaatcaccactcttcatctttttctctatatttcaatctaaataagtga-ttttcacatagatgtaggttttttctt 21060383  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
    |||||| || ||| |  ||||||||||| ||||||| |||||||| |||||    |||||||||||||| || |||| |||||||| | |||||| ||||    
T  21060382 cgtgatgtcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttcatctaattcattttga 21060283  T
Q  657 aaatcaattattcaatcaaagaattgg 683  Q
    | ||| |||||||||||||||| ||||    
T  21060282 agatcgattattcaatcaaagatttgg 21060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 30371593 - 30371833
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  30371593 attgaggggtggttttgggtcaatatttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 30371691  T
Q  546 gg--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  ||||||||| || ||||| ||| |  ||||||||| | ||||||| ||| |||| ||||| ||  ||||||||||| | ||  |||||||||||||    
T  30371692 ggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatt 30371791  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    | ||||||||||||| ||| ||| |||||||||||| |||||    
T  30371792 taattcatattgaaagatcgattgttcaatcaaagatttgga 30371833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 458 - 683
Target Start/End: Complemental strand, 43262016 - 43261792
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||| ||||||| || |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||  |||     
T  43262016 ttttgagtcaattcttaacctgaaatcacccatcttcatctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttc-cttt 43261919  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg-a 656  Q
    |||||||  ||| |  ||||||||||| ||||||| |||||||||||||||||  |||||||| |||| || |||||||||| ||||||||||||||| |    
T  43261918 gtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 43261819  T
Q  657 aaatcaattattcaatcaaagaattgg 683  Q
    ||||| |||||||||||||||| ||||    
T  43261818 aaatcgattattcaatcaaagatttgg 43261792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 457 - 684
Target Start/End: Complemental strand, 7150535 - 7150307
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct-aggttttttct 555  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||| || ||||||||    
T  7150535 gttttggattaatttttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaagtttttttct 7150437  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | ||| |||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||||||||||||||| ||||  ||||    
T  7150436 ttgtgctttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattg 7150337  T
Q  656 aaa-atcaattattcaatcaaagaattgga 684  Q
    ||| |||||||||||||||||||| |||||    
T  7150336 aaagatcaattattcaatcaaagatttgga 7150307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 19281155 - 19280917
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||    
T  19281155 attggggggtggttttgggtaaatttttgaccggaaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ctttcacacatatcta 19281057  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||| | ||  |||| ||| || | || |||| ||||||||||     
T  19281056 ggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcatttt 19280957  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||| |||||||| ||| |||||||||||||||| |||||    
T  19280956 attcctattgaaagatcgattattcaatcaaagatttgga 19280917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 34881579 - 34881824
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||| |||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||    
T  34881579 attgaggggtggttctgggtcaattcttgacctgaaatcacctctcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatagatcta 34881676  T
Q  546 ggttttttcttc---------gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggt 636  Q
    | |||||||||          |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||||||    
T  34881677 gtttttttcttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggt 34881776  T
Q  637 gttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  34881777 gttcatttgattcatattgaaagatcaattattcaatcaaagatttgg 34881824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 16981159 - 16981396
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| || |||| |||||| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||| ||| |||| | |||||    
T  16981159 attgaggggtggtattggatcaattcttgacctgaaatcactcctcttcatatttttctctctatttcaatctaaataagtga-tttacacatatatcta 16981257  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||||| |||||||| ||| |  |||| |||||| ||||||| |||||||| |||||  |  ||| |||| |||| || ||||||||||| ||||    
T  16981258 ggttttttctttgtgatttcatcatctaagtgcggtggtttgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttg 16981357  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  16981358 attcatattgaaagatcgattattcaatcaaagatttgg 16981396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 447 - 683
Target Start/End: Complemental strand, 19260020 - 19259785
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag 546  Q
    ||||||||| |||||||||||||| ||||||||||||||||||  |   |||||||||||||| ||||||||||||||||||||||||||| |||||||     
T  19260020 ttgaggggtggttttgggtcaattcttgacctgaaatcaccccaat---tctttttctctctatttcaatctaaataagtgatttttcacatagatctaa 19259924  T
Q  547 g--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |  ||||||||  |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  ||||| ||||||| ||  ||||||||| ||||    
T  19259923 gttttttttctctgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttga-ttcccgtcttcgtgcggtgtttattt 19259825  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| |||||||||||||||| ||||    
T  19259824 gattcatattgaaagatcgattattcaatcaaagatttgg 19259785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 36344700 - 36344464
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||| ||| ||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||  ||||||    
T  36344700 attgaggggtggttttgagtcgattcttgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagtta-ttttcacatggatcta 36344602  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
     |||||||||| |||||||  ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| |||| || ||||||||||||||||    
T  36344601 agttttttctttgtgattt-atcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttg 36344503  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| || |||| |||||||||||| ||||    
T  36344502 attcatattgaaagattaatttttcaatcaaagagttgg 36344464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 452 - 676
Target Start/End: Original strand, 781264 - 781487
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||| | ||||||||| |||    
T  781264 gggtggttttggttcaattcttgacctgaaatcacccatcttcatctttttctctatatttcaatctaaataagtga-ttttcagatagatctagggttt 781362  T
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    ||||| |||||||| ||| |  ||| ||||||| ||||||| |||||| | |||||     ||||||||||||| || ||||||||||||| ||||||||    
T  781363 ttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcat 781462  T
Q  652 attgaaaatcaattattcaatcaaa 676  Q
     ||||| ||||||||||||||||||    
T  781463 tttgaagatcaattattcaatcaaa 781487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 472 - 678
Target Start/End: Complemental strand, 2058023 - 2057816
Alignment:
Q  472 ttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttcttcgtgatttcgtcac 570  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||  ||||||| |||     
T  2058023 ttgacctaaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttatgatttcatcat 2057925  T
Q  571 ccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattc 669  Q
    |  ||||||||||| ||||||| ||||||||  |||| ||  ||||||||||||| ||  |||||||||||||||||||||||||||| ||| |||||||    
T  2057924 ctaagtgtggtggtttgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattc 2057825  T
Q  670 aatcaaaga 678  Q
    |||||||||    
T  2057824 aatcaaaga 2057816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 681
Target Start/End: Complemental strand, 18677677 - 18677440
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||    
T  18677677 attgaggggtggttttgggtcaattattgatctgaaatcatccctcttcatctttttctctctattttaatctaaataagtga-ttttcacatagatcta 18677579  T
Q  546 gg--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| || |  ||  |||||||| |||| ||  | |||||||||||    
T  18677578 ggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatt 18677479  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaatt 681  Q
    ||||||||||||||| ||| |||||| ||||||| ||||    
T  18677478 tgattcatattgaaagatcgattatttaatcaaataatt 18677440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 35475547 - 35475311
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  |||||||| |||| |||| ||||||||||| ||||||||||| || ||| || |||||||||||||||||||||| |||| |||||||    
T  35475547 attgaggggtgattttgggttaattcttgatctgaaatcacctctcttcatcttgttatctatatttcaatctaaataagtgatttt-cacatagatcta 35475449  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | ||||||||| |||||||| |||     |||||||||| ||||||| ||||| |||||||| |   ||||||||| ||| || ||||||||||||||||    
T  35475448 gattttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgctgtttgatttctcgtcttcttgcggtgttcatttg 35475349  T
Q  646 attcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    ||||||||| || ||| |||||||||||||||| ||||    
T  35475348 attcatattaaagatcgattattcaatcaaagatttgg 35475311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 449 - 678
Target Start/End: Complemental strand, 20257902 - 20257673
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg- 547  Q
    ||||||||||||| ||||||||||||||||||||||| || ||| | |||||||||||||| |||||||||||||||||| |||||||| |||||||||     
T  20257902 gaggggtagtttttggtcaatttttgacctgaaatcatccatctacttctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggt 20257804  T
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    |||||||||| | |||| | || | ||||||||  | |||||||| |||||||| ||||   | | ||||||| |||| |||||||||||||||||||||    
T  20257803 ttttttcttcattattttgccatctgagtgtggcagcgtgttgttcgtcgtcttgtgcgacat-tattgattttccgtcttgttgcggtgttcatttgat 20257705  T
Q  648 tcatattgaa-aatcaattattcaatcaaaga 678  Q
    ||||||||||  ||| ||||||||||||||||    
T  20257704 tcatattgaagtatcgattattcaatcaaaga 20257673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 7246827 - 7247060
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  7246827 attggggggtggttttgggtcaattcttaacctgaaaccacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatcta 7246925  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||  ||||| || || |||||||||||||||    
T  7246926 ggtttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttcattt 7247025  T
Q  645 gattcatattga-aaatcaattattcaatcaaaga 678  Q
     |||| |||||| | ||| ||||| ||||||||||    
T  7247026 tattcctattgatagatcgattatacaatcaaaga 7247060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 457 - 672
Target Start/End: Complemental strand, 7613265 - 7613042
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctt---------tttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    ||||||||||||||||| | |||||||||||| ||||||||||         |||||||||  ||||||||||||||||| ||||||| | |||||||||    
T  7613265 gttttgggtcaattttttatctgaaatcacccatcttcatcttcgtcatccttttctctctgtttcaatctaaataagtg-tttttcatatagatctagg 7613167  T
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||| |||| |||||| |||| | |||||||||||||||||||| |||||||| |||  |||  ||||||||| ||| |||||||||||||||||||||    
T  7613166 ttttt-cttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgat 7613068  T
Q  648 tcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| ||| ||||||||||    
T  7613067 tcatattgaaagatcgattattcaat 7613042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 490 - 678
Target Start/End: Original strand, 42886392 - 42886579
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgtt 589  Q
    |||||||| ||||||||||| ||||||| ||||||||| |||| |||| |||| |||||||| ||||||||||||| ||| | |||||||||||||||||    
T  42886392 tcttcatccttttctctctatttcaatcaaaataagtgctttt-cacatagatttaggtttt-tcttcgtgatttcatcatctgagtgtggtggtgtgtt 42886489  T
Q  590 gtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||| |||||||| ||||| ||  ||||||||||||  ||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  42886490 gttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatcgattattcaatcaaaga 42886579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 7241651 - 7241884
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  7241651 attggggggtggttttgggtcaattcttaacctgaaaccacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatcta 7241749  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  | ||||||| | ||||||| |||||||| ||||| ||  |||  ||||| || || |||||||||||||||    
T  7241750 ggtttttttctttgtgatttcatcatctaattgtggtgatttgttgttcgtcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttcattt 7241849  T
Q  645 gattcatattga-aaatcaattattcaatcaaaga 678  Q
     |||| |||||| | ||| ||||| ||||||||||    
T  7241850 tattcctattgatagatcgattatacaatcaaaga 7241884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 27751783 - 27752026
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacc-cctcttcatctttttct-----------ctctaattcaatctaaataagtgattttt 533  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| |           || || |||||| |||||||||||||||     
T  27751783 attgaggggtggttttgggtcaattcttgacctgaaatcacctcctcttcatcttttttttttctttctttctatatttcaatataaataagtgatttt- 27751881  T
Q  534 cacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgc 633  Q
    |||| |||||||||||||||||| |||||||| ||| |  ||||||||||| ||||||| |||| ||| || || |   ||||||||||||| || ||||    
T  27751882 cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgccttttggggcgctatttgatttcccgtcttcttgc 27751981  T
Q  634 ggtgttcatttgattcatattgaaaatcaattattcaatcaaaga 678  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||||    
T  27751982 ggtgttcatttgattcatattgaatattgattattcgatcaaaga 27752026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 683
Target Start/End: Original strand, 26578129 - 26578358
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    ||||| |||||||| ||||||||||||||| | ||||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||| ||    
T  26578129 gtttttggtcaattcttgacctgaaatcactcatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttt 26578227  T
Q  557 c---gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatat 653  Q
    |   || ||||| ||| |  | ||| ||| | ||||||| |||||||| ||||  ||  ||||||||||||| ||  ||| |||||||||||||||||||    
T  26578228 ctttgtaatttcatcatctaaatgtagtgatttgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatat 26578327  T
Q  654 tgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| ||| ||| |||||||||||| ||||    
T  26578328 tgaaagatcgattgttcaatcaaagatttgg 26578358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 683
Target Start/End: Original strand, 30298130 - 30298313
Alignment:
Q  499 ttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgt 598  Q
    |||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||    
T  30298130 ttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgt 30298228  T
Q  599 cttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    ||| ||||| |   |||||||| |||| || |||||||||| ||||||||||||||||| ||  |||||||||||||||| ||||    
T  30298229 cttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaagattgattattcaatcaaagatttgg 30298313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 470 - 683
Target Start/End: Complemental strand, 27576537 - 27576323
Alignment:
Q  470 ttttgacctgaaatcacccct-cttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtc 568  Q
    ||||||||||||||| || || ||||||| ||||||||||| |||||| |||||||||||| || |||| |||||||| ||||||||| |||||||||||    
T  27576537 ttttgacctgaaatcgcctcttcttcatccttttctctctatttcaatgtaaataagtgatatt-cacatagatctagattttttctttgtgatttcgtc 27576439  T
Q  569 acccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattat 667  Q
    |   |||||||||||| |||||||  ||  ||| ||||  ||  ||||||||||||| ||||||||||||||||||  || ||||||||| ||| |||||    
T  27576438 atatgagtgtggtggtatgttgttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatcgattat 27576339  T
Q  668 tcaatcaaagaattgg 683  Q
    ||||||||||| ||||    
T  27576338 tcaatcaaagatttgg 27576323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 446 - 553
Target Start/End: Original strand, 10649322 - 10649428
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  10649322 attgaggggtgattttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 10649420  T
Q  546 ggtttttt 553  Q
    ||||||||    
T  10649421 ggtttttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 449 - 678
Target Start/End: Complemental strand, 7887145 - 7886916
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggt 548  Q
    ||||||| |||||||||| ||| |||||||||||||| |||||||| |||||| ||||||| || ||||||||||||||| |||||||| | ||||| ||    
T  7887145 gaggggtggttttgggtccattcttgacctgaaatcatccctcttcgtcttttcctctctattttaatctaaataagtga-ttttcacataaatctatgt 7887047  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    ||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||||| | |    |  |||||||| |||| || ||||||||||  | |||||    
T  7887046 tttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgatt 7886947  T
Q  649 catattgaaa-atcaattattcaatcaaaga 678  Q
    |||||| ||| ||| ||||||||||||||||    
T  7886946 catattaaaagatcgattattcaatcaaaga 7886916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 457 - 601
Target Start/End: Original strand, 11767687 - 11767832
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta-ggttttttct 555  Q
    ||||| |||||||||||||||| |||||| |  ||||||||||||||||| || ||||||||||||||||||||||||||  |||| || | ||||||||    
T  11767687 gttttaggtcaatttttgacctaaaatcatctgtcttcatctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttttct 11767786  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtctt 601  Q
    ||||||| ||| || | |||||||||||||||||||| ||||||||    
T  11767787 tcgtgatgtcgccatctgagtgtggtggtgtgttgttcgtcgtctt 11767832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 458 - 683
Target Start/End: Complemental strand, 41184643 - 41184413
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt---- 553  Q
    ||||||||||||||||||| ||||||||||  |||||||||||| ||||||| ||||||||||||||     |||||||| |||||||||||||||        
T  41184643 ttttgggtcaatttttgacatgaaatcaccattcttcatctttt-ctctctatttcaatctaaataa-----ttttcacatagatctaggtttttttttg 41184550  T
Q  554 ------cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
          ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  || ||||||| ||||||    
T  41184549 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgat 41184450  T
Q  648 tcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||| ||| |||||||||||||||| ||||    
T  41184449 tcatattgaaagatcgattattcaatcaaagatttgg 41184413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 458 - 684
Target Start/End: Complemental strand, 3271606 - 3271374
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag-------gttt 550  Q
    |||| |||||||| ||||| ||||||||| |||||||||||||| ||||||  |||||||||||||||||||||| |||| || ||||        ||||    
T  3271606 ttttaggtcaattcttgacatgaaatcactcctcttcatctttt-ctctctgtttcaatctaaataagtgatttt-cacataggtctaatttttttgttt 3271509  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    |||||| |||||||| ||| |  ||||||||||| |||| || |||||||| ||| | ||  |||||||| |||| ||  ||||||||||||||||||||    
T  3271508 tttctttgtgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattca 3271409  T
Q  651 tattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||| ||| |||||| ||||||||| |||||    
T  3271408 tattgaaagatccattatttaatcaaagatttgga 3271374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 450 - 601
Target Start/End: Original strand, 11192240 - 11192390
Alignment:
Q  450 aggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtt 549  Q
    |||||| |||||||||||||||||||||||||||||||  | || |||||||| ||||||  |||| |||||||||||| ||||||| |||||||| |||    
T  11192240 aggggtggttttgggtcaatttttgacctgaaatcacctatattaatctttttgtctctatatcaa-ctaaataagtga-ttttcacgcagatctaagtt 11192337  T
Q  550 tttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtctt 601  Q
    |||| |||||||| ||||||    |||||||||| ||||||||||||||||||    
T  11192338 ttttccttcgtgagttcgtcgtttgagtgtggtgttgtgttgtttgtcgtctt 11192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 6445805 - 6445923
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||| |||||||||| || | ||||||||| |||||||| |||||||||||  | ||| |||||||||||||||| ||| |||||||    
T  6445805 attgaggggtggttttgagtcaatttttaacttaaaatcacccatcttcatcgttttctctctatcttaatttaaataagtgattttt-acatagatcta 6445903  T
Q  546 ggttttttcttcgtgatttc 565  Q
    ||||||||||||||||||||    
T  6445904 ggttttttcttcgtgatttc 6445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 42579746 - 42579994
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttca---tctttttctctctaattcaatctaaataagtgatttttcacacagat 542  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||| ||||   | ||||||| |||| |||||||||||||||||| |||||||| ||||    
T  42579746 attgaggggtggttttgggtcaattattgacatgaaatcaccccttttcattttttttttctttctatttcaatctaaataagtga-ttttcacatagat 42579844  T
Q  543 ctag--------gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcg 634  Q
     |||        |||||||||| |||||||| ||| |  ||||||||| | ||||||| |||||||| ||||  ||  |||||||| | || ||  |||     
T  42579845 ttaggtttttttgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgca 42579944  T
Q  635 gtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||| ||||||||| ||| ||| |||||||||||||||| ||||    
T  42579945 gtgttcattttattcatatttaaagatcgattattcaatcaaagatttgg 42579994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 457 - 671
Target Start/End: Original strand, 43148610 - 43148825
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag-gttttttct 555  Q
    |||||||||||||| ||||| | |||| |  | | |||||| ||||||||||| ||| ||||||||||||||  ||||||| | || |||  ||||||||    
T  43148610 gttttgggtcaattcttgacttaaaattattcattttcatccttttctctctatttcgatctaaataagtga-ctttcacatatatttagatttttttct 43148708  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  |||| |||||||| || ||||| ||||||||| |||| |||||    
T  43148709 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattg 43148808  T
Q  656 aaa-atcaattattcaa 671  Q
    ||| ||| |||||||||    
T  43148809 aaagatcgattattcaa 43148825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 567
Target Start/End: Original strand, 28097027 - 28097142
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtt- 549  Q
    ||||| |||||| |||||||||||||||||| |||||| |||||||| ||||| ||| | |||||| ||||||||||| |||||||| | || ||||||     
T  28097027 ggggtggttttgtgtcaatttttgacctgaattcacccatcttcatc-ttttcgctcaatttcaatataaataagtga-ttttcacataaatttaggtta 28097124  T
Q  550 ttttcttcgtgatttcgt 567  Q
    |||||||| |||||||||    
T  28097125 ttttcttcatgatttcgt 28097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 14211082 - 14211156
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttt 532  Q
    |||| ||||||||||||||||  |||||||||||| |||||||||| || |  ||||||||||||||||||||||    
T  14211082 ttttaggtcaatttttgacctagaatcacccctctgcatctttttccctttctttcaatctaaataagtgatttt 14211156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 532
Target Start/End: Complemental strand, 2979560 - 2979475
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt--ctctctaattcaatctaaataagtgatttt 532  Q
    |||||||  |||| ||||||||||||||||  |||||||||||| |||||||||  |||| |  ||||||||||||||||||||||    
T  2979560 gaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatctaaataagtgatttt 2979475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 651
Target Start/End: Complemental strand, 19983556 - 19983361
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatcttttt-ctctctaattcaa-tctaaataagtgatttttcacacagatctaggttt--tttc 554  Q
    ||||||||| |||||||| |||||||||| ||||| || ||||| || |||| ||||| |||||||| ||||||||  ||| |||| |||| ||  ||||    
T  19983556 tttgggtcactttttgacttgaaatcaccactctttattttttttctttctatttcaaatctaaatacgtgattttg-acatagatttagggttattttc 19983458  T
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    || ||||||||||||   |||||||| | ||||||||| |||| ||| ||||| ||  || | |||  ||| |||||| |||||||||||| |||||    
T  19983457 tttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgttgttagttttttcgtcttgttgtggtgttcatttgcttcat 19983361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 41418743 - 41418694
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatca-cccctcttcatctttttctc 505  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  41418743 gttttgggacaatttttgacctgaaatcaccccctcttcatctttttctc 41418694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 565
Target Start/End: Original strand, 42432803 - 42432887
Alignment:
Q  480 aaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttc 565  Q
    |||||||| ||||| || |||||||||||| ||||||||||| ||||||  ||||| | |||| ||||||||||||| ||||||||    
T  42432803 aaatcacctctctttatatttttctctctatttcaatctaaaaaagtga-atttcatatagatttaggttttttctttgtgatttc 42432887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 683
Target Start/End: Complemental strand, 22978964 - 22978896
Alignment:
Q  616 gatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |  ||||||| ||||||||| ||||    
T  22978964 gattttccgttttgttgcggtgttcatttgattcatattgaaagaaaaattattaaatcaaagatttgg 22978896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 618 - 684
Target Start/End: Original strand, 4954032 - 4954099
Alignment:
Q  618 tttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||| || ||||||||||||||| |||| |||||||| ||| |||||||||||||||| |||||    
T  4954032 tttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttgga 4954099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 584 - 658
Target Start/End: Complemental strand, 10332653 - 10332579
Alignment:
Q  584 tgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||||||||||||||| |||||  |  ||||||||| ||| ||||||| |||||  |||||||||||||||||    
T  10332653 tgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaa 10332579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 503
Target Start/End: Original strand, 33029730 - 33029776
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||    
T  33029730 gttttgggtcaatttttgactcgaaatcacccgtcttcatctttttc 33029776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 505
Target Start/End: Complemental strand, 31392005 - 31391949
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc 505  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||||||    
T  31392005 gaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctc 31391949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 659
Target Start/End: Original strand, 16758523 - 16758598
Alignment:
Q  584 tgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaaa 659  Q
    |||||||||| ||||| | |||||| |  ||||||||| ||| ||||| |||||||| |||| |||||||||||||    
T  16758523 tgtgttgtttatcgtcgtgtgcggtcttatttgatttcgcgttttgttacggtgttcgtttggttcatattgaaaa 16758598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 38007198 - 38007252
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||||    
T  38007198 gaggggtggttttaggtcattttttgacctcgaatcacccctctacatctttttc 38007252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 675
Target Start/End: Original strand, 42432934 - 42432996
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaaatcaattattcaatcaa 675  Q
    |||||| | |||| ||||| | || |||||||||||| ||||||| |||||||||||||||||    
T  42432934 tttgatattccgtcttgttcctgtattcatttgattcttattgaagatcaattattcaatcaa 42432996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 10148698 - 10148766
Alignment:
Q  477 ctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag 546  Q
    ||||||||| |||||||||| |||||||  | | || ||||||||||||||| |||||||| ||||||||    
T  10148698 ctgaaatcaaccctcttcatatttttcttcccattttaatctaaataagtga-ttttcacatagatctag 10148766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 649
Target Start/End: Original strand, 10649646 - 10649715
Alignment:
Q  580 gtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||| ||||||| |||||||| ||||| ||  |||||||| |||| ||  |||||||||||||||||||    
T  10649646 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattc 10649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 35631869 - 35631791
Alignment:
Q  479 gaaatcacccctcttca--tctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||||||||| ||||||  |||||||| || || ||||||||||||||||||||||| ||| | ||||| |||||||||||    
T  35631869 gaaatcacccatcttcaactctttttc-ctatatttcaatctaaataagtgattttt-acatatatctaagttttttcttc 35631791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 565
Target Start/End: Complemental strand, 42432264 - 42432172
Alignment:
Q  470 ttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttc 565  Q
    |||||||  ||||||||| |||||||| |||||||||||  ||||||  ||| |||||||||   | | |||||||||||||||||| || |||||    
T  42432264 ttttgactcgaaatcacctctcttcatatttttctctctttttcaattaaaaaaagtgattt---atatagatctaggttttttctttgtaatttc 42432172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 6e-73; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 446 - 681
Target Start/End: Original strand, 37169094 - 37169329
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  |||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37169094 attgaggggtgattttggatcaattttttacctgaaatcacctctcttcacctttttctctctaattcaatataaataagtgatttttcacatagatcta 37169193  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | |||||||||| ||||||||||||||||||||| |||| ||||||  |||||||| ||| | ||  |||||||| |||||||||||||||| |||||||    
T  37169194 gattttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtcgtcttgtgcagcgttgtttgattttccgtattgttgcggtgctcatttg 37169293  T
Q  646 attcatattgaaaatcaattattcaatcaaagaatt 681  Q
    |||||||| ||| |||||||||||||| ||||||||    
T  37169294 attcatatcgaagatcaattattcaattaaagaatt 37169329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 446 - 675
Target Start/End: Original strand, 46934506 - 46934735
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| ||||| |    
T  46934506 attgaggggtggtttttggtcaatttttgacctgaaatcacccctcttcatctttctctctctatttcaatctaaataagtga-ttttcacatagatcca 46934604  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||| || ||||||||||||||||    
T  46934605 ggttttttcttgttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttg 46934704  T
Q  646 attcatattgaaa-atcaattattcaatcaa 675  Q
    ||||||||||||| ||| |||||||||||||    
T  46934705 attcatattgaaagatcgattattcaatcaa 46934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 458 - 678
Target Start/End: Original strand, 22802897 - 22803118
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||      
T  22802897 ttttgggtcaatttttgacatgaaatcactcctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttctctat 22802996  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    ||| ||||||||   |||||||| ||| ||||||| |||||||||||||| ||  ||||||||| ||||| |||||||||||||||||||||||||||||    
T  22802997 gtgctttcgtcatttgagtgtggcggtttgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 22803096  T
Q  658 a-atcaattattcaatcaaaga 678  Q
    | ||||||||||||||||||||    
T  22803097 agatcaattattcaatcaaaga 22803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 457 - 683
Target Start/End: Original strand, 46178451 - 46178670
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46178451 gttttgggtcaatttatgacctgaaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggttttttctt 46178550  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
    ||||||||||||  |||||||||||||||| ||||| ||| |||| ||| ||||  |||        |||||||||| ||||||||||||||||||||||    
T  46178551 cgtgatttcgtcttccgagtgtggtggtgtattgttcgtcatcttgtgcagtgttgttt--------gtattgttgcagtgttcatttgattcatattga 46178642  T
Q  657 aa-atcaattattcaatcaaagaattgg 683  Q
    || ||  |||||||||||||||||||||    
T  46178643 aatattgattattcaatcaaagaattgg 46178670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 25631738 - 25631499
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  25631738 attgaggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta 25631640  T
Q  546 gg--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  ||||||||| |||||||| ||| |  ||||||||||| |||||||   |||||| ||||| ||  ||| ||||||||| ||  |||||||||||||    
T  25631639 ggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttctccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatt 25631540  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| ||||||||| ||| |||||||||||||||| ||||    
T  25631539 tgatttatattgaaagatcgattattcaatcaaagatttgg 25631499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 458 - 683
Target Start/End: Original strand, 29503338 - 29503562
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||| || |||||||||||||| ||||||| |||| ||||||||||||||||||     
T  29503338 ttttgggtcaattcttgacctgaaatcacccatcttcatatttttctctatatttcaatctaaataattgatttt-cacatagatctaggttttttcttt 29503436  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| |   |||||||| |||| || ||||||||||||| |||||||| |||||    
T  29503437 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttgaa 29503536  T
Q  658 aatcaattattcaatcaaagaattgg 683  Q
     ||| |||||||||||||||| ||||    
T  29503537 gatcgattattcaatcaaagatttgg 29503562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 49552434 - 49552202
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||  |||||||   |||||    
T  49552434 attgatgggtggttttgggtcaattcttgacctgaaatcacccctcttcatcattttttctctatttcaatctaaataagtga-atttcacattaatcta 49552336  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||||| |||||||| ||| |  | ||||||||| ||||||| |||||||| ||||| ||  ||||||||| ||| || |||||||||||||||     
T  49552335 ggttttttctttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcatttt 49552236  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||| ||||||| ||| ||||||||||||||||    
T  49552235 attcacattgaaagatcgattattcaatcaaaga 49552202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 448 - 678
Target Start/End: Original strand, 25162302 - 25162532
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    |||||||| |||||| ||||||| ||||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||||    
T  25162302 tgaggggtggttttgtgtcaattcttgatttgaaatcacccatcttcatctttttctctctatttcaatctaaataagtga--tttcacatagatctagg 25162399  T
Q  548 -ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
     ||||||||| |||||||| ||| |  |||||||| || ||||||| |||||||| ||||| ||  ||||||||||| | ||  |||||||||||||||     
T  25162400 tttttttctttgtgatttcatcatctaagtgtggtagtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgt 25162499  T
Q  647 ttcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||| ||| ||||||||||||||||    
T  25162500 ttcatattgaaagatcgattattcaatcaaaga 25162532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 448 - 678
Target Start/End: Complemental strand, 39917605 - 39917376
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    ||||| || |||||||||||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  39917605 tgaggagtggttttgggtcaattcttgacctgaaatcatccatcttcatatttttctctctaattcaatctaaataagtga-ttttcacatagatctagg 39917507  T
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||||| | |||||||| ||| |  ||||||||||| ||||||| || ||||| | ||  ||  ||||||||  ||| ||  |||||||||||||||||    
T  39917506 ttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttgtcttgtacgacgttgtttgattt-tcgtcttcgtgcggtgttcatttgat 39917408  T
Q  648 tcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||| ||| ||||||||||||||||    
T  39917407 tcatattgaaagatcgattattcaatcaaaga 39917376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 35499413 - 35499171
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccc-tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||| ||||||    
T  35499413 attgaggggtggtttttggtcaattttttacctgaaatcaccccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatct 35499315  T
Q  545 aggtttttt----cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttc 640  Q
    |||||||||    ||| || ||||| | | |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||||||||||    
T  35499314 aggttttttttttctttgtaatttcattatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttc 35499215  T
Q  641 atttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  35499214 atttgattcatattgaaagatcgattgttcaatcaaagatttgg 35499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 457 - 683
Target Start/End: Original strand, 36905996 - 36906223
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttct 555  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||| |||| |||| ||||||||    
T  36905996 gttttgggtcaattcttgacctgaaatcacccttcttcatctttttctctttatttcaatataaataagtga-ttttcacatagatttaggtttttttct 36906094  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||  |||||||||||||||||||||    
T  36906095 ttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattg 36906194  T
Q  656 aaa-atcaattattcaatcaaagaattgg 683  Q
    ||| ||||||| |||||||||||| ||||    
T  36906195 aaagatcaattgttcaatcaaagatttgg 36906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 4178428 - 4178666
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| | | |||||    
T  4178428 attgaggggtggttttgggtcaattcttgacctaaaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ttttcagataaatcta 4178526  T
Q  546 g-gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |  ||||||||| |||||||| ||| |  ||||||||||| |||| ||  ||||||| ||||| ||  ||| ||||||||| ||  ||||||||||||||    
T  4178527 gctttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcattt 4178626  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||| ||||||||| ||| ||||||||| |||||| ||||    
T  4178627 gatttatattgaaagatccattattcaaacaaagatttgg 4178666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 451 - 683
Target Start/End: Original strand, 32607337 - 32607570
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||| |||| ||||||||||||    
T  32607337 ggggtggttttgggtcaattcttgacctgaaat-acccctcttcatcattttctctttatttcaatctaaataagtgatttt-cacatagatctaggttt 32607434  T
Q  551 ttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    |||  ||| || ||||| ||| |  ||||||||| | ||||||| |||||||| || || ||  ||||||||||||| ||  ||||||||||||||||||    
T  32607435 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgatt 32607534  T
Q  649 catattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||| ||  ||| |||||||||||| ||||    
T  32607535 catattgaaagattgattgttcaatcaaagatttgg 32607570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 51202460 - 51202227
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||        ||||||| |||||||    
T  51202460 attgaggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctctctatttcaatctaaat--------tttcacatagatcta 51202369  T
Q  546 ggttttttcttc---gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    |||||||| |||   |||||||| ||| |  ||||||||||| |||||||||||||||| ||||| ||  ||||||||||| |  |  ||||||||||||    
T  51202368 ggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcat 51202269  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||| |||| | ||||||||||||| ||||    
T  51202268 ttgattcatattgaaagatcagtaattcaatcaaagatttgg 51202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 457 - 683
Target Start/End: Complemental strand, 38440777 - 38440554
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    |||||| ||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  38440777 gttttgagtcaattcttgacctgaaatcactcctctttatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttctt 38440679  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
      ||||||| | | |  ||||||||||| ||||||| ||||||||||    || | ||||||||  ||| ||  |||  |||||||||||||||||||||    
T  38440678 tttgatttcatgatcaaagtgtggtggtttgttgttcgtcgtcttat---atggcgtttgatttttcgtcttcgtgcaatgttcatttgattcatattga 38440582  T
Q  657 aa-atcaattattcaatcaaagaattgg 683  Q
    || ||| |||||||||||||||| ||||    
T  38440581 aagatcgattattcaatcaaagatttgg 38440554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 447 - 676
Target Start/End: Complemental strand, 44907609 - 44907379
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag 546  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| |||| ||||||||    
T  44907609 ttgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaacaagtgatttt-cacatagatctag 44907511  T
Q  547 gtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |||||||  ||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||  ||  ||||||||||  | ||  ||||||||||||||    
T  44907510 gttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgc-gttgtttgatttcctatcttcgtgcggtgttcattt 44907412  T
Q  645 gattcatattgaaa-atcaattattcaatcaaa 676  Q
     ||||||||||||| ||| ||| ||||||||||    
T  44907411 aattcatattgaaagatcgattgttcaatcaaa 44907379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 457 - 683
Target Start/End: Complemental strand, 50611617 - 50611391
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttct 555  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| |||||| | ||||||||| ||||||||    
T  50611617 gttttgggtcaattattgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcatatagatctaggtttttttct 50611519  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    | |||||||| ||| |  |||||| |||| | ||||| |||||||||||||| ||  ||| |||| ||||  |  |||||||||||||||||| ||||||    
T  50611518 ttgtgatttcatcatctaagtgtgatggtttattgttcgtcgtcttatgcggcgt-gtttcattttccgtcctcgtgcggtgttcatttgatttatattg 50611420  T
Q  656 aaa-atcaattattcaatcaaagaattgg 683  Q
    ||| ||| ||||||||||| |||| ||||    
T  50611419 aaagatcgattattcaatcgaagatttgg 50611391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 14464371 - 14464611
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  14464371 attgaagggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 14464469  T
Q  546 gg---ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
     |   ||||||||| |||||||| ||  |  ||||||||| | |||  ||  |||| |  ||||| ||  ||| ||||||||| ||  ||||||||||||    
T  14464470 agtttttttttctttgtgatttcatcttctaagtgtggtgatttgtcattcatcgtttcgtgcggcgttgtttaatttcccgtcttcgtgcggtgttcat 14464569  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||| ||| |||||||||||||||| ||||    
T  14464570 ttgattcatattgaaagatcgattattcaatcaaagatttgg 14464611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 12115957 - 12116194
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||| ||||||| |||||||||||||| | ||||||||||||| |||| || |||||||||||||||||| |||||||| |||||||    
T  12115957 attgaggggtggttttgagtcaattcttgacctgaaatcatctctcttcatcttttcctctttatttcaatctaaataagtga-ttttcacaaagatcta 12116055  T
Q  546 gg----ttttttcttcgtgatttcgtcacccgagtgtggtg-gtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttc 640  Q
    ||    ||||||||| || ||||| | | |  |||||||||  | ||||||| || ||||| ||||| ||  ||||||||||||| ||  ||||||||||    
T  12116056 ggttttttttttctttgtaatttcattatctaagtgtggtgattttgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttc 12116155  T
Q  641 atttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||||||||| ||| ||| ||||||||||||    
T  12116156 atttgattcatattgaaagatcgattgttcaatcaaaga 12116194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 446 - 623
Target Start/End: Original strand, 4172430 - 4172607
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| || || | |||||| || |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  4172430 attgaggggtggttttgggtcaattcttaacataaaatcatccatcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta 4172528  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttccc 623  Q
    || ||||||||| |||||||| ||| |  ||||||||||| |||| || |||||||| ||||||||  ||| |||||||    
T  4172529 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcgtcgtcttgtgcggtgttgtttcatttccc 4172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 446 - 673
Target Start/End: Complemental strand, 38855247 - 38855019
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||| || ||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||    
T  38855247 attgaggggtggttttgggtca-ttcttgaccgaaaatcacccctcttcatctttttctctctatatcaatctaaataagtga-ttttcacatagatcta 38855150  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   ||||||||| |||||||| ||| |  |||||| |||| ||||||| || ||||| || || ||  ||| || ||||||  |  |||||||||||||    
T  38855149 gattttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttcatt 38855050  T
Q  644 tgattcatattgaaa-atcaattattcaatc 673  Q
    ||||| ||||||||| ||| |||||||||||    
T  38855049 tgatttatattgaaagatcgattattcaatc 38855019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 463 - 683
Target Start/End: Original strand, 17237683 - 17237906
Alignment:
Q  463 ggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg---ttttttcttcgt 559  Q
    |||||||| ||||||| ||||||  | ||||||||| |||||||||| |||||||||||||||||| |||||||| |||| ||||   ||||||||| ||    
T  17237683 ggtcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtga-ttttcacatagatttaggtttttttttctttgt 17237781  T
Q  560 gatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa- 658  Q
    |||||| ||| |  ||||||||||| |||||||||||||||| ||||| ||  |||||| ||  || ||   |||||||| |||||||||||||| |||     
T  17237782 gatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaat 17237881  T
Q  659 atcaattattcaatcaaagaattgg 683  Q
    ||| |||||||||||||||| ||||    
T  17237882 atcgattattcaatcaaagatttgg 17237906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 451 - 553
Target Start/End: Complemental strand, 3850661 - 3850560
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  3850661 ggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggttt 3850563  T
Q  551 ttt 553  Q
    |||    
T  3850562 ttt 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 25849684 - 25849906
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||| ||||||||||||| ||||||||||| | ||| ||||||||| |||| ||||||  | |||||||| | |||||| |||||||    
T  25849684 attgaggggtggttttgagtcaatttttgacttgaaatcacccttattcgtctttttctttctatttcaattcagataagtga-tgttcacatagatcta 25849782  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
      |||||||||| | |||||||      ||||||||||||||    |||||||||| ||| | ||  ||| ||||||||| || ||||||||||||||||    
T  25849783 aattttttcttcataatttcgt------agtgtggtggtgtg----ttgtcgtcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttg 25849872  T
Q  646 attcatattg-aaaatcaattattcaatcaaaga 678  Q
    |||||||||| |||||| |||||||||| |||||    
T  25849873 attcatattgaaaaatcgattattcaattaaaga 25849906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 472 - 678
Target Start/End: Original strand, 42719410 - 42719613
Alignment:
Q  472 ttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacc 571  Q
    ||||||||||||||| | ||||| | |||||||||||| |||||| ||||||||||||||| ||   ||||||||||||||     |||| ||| ||| |    
T  42719410 ttgacctgaaatcactcatcttcgtatttttctctctatttcaatttaaataagtgatttt-catgtagatctaggtttttat---gtgagttcatcatc 42719505  T
Q  572 cgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattca 670  Q
      ||||||||||| ||||||| |||||||| ||||| ||  |||||||| |||| ||  |||||||||||||||||||||||||||| ||| ||||||||    
T  42719506 taagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 42719605  T
Q  671 atcaaaga 678  Q
    ||||||||    
T  42719606 atcaaaga 42719613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 516 - 684
Target Start/End: Complemental strand, 30648860 - 30648691
Alignment:
Q  516 tctaaataagtgatttttcacacagatctaggtttttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttt 614  Q
    ||||||||||||| ||| |||| |||||||| |||||| ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  ||    
T  30648860 tctaaataagtgacttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtt 30648762  T
Q  615 tgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    || |||||| | || ||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||    
T  30648761 tgctttcccatcttcttgcggtgttcattttattcatattgaaagatcgattattcaatcaaagatttgga 30648691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 31793944 - 31794172
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||| |||| ||||| |||| |||||| | |||||  || |||| |||||| |||||||||||||||||||||| |||| ||||||     
T  31793944 attgacgggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgatttt-cacatagatct- 31794040  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
           || ||||||||| |||| | |||||| ||||||||||||| ||||| || ||||| ||  |||||||| |  | |||||||||||||||||||    
T  31794041 -------tcctcgtgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttg 31794133  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  31794134 attcatattgaaagatcgattattcaatcaaagatttgg 31794172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 548 - 683
Target Start/End: Complemental strand, 36734801 - 36734665
Alignment:
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    |||||||||||||||||||||| || | |||| |||||||||||| |||||||| ||||| ||  |||||||| |||| || ||||||||||||||||||    
T  36734801 ttttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgat 36734702  T
Q  648 tcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| ||||| ||| |||||| ||||||||| ||||    
T  36734701 tcataatgaaagatcgattattgaatcaaagatttgg 36734665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 574 - 683
Target Start/End: Original strand, 21488082 - 21488192
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg-aaaatcaattattcaat 672  Q
    ||||||||||| |||||||||||||||| ||||| ||  ||||||||||||| || |||||||||| ||||||||||||||| |||||| ||||||||||    
T  21488082 agtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattcaat 21488181  T
Q  673 caaagaattgg 683  Q
    |||||| ||||    
T  21488182 caaagatttgg 21488192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 607
Target Start/End: Complemental strand, 47980879 - 47980713
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc----------tctaattcaatctaaataagtgatttttca 535  Q
    |||||| ||| |||||||||||||||||||||||||||||     ||| |||||||||||          || | |||||||||||||||||||||||||    
T  47980879 attgagtggtggttttgggtcaatttttgacctgaaatca-----ctttatctttttctctcaatttcaatccatttcaatctaaataagtgatttttca 47980785  T
Q  536 cacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcgg 607  Q
    || | |||||||| |||| |||||||||||||||  ||| ||||||||| |||||||  |||||||||||||    
T  47980784 cataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcgg 47980713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 607
Target Start/End: Complemental strand, 47990166 - 47990000
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc----------tctaattcaatctaaataagtgatttttca 535  Q
    |||||| ||| |||||||||||||||||||||||||||||     ||| |||||||||||          || | |||||||||||||||||||||||||    
T  47990166 attgagtggtggttttgggtcaatttttgacctgaaatca-----ctttatctttttctctcaatttcaatccatttcaatctaaataagtgatttttca 47990072  T
Q  536 cacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcgg 607  Q
    || | |||||||| |||| |||||||||||||||  ||| ||||||||| |||||||  |||||||||||||    
T  47990071 cataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcgg 47990000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 607
Target Start/End: Complemental strand, 47999453 - 47999287
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc----------tctaattcaatctaaataagtgatttttca 535  Q
    |||||| ||| |||||||||||||||||||||||||||||     ||| |||||||||||          || | |||||||||||||||||||||||||    
T  47999453 attgagtggtggttttgggtcaatttttgacctgaaatca-----ctttatctttttctctcaatttcaatccatttcaatctaaataagtgatttttca 47999359  T
Q  536 cacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcgg 607  Q
    || | |||||||| |||| |||||||||||||||  ||| ||||||||| |||||||  |||||||||||||    
T  47999358 cataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcgg 47999287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 607
Target Start/End: Complemental strand, 48008740 - 48008574
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc----------tctaattcaatctaaataagtgatttttca 535  Q
    |||||| ||| |||||||||||||||||||||||||||||     ||| |||||||||||          || | |||||||||||||||||||||||||    
T  48008740 attgagtggtggttttgggtcaatttttgacctgaaatca-----ctttatctttttctctcaatttcaatccatttcaatctaaataagtgatttttca 48008646  T
Q  536 cacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcgg 607  Q
    || | |||||||| |||| |||||||||||||||  ||| ||||||||| |||||||  |||||||||||||    
T  48008645 cataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcgg 48008574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 447 - 589
Target Start/End: Original strand, 2342357 - 2342498
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta- 545  Q
    ||||||||| |||||||||||||| |  ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||     
T  2342357 ttgaggggtggttttgggtcaattctaaacctgaa-tcaaccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatatatctat 2342454  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgtt 589  Q
      ||||||||| |||||||| ||| |  ||||||||||| ||||    
T  2342455 atttttttctttgtgatttcatcatctaagtgtggtggtttgtt 2342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 528
Target Start/End: Original strand, 21487993 - 21488057
Alignment:
Q  464 gtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtga 528  Q
    ||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||    
T  21487993 gtcaatttttgacctgaaatcaccaatcttcatctttttctctccatttcaatctaaataagtga 21488057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 36735363 - 36735275
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttc 534  Q
    |||||| ||| ||||| ||||||||||| ||||||||||| |||||||||| ||| ||||| || |||||| |||||||||||||||||    
T  36735363 attgagaggtggtttttggtcaattttttacctgaaatcatccctcttcatttttctctctatatttcaatttaaataagtgatttttc 36735275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 606
Target Start/End: Original strand, 54378816 - 54378923
Alignment:
Q  498 tttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcg 597  Q
    |||||||||| | |||||||||||| |||||||||||||  |||||||  ||||||||||||||||| |||||| |||||||||| |||||  || ||||    
T  54378816 tttttctctccatttcaatctaaatgagtgatttttcacgtagatctaa-ttttttcttcgtgattttgtcacctgagtgtggtgatgtgtatttcgtcg 54378914  T
Q  598 tcttatgcg 606  Q
    |||| ||||    
T  54378915 tcttgtgcg 54378923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 574 - 684
Target Start/End: Complemental strand, 3849002 - 3848891
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||| | || ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  3849002 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatcgattattcaat 3848903  T
Q  673 caaagaattgga 684  Q
    |||||| |||||    
T  3848902 caaagatttgga 3848891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 560 - 658
Target Start/End: Complemental strand, 4396463 - 4396365
Alignment:
Q  560 gatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    |||||||||| |||| || |||| |||||||||||||||||| || || ||  ||||||||  ||  |||||||||||||| |||||||||||||||||    
T  4396463 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaa 4396365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 6823597 - 6823553
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttt 501  Q
    |||||||||||||| |||| |||||||||||||||||||||||||    
T  6823597 gttttgggtcaattcttgatctgaaatcacccctcttcatctttt 6823553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 500 - 598
Target Start/End: Original strand, 30829892 - 30829989
Alignment:
Q  500 tttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgt 598  Q
    |||||||||| ||||||| |||| || ||||||  ||| ||||||||||| |||| |||||||||| ||| | |||||||  | |||||||||||||||    
T  30829892 tttctctctatttcaatccaaatgagggattttg-acatagatctaggttgtttcatcgtgatttcatcatctgagtgtgacgttgtgttgtttgtcgt 30829989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 587 - 659
Target Start/End: Complemental strand, 46322427 - 46322355
Alignment:
Q  587 gttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaaa 659  Q
    |||||| ||||| || | ||||||  |||| ||| |||| ||||||||||||||||||| |||||||||||||    
T  46322427 gttgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttcatttggttcatattgaaaa 46322355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 658
Target Start/End: Complemental strand, 12947416 - 12947305
Alignment:
Q  547 gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
    ||||||| ||||||||||||||    ||||| ||   ||||||||| |||||||| ||||| ||  ||||||||| | | |||||| ||||||| ||||     
T  12947416 gtttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttgg 12947317  T
Q  647 ttcatattgaaa 658  Q
    ||||||||||||    
T  12947316 ttcatattgaaa 12947305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 658
Target Start/End: Original strand, 29922011 - 29922114
Alignment:
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||||||||||||  | |||||||| | ||||||||||  |||||| || |  ||| ||||||||| ||| ||||||||||||  ||||  ||||||||    
T  29922011 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatatt 29922110  T
Q  655 gaaa 658  Q
    ||||    
T  29922111 gaaa 29922114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 658
Target Start/End: Original strand, 29971164 - 29971267
Alignment:
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||||||||||||  | |||||||| | ||||||||||  |||||| || |  ||| ||||||||| ||| ||||||||||||  ||||  ||||||||    
T  29971164 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatatt 29971263  T
Q  655 gaaa 658  Q
    ||||    
T  29971264 gaaa 29971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 524
Target Start/End: Original strand, 19605927 - 19605993
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataa 524  Q
    ||||||||||| | ||||| ||||||| ||| ||||||| |||||| ||||| ||||||| ||||||    
T  19605927 ttttgggtcaaatgttgacatgaaatcgcccttcttcatatttttcactctatttcaatccaaataa 19605993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 3606637 - 3606710
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttt 532  Q
    |||| |||||||||| | ||||||||||   ||||| ||| |||||| ||| || |||||||||||||||||||    
T  3606637 tttgtgtcaattttttatctgaaatcactaatcttcttctctttctccctattttaatctaaataagtgatttt 3606710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 6913321 - 6913249
Alignment:
Q  482 atcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttct 555  Q
    ||||||||| ||||||| ||||||| |  ||||||||| ||| |||||||| |||| ||||| |||||||||||    
T  6913321 atcaccccttttcatctctttctctatgtttcaatctagataggtgatttt-cacatagatcgaggttttttct 6913249  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 10232911 - 10232964
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  10232911 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 10232964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 21431466 - 21431518
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||| |||||||||    
T  21431466 gaggggtggttttaggtca-tttttgacctaaaatcacccctctacatcttttt 21431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 499
Target Start/End: Complemental strand, 30648938 - 30648898
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctt 499  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  30648938 ttttgggtcaatttttgacctggaa-cacccctcttcatctt 30648898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Complemental strand, 48650983 - 48650930
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||  |||||||||    
T  48650983 gaggggtggttttaggtcattttttgacctaaaatcacccctcgacatcttttt 48650930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 54148829 - 54148882
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  54148829 gaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttt 54148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 674
Target Start/End: Complemental strand, 6910731 - 6910691
Alignment:
Q  635 gtgttcatttgattcatattgaaa-atcaattattcaatca 674  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  6910731 gtgttcatttgattcatattgaaagatcgattattcaatca 6910691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 446 - 502
Target Start/End: Complemental strand, 9797781 - 9797725
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    |||||| ||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  9797781 attgagaggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 9797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 458 - 537
Target Start/End: Original strand, 16235269 - 16235349
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaatt-caatctaaataagtgatttttcaca 537  Q
    |||| ||||||||||||||||  |||||| | ||| |||||||||  || |  || |||||||||||||||||||||||||    
T  16235269 ttttaggtcaatttttgacctagaatcactcatctgcatcttttttccttttttttcaatctaaataagtgatttttcaca 16235349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 458 - 502
Target Start/End: Complemental strand, 21290058 - 21290014
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    |||| ||||||||||||||||  |||||||||||| |||||||||    
T  21290058 ttttaggtcaatttttgacctagaatcacccctctgcatcttttt 21290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 458 - 676
Target Start/End: Complemental strand, 31235991 - 31235772
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| |    
T  31235991 ttttgggtcaatttttgacatgaaatctcccctcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctac 31235892  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||||||| |  ||||||| ||| ||||||| |||||||| ||| | ||  ||||||||| ||||| |||||||||||||||||||||||||||||    
T  31235891 gtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 31235792  T
Q  658 a-atcaattattcaatcaaa 676  Q
    | ||||||||||||||||||    
T  31235791 agatcaattattcaatcaaa 31235772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 458 - 678
Target Start/End: Original strand, 6001899 - 6002120
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||||||||||||||||| |||| |||||||| ||| |    
T  6001899 ttttggatcaatttttgacctgaaatcacccatcttcatctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctac 6001998  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||||||| | |||||||| ||| ||||||| |||||||| ||||| ||  ||||||||| ||||| || ||||||||||||||||||||||||||    
T  6001999 gtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaa 6002098  T
Q  658 a-atcaattattcaatcaaaga 678  Q
    | ||||||||||||||||||||    
T  6002099 agatcaattattcaatcaaaga 6002120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 449 - 683
Target Start/End: Complemental strand, 23425579 - 23425346
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggt 548  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  23425579 gaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttt-acatagatctaggt 23425481  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    |||||||| |||||||| |||    ||||||||||| ||||||| |||||||| |||||||   ||||||||||||| || ||||||||||||| |||||    
T  23425480 tttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcatctgatt 23425381  T
Q  649 catattgaaaatcaattattcaatcaaagaattgg 683  Q
     || ||||| ||| |||||| || |||||| ||||    
T  23425380 tattttgaagatcgattattaaaacaaagatttgg 23425346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 446 - 675
Target Start/End: Complemental strand, 35667442 - 35667213
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| |||||| ||||| | ||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||| |||||||    
T  35667442 attgaggggtggttttggatcaattcttgacttaaaatcacccttcttcatatttttctctctatttcaatctaaataagtgatttt-cacatagatcta 35667344  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| || ||||||||| |||| || ||||||||||||||||    
T  35667343 ggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttg 35667244  T
Q  646 attcatattgaaa-atcaattattcaatcaa 675  Q
    ||||||||||||| ||| |||||||||||||    
T  35667243 attcatattgaaagatcgattattcaatcaa 35667213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 448 - 676
Target Start/End: Original strand, 20116451 - 20116679
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||    
T  20116451 tgaggggtagttttgggtcaatttttgacctgaaatcacccttcttcatctttttctatctatttcaatctaaataagtga-ttttcacatagatctagg 20116549  T
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||||||| |||||||| |||      |||||| || ||||||| |||||||| ||||  ||  |||||||| |||| || ||||||||||||||||||    
T  20116550 ttttttctttgtgatttcatcatatacatgtggttgtttgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgat 20116649  T
Q  648 tcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||||| ||| ||||||||||||||    
T  20116650 tcatattgaaagatcgattattcaatcaaa 20116679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 684
Target Start/End: Complemental strand, 22928076 - 22927842
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag-gtt 549  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||  ||    
T  22928076 ggggtggttttgggtcaattcttgacctgaaatcaccccttttcatctttttctctctatttcaatctaaataagtga-ctttcacacagatctagtttt 22927978  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||||||||||||||| ||||    
T  22927977 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattc 22927878  T
Q  650 atattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||||||| ||| |||||||||||||||| |||||    
T  22927877 ctattgaaagatcgattattcaatcaaagatttgga 22927842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 447 - 684
Target Start/End: Complemental strand, 1449039 - 1448802
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag 546  Q
    ||||||||| |||||||||||||| |||||||||||| |||   |||||||| |||||||||| |||||||||||||||||| |||||||| ||||||||    
T  1449039 ttgaggggtggttttgggtcaattcttgacctgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-ttttcacatagatctag 1448941  T
Q  547 gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
     |||||| || |||||||| ||| |  |||||||| || ||||||| ||||| || ||||| ||  ||||||||| ||| || |||||||||||||||||    
T  1448940 attttttatttgtgatttcatcatctaagtgtggttgtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttga 1448841  T
Q  647 ttcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||||||| ||| |||||||||||||||| |||||    
T  1448840 ttcatattgaaagatccattattcaatcaaagatttgga 1448802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 448 - 683
Target Start/End: Original strand, 42311148 - 42311384
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| | |||||| |||||||||    
T  42311148 tgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcatcattttctctctatttcaatctaaataagtga-tattcacatagatctagg 42311246  T
Q  548 -ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
     ||||||||| |||||||| |||    ||||||| ||| ||||||| |||||||||||| | ||  |||||||| |||| ||  |||| |||||||||||    
T  42311247 tttttttctttgtgatttcatcatttaagtgtggcggtttgttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttga 42311346  T
Q  647 ttcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||| ||| |||||||||||||||| ||||    
T  42311347 ttcatattgaaagatcgattattcaatcaaagatttgg 42311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 452 - 683
Target Start/End: Original strand, 48207775 - 48208004
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||| ||||||| |||||    
T  48207775 gggtggttttgggtca-ttcttgacctgaaatcacccctcttcatctttttctcaatatttcaatctaaataagtga-ttttcacatagatctatgtttt 48207872  T
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    ||||| |||||||| ||| |  ||||||||| | ||||||| |||||||| ||| | |   ||||||||||||| || ||||||||||||||||||||||    
T  48207873 ttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgctgtttgatttcccgtcttcttgcggtgttcatttgattcat 48207972  T
Q  652 attgaaaatcaattattcaatcaaagaattgg 683  Q
     ||||| ||| ||||| |||||||||| ||||    
T  48207973 tttgaagatccattatacaatcaaagatttgg 48208004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 26583580 - 26583813
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| | | |||||    
T  26583580 attgaggggtggtttttggtcaattcttgacctgaaatcacccctcttcatctttttatctctatttcaatctaaataagtga-ttttcatatatatcta 26583678  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||||| |||||||  ||||||| ||||| ||  |||||||||| || ||  |||  |||||||||    
T  26583679 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttccagtcttcgtgcaatgttcattt 26583778  T
Q  645 gattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||||| ||| ||||||||||||||||    
T  26583779 gattcatattgaaagatcgattattcaatcaaaga 26583813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 458 - 683
Target Start/End: Complemental strand, 42067259 - 42067035
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || ||| || |||||||||||||||||||||| |||| |||| ||| |||||||||     
T  42067259 ttttgggtcaattcttgacctgaaatcacctctcttcatcttgttatctatatttcaatctaaataagtgatttt-cacatagatatagattttttcttt 42067161  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
     ||||||| ||| |  |||||| |||| ||||||| |||||||| ||||| |   ||||||||| ||| || ||||||||||||||||||||||||||||    
T  42067160 ctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 42067061  T
Q  658 aatcaattattcaatcaaagaattgg 683  Q
     ||| |||||||||||||||| ||||    
T  42067060 gatcgattattcaatcaaagatttgg 42067035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 46821880 - 46822119
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  46821880 attgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 46821978  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   ||||||||| || ||||| ||| |  ||| ||||| | ||||||| ||| |||| ||||| ||  ||||||||||||| ||  |||||||||||||    
T  46821979 gattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatt 46822078  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||| ||| ||| ||| |||||||||||| ||||    
T  46822079 tgattcatattaaaagatcgattgttcaatcaaagatttgg 46822119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 26492231 - 26492469
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  26492231 attgaggggtggttttgggtcaattcttgacctgaaataacccctcttcatctttttctctctatttcaatttaaataagtga-ttttcacatagatcta 26492329  T
Q  546 g-gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |  ||||||||| |||||||| ||| |  ||||||||||| ||||||  | |||||| ||| | ||  ||||||||||||| ||   ||| |||||||||    
T  26492330 gttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtccgccgtcttgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcattt 26492429  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||  || |||||||||||||||| ||||    
T  26492430 gattcatattgaaaggtcgattattcaatcaaagatttgg 26492469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 35496386 - 35496148
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||| ||||||||  |||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||    
T  35496386 attgaggggtggttttgggtcaattcttgacctaaaatcaccaatcttcatctttttctctctatttcaatctaattaagtga-ttttcacatagatcta 35496288  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||||| |||||||  ||||||| ||||| ||  ||| |||||||||  |  ||||||||||||||    
T  35496287 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcattt 35496188  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||| ||||||||| ||| ||||||||||| |||| ||||    
T  35496187 gatttatattgaaagatcgattattcaatcgaagatttgg 35496148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 471 - 678
Target Start/End: Complemental strand, 32522117 - 32521905
Alignment:
Q  471 tttgacctgaaatcacccctcttcatcttttt-----ctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttc 565  Q
    |||||||||||||||||| |||||||||||||     ||||||| |||||| ||||||||||||||| |||| |||| || ||||||||||||| |||||    
T  32522117 tttgacctgaaatcacccatcttcatcttttttttctctctctatttcaatttaaataagtgatttt-cacatagatttatgttttttcttcgttatttc 32522019  T
Q  566 gtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaat 664  Q
    | || | ||||||||| |||||||||| ||| |||| ||||| ||  |||||||| |||| |||||| ||||||||||||||||||||||||| ||||||    
T  32522018 gccatctgagtgtggttgtgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaat 32521919  T
Q  665 tattcaatcaaaga 678  Q
    ||||||||||||||    
T  32521918 tattcaatcaaaga 32521905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 1485467 - 1485229
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| ||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  1485467 attggggggtggttttgggttaattcttgacctaaaatcacccgtcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatcta 1485369  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||| | ||  |||| |||||| | || ||||||| |||||||     
T  1485368 gattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgttttcccatcttcttgcggtattcatttt 1485269  T
Q  646 attcatattg-aaaatcaattattcaatcaaagaattgga 684  Q
    ||||  |||| |||||| |||||||||||||||| |||||    
T  1485268 attccaattgaaaaatcgattattcaatcaaagatttgga 1485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 21266258 - 21266489
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  21266258 attgaggggtggttttgggtcaattattgacatgaaatcacctctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 21266356  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcg-gtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    ||  |||||||  ||||||| ||| |  ||||||||||| |||| || |||||||| ||||    | |||| |||| |||| || ||||||||||||| |    
T  21266357 gg-gttttctttttgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcgacatttttttaattttccgtcttcttgcggtgttcatct 21266455  T
Q  645 gattcatattgaaaatcaattattcaatcaaaga 678  Q
    ||||||||||||| ||| ||||||||||||||||    
T  21266456 gattcatattgaagatcgattattcaatcaaaga 21266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 450 - 683
Target Start/End: Complemental strand, 45199238 - 45199006
Alignment:
Q  450 aggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtt 549  Q
    |||||| ||||||| |||| | ||||||||||||||||| ||||||||||||||||| || || ||| ||||||||||||||| || | ||||||| |||    
T  45199238 aggggtggttttggatcaactattgacctgaaatcacccatcttcatctttttctctatattttaatttaaataagtgatttt-catatagatctaagtt 45199140  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||| |||||||| ||| |  ||||||||||| ||||||| ||||| || ||||| |   ||||||||||||| || ||||||||||||| ||||||    
T  45199139 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttcatctgattc 45199040  T
Q  650 atattgaaaatcaattattcaatcaaagaattgg 683  Q
    || ||||| |||  ||||||||||||||| ||||    
T  45199039 attttgaagatcggttattcaatcaaagatttgg 45199006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 46338919 - 46339158
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| || |||||| ||||||||||||||| |||| |||||||    
T  46338919 attgaggggtagttttgggtcaattcttgacctgaaattatccctcttcatctttttctctttatttcaatgtaaataagtgatttt-cacatagatcta 46339017  T
Q  546 ggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    | ||||||  ||| || ||||| |||    ||||||||| | ||||||| |||||||| ||||| ||  |||||||| |||| ||  | |||||||||||    
T  46339018 gcttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatt 46339117  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||    
T  46339118 tgattcatattgaaagatctattgttcaatcaaagatttgg 46339158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 678
Target Start/End: Original strand, 17610998 - 17611224
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||  || | |||||| ||||        |||||||| | | |||    
T  17610998 ttgaggggtggttttaggtcaatttatgacctgaaatcacccctcttcatctttttctagtccatttcaatttaaaa-------ttttcacataaaacta 17611090  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | |||||||||||||||||||||| ||||||||||||||||||| || |||||||| ||||| ||  |||||||| | || ||||||| |||||||||||    
T  17611091 gattttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttg 17611190  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||| ||  ||||||||||||||||    
T  17611191 attcatattgaaagattgattattcaatcaaaga 17611224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 451 - 678
Target Start/End: Original strand, 23085391 - 23085620
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccc-tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtt 549  Q
    ||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||| |||| |||||||||||||| ||| ||| |||| |||||||||||    
T  23085391 ggggtggttttgggtcaattattgacttgaaatcaccccctcttcatctttttctttctatttcaatctaaataattgacttt-cacatagatctaggtt 23085489  T
Q  550 tttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    |||| ||| |||||||  ||| |  ||||||||||| ||||||| |||||| | |||||  |  |||| |||||||| || ||||||||||||||| |||    
T  23085490 tttttctttgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttcattttatt 23085589  T
Q  649 catattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||| ||| ||||||||||||||||    
T  23085590 catattgaaagatcgattattcaatcaaaga 23085620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 42408228 - 42408466
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||| | ||||| ||||| || |||||||||||||| || ||||||||||||||||| || |||||||||||||| || |||||||||  ||||||    
T  42408228 attgagggatggtttttggtcagttcttgacctgaaatcatccatcttcatctttttctctttatttcaatctaaataattg-tttttcacatggatcta 42408326  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| |||    ||||||||||| ||||||| |||||||| ||| | ||  |||||||| |||| ||  |||||| |||||||    
T  42408327 ggtttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcattt 42408426  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| |||||||||||||||| ||||    
T  42408427 gattcatattgaaagatcgattattcaatcaaagatttgg 42408466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 36143732 - 36143875
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| |||| |||| || |||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  36143732 attgaggggttgttttggatcaaattttaacgtgaaattatccatcttcatctttttctctctaattcaatctaaataagtg-tttttcacgtagatcta 36143830  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttg 590  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  36143831 ggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgttg 36143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 14628091 - 14627857
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacc-cctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    ||||| |||| |||||||||||| |||| ||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| | || |    
T  14628091 attgaagggtggttttgggtcaaatttttaccggaaattacctcctcttcatctttttttctctaattcaatctaaataagtga-ttttcacataaatat 14627993  T
Q  545 agg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||| ||||||| | |||||||| ||| |  ||||||||||| ||||||| ||||| || ||||| ||  ||||||||| ||| ||  | ||||||| |||    
T  14627992 aggtttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatt 14627893  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||||| ||| ||||||||||||||||    
T  14627892 tgattcatattgaaagatcgattattcaatcaaaga 14627857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 451 - 684
Target Start/End: Complemental strand, 433898 - 433663
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag-gtt 549  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||  ||||||| ||||||||  ||    
T  433898 ggggtggttttgggtcaatttttgacctgaaatcatcccttttcatctttttctctctatttcaatctaaataaatga-ctttcacatagatctagattt 433800  T
Q  550 ttttcttcgtgatttcgtcacccgagtgt-ggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    ||||||| |||||||| ||| |  ||||| |||||| ||||||| || ||||| ||| | ||  |||| |||| ||| || || | |||||||||| |||    
T  433799 ttttctttgtgatttcatcatctaagtgtgggtggtttgttgttcgttgtcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttatt 433700  T
Q  649 catattgaaa-atcaattattcaatcaaagaattgga 684  Q
    | |||||||| ||| |||||||||||||||| |||||    
T  433699 cctattgaaagatcgattattcaatcaaagatttgga 433663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 496 - 683
Target Start/End: Complemental strand, 46818577 - 46818389
Alignment:
Q  496 tctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgt 595  Q
    |||||||||||||   |||||||||||||||||||||||||| | || | |||||||||||| ||||||||||| |||||||||| |||| |||||| |     
T  46818577 tctttttctctctcgctcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatccgagtgtggcggtgcgttgttcga 46818478  T
Q  596 cgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
      |||| ||||| ||  ||||||||| |||||||||||||||||||||| ||||||||| ||| ||| ||| |||| ||||||||||||    
T  46818477 aatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaagatcgattgttcagtcaaagaattgg 46818389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 2843438 - 2843219
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  2843438 attgaagggtggttttgggtcaattcttgacctgaaaacacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 2843340  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||| || || ||||| ||| |  ||||||||| | ||||||| |||||    ||        ||||||||||||| ||  |||||||||||||||    
T  2843339 ggtttttt-tttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgt----tg--------tttgatttcccgtcttcgtgcggtgttcatttg 2843253  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||| ||| ||| ||||||||||||    
T  2843252 attcatattgaaagatcgattgttcaatcaaaga 2843219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 453 - 678
Target Start/End: Original strand, 35261170 - 35261397
Alignment:
Q  453 ggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttct-ctctaattcaatctaaataagtgatttttcacacagatctag--gtt 549  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||||  || | ||||||| |||||||||| |||||||| | || |||   ||    
T  35261170 ggtagttttgggccaatttttgacctaaaatcacccatcttcatctttttctagtccatttcaatccaaataagtga-ttttcacataaatttagatttt 35261268  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    |||||||||||||||||||| || |||||||| |||||||||| |||||||  ||| |  |  |||||||| |||| ||  ||| |||||||||||||||    
T  35261269 ttttcttcgtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtctcctgcagcattatttgattttccgtctttgtgc-gtgttcatttgattc 35261367  T
Q  650 atattgaaa-atcaattattcaatcaaaga 678  Q
    ||||| ||| ||| ||||||||||||||||    
T  35261368 atattaaaagatcgattattcaatcaaaga 35261397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 678
Target Start/End: Original strand, 23786508 - 23786674
Alignment:
Q  511 ttcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgt 610  Q
    |||||||||||||||||||||| |||||| |||||  ||||||||| |||||| | ||| |  ||||||||||| ||||||| |||||||| ||||| ||    
T  23786508 ttcaatctaaataagtgatttt-cacacatatctaaattttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgt 23786605  T
Q  611 cttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
      ||||||||| ||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  23786606 tgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaaga 23786674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 32684551 - 32684772
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||||||   |||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  32684551 attgaggggtggttttgggtcaattcttgacctgaaatcacatgtcttcatcgttttctctctatttcaatctaaataagtga-ttttcacatagatcta 32684649  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||  ||| |                |||| |  | ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||||||    
T  32684650 ggtttttctttctt----------------tgtgattttttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttg 32684733  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  32684734 attcatattgaaatatcgattattcaatcaaagatttgg 32684772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 519 - 684
Target Start/End: Complemental strand, 17223136 - 17222972
Alignment:
Q  519 aaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgat 618  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||| ||| |  ||||||||| | |||||||  ||||||| ||||| ||  ||||||    
T  17223136 aaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgat 17223038  T
Q  619 ttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    || || | ||  ||| |||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  17223037 tttccttcttcatgc-gtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgga 17222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 451 - 683
Target Start/End: Original strand, 20083203 - 20083441
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttt-tcacacagatctagg-t 548  Q
    ||||| ||||| ||| |||||||||||| |||| ||| |||||||||||||||| |||| |||||||||||||||  |||||  || | | ||||||| |    
T  20083203 ggggtggttttaggttaatttttgacctaaaat-accactcttcatctttttctttctatttcaatctaaataagcaattttcacatatatatctaggtt 20083301  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttg-----tttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||||||||| |||||||| || |  |||||| ||||||||||     ||||||||||| || |  ||  ||||||||||||| ||||||||||||||| |    
T  20083302 tttttcttcatgatttcgacatctaagtgtgatggtgtgttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttcagt 20083401  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    || || || |||||| ||| ||| |||||||||||| ||||    
T  20083402 tgttttattttgaaagatcgatt-ttcaatcaaagatttgg 20083441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 521 - 683
Target Start/End: Original strand, 6558817 - 6558981
Alignment:
Q  521 ataagtgatttttcacacagatctaggttttt--tcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgat 618  Q
    |||||||||||| |||| |||| |||||||||  |||| |||||||| ||| |  ||||||||||| ||||||| |||||||| | ||  ||  || |||    
T  6558817 ataagtgatttt-cacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgat 6558915  T
Q  619 ttcccgtattgttgcggtgttcatttgattcatattg-aaaatcaattattcaatcaaagaattgg 683  Q
    ||||||| ||  ||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||    
T  6558916 ttcccgtcttcgtgcggtgttcatttgattcattttgaaaaatcgattattcaatcaaagatttgg 6558981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 650
Target Start/End: Complemental strand, 17499857 - 17499666
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||||||||||||||||| ||| |||| ||||||| | ||||||||||||||            ||||||||||| | |||||||| |||||||    
T  17499857 attgaggggtagttttgggtcaatatttaacctaaaatcactcatcttcatctttttc------------tctaaataagtta-ttttcacaaagatcta 17499771  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||| | |||||||| ||| |  ||||| ||||||| |||||   |||||| ||||   |  |||||||| |||| |||||||||| ||||||||    
T  17499770 ggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattttccgtcttgttgcggtattcatttg 17499671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 650
Target Start/End: Original strand, 17553357 - 17553548
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||||||||||||||||| ||| |||| ||||||| | ||||||||||||||            ||||||||||| | |||||||| |||||||    
T  17553357 attgaggggtagttttgggtcaatatttaacctaaaatcactcatcttcatctttttc------------tctaaataagtta-ttttcacaaagatcta 17553443  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||| | |||||||| ||| |  ||||| ||||||| |||||   |||||| ||||   |  |||||||| |||| |||||||||| ||||||||    
T  17553444 ggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattttccgtcttgttgcggtattcatttg 17553543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 574 - 683
Target Start/End: Original strand, 34773705 - 34773815
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||| | |||| || |||||||||||||| ||  |||||||||| || || ||||||||||||||||||||||||||||| ||| ||  ||||||    
T  34773705 agtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatcgatcgttcaat 34773804  T
Q  673 caaagaattgg 683  Q
    |||||| ||||    
T  34773805 caaagatttgg 34773815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 565
Target Start/End: Original strand, 3860829 - 3860935
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    |||||| |||||||||| || |||||||||  ||||| |||||||||||| |  |||||| ||||||||||| |||||||| |||||| || ||||||||    
T  3860829 gttttgtgtcaatttttaacttgaaatcacatctctttatctttttctctttgtttcaatataaataagtga-ttttcacatagatcttgg-tttttctt 3860926  T
Q  557 cgtgatttc 565  Q
    |||||||||    
T  3860927 cgtgatttc 3860935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 658
Target Start/End: Complemental strand, 24069528 - 24069425
Alignment:
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||||||||| ||  | ||||| || | ||||||||| || ||||| ||||| || |||||||||  |||||||||||||||||| |||||||||||||    
T  24069528 ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatatt 24069429  T
Q  655 gaaa 658  Q
    ||||    
T  24069428 gaaa 24069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 1100963 - 1100859
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcg 558  Q
    |||||||||| |||||||| |||| ||| | |||||||||||||||||||| |||||| | || |||||||||||  || | ||||| ||||||||||||    
T  1100963 tttgggtcaaattttgacccgaaaccactcatcttcatctttttctctctatttcaattttaacaagtgattttt-gcatatatcta-gttttttcttcg 1100866  T
Q  559 tgatttc 565  Q
    |||||||    
T  1100865 tgatttc 1100859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 658
Target Start/End: Original strand, 5546277 - 5546437
Alignment:
Q  498 tttttctctctaattcaatctaaataagtgatttttcacacagatct-aggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtc 596  Q
    |||||||||||| |||||||||||||||||| |||||||| | || | || |||||||||||| ||||||||  |  | ||| |   |||||| ||  ||    
T  5546277 tttttctctctatttcaatctaaataagtga-ttttcacataaatttaagtttttttcttcgtcatttcgtcgtctcaatgttgcattgtgttattcatc 5546375  T
Q  597 gtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||| ||| || || |||||||| || ||||||||||||||| ||||| ||| ||||||||    
T  5546376 gtcttgtgcagtatcgtttgattttccatattgttgcggtgttaatttggttcttattgaaa 5546437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 568
Target Start/End: Complemental strand, 43369908 - 43369855
Alignment:
Q  514 aatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtc 568  Q
    ||||||||||||||||||| |||| |||| || ||||||||||||||||||||||    
T  43369908 aatctaaataagtgatttt-cacatagatataagttttttcttcgtgatttcgtc 43369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 589 - 684
Target Start/End: Original strand, 19560007 - 19560103
Alignment:
Q  589 tgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||| |||||||| ||||| ||  ||||||||| | | || |||  |||||||||||||||||||||||| ||  |||||||||||||||| |||||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagattgattattcaatcaaagatttgga 19560103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 659
Target Start/End: Complemental strand, 969588 - 969477
Alignment:
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    |||||||||||||||||| ||    || ||||| | ||||||||| |||||||| ||||| ||  ||||||||  ||| || ||||||||||  |||| |    
T  969588 ttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggt 969489  T
Q  648 tcatattgaaaa 659  Q
    ||||||||||||    
T  969488 tcatattgaaaa 969477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 532
Target Start/End: Complemental strand, 24351091 - 24351006
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatc--tttttctctctaattcaatctaaataagtgatttt 532  Q
    |||||||  |||| ||||||||||||||||  |||||||||| | ||||  |||||| || |  ||||||||||||||||||||||    
T  24351091 gaggggtgattttaggtcaatttttgacctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgatttt 24351006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 35132794 - 35132879
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt--ctctctaattcaatctaaataagtgatttt 532  Q
    |||||||  |||| ||||||||||||||||  |||||||||||| |||||||||  | || |  || |||||||||||||||||||    
T  35132794 gaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttcttttaatctaaataagtgatttt 35132879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 562
Target Start/End: Complemental strand, 1097770 - 1097698
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag-gttttttcttcgtgat 562  Q
    ||||||||||||| | |||| |||||| |||||||||| ||||| ||| ||||||||  |||||||||||||||    
T  1097770 tcttcatctttttttatctatttcaatttaaataagtg-ttttttacatagatctagttttttttcttcgtgat 1097698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 12539166 - 12539125
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacc 487  Q
    |||||||||| ||||| |||||||| ||||||||||||||||    
T  12539166 attgaggggtggtttttggtcaattcttgacctgaaatcacc 12539125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 19296721 - 19296774
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  19296721 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 19296774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 532
Target Start/End: Complemental strand, 19405001 - 19404917
Alignment:
Q  450 aggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc--tctaattcaatctaaataagtgatttt 532  Q
    |||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||| ||  | |  ||||||||||||||||| ||||    
T  19405001 aggggtggttttaggtcattttttgacctagaatcacccctctacatctttttttccttttctttcaatctaaataagtggtttt 19404917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Complemental strand, 37837706 - 37837653
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  37837706 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 37837653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 532
Target Start/End: Complemental strand, 1749389 - 1749306
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt-ctctctaattcaatctaaataagtgatttt 532  Q
    |||||||  |||| ||||||||||||||||  ||||||||  |||||||||||| | || |  ||||||||||||||||||||||    
T  1749389 gaggggtgattttaggtcaatttttgacctagaatcacccg-cttcatcttttttccctttctttcaatctaaataagtgatttt 1749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 458 - 533
Target Start/End: Complemental strand, 5078632 - 5078556
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttct-ctctaattcaatctaaataagtgattttt 533  Q
    |||| ||||| ||||||||||  |||||||||||| ||||||| ||| |  || ||| |||||||||||||||||||    
T  5078632 ttttaggtcattttttgacctagaatcacccctctgcatctttctctccattatttcgatctaaataagtgattttt 5078556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 505
Target Start/End: Original strand, 42978451 - 42978507
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc 505  Q
    ||||||| ||||| ||||| ||||||||||  ||||||| |||| ||||||||||||    
T  42978451 gaggggtggttttaggtcattttttgacctagaatcaccactctacatctttttctc 42978507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 8e-69; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 448 - 657
Target Start/End: Original strand, 34489116 - 34489327
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatcta--aataagtgatttttcacacagatcta 545  Q
    |||||||| ||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||||    
T  34489116 tgaggggtggtttttgatcaatttttgacttaaaatcacccctcttcatctttttctctctaattcaatatataaataagtgatttttcacatagatcta 34489215  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||  ||  ||||||||||| |||||||| ||||||||||||    
T  34489216 ggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttg 34489315  T
Q  646 attcatattgaa 657  Q
    ||||||||||||    
T  34489316 attcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 446 - 658
Target Start/End: Complemental strand, 23947528 - 23947317
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  23947528 attgaggggtggttttgggtcaattcttgacctgaaatcacccatcttcatcgttttctctctatttcaatctaaataagtga-ttttcacatagatcta 23947430  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||| | || ||||||||||||||||    
T  23947429 ggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttg 23947330  T
Q  646 attcatattgaaa 658  Q
    |||||||||||||    
T  23947329 attcatattgaaa 23947317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 17237495 - 17237259
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||| |||||||    
T  17237495 attgaggggtggttttgggtcaattcttgacatgaaatcacccctcttcatctttttctctatatttcaatctaaataagtta-ttttcacatagatcta 17237397  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    ||||||||||| ||||||||  || |  ||||||||||| ||||||| |||||||| ||||| |   || |||||||||| || ||||||||||||| ||    
T  17237396 ggttttttctttgtgatttcagcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttcatctg 17237297  T
Q  646 attcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    |||||| ||||| ||| |||||||||||||||| ||||    
T  17237296 attcattttgaagatcgattattcaatcaaagatttgg 17237259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 25064101 - 25064335
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  25064101 attgaggggtggttttgggtcaattcttgacctgaaatcacctctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 25064199  T
Q  546 gg--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||||    
T  25064200 ggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatt 25064299  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||||| ||| ||| ||||||||||||    
T  25064300 tgattcatattgaaagatcgattgttcaatcaaaga 25064335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 12652806 - 12653048
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  12652806 attgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta 12652904  T
Q  546 ggtttttt-----cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttc 640  Q
    | ||||||     ||| |||||||| ||| |  ||||||||||| |||||||  ||||||| ||||| ||  |||||||| || | ||  ||||||||||    
T  12652905 gattttttttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttc 12653004  T
Q  641 atttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  12653005 atttgattcatattgaaagatcgattattcaatcaaagatttgg 12653048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 458 - 678
Target Start/End: Complemental strand, 28635321 - 28635099
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatt-tttcacacagatctaggttttttctt 556  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||||| | || |||||| ||||||||||||| ||| ||| ||||||| |||||||||     
T  28635321 ttttgggacaatttttgacctcaaatcatccctcttcatatttttctttttatttcaatttaaataagtgattcttttacatagatctaagttttttcta 28635222  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
    |||||||||||||   |||||||| ||| ||||||| |||||||| | ||||||  ||||||||| ||||| ||||||||||||||||||||||||||||    
T  28635221 cgtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattga 28635122  T
Q  657 aa-atcaattattcaatcaaaga 678  Q
    || || |||||||||||||||||    
T  28635121 aagattaattattcaatcaaaga 28635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 451 - 684
Target Start/End: Original strand, 16419029 - 16419263
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| |||||| ||||||| || |||| ||||||||| |||||||||||||||||||| |||||||||||||||||| ||| |||| ||||||  ||||    
T  16419029 ggggtggttttgagtcaattcttaacctaaaatcacccatcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctttgttt 16419127  T
Q  551 ttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||| ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||||||||||||||| ||||    
T  16419128 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattc 16419227  T
Q  650 atattg-aaaatcaattattcaatcaaagaattgga 684  Q
    |||||| |||||| |||||||||||||||| |||||    
T  16419228 atattgaaaaatcgattattcaatcaaagatttgga 16419263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 447 - 676
Target Start/End: Complemental strand, 33543830 - 33543602
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccctctt-catctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||| |||||| |||| |||||||||||||||||| | |||| ||||||||||||| || |||||||||||||||| |||||||||| |||| ||    
T  33543830 ttgaggggtggttttgagtcagtttttgacctgaaatcactcatctttcatctttttctctatatttcaatctaaataagtaatttttcacatagattta 33543731  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
     |||||| |||||||||||||||| | || | ||||||||||||||| |||||||| ||||| ||  |||||||| | || |||||||||||||||||      
T  33543730 agttttt-cttcgtgatttcgtcatctgattatggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatt-- 33543634  T
Q  646 attcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||||||| ||| | ||||||||||||    
T  33543633 attcatattgaaagatcgactattcaatcaaa 33543602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 33740789 - 33740556
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||    
T  33740789 attgaggggtggtttttggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagattta 33740691  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||| ||| ||||||| ||||| || ||||| ||  ||| |||| ||||  |  ||||||||||||||    
T  33740690 ggtttttttctttgtgatttcatcatctaagtgtggcggtttgttgttcgtcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgttcattt 33740591  T
Q  645 gattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||| ||||||||| ||| ||||||||||| ||||    
T  33740590 gatttatattgaaagatcgattattcaatcgaaga 33740556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 4984788 - 4984540
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacaca----ga 541  Q
    |||||||||| |||||||||||||| ||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||||||| |||| |    ||    
T  4984788 attgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatatataga 4984691  T
Q  542 tctaggtttttt--------cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgc 633  Q
    ||||||||||||        ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||| ||  ||     
T  4984690 tctaggtttttttgtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtga 4984591  T
Q  634 ggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  4984590 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgg 4984540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 8496831 - 8497071
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  8496831 attgaggggtggttttgagtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 8496929  T
Q  546 gg---ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    ||   ||||||||| ||  |||| |||    |||| |||| | ||||||| ||| |||| ||||| ||  ||||||||| ||| ||  ||||||||||||    
T  8496930 ggtttttttttctttgtagtttcatcatttaagtgcggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcat 8497029  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||| ||| ||| |||||||||||| ||||    
T  8497030 ttgattcatattgaaagatcgattcttcaatcaaagatttgg 8497071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 458 - 683
Target Start/End: Original strand, 4468437 - 4468662
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||     
T  4468437 ttttgggtcaattcttgacatgaagtcacccctcttcatcttgttctctctatttcaatctaaataagtga-ttttcatatagatctaggttttttcttt 4468535  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||| |||    ||||||||||| |||| || |||||||| ||| | ||  |||||||| |||| ||  ||| |||||||||||||| ||||||||    
T  4468536 gtgatttcatcatataagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaa 4468635  T
Q  658 -aatcaattattcaatcaaagaattgg 683  Q
      ||| |||||||||||||||| ||||    
T  4468636 ggatcgattattcaatcaaagatttgg 4468662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 458 - 658
Target Start/End: Original strand, 25337448 - 25337648
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatctaggtttt-ttct 555  Q
    |||||| ||||||| | ||||||||| |||||| ||||||||||| |  || | |||||||||||||| ||||||| |||| | ||||||||||| ||||    
T  25337448 ttttggatcaatttcttacctgaaatgacccct-ttcatctttttatagtccatttcaatctaaataaatgatttt-cacataaatctaggtttttttct 25337545  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||  |||||||  ||||||||  ||| |||||||||||||||||||||||||||||    
T  25337546 tcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattg 25337645  T
Q  656 aaa 658  Q
    |||    
T  25337646 aaa 25337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 675
Target Start/End: Complemental strand, 8196612 - 8196388
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttt 550  Q
    |||| ||||||| ||| || ||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| |||    
T  8196612 gggtggttttggatcagttcttgacctaaaatcacccgtattcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttt 8196514  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    |||||| |||||||| |||    ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||||||||||     
T  8196513 tttctttgtgatttcatcatataagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattct 8196414  T
Q  651 tattgaaa-atcaattattcaatcaa 675  Q
    ||  |||| ||| |||||||||||||    
T  8196413 tacagaaagatcgattattcaatcaa 8196388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 458 - 683
Target Start/End: Complemental strand, 8028317 - 8028091
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct-aggttttttctt 556  Q
    ||||||||||||| |||| ||| ||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||| |||||| || |||||||||    
T  8028317 ttttgggtcaattattgatctggaatcaccccacttcatctttttctctctgtttcaatctaaataagtga-ttttcacatagatctaagtttttttctt 8028219  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
      ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||||||||  |  | |||||||||||||||||||||| |    
T  8028218 tatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcatcgtacggtgttcatttgattcatattaa 8028119  T
Q  657 aa-atcaattattcaatcaaagaattgg 683  Q
    || |||  ||||||||||||||| ||||    
T  8028118 aagatcggttattcaatcaaagatttgg 8028091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 451 - 684
Target Start/End: Original strand, 10228550 - 10228784
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta-ggtt 549  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||| | ||||| | ||    
T  10228550 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaataagtgactttt-acatatatctatgttt 10228648  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||| |||||||| |||    |||||| |||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||| ||||||||||| |||     
T  10228649 ttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttattt 10228748  T
Q  650 atattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||||||| ||  |||||||||||||||| |||||    
T  10228749 ctattgaaagattgattattcaatcaaagatttgga 10228784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 458 - 683
Target Start/End: Original strand, 12165719 - 12165943
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |  ||| |||||||||||||||||| |||||||| |||| |||||||||||||     
T  12165719 ttttgggtcaattattgacctgaaatcactcctcttcatctttttatgcctatttcaatctaaataagtga-ttttcacatagatttaggttttttcttt 12165817  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    ||| |||  ||| |  ||||||||||| ||||||| |||||||| ||||| ||  || |||||| ||| || ||||||||||||||| ||||||||||||    
T  12165818 gtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttcgatttcacgt-ttcttgcggtgttcatttaattcatattgaa 12165916  T
Q  658 a-atcaattattcaatcaaagaattgg 683  Q
    | ||  ||||||||||| |||| ||||    
T  12165917 agattgattattcaatcgaagatttgg 12165943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 7881314 - 7881075
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| |||||| ||||| ||||||||||  ||||||||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  7881314 attgaggggtggttttggatcaattattgacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatcta 7881216  T
Q  546 ggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    | ||||||  ||| |  ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||| || | ||  ||||||||||| |    
T  7881215 gattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaat 7881116  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||    
T  7881115 tgattcatattgaaagatcgattgttcaatcaaagatttgg 7881075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 4088325 - 4088564
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttca-tctttttctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||| | ||||| |||||| | |||||||||||||||| |||||||| ||||||    
T  4088325 attgaggggtggttttgggtcaattcttgacctgaaatcacccatcttcattttttttatctctattacaatctaaataagtga-ttttcacatagatct 4088423  T
Q  545 ag-gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  |||||||||  ||||||| ||| |  ||||||||||| |||||||  ||||||| ||||| ||  ||||||||||||| ||  |||| ||||||||    
T  4088424 agttttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatt 4088523  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||| ||  |||| ||| ||| |||||||||||| ||||    
T  4088524 tgattcttacagaaagatcgattgttcaatcaaagatttgg 4088564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 496 - 684
Target Start/End: Original strand, 35001506 - 35001695
Alignment:
Q  496 tctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttg 594  Q
    |||||||||||||| || ||||||||||||||| |||| ||| ||||||| ||||||| ||| |||||||| ||| |  ||||||||||| ||||||| |    
T  35001506 tctttttctctctattttaatctaaataagtgactttt-acatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 35001604  T
Q  595 tcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||||| ||||| ||  |||| |||||||| || ||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||    
T  35001605 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcaattattcaatcaaagatttgga 35001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 7876256 - 7876017
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| |||||| ||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  7876256 attgaggggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatcta 7876158  T
Q  546 ggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    | ||||||  ||| |  ||||| ||| |  ||||||||| | ||||||| |||||||| ||||  ||  |||||||| || | ||  ||||||||||| |    
T  7876157 gattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaat 7876058  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||| ||| ||| ||| |||||||||||| ||||    
T  7876057 tgattcatattaaaagatcgattgttcaatcaaagatttgg 7876017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 684
Target Start/End: Complemental strand, 4352189 - 4351968
Alignment:
Q  469 tttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatctaggtttttt-----cttcgtgat 562  Q
    ||||| |||||||||||||| ||||||| |||||||  || | ||||||| |||||||||||||| || | |||| ||| ||||||     |||||||||    
T  4352189 ttttttacctgaaatcacccatcttcatatttttctagtcaatttcaatccaaataagtgatttt-catatagatttagtttttttgtcttcttcgtgat 4352091  T
Q  563 ttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atc 661  Q
    ||||||| |||||||||||| ||||||||| ||||||||||| || ||  |||||||||||||  || |||||| ||||||| ||||||||||||| |||    
T  4352090 ttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgtggcgttatttgatttcccgtcatggtgcggtattcatttaattcatattgaaagatc 4351991  T
Q  662 aattattcaatcaaagaattgga 684  Q
     |||||| ||||||||| |||||    
T  4351990 gattatttaatcaaagatttgga 4351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 565
Target Start/End: Original strand, 33109700 - 33109818
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||||||||||||||||||| |||||  || ||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  33109700 attgacgggtggttttgggtcaatttttgacctaaaatcgtccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 33109798  T
Q  546 ggttttttcttcgtgatttc 565  Q
    ||||||||||| ||||||||    
T  33109799 ggttttttctttgtgatttc 33109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 577 - 678
Target Start/End: Original strand, 33110608 - 33110710
Alignment:
Q  577 gtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaa 675  Q
    |||||||| |||||||  ||||||| ||||||||  ||||||||| ||| ||  |||||||||||||||||||||||| ||| ||| |||||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaa 33110707  T
Q  676 aga 678  Q
    |||    
T  33110708 aga 33110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 553
Target Start/End: Original strand, 17334647 - 17334747
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| ||||||| || ||| |||| |||||||||||  ||||||||||||||| | || |||||||||||||||||| |||||||| ||||||| |||||    
T  17334647 gggtggttttggatcgattcttgatctgaaatcaccaatcttcatctttttctgtttatttcaatctaaataagtga-ttttcacatagatctaagtttt 17334745  T
Q  552 tt 553  Q
    ||    
T  17334746 tt 17334747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 584 - 658
Target Start/End: Complemental strand, 26588577 - 26588503
Alignment:
Q  584 tgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||| |||||||||| ||||| ||  ||||||||||||| |||||||||||||| |||| ||||||||||||    
T  26588577 tgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaa 26588503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 490 - 533
Target Start/End: Original strand, 8266545 - 8266588
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgattttt 533  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8266545 tcttcatctttttctctctacttcaatctaaataagtgattttt 8266588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 553
Target Start/End: Complemental strand, 5582831 - 5582757
Alignment:
Q  478 tgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt 553  Q
    |||||||||| |||||||||||||||| | || || ||||||||||| ||| |||||| | ||||||| |||||||    
T  5582831 tgaaatcaccactcttcatctttttctttatattttaatctaaataaatga-ttttcaaatagatctaagtttttt 5582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 564
Target Start/End: Original strand, 13436705 - 13436770
Alignment:
Q  498 tttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgattt 564  Q
    |||||||||||| |||||| ||||||||||| |||||||| | |||||  |||||| ||||||||||    
T  13436705 tttttctctctatttcaatttaaataagtga-ttttcacataaatctatattttttattcgtgattt 13436770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 23128460 - 23128514
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||| ||||||| ||||| ||||||||||  |||||||||||| ||||||||||    
T  23128460 gagggatagttttaggtcattttttgacctagaatcacccctctacatctttttc 23128514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 523
Target Start/End: Complemental strand, 23217190 - 23217124
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaata 523  Q
    ||||||||||||| ||||||  |||||||||  || ||||| ||||||||||| |||||| ||||||    
T  23217190 gttttgggtcaatatttgactcgaaatcacctttcgtcatcattttctctctatttcaatttaaata 23217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 532
Target Start/End: Complemental strand, 9508921 - 9508841
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttt 532  Q
    ||||| ||||||| |||||||| ||||   |||||||  |||||  |||||||| | |||||||||||||||||||||||||    
T  9508921 ggggtggttttggatcaatttt-gacccataatcaccattcttccactttttctttttaattcaatctaaataagtgatttt 9508841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 12170337 - 12170390
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  12170337 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 12170390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 564
Target Start/End: Original strand, 25398442 - 25398547
Alignment:
Q  456 agttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttct 555  Q
    |||||| | ||||||||||||| ||||||   | ||||||||||||| ||| |   ||||||||||||||||| |||| ||  |||||||||  ||||||    
T  25398442 agtttttgatcaatttttgacccgaaatcgttcatcttcatctttttatctttgtctcaatctaaataagtga-ttttaacgtagatctagg--ttttct 25398538  T
Q  556 tcgtgattt 564  Q
    |||||||||    
T  25398539 tcgtgattt 25398547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 31296848 - 31296880
Alignment:
Q  627 ttgttgcggtgttcatttgattcatattgaaaa 659  Q
    ||||||| |||||||||||||||||||||||||    
T  31296848 ttgttgcagtgttcatttgattcatattgaaaa 31296880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 3e-65; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 478 - 683
Target Start/End: Original strand, 39987292 - 39987497
Alignment:
Q  478 tgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtg 577  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||  || |||||||    
T  39987292 tgaaatcacctctcttcatctttttctctctgattcaatctaaataagtgatttttcatatagatctag-ttttttcttcgtgatttcaccatccgagtg 39987390  T
Q  578 tggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||| ||||| |||||||| ||||| ||  |||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  39987391 tggtggtgtattgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatcgattattcaatcaaa 39987490  T
Q  677 gaattgg 683  Q
    |||||||    
T  39987491 gaattgg 39987497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 446 - 672
Target Start/End: Complemental strand, 18569521 - 18569294
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||||||||||||  |||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  18569521 attgaggggtggttttgggtcaatttttgacaagaaatcacctgtcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta 18569423  T
Q  546 ggtttt-ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |||||| ||||||||||||||||||   |||||||||||||||||||| ||| |||| | ||||||  || |||||||||| ||||||||||||||||||    
T  18569422 ggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcattt 18569323  T
Q  645 gattcatattgaaa-atcaattattcaat 672  Q
     ||||||||||||| ||| ||||||||||    
T  18569322 aattcatattgaaagatcgattattcaat 18569294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 28035009 - 28035247
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||| ||| |||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  28035009 attgagaggtggttttgggtcaattattgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta 28035107  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  | ||||||||||||    
T  28035108 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcattt 28035207  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| |||||||||||||||| ||||    
T  28035208 gattcatattgaaagatcgattattcaatcaaagatttgg 28035247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 51868856 - 51868617
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  51868856 attggggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatcta 51868758  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||| ||| || |||||||||||||||    
T  51868757 ggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattt 51868658  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||| |||||||| ||| |||||||||||||||| |||||    
T  51868657 tattcttattgaaagatcgattattcaatcaaagatttgga 51868617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 458 - 683
Target Start/End: Complemental strand, 5324756 - 5324531
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||  | || || |||||| |||     
T  5324756 ttttgggtcaattcttgacctggaatcacctctcttcatctttttctctctatttcaatctaaataagtga-ttttcacgtaaatttaagtttttccttt 5324658  T
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg-a 656  Q
    |||||||| ||| |  ||||||||||| ||||||| | |||||| |||||| |  ||||||||||||| || |||||||||||||||||||||||||| |    
T  5324657 gtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattgaa 5324558  T
Q  657 aaatcaattattcaatcaaagaattgg 683  Q
    ||||| |||||||||||||||| ||||    
T  5324557 aaatcgattattcaatcaaagatttgg 5324531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 458 - 678
Target Start/End: Complemental strand, 25406483 - 25406262
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttctt 556  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||| |||||||||    
T  25406483 ttttgggtcaattcttgacctgaaatcacacctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttttctt 25406385  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
     |||||||||||| |  ||||||||||| | ||||| |||||||| || || ||  |||| |||||||| || ||||||||||||||| |||| ||||||    
T  25406384 tgtgatttcgtcatctaagtgtggtggtttattgttcgtcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattga 25406285  T
Q  657 aa-atcaattattcaatcaaaga 678  Q
    || ||| ||||||||||||||||    
T  25406284 aagatcgattattcaatcaaaga 25406262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 451 - 676
Target Start/End: Original strand, 51871739 - 51871964
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||| |||    
T  51871739 ggggtggttttgggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctagcttt 51871837  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    |||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||  ||  |||| ||| |||| || ||||||||||||||| ||||     
T  51871838 tttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattct 51871937  T
Q  651 tattgaaa-atcaattattcaatcaaa 676  Q
    |||||||| ||| ||||||||||||||    
T  51871938 tattgaaagatcgattattcaatcaaa 51871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 40881224 - 40880986
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||| | |||||||||||||| ||||||| ||||||| | |||||||||||||||||||| |||||||||||| ||||||||| |||  |||||||    
T  40881224 attgagggatggttttgggtcaattcttgacctaaaatcactcatcttcatctttttctctctatttcaatctaaatgagtgatttt-cacttagatcta 40881126  T
Q  546 ggttttttcttcgtga--tttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |||||||| ||  |||  |||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||||    
T  40881125 ggttttttttttttgagatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatt 40881026  T
Q  644 tgattcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    ||||||||||| |||||| |||||||||||||||| ||||    
T  40881025 tgattcatattaaaaatcgattattcaatcaaagatttgg 40880986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 30818556 - 30818329
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| | |||||    
T  30818556 attgaggggtagttttgggtcaattattgacctgaaatcacccatcttcatctttttctctctatttcaatctaaataagtga-ttttcacataaatcta 30818458  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgt-attgttgcggtgttcattt 644  Q
    | |||||| || |||||||| ||| |  ||||||||||| ||||||| ||||||||     ||||  |||||| |||||| |||| ||||||||||||||    
T  30818457 gtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtctt-----gtgttgtttgatctcccgtcattg-tgcggtgttcattt 30818364  T
Q  645 gattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||| ||| |||| ||| ||||||||||||||||    
T  30818363 gattcttatcgaaagatcgattattcaatcaaaga 30818329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 7342592 - 7342831
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||| |||| ||  |||||||    
T  7342592 attggggggtggttttgggtcaatttttgacctgaaatcacccctcttcatatttttttatctatttcaatctaaataagtgactttt-acgtagatcta 7342690  T
Q  546 -ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
     | ||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||||| |||||||||    
T  7342691 tgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgttttcccgtcttcttgcgttgttcattt 7342790  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||| |||||||| ||| |||||||||||||||| |||||    
T  7342791 tattcctattgaaagatcgattattcaatcaaagatttgga 7342831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 5701127 - 5701367
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||   |||||||||||  ||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||| |||||||    
T  5701127 attgaggggtgactttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatttcaatttaaataagtga-ttttcacatagatcta 5701225  T
Q  546 gg---ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    ||   ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||||||||||||    
T  5701226 ggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcat 5701325  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||||| ||| ||| |||||||||||| ||||    
T  5701326 ttgattcatattgaaatatcgattgttcaatcaaagatttgg 5701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 7312309 - 7312077
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||| |||||  ||||||| ||| |||||||  |||||||    
T  7312309 attgaggggtagttttgggtcaatttttgacctaaaattacttctcttcatctttttctctctatttcaaattaaataaatga-ttttcacgtagatcta 7312211  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||  | |||||     ||||  |||||||| |||| |||||||||||||||||||    
T  7312210 ggttttttcttcgtgatttcgt-atctaagtgtggtggtgtgttgttcattgtctt-----gtgttgtttgattttccgtcttgttgcggtgttcatttg 7312117  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||||||||||| ||| || |||||| |||||| |||||    
T  7312116 attcatattgaaagatcgataattcaaacaaagatttgga 7312077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 9172358 - 9172599
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||  ||||||| |||||||    
T  9172358 attggggggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataagtga-ctttcacatagatcta 9172456  T
Q  546 gg-ttttttctt--cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    || |||||||||   |||||||  ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || |||||||||||||    
T  9172457 ggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcat 9172556  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    || |||| |||||||| ||| |||||||||||||||| |||||    
T  9172557 tttattcctattgaaagatcgattattcaatcaaagatttgga 9172599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 684
Target Start/End: Original strand, 9180340 - 9180581
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||  ||||||| |||||||    
T  9180340 attggggggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataagtga-ctttcacatagatcta 9180438  T
Q  546 gg-ttttttctt--cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    || |||||||||   |||||||  ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || |||||||||||||    
T  9180439 ggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcat 9180538  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    || |||| |||||||| ||| |||||||||||||||| |||||    
T  9180539 tttattcctattgaaagatcgattattcaatcaaagatttgga 9180581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 50272351 - 50272113
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatct- 544  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||||| | |||||||| ||||||     
T  50272351 attgaagggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagt-aattttcacatagatcta 50272253  T
Q  545 aggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||  |  ||| ||||| | ||||||| ||||| || ||||| ||  ||||||||||||| ||  ||||||||||||||    
T  50272252 agtttttttctttgtgatttcatcttctaagtttggtgatttgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcattt 50272153  T
Q  645 gattcatattg-aaaatcaattattcaatcaaagaattgg 683  Q
    ||||||||||| |||||| |||||||||||||||| ||||    
T  50272152 gattcatattgaaaaatcgattattcaatcaaagatttgg 50272113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 457 - 683
Target Start/End: Original strand, 14545401 - 14545625
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    |||||| ||||||| ||||||||||||||| | ||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||    
T  14545401 gttttgtgtcaattcttgacctgaaatcactcatcttcatctttttctctatatttcaatctaaataagtga-ttttcacatagatctaggttttttctt 14545499  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
     |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||  |   ||||| ||||||| || ||||||||||||| ||||| || ||||    
T  14545500 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgctgtttga-ttcccgtcttcttgcggtgttcatctgatttattttga 14545598  T
Q  657 aaatcaattattcaatcaaagaattgg 683  Q
    | ||| |||||||||||||||| ||||    
T  14545599 agatcgattattcaatcaaagatttgg 14545625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 33291630 - 33291391
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt-ctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| || |||| |||||| ||||||||||||||| |||| | ||||    
T  33291630 attgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcattttttttctttctatttcaatataaataagtgatttt-cacataaatct 33291532  T
Q  545 aggtttttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    | ||||||| ||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  |||||||| ||||  |  |||||||||||||    
T  33291531 atgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatt 33291432  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| || | | ||||||||||||| ||||    
T  33291431 tgattcatattgaaagataagtaattcaatcaaagatttgg 33291391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 451 - 676
Target Start/End: Complemental strand, 38520739 - 38520511
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| ||||||| ||||||||| |||||||||||| | |||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||| ||||    
T  38520739 ggggtggttttggatcaattttttacctgaaatcactcatcttcatctttttctctctatttcgatctaaataagtgatttt-cacatagatctatgttt 38520641  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtc---ttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||||||||||||| ||| |  || |||||||| ||||||| ||||||   || || || ||  |||||||||||||||| || |||||||||| ||||    
T  38520640 tttcttcgtgatttcatcatctaagagtggtggtttgttgttcgtcgtcgtcttgtgtggcgttgtttgatttcccgtattcttacggtgttcatctgat 38520541  T
Q  648 tcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||||| ||| |||||| |||||||    
T  38520540 tcatattgaaagatcgattattaaatcaaa 38520511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 448 - 683
Target Start/End: Original strand, 7997659 - 7997897
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg 547  Q
    |||||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||| |||||||||    
T  7997659 tgaggggtggttttgggttaatttttgatctgaaatcacccttcttcatctttttctctttatttcaatataaataagtga-ttttcacatagatctagg 7997757  T
Q  548 ---ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
       ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||| ||||||||||    
T  7997758 tttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcattt 7997857  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| ||| ||||| |||||| ||||    
T  7997858 gattcatattgaaatatcgattgttcaaccaaagatttgg 7997897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 452 - 678
Target Start/End: Original strand, 27872615 - 27872841
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||| ||||||| |||||    
T  27872615 gggtggttttgggtcaatttttgacatgaaatcacccatcttcatctttttcgctctatttcaatctaaataagtga-ttttcacatagatctaagtttt 27872713  T
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    |||||||||||| | ||| |  ||||||||||| ||||||| |||||||| | ||  ||  ||||||||   || || ||||||||||||||| |||||     
T  27872714 ttcttcgtgattgcatcatctaagtgtggtggtttgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattcaa 27872813  T
Q  652 attgaa-aatcaattattcaatcaaaga 678  Q
    ||||||  ||| |||||||||| |||||    
T  27872814 attgaaggatcgattattcaattaaaga 27872841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 451 - 684
Target Start/End: Complemental strand, 50166305 - 50166071
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-tt 549  Q
    ||||| |||||||||||||| ||||||||||||  |||||||| |||||||||| |||| ||||||||||||||||||  ||||||| |||| |||| ||    
T  50166305 ggggtggttttgggtcaattattgacctgaaattgcccctctttatctttttctatctatttcaatctaaataagtga-atttcacatagatttaggttt 50166207  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||  |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||| ||| || ||||||||||||||| ||||    
T  50166206 ttttctatgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattc 50166107  T
Q  650 atattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||||||| ||| |||||||||||||||| |||||    
T  50166106 ctattgaaagatcgattattcaatcaaagatttgga 50166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 454 - 658
Target Start/End: Complemental strand, 39927758 - 39927553
Alignment:
Q  454 gtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatctaggttttt 552  Q
    |||||||| ||||||||||| || |||||||||  ||||||||||| || |  |||| |||||||||||||| | ||||| || | |||||||| |||||    
T  39927758 gtagtttttggtcaatttttaacatgaaatcacttctcttcatcttgttatagtctatttcaatctaaataaataatttt-cagatagatctagattttt 39927660  T
Q  553 t-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    | |||||||||||||||| |||||||||||||||||||||| |||||||| || || ||  ||||||||||||| ||||||||||||||||||| |||||    
T  39927659 ttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcat 39927560  T
Q  652 attgaaa 658  Q
    |||||||    
T  39927559 attgaaa 39927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 11453805 - 11454038
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctct--aattcaatctaaataagtgatttttcacacagatc 543  Q
    |||||||| | ||||  |||||||||||||| ||||||||| | |||||||||||||||||||  | ||||||||||||||||| |||| |||| |||||    
T  11453805 attgagggatggtttctggtcaatttttgacttgaaatcactc-tcttcatctttttctctctctatttcaatctaaataagtggtttt-cacatagatc 11453902  T
Q  544 taggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||||||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||| | |   ||||||||||||| || ||||||| ||||||    
T  11453903 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattcatt 11454002  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||| |||||| | | ||||||||||||||||    
T  11454003 tgattcatcttgaaagagcgattattcaatcaaaga 11454038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 482 - 678
Target Start/End: Original strand, 9919295 - 9919492
Alignment:
Q  482 atcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta-ggttttttcttcgtgatttcgtcacccgagtgtgg 580  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||  || |  |||||||    
T  9919295 atcacccctcttcatctttttctctctatttcaatctaaataagtgattttt-acatagatctatgtttttttctttgtgatttcaccatctaagtgtgg 9919393  T
Q  581 tggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||| ||||||| |||||||| | ||| ||  |||| |||||||| || ||||||||||||||| |||| |||||||| ||| ||||||||||||||||    
T  9919394 tggtttgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaaga 9919492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 457 - 683
Target Start/End: Original strand, 3871289 - 3871516
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccc-tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttct 555  Q
    ||||||||| |||| |||| ||||||||||||| | ||||||||| |||||| | |||||||||||||||||||||| |||| ||||||| |||||||||    
T  3871289 gttttgggttaattcttgatctgaaatcacccccttttcatctttctctctcaatttcaatctaaataagtgatttt-cacatagatctaagttttttct 3871387  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcata-tt 654  Q
    | |||||||| ||| |  ||||||||||| ||||||| |||||||| ||| | ||  ||||||||||||| || ||||||||||| ||||||| ||| ||    
T  3871388 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc-tttgatttatattt 3871486  T
Q  655 gaaa-atcaattattcaatcaaagaattgg 683  Q
    |||| ||| |||||||||||||||| ||||    
T  3871487 gaaagatcgattattcaatcaaagatttgg 3871516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 497 - 684
Target Start/End: Original strand, 34519054 - 34519241
Alignment:
Q  497 ctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtc 596  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||  ||||||| ||| |  ||||||||||| ||||||| |||    
T  34519054 ctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtc 34519152  T
Q  597 gtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    || || ||||| ||  ||||||||| ||| || ||| ||||||||||||||||||||||||| ||| ||||||||||||| || |||||    
T  34519153 gttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgga 34519241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 451 - 683
Target Start/End: Original strand, 20266177 - 20266410
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag-gtt 549  Q
    ||||| |||||||||||||| |||| || ||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||  ||    
T  20266177 ggggtggttttgggtcaattcttgatctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagcttt 20266275  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| || ||  |  ||||||||||||| ||  |||||||  ||||||||||    
T  20266276 ttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattc 20266375  T
Q  650 atattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||| ||| ||| |||||||||||| ||||    
T  20266376 atattgaaagatcgattgttcaatcaaagatttgg 20266410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 446 - 676
Target Start/End: Original strand, 30878945 - 30879176
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||| || || ||||||||||||||||||| |||| |||||||    
T  30878945 attgaggggtggttttgggtcaatttttgacctgagatcatctctcttcatctttttctctttattttaatctaaataagtgatttt-cacatagatcta 30879043  T
Q  546 ggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
     |||||||  ||| || ||||| |||    ||||||||| | ||||||| |||||||| ||||  ||  |||||||| |||| ||  |||||||||||||    
T  30879044 tgttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcgc-gttgtttgattttccgtcttcgtgcggtgttcatt 30879142  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||||||||| ||| ||| ||||||||||    
T  30879143 tgattcatattgaaagatcgattgttcaatcaaa 30879176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 446 - 676
Target Start/End: Complemental strand, 35584832 - 35584598
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  ||||||||||||| || |||||||||||| | ||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  35584832 attgaggggtgattttgggtcaattcttaacctgaaatcactcatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 35584734  T
Q  546 gg----ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
    ||    ||||||||| || ||||  | | |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||| |||| ||  |||||||||||    
T  35584733 ggttttttttttctttgtaattttataatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 35584634  T
Q  642 tttgattcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||||||||||| ||| ||| ||||||||||    
T  35584633 tttgattcatattgaaagatcgattgttcaatcaaa 35584598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 462 - 676
Target Start/End: Complemental strand, 41081899 - 41081683
Alignment:
Q  462 gggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtg 560  Q
    ||||||||||||||||||||||||| | |||||||||||||||  || | ||||||||| |||||||||||  | || |||||||||||||||| |||||    
T  41081899 gggtcaatttttgacctgaaatcactcatcttcatctttttctagtccatttcaatctatataagtgatttg-cgcatagatctaggttttttcatcgtg 41081801  T
Q  561 atttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-- 658  Q
    | ||||||| ||||||||||||||||||||||  ||| ||| ||||| ||  ||| |||||  |  ||||||| |||||||| |||||||||||||||      
T  41081800 acttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgttgtttaatttcatgccttgttgcagtgttcatatgattcatattgaaaag 41081701  T
Q  659 atcaattattcaatcaaa 676  Q
    ||| ||||||||||||||    
T  41081700 atcgattattcaatcaaa 41081683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 451 - 676
Target Start/End: Complemental strand, 45426268 - 45426046
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttt 550  Q
    ||||| |||||||||||||| ||||  ||||||||||  | |||||||||||||||||| || ||||||||||||||| |||||||| ||||||| ||||    
T  45426268 ggggtggttttgggtcaattcttgatttgaaatcacctattttcatctttttctctctatttaaatctaaataagtga-ttttcacatagatctaagttt 45426170  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    |   || |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  ||||||||||| |  |  ||||||||||||||||||||    
T  45426169 t---tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttcatttgattca 45426073  T
Q  651 tattgaaa-atcaattattcaatcaaa 676  Q
    ||| |||| ||| ||||||||||||||    
T  45426072 tatcgaaagatcgattattcaatcaaa 45426046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 19716107 - 19715868
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||| |||| ||    
T  19716107 attgagaggtggttttgggtcaattcttgatctgaaatcaccc-tcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagattta 19716010  T
Q  546 ggttttttcttc----gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
    |||||||| ||     || ||||| ||| |  ||||||||| | ||||||| |||||||| ||| | ||  ||||||||||||| ||  |||||||||||    
T  19716009 ggttttttttttcattgtaatttcatcatctaagtgtggtgat-tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttca 19715911  T
Q  642 tttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||||| ||| ||| || ||||||||| ||||    
T  19715910 tttgattcatattgaaagatcgattgttaaatcaaagatttgg 19715868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 451 - 678
Target Start/End: Original strand, 44637297 - 44637524
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc-tctctaattcaatctaaataagtgatttttcacacagatctaggtt 549  Q
    ||||| |||||||||||||||| ||| | |||||||| ||||||||||||||  ||| || |||||||||||||||||||||| |||  ||||||| |||    
T  44637297 ggggtggttttgggtcaatttt-gacataaaatcacctctcttcatcttttttatctttatttcaatctaaataagtgatttt-cacgtagatctaagtt 44637394  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    | ||||| |||||||||||| |  | ||||||| ||||||||| || ||||| ||||  ||  |||| |||||||| ||||| |||||||||||||||||    
T  44637395 tcttctttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattc 44637494  T
Q  650 atattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||| ||||| ||||  ||||||||    
T  44637495 atattgaaagatcaaatattacatcaaaga 44637524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 625
Target Start/End: Original strand, 19723209 - 19723382
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcat-ctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-tt 549  Q
    |||| |||||||||||||| ||||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||    
T  19723209 gggtggttttgggtcaattattgacttgaaatcacctctcttcatattttttctctct-attcaatctaaataagtga-ttttcacatagatctaggttt 19723306  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgt 625  Q
    ||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| ||||    
T  19723307 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgattttccgt 19723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 452 - 553
Target Start/End: Complemental strand, 25728164 - 25728064
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||||||||    
T  25728164 gggtggttttgggtcaattcttgacctgaaatcactcctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttt 25728066  T
Q  552 tt 553  Q
    ||    
T  25728065 tt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 678
Target Start/End: Complemental strand, 48365956 - 48365743
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| |||||||||||||||||||  ||||||||||  |||||||||||||||||||  ||||| |||||              || |||||||||||||    
T  48365956 gggtggttttgggtcaatttttgaaatgaaatcacctatcttcatctttttctctctgtttcaaactaaa--------------cagagatctaggtttt 48365871  T
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    |||||||||||||||||| | |||||||||||||||||||| ||| |||| |||   ||  ||||||||   || |||| ||||||||||||||||||||    
T  48365870 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttgattcat 48365771  T
Q  652 attgaa-aatcaattattcaatcaaaga 678  Q
    ||||||  ||| ||||||||||||||||    
T  48365770 attgaaggatcgattattcaatcaaaga 48365743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 515 - 678
Target Start/End: Original strand, 31836745 - 31836910
Alignment:
Q  515 atctaaataagtgatttttcacacagatctaggtttttt--cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtct 612  Q
    |||||||||||||||||| |||| |||||||||||||||  ||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||||||      
T  31836745 atctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttg 31836843  T
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattg-aaaatcaattattcaatcaaaga 678  Q
    ||||||||||||| ||  ||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  31836844 tttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattgttcaatcaaaga 31836910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 50148242 - 50148473
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| | || ||||||||| || |||||||| |||||||| || || ||||||||||||||| |||||||| |||||||    
T  50148242 attgaggggtggttttgggtcaattctagatctgaaatcatccatcttcatccttttctctttattttaatctaaataagtga-ttttcacatagatcta 50148340  T
Q  546 gg---ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcat 642  Q
    ||   ||||||||| || ||||| ||  |  ||||||||| | ||    |||||||||| ||||   |  ||||||||||||| ||  ||||||||||||    
T  50148341 ggtttttttttctttgtaatttcatcttctaagtgtggtgatttg----ttgtcgtcttgtgcgacattgtttgatttcccgtcttcgtgcggtgttcat 50148436  T
Q  643 ttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||||||| ||| ||| ||||||||||||    
T  50148437 ttgattcatattgaaagatcgattgttcaatcaaaga 50148473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 446 - 553
Target Start/End: Original strand, 40646558 - 40646664
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||| ||||||| | ||||||||||||||| | || |||||||||||||||||| |||||||  |||||||    
T  40646558 attgaggggtggttttgggtcaattcttgacctaaaatcactcatcttcatctttttctatttatttcaatctaaataagtga-ttttcacgtagatcta 40646656  T
Q  546 ggtttttt 553  Q
    ||||||||    
T  40646657 ggtttttt 40646664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 552 - 683
Target Start/End: Complemental strand, 9687309 - 9687177
Alignment:
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    ||||| |||||||| ||| |  ||||||||||| ||||||| ||| |||| ||||| ||  ||||||||||| | || ||||||||||||||||||||||    
T  9687309 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcat 9687210  T
Q  652 attgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||| ||| |||||||||||||||| ||||    
T  9687209 attgaaagatcgattattcaatcaaagatttgg 9687177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 451 - 528
Target Start/End: Complemental strand, 45806015 - 45805938
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtga 528  Q
    ||||| ||||||||||||||||||| |||||||||||  ||||| |||||||||||||| ||||||||||||||||||    
T  45806015 ggggtggttttgggtcaatttttgatctgaaatcacctttcttcctctttttctctctatttcaatctaaataagtga 45805938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 574 - 676
Target Start/End: Complemental strand, 33817263 - 33817161
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| | |||||||||||||||||| | ||  ||||||||| ||| || || |||||||||||||||||||||||||| ||| ||||||||||    
T  33817263 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgattattcaat 33817165  T
Q  673 caaa 676  Q
    ||||    
T  33817164 caaa 33817161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 574 - 676
Target Start/End: Complemental strand, 33876733 - 33876631
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| | |||||||||||||||||| | ||  ||||||||| ||| || || |||||||||||||||||||||||||| ||| ||||||||||    
T  33876733 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgattattcaat 33876635  T
Q  673 caaa 676  Q
    ||||    
T  33876634 caaa 33876631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 30558823 - 30558748
Alignment:
Q  488 cctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttc 565  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||  ||||||||||||||||||||||||||  |||||||    
T  30558823 cctcttcatatttttctttctatttcaatctaaaaaagtga--tttcacacagatctaggttttttctttatgatttc 30558748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 531
Target Start/End: Original strand, 16161676 - 16161760
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcat-ctttttct-ctctaattcaatctaaataagtgattt 531  Q
    |||||||| |||| ||||||||||||||||  ||||||| ||||||||  ||||||| || || |||||||||||||||||||||    
T  16161676 gaggggtaattttaggtcaatttttgacctagaatcacctctcttcatattttttctcctttatttcaatctaaataagtgattt 16161760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 658
Target Start/End: Original strand, 47132861 - 47132964
Alignment:
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||||||||||||  | ||||| || | ||||||||| ||||| || ||||| ||  ||| ||||| ||| |||||||||||||| |||| ||||||||    
T  47132861 ttcgtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatatt 47132960  T
Q  655 gaaa 658  Q
    ||||    
T  47132961 gaaa 47132964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 578
Target Start/End: Complemental strand, 19052532 - 19052413
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    ||||||||| ||||||||||| ||||||| |  ||||||| ||||  |||||  |||| |||||||||||||| ||| | | ||||||| |||||||||     
T  19052532 gttttgggtaaatttttgacccgaaatcatcaatcttcatattttgttctctctttcagtctaaataagtgatattt-aaaaagatcta-gttttttctg 19052435  T
Q  557 cgtgatttcgtcacccgagtgt 578  Q
     |||||||||||  ||||||||    
T  19052434 tgtgatttcgtcgtccgagtgt 19052413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 659
Target Start/End: Original strand, 4396914 - 4397053
Alignment:
Q  520 aataagtgatttttcacacagatctaggttt-tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgat 618  Q
    ||||||||||||| || | | |||||||||| |||||| |||||||||||    ||||| |  | ||||||||||||||||||||| | | |  ||||||    
T  4396914 aataagtgatttt-catataaatctaggtttatttctttgtgatttcgtcgtttgagtgcgacgatgtgttgtttgtcgtcttatgtgatattgtttgat 4397012  T
Q  619 ttcccgtattgttgcggtgttcatttgattcatattgaaaa 659  Q
    ||| |||  ||||||| ||||| |||||||| |||||||||    
T  4397013 ttctcgtcatgttgcgatgttcctttgattcttattgaaaa 4397053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 592
Target Start/End: Complemental strand, 18650082 - 18649949
Alignment:
Q  458 ttttgggtcaatttttg-acctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    ||||||||||||||||  | |||||||||  |  ||| ||||||| ||||||| ||| |||||||||||| | |||||||| | || |||||||||| ||    
T  18650082 ttttgggtcaatttttttatctgaaatcatgcagctttatcttttcctctctatttcgatctaaataagt-aattttcacataaatataggtttttt-tt 18649985  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtt 592  Q
    |||||||| |||  | ||||  ||||||||||||||    
T  18649984 cgtgattttgtcgtctgagtccggtggtgtgttgtt 18649949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 34528578 - 34528645
Alignment:
Q  464 gtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgattt 531  Q
    |||| ||||||||||  |||||||||||| |||||||||| || |  ||| |||||||||||||||||    
T  34528578 gtcattttttgacctagaatcacccctctgcatctttttccctttctttcgatctaaataagtgattt 34528645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 658
Target Start/End: Original strand, 12635157 - 12635231
Alignment:
Q  584 tgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||||| |||||||| ||||| ||  ||||||||  ||| |||| | |||||||||||| ||||||||||||    
T  12635157 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaa 12635231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 659
Target Start/End: Original strand, 16262877 - 16262923
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaaa 659  Q
    ||||||||| ||| |||||| ||||||| ||||||||||||||||||    
T  16262877 tttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaa 16262923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 29738884 - 29738830
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||||| ||||| ||||||||||| ||||  |||||||||||| ||||||||||    
T  29738884 gaggggtggttttaggtcaattttttacctagaatcacccctctacatctttttc 29738830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 678
Target Start/End: Complemental strand, 45805872 - 45805806
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||| |||||||| || ||||||||||||||| ||||  ||||||| ||| ||||||||||||||||    
T  45805872 tttgctttcccgtcttcttgcggtgttcatttcattccgattgaaagatcgattattcaatcaaaga 45805806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 49626754 - 49626839
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt--ctctctaattcaatctaaataagtgatttt 532  Q
    ||||||| ||||| ||||| | |||||||| ||||||||||||| |||||||||  | || |  ||| ||||||||||||||||||    
T  49626754 gaggggtggttttaggtcattctttgacctaaaatcacccctctgcatcttttttcccctttctttctatctaaataagtgatttt 49626839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 613 - 658
Target Start/End: Original strand, 40646707 - 40646752
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||||||    
T  40646707 tttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaa 40646752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 3e-62; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 2808681 - 2808450
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||| |||||||    
T  2808681 attgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctatttctctctatttcagtctaaataagtga-ttttcacatagatcta 2808583  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    || |||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| ||||||| ||||| ||||||| ||    
T  2808582 gg-tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctg 2808484  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||| ||| ||||||||||||||||    
T  2808483 attcatattgaaagatcgattattcaatcaaaga 2808450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 459485 - 459252
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | |||||||| || |||||||| |||| ||    
T  459485 attgaggggtggttttgggtcaatttttgacctgaaatcacccctcttcatccttttctctctatttcattttaaataagcga-ttttcacatagatata 459387  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || |||||||||||||||||||||| | |||||| |||||||| |||| |||||||| | ||  ||  |||||||| |||| ||||||||||||||||||    
T  459386 ggtttttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcattt 459287  T
Q  645 gattcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||||||||||| ||| |||||| |||||||||    
T  459286 gattcatattgaaagatcgattatttaatcaaaga 459252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 683
Target Start/End: Original strand, 32913115 - 32913348
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggt 548  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||| ||| |||||||| || |||||| ||||||||||||||| |||| ||||||||||    
T  32913115 gaggggtggttttggatcaattcttgacctgaaatcacccctcttgatccttttctctatatttcaatttaaataagtgatttt-cacatagatctaggt 32913213  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    |||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| |   |||||||| |||| || || |||||||||| |||||    
T  32913214 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgttcatctgatt 32913313  T
Q  649 catattgaaaatcaattattcaatcaaagaattgg 683  Q
    ||||||||| ||| |||||||||||||||| ||||    
T  32913314 catattgaagatcgattattcaatcaaagatttgg 32913348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 452 - 684
Target Start/End: Original strand, 45128080 - 45128313
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttt 550  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||| ||||||||| |||    
T  45128080 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ctttcacatagatctaggtttt 45128178  T
Q  551 tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    |||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||| |||| | | || ||||||||||||||| ||||     
T  45128179 tttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcc 45128278  T
Q  651 tattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||| |||||||||||||||||||| |||||    
T  45128279 tattgaaatatcaattattcaatcaaagatttgga 45128313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 30420547 - 30420786
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  30420547 attgaggggtggttttggatcaatttttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 30420645  T
Q  546 gg--ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||  ||||||||| || ||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  |||||||| |||| ||  |||||||||||||    
T  30420646 ggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatt 30420745  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||| ||  ||| |||||||||||| ||||    
T  30420746 tgattcatattgaaagatagattgttcaatcaaagatttgg 30420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 6173502 - 6173740
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  6173502 attgaggggtggttttcggtctattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatcta 6173600  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| |||||||| ||| |  ||||||||||| ||||||| || ||||| || || ||  |||||||| || | ||  ||||||||||||||    
T  6173601 ggtttttttctttgtgatttcatcatcgaagtgtggtggtttgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcattt 6173700  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| || ||||||||||||| ||||    
T  6173701 gattcatattgaaagatcgatcattcaatcaaagatttgg 6173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 457 - 683
Target Start/End: Complemental strand, 7015910 - 7015684
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||||| || |||||||||||||| ||||||| |||| |||| ||||||||||| |    
T  7015910 gttttgggtcaattcttgacctgaaatcacccctcctaatctttttctctttatttcaatctaaataattgatttt-cacatagatttaggttttttcct 7015812  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
     |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| |||| ||  ||||||||||||||||||||||||||    
T  7015811 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattga 7015712  T
Q  657 aa-atcaattattcaatcaaagaattgg 683  Q
    || ||| |||||||||||||||| ||||    
T  7015711 aatatcgattattcaatcaaagatttgg 7015684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 459 - 676
Target Start/End: Original strand, 17319208 - 17319421
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcg 558  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||| |||| |||||||||||||| |   |||||||| |||||||||||||||||||     
T  17319208 tttgggtcaatttttgacctgaaatcatccctcctcat-tttttctatctatttcaatctaaataacta--ttttcacatagatctaggttttttcttca 17319304  T
Q  559 tgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||||||| | ||||||||||||||||||||  ||||||| ||| | || | ||||||| |||| |||||||||||||||||||| ||||||||||     
T  17319305 tgatttcgtcatctgagtgtggtggtgtgttgttcttcgtcttgtgcagcgt-tgttgattttccgtcttgttgcggtgttcatttgactcatattgaag 17319403  T
Q  659 atcaattattcaatcaaa 676  Q
    ||| ||||||||||||||    
T  17319404 atcgattattcaatcaaa 17319421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 457 - 678
Target Start/End: Original strand, 4192720 - 4192940
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||| | || |||||||||||||    
T  4192720 gttttggatcaatttttgacctgagatcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcacatatatttaggttttttctt 4192818  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
     |||||||| ||| |  ||||||||||| ||||||| |||||||| || |||||  ||||||||||||| || |||| |||||||| |||||||| ||||    
T  4192819 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcatctgattcattttga 4192918  T
Q  657 aaatcaattattcaatcaaaga 678  Q
    | ||| |||||||  |||||||    
T  4192919 agatcgattattccgtcaaaga 4192940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 9986558 - 9986315
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttca--tctttttctctctaattcaatctaaataagtgatttttcacacagatc 543  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||||||  | ||||| ||||||||||||||||||||||||||||| |||| |||||    
T  9986558 attgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcaattttttttatctctaattcaatctaaataagtgatttt-cacatagatc 9986460  T
Q  544 taggttt----tttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgtt 639  Q
    |||||||    |||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||| |||| ||  |||||||||    
T  9986459 taggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgtt 9986360  T
Q  640 catttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||    
T  9986359 catttgattcatattgaaagatcgattattcaattaaagatttgg 9986315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 21570619 - 21570381
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  21570619 attgagtggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcacatagatcta 21570521  T
Q  546 g--gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |   |||||| || |||||||| ||| |  ||||||||||| ||||||| |||||||| || |  ||  |||  |||||||| || | ||||||||||||    
T  21570520 gattttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatt 21570421  T
Q  644 tgattcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| |||||||||||||||| ||||    
T  21570420 tgattcatattgaagatcgattattcaatcaaagatttgg 21570381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 27249362 - 27249124
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  27249362 attgaagggtggttttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 27249264  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    || ||||||||| || |||||   | |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  ||||||||||||||    
T  27249263 ggtttttttctttgtaatttcaagatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcattt 27249164  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    |||||||||||||| ||| ||| |||||||||||| ||||    
T  27249163 gattcatattgaaagatcgattgttcaatcaaagatttgg 27249124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 446 - 683
Target Start/End: Complemental strand, 3270439 - 3270202
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||| ||||||||||||||| | | ||||||||||||| | || |||||||||||||||||| |||||||| |||||||    
T  3270439 attgaggggtggttttgggtcaattcttgacctgaaatcactcattttcatctttttctttttatttcaatctaaataagtga-ttttcacatagatcta 3270341  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||| || |||||||| ||| |  ||||||||||  ||||||| ||||| || || || ||  |||||||| |||| ||  |||||||||||||||    
T  3270340 ggttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttg 3270241  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  3270240 attcatattgaaagatcgattattcaatcaaagatttgg 3270202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 36233875 - 36234116
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||    
T  36233875 attgaggggtggttttgggtcaattcatgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatcta 36233973  T
Q  546 g----gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
    |     ||||||||| || ||||| ||| |  ||||||||| | | ||||| |||||||| ||||| ||  ||||||||||||| ||  |||||||||||    
T  36233974 gattttttttttctttgtaatttcatcatctaagtgtggtgattttttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 36234073  T
Q  642 tttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||||| ||| ||| |||||||||||| ||||    
T  36234074 tttgattcatattgaaagatcgattgttcaatcaaagatttgg 36234116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 446 - 683
Target Start/End: Original strand, 27477025 - 27477256
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||| |||||||    
T  27477025 attgagggatggttttgggtcaattattgacatgaaatcacccctcttcatctttttctctatatttcaatctaaataagt-aattttcacatagatcta 27477123  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtatt-gttgcggtgttcattt 644  Q
    | ||||||||| |||||||| |||      | ||||||| |||||||||| ||||| ||||| |   |||||||| |||| ||  |||||||||||||||    
T  27477124 gattttttctttgtgatttcatca------tctggtggtttgttgtttgtagtcttgtgcggcgctgtttgattttccgtcttctttgcggtgttcattt 27477217  T
Q  645 gattcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  27477218 gattcatattgaagatcgattattcaatcaaagatttgg 27477256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 8971839 - 8971600
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctc--taattcaatctaaataagtgatttttcacacagatc 543  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||  || || ||||||||||||||| |||||||| |||||    
T  8971839 attgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcatctttttctctctttattttaatctaaataagtga-ttttcacatagatc 8971741  T
Q  544 taggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    ||||||||||||| |||||||| ||| |  ||| ||||||| ||||||| |||||||| ||| | ||  ||||||||||| | ||  |||| ||||||||    
T  8971740 taggttttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccatcttcgtgcgatgttcatt 8971641  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    ||||||||| ||||| |||||||| ||||| ||||| |||||    
T  8971640 tgattcataatgaaagatcaatta-tcaattaaagatttgga 8971600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 447 - 683
Target Start/End: Original strand, 34598858 - 34599095
Alignment:
Q  447 ttgaggggtagttttgggtcaatttttgacctgaaatcacccc-tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||| ||||||| |||||| ||||||| |||||| | | |||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  34598858 ttgaggggtggttttggatcaattcttgacctcaaatcaactcatcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatcta 34598956  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | |||||| || |||||||| ||| |  ||||||||||| |||||||  ||||||| ||||| ||  |||||||| || | ||  |||||||||||||||    
T  34598957 gtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttg 34599056  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  34599057 attcatattgaaagatcgattattcaatcaaagatttgg 34599095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 446 - 678
Target Start/End: Original strand, 3725051 - 3725283
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||| ||||||||||| |||||||| ||||||     
T  3725051 attgaggggtggttttgggtcaatttttgacctaaaatcattcctcttcatctttttctctctatttcaatataaataagtga-ttttcacatagatctt 3725149  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    | ||||||||| |||||||| ||  |  ||||||||||| ||||||| || ||||| | ||| ||  ||||||||| ||| ||  || ||||||| ||||    
T  3725150 gattttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttg 3725249  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||||||||||||| ||| ||||||||||||||||    
T  3725250 attcatattgaaagatcgattattcaatcaaaga 3725283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 446 - 619
Target Start/End: Complemental strand, 40626238 - 40626066
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    ||||||||||  ||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||| |||||||    
T  40626238 attgaggggtgattttgggtctattcttgacctgaaatcacccctcttcgtctttttctctctatttcaatctaaataaggga-ttttcacatagatcta 40626140  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatt 619  Q
     |||||||||| |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||||||  |||||||    
T  40626139 cgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 477 - 684
Target Start/End: Original strand, 41430929 - 41431137
Alignment:
Q  477 ctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggt-tttttcttcgtgatttcgtcacccgag 575  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| | |||| ||| |||||||||| |||||||| |||||||| ||| |  ||    
T  41430929 ctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtcactttt-acatagatctaggtgtttttctttgtgatttcatcatctaag 41431027  T
Q  576 tgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatca 674  Q
    ||||||||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||||||||||||||| ||||  ||||||| ||| ||||||||||||    
T  41431028 tgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatca 41431127  T
Q  675 aagaattgga 684  Q
    |||| |||||    
T  41431128 aagatttgga 41431137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 20047292 - 20047054
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||| ||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||| ||| |||| ||    
T  20047292 attggggggtagttttggatcaattcttgacctgaaatcaccc-tattcatctttttctctctttttcaatctaaataagtgactttt-acatagattta 20047195  T
Q  546 ggtttttt-cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcattt 644  Q
    |||||||| | | |||||||| ||| |  ||||||||||| ||||||| |||||||| ||||| ||  |||||||||  || || || ||||||||||||    
T  20047194 ggtttttttcattgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattt 20047095  T
Q  645 gattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||| |||||||| ||| |||||||||||||||| |||||    
T  20047094 tattcctattgaaagatcgattattcaatcaaagatttgga 20047054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 490 - 678
Target Start/End: Original strand, 8805781 - 8805969
Alignment:
Q  490 tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgtt 589  Q
    ||||||| ||||||||| || |||||| ||||||||||||||| ||||  ||||||||||||||||| |||||||| ||| | |||||||||||| ||||    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgatttt-cacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgtt 8805879  T
Q  590 gtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaaga 678  Q
    ||| |||||||| ||||  ||  ||||||||||||| ||  || ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  8805880 gttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatcgattattcaatcaaaga 8805969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 469 - 676
Target Start/End: Complemental strand, 26025598 - 26025390
Alignment:
Q  469 tttttgacctgaaatcacccc-tcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgt 567  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||| |||||||| |    
T  26025598 tttttgatctgaaatcaccccatcttcatctttttctctctatttcaatctaaataagtg-gttttcacatagatctaggttttttctttgtgatttcat 26025500  T
Q  568 cacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaatta 666  Q
    ||    |||||||| || ||||| | |||||||| ||||| ||  ||||||||  ||| || |||||||||||||||||||||| |||||| |||  |||    
T  26025499 catgtaagtgtggtagtttgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatcggtta 26025400  T
Q  667 ttcaatcaaa 676  Q
    ||||||||||    
T  26025399 ttcaatcaaa 26025390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 452 - 683
Target Start/End: Complemental strand, 40660134 - 40659905
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||| |||||| ||||||| ||||||||||||||| | ||||||||||||||||| |  |||||||||||||||||||||| |||| |||||||| ||||    
T  40660134 gggtggttttgagtcaattcttgacctgaaatcacacatcttcatctttttctctat--ttcaatctaaataagtgatttt-cacatagatctagatttt 40660038  T
Q  552 ttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcat 651  Q
    ||||| |||||||| ||| |  ||||||||| | ||||||| |||||||| ||||| ||  ||||||||||||| ||  | || || ||||||||||| |    
T  40660037 ttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtccgatgctcatttgattctt 40659938  T
Q  652 attgaaa-atcaattattcaatcaaagaattgg 683  Q
    | ||||| ||| |||||||||||||||| ||||    
T  40659937 actgaaagatcgattattcaatcaaagatttgg 40659905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 684
Target Start/End: Original strand, 8308054 - 8308279
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttct--ctctaattcaatctaaataagtgatttttcacacagatctaggttttttc 554  Q
    ||||||| |||| ||||||| |||||| | || ||||||||||||| |  ||||||||||||||||||  |||||||| |||| ||||||||||||||||    
T  8308054 gttttggatcaacttttgacttgaaataatccttcttcatctttttttttctctaattcaatctaaat--gtgatttt-cacatagatctaggttttttc 8308150  T
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||||||||||||| | || |||||  | |||||||| |||||||| ||| | ||  |||||||| | |||||||||| || |||||||||||||||||    
T  8308151 ttcgtgatttcgtcatctgactgtgg-cgcgtgttgttcgtcgtcttgtgcagcgttgtttgattt-ctgtattgttgcagttttcatttgattcatatt 8308248  T
Q  655 gaaa-atcaattattcaatcaaagaattgga 684  Q
    |||| ||| ||||||||||||||||||||||    
T  8308249 gaaagatcgattattcaatcaaagaattgga 8308279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 459 - 673
Target Start/End: Complemental strand, 39642057 - 39641841
Alignment:
Q  459 tttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--ttttttctt 556  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| ||||||| ||| |||||||| |||||||||  |||||||||    
T  39642057 tttggatcaatttttgacctgaaatcacttatcttcatctttttctctctatttcaatttaaataaatga-ttttcacatagatctaggttttttttctt 39641959  T
Q  557 cgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattga 656  Q
    ||||||||| ||| | || ||| |||||   ||||| ||| |||| ||||   |  ||||||||||||| |||||||||| ||||||| |||||||||||    
T  39641958 cgtgatttcatcatctgaatgttgtggtagtttgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattga 39641859  T
Q  657 aa-atcaattattcaatc 673  Q
    || |||||||||||||||    
T  39641858 aagatcaattattcaatc 39641841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 22421659 - 22421835
Alignment:
Q  499 ttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgt 598  Q
    ||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||| |||||||| ||| |  ||||||||||| ||||||| ||| |    
T  22421659 ttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcat 22421757  T
Q  599 cttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaa 675  Q
    |||  |||||||  ||||||||||| | || |||||||||||||||||||| |||||||| ||| |||||||||||||    
T  22421758 cttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaaagatcgattattcaatcaa 22421835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 450 - 684
Target Start/End: Original strand, 25086908 - 25087146
Alignment:
Q  450 aggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtga---tttttcacacagatctag 546  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||| || |||||| ||||||||    |||||||| ||||||||    
T  25086908 aggggtggttttgggtcaattattgacctgaaatcacccctcttcatctttttccatctatttgaatctatataagtgagtgattttcacatagatctag 25087007  T
Q  547 gttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttga 646  Q
    ||||||| ||  ||||||| ||| |  ||||||||||| ||||||| |||||||| ||||  ||  |||| |||||| | || |||| ||||||| || |    
T  25087008 gttttttatttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgctttcccttcttcttgcagtgttcaattta 25087107  T
Q  647 ttcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||||||| ||| ||| ||||||||||||| || |||||    
T  25087108 ttcatattaaaagatcgattattcaatcaatgatttgga 25087146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 458 - 683
Target Start/End: Original strand, 27949306 - 27949534
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttc 557  Q
    ||||||| ||||| ||||||||||||||| | | |||||| ||||| ||||  |||||||||||||||||||||| |||| ||||||||||||||| |||    
T  27949306 ttttgggacaattcttgacctgaaatcacac-tattcatccttttcgctctgtttcaatctaaataagtgatttt-cacatagatctaggtttttttttc 27949403  T
Q  558 ----gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatat 653  Q
        | |||||| ||| |  ||||||||||| | ||||| |||||||| | ||| ||  ||||||||||||| || ||||| ||||||||||||||||||    
T  27949404 tattgcgatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatat 27949503  T
Q  654 tgaaa-atcaattattcaatcaaagaattgg 683  Q
     |||| |||||||||||||||||||| ||||    
T  27949504 cgaaagatcaattattcaatcaaagatttgg 27949534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 650
Target Start/End: Original strand, 4228013 - 4228207
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--ttttttc 554  Q
    |||||||||||||| ||||||||||||||| | ||||||| ||||| ||| || |||||| ||||||||||| ||| |||| ||||||| |  |||||||    
T  4228013 gttttgggtcaattcttgacctgaaatcacacatcttcatatttttatctttatttcaatataaataagtga-tttacacatagatctatgttttttttc 4228111  T
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattca 650  Q
    || |||||||| ||| |  |||||| |||| ||||||| |||||||| ||||| ||  |||||||| |||| ||  ||||||||||||||||||||    
T  4228112 tttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattca 4228207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 448 - 676
Target Start/End: Complemental strand, 37614334 - 37614105
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcaccc-ctcttcatcttttt--ctctctaattcaatctaaataagtgatttttcacacagatct 544  Q
    |||||||||||||||| | |||||||||||||||||||| | | ||||||||||||  ||||||| ||||  |||||||||||||||| || | ||||||    
T  37614334 tgaggggtagttttggattaatttttgacctgaaatcactctcgcttcatctttttttctctctatttca--ctaaataagtgatttt-catatagatct 37614238  T
Q  545 aggttttttcttcgtgatttcgtcaccc-gagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatt 643  Q
    |  ||| | ||||||| |||||| | |  |||||||||| |||||||||  ||||||| ||||  ||  |||||||| |||| |||||||||||||||||    
T  37614237 aaatttgt-cttcgtggtttcgtaatcttgagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatt 37614139  T
Q  644 tgattcatattgaaa-atcaattattcaatcaaa 676  Q
    ||||||||||||||| ||  ||||||||||||||    
T  37614138 tgattcatattgaaagattgattattcaatcaaa 37614105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 446 - 678
Target Start/End: Complemental strand, 9374760 - 9374534
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||| | |||||||||||||||||||| |||||||| |  ||||||||||||||| |||| ||      ||||||| |||||| |||| | |||||    
T  9374760 attgagggatggttttgggtcaatttttgacatgaaatcaacattcttcatctttttctttctattt------aaataagggatttt-cacataaatcta 9374668  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
     | ||||||||||||||||||||| |  | ||||||||||||||||| ||| |||| ||||   |  |||| ||| |||| |||||| ||||||||||||    
T  9374667 agatttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttcatttg 9374568  T
Q  646 attcatattgaaa-atcaattattcaatcaaaga 678  Q
    |||||| |||||| | | ||||||||||||||||    
T  9374567 attcattttgaaagaacgattattcaatcaaaga 9374534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 451 - 598
Target Start/End: Complemental strand, 32680788 - 32680640
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg--t 548  Q
    ||||| ||||| |||| ||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||||  |    
T  32680788 ggggtggttttcggtcgattcttgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggttt 32680690  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgt 598  Q
    |||||||| |||||||| ||| |  ||||||||||| ||||||| |||||    
T  32680689 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 465 - 654
Target Start/End: Complemental strand, 32197986 - 32197798
Alignment:
Q  465 tcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgattt 564  Q
    |||||||||||||  ||||||| | ||||||||||||||||| || |||||| ||||||| ||||||||  || | || ||||||||||||| |||||||    
T  32197986 tcaatttttgaccaaaaatcactcatcttcatctttttctctttatttcaatataaataaatgattttt-gcataaatttaggttttttctttgtgattt 32197888  T
Q  565 cgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||| |  |||||||| ||||||||    |||||||  ||||  |  |||||||||| || ||||||||||||||||||||||||||||    
T  32197887 cgtcatctaagtgtggtagtgtgttgcccatcgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatatt 32197798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 601
Target Start/End: Complemental strand, 41712976 - 41712821
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||| |||| ||||| ||||||||||| | |||||| ||||||||||| || ||||||||||||||| |||||||| |||| ||    
T  41712976 attgaggggtggttttgggttaattcttgacgtgaaatcacccattttcatcattttctctctattttaatctaaataagtga-ttttcacatagattta 41712878  T
Q  546 gg-ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtctt 601  Q
    || ||||||||  |||||||| ||| |  ||||||||||| ||||||| ||||||||    
T  41712877 ggtttttttctctgtgatttcctcatctaagtgtggtggtttgttgttcgtcgtctt 41712821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 683
Target Start/End: Complemental strand, 3269251 - 3269084
Alignment:
Q  518 taaataagtgatttttcacacagatctaggttttttcttc--gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtctttt 615  Q
    ||||||||||||||| |||| ||||||||||||||| ||   |||||||| ||| |  ||||||||||  ||||||| ||||| || || || ||  |||    
T  3269251 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269153  T
Q  616 gatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| |||| ||  |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  3269152 gattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgg 3269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 683
Target Start/End: Complemental strand, 3269810 - 3269643
Alignment:
Q  518 taaataagtgatttttcacacagatctaggttttttcttc--gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtctttt 615  Q
    ||||||||||||||| |||| ||||||||||||||| ||   |||||||| ||| |  ||||||||||  ||||||| ||||| || || || ||  |||    
T  3269810 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269712  T
Q  616 gatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||| |||| ||  |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  3269711 gattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgg 3269643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 505 - 641
Target Start/End: Original strand, 10248077 - 10248211
Alignment:
Q  505 ctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatg 604  Q
    ||||| |||||||||| |||||||||| | | | ||||||||||||| ||||||||| ||||||| | |||||||| ||||||||||||| ||||||||     
T  10248077 ctctatttcaatctaattaagtgatttct-atatagatctaggtttt-tcttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtcttata 10248174  T
Q  605 cggtgtcttttgatttcccgtattgttgcggtgttca 641  Q
     || || |||| ||||||||| || ||||||||||||    
T  10248175 tggcgtttttttatttcccgttttattgcggtgttca 10248211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 684
Target Start/End: Complemental strand, 84224 - 84153
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaaatcaattattcaatcaaagaattgga 684  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  84224 tttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaatcgattattcaatcaaagatttgga 84153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 671
Target Start/End: Complemental strand, 30923678 - 30923458
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctag---g 547  Q
    ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||   ||||| |||||||||||||| |||||||| ||| ||||| ||        
T  30923678 ggggtcgttttaggtcaatttttgacccgaaatcacccatcttcatctttt--actctatttcaatctaaataaatgattttt-acatagatcaagataa 30923582  T
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||| | ||| |||||||||||  | | |||||| | |||||||| ||||||||| ||||| || ||||||||||  || |||||||  | |||||||| |    
T  30923581 tttctcctttgtgatttcgtcgtctgggtgtggcgctgtgttgtatgtcgtcttgtgcggcgt-ttttgatttcttgtcttgttgcaatattcatttggt 30923483  T
Q  648 tcatattga-aaatcaattattcaa 671  Q
    || |||||| | |||||||||||||    
T  30923482 tcttattgacagatcaattattcaa 30923458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 553
Target Start/End: Original strand, 42949605 - 42949691
Alignment:
Q  467 aatttttgacctgaaatcacccctcttcatc-tttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt 553  Q
    |||| ||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||||| |||||||||||||||    
T  42949605 aattcttgacttgaaatcacccctcttcatcttttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 42949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 457 - 672
Target Start/End: Original strand, 24587595 - 24587804
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg-ttttttct 555  Q
    |||||||||||||||||||||  |||||||| |||||||||||||| ||| || |||||| ||||||| ||||||         ||||||| ||||||||    
T  24587595 gttttgggtcaatttttgacccaaaatcacctctcttcatctttttatctatatttcaatttaaataaatgattt-------gcatctaggtttttttct 24587687  T
Q  556 tcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattg 655  Q
    || |||||||||   | ||||| ||   |||| | || |||||||| ||  | ||   |||||||| ||||||||||||||||||||||  |||||||||    
T  24587688 tcatgatttcgttgtctgagtgcggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagttcatattg 24587787  T
Q  656 aaaatcaattattcaat 672  Q
    ||||||| |||||||||    
T  24587788 aaaatcagttattcaat 24587804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 574 - 678
Target Start/End: Complemental strand, 31580672 - 31580567
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| ||||||| |||||||| ||||| ||  ||| ||||||||||||  |||||||||||||||||| ||||||||| ||| |||||| |||    
T  31580672 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaagatcgattattaaat 31580573  T
Q  673 caaaga 678  Q
    ||||||    
T  31580572 caaaga 31580567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 565
Target Start/End: Complemental strand, 31581888 - 31581812
Alignment:
Q  488 cctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttc 565  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| |||||||||  |||||||    
T  31581888 cctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctagtttttttctttttgatttc 31581812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 516
Target Start/End: Complemental strand, 33229199 - 33229129
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaat 516  Q
    ||||| |||| |||||||||||||| |||| || |||||||| |||||||||||||| |||||| ||||||    
T  33229199 attgaagggtggttttgggtcaattattgagctaaaatcacctctcttcatctttttttctctatttcaat 33229129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 33140309 - 33140408
Alignment:
Q  457 gttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttctt 556  Q
    ||||||| |||||||||||||| |||||  | ||  | |||||| | |||||| ||||||||||| ||||||||| | ||||||||||| ||||||||||    
T  33140309 gttttggatcaatttttgaccttaaatcgtcgcttgttatctttatttctctatttcaatctaaacaagtgatttat-acacagatctaagttttttctt 33140407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 451 - 533
Target Start/End: Original strand, 18694922 - 18695005
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttt-tctctctaattcaatctaaataagtgattttt 533  Q
    ||||| || ||||||||| |||| |||  ||||||  | |||||||||||| |||||||| |||||||||||||||||||||||    
T  18694922 ggggtggtattgggtcaactttttacccaaaatcattcatcttcatcttttttctctctatttcaatctaaataagtgattttt 18695005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 658
Target Start/End: Complemental strand, 29574763 - 29574660
Alignment:
Q  555 ttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatatt 654  Q
    ||||||||||||||  ||||||| || | ||||||||| |||||||| |||||  |  ||||||||| | | ||||||| |||||  |||||||||||||    
T  29574763 ttcgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatatt 29574664  T
Q  655 gaaa 658  Q
    ||||    
T  29574663 gaaa 29574660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 3308790 - 3308875
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt--ctctctaattcaatctaaataagtgatttt 532  Q
    |||||||  |||| ||||||||||||||||  |||||||||| | |||||||||  | || || ||||||||||||||||||||||    
T  3308790 gaggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgatttt 3308875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 570
Target Start/End: Original strand, 9418298 - 9418413
Alignment:
Q  452 gggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggtttt 551  Q
    |||||||||||| ||||| |||||| | ||||||| | |||| ||  |||| |||||| |||||| | ||||||||| |||||||| |||||||| ||||    
T  9418298 gggtagttttggatcaatgtttgacataaaatcactcatcttaattgttttatctctatttcaat-ttaataagtga-ttttcacatagatctagttttt 9418395  T
Q  552 ttcttcgtgatttcgtcac 570  Q
    || || |||||||||||||    
T  9418396 ttgtt-gtgatttcgtcac 9418413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 675
Target Start/End: Original strand, 36323799 - 36323955
Alignment:
Q  516 tctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtctttt 615  Q
    ||||||||||||||||| |||| |||| ||||||||||||  |||||||||||    ||||| ||   |||||||||||| ||||| |||||   | |||    
T  36323799 tctaaataagtgatttt-cacatagatttaggttttttctctgtgatttcgtcgtttgagtgcggctttgtgttgtttgttgtcttgtgcgg---cgttt 36323894  T
Q  616 gatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaa 675  Q
    |||||| ||| ||||||   |||||||||| ||| |||||||| |||  ||||||||||||    
T  36323895 gatttctcgtcttgttgaaatgttcatttggttcctattgaaagatctgttattcaatcaa 36323955  T

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Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 10237452 - 10237376
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatcttttt--ctctctaattcaatctaaataagtgatttt 532  Q
    |||| ||||||||||||||||  |||||||||||| |||||||||  | || |  ||||||||||||||||||||||    
T  10237452 ttttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttctttcaatctaaataagtgatttt 10237376  T

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Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 532
Target Start/End: Complemental strand, 32448869 - 32448785
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctc-tctaattcaatctaaataagtgatttt 532  Q
    ||||||| ||||| ||||| | |||||||| ||||||||||||| |||||||||| | | |  ||| ||||||||||||||||||    
T  32448869 gaggggtggttttaggtcattatttgacctaaaatcacccctctgcatctttttcccctttctttcgatctaaataagtgatttt 32448785  T

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Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 504
Target Start/End: Complemental strand, 12677544 - 12677489
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttct 504  Q
    ||||||||||||  ||||| ||||||||||  |||||||||||| |||||||||||    
T  12677544 gaggggtagtttaaggtcattttttgacctagaatcacccctctacatctttttct 12677489  T

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Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 658
Target Start/End: Original strand, 4264443 - 4264540
Alignment:
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||||||  | ||||| | || || |||||| |||||||| ||||||||   |||||||| ||| || |||||||||||||||| ||| |||||||    
T  4264443 gtgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtgcggtgt---ttgatttcgcgtcttattgcggtgttcatttggttcttattgaa 4264539  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 7678127 - 7678073
Alignment:
Q  448 tgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    |||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  7678127 tgaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 7678073  T

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Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 574 - 640
Target Start/End: Complemental strand, 12648036 - 12647970
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttc 640  Q
    |||| |||| ||||||||| |||||||| ||||| ||  ||||||||| ||| ||||||||||||||    
T  12648036 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttc 12647970  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 14955389 - 14955458
Alignment:
Q  464 gtcaatttttgacctgaaatcacccctcttcatcttttt--ctctctaattcaatctaaataagtgattt 531  Q
    |||||||||||||||  ||||| |||||| |||||||||  |||| |  |||||||||||||||||||||    
T  14955389 gtcaatttttgacctagaatcatccctctgcatcttttttcctctttctttcaatctaaataagtgattt 14955458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 675
Target Start/End: Complemental strand, 39285496 - 39285275
Alignment:
Q  458 ttttgggtcaatttttgacctgaaatcacccctcttcatcttttt-ctctctaattcaatctaaataagtgatttttcacacagatctaggtttttt--- 553  Q
    |||||||||||| |||||  ||||||||||  |||| |||||||| ||||| | |||| | ||||||||||  |||||||| | |||||| ||||||       
T  39285496 ttttgggtcaatatttgagttgaaatcacctatctttatctttttcctctccatttcattttaaataagtg-gttttcacataaatctagtttttttctt 39285398  T
Q  554 -cttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcata 652  Q
     |||||| ||||||||  | |||||||| | ||||| |||| |||| || ||| |  |  ||  |||||  ||||||||| |||||||||||||||| ||    
T  39285397 ccttcgtaatttcgtcgtctgagtgtggcgttgtgtcgtttatcgttttgtgcagcattgttaaatttcttgtattgttg-ggtgttcatttgattccta 39285299  T
Q  653 ttgaaa-atcaattattcaatcaa 675  Q
    |||||| ||  |||||||||||||    
T  39285298 ttgaaatatagattattcaatcaa 39285275  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 4778604 - 4778657
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  4778604 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 4778657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 7646323 - 7646376
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt 502  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| |||||||||    
T  7646323 gaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttt 7646376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 531
Target Start/End: Complemental strand, 12648172 - 12648088
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatcttttt-ctctctaatt-caatctaaataagtgattt 531  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||  ||||||||| |||| |  || |||||||||||||||||||    
T  12648172 gaggggtggttttaggtcattttttgacctagaatcacccctccacatcttttttctcttttctttcaatctaaataagtgattt 12648088  T

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Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 533
Target Start/End: Complemental strand, 13719327 - 13719283
Alignment:
Q  489 ctcttcatctttttctctctaattcaatctaaataagtgattttt 533  Q
    |||||| |||||||||||| | |||||| ||||||||||||||||    
T  13719327 ctcttcgtctttttctctccatttcaatttaaataagtgattttt 13719283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 613 - 684
Target Start/End: Complemental strand, 32679154 - 32679082
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||| ||||| || || ||||| ||||||||| |||| |||||||| ||| |||||||||||||||| |||||    
T  32679154 tttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattcaatcaaagatttgga 32679082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 37994316 - 37994348
Alignment:
Q  627 ttgttgcggtgttcatttgattcatattgaaaa 659  Q
    ||||||| |||||||||||||||||||||||||    
T  37994316 ttgttgcagtgttcatttgattcatattgaaaa 37994348  T

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Target: scaffold0495 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 451 - 684
Target Start/End: Original strand, 5269 - 5503
Alignment:
Q  451 ggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta-ggtt 549  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||| | ||||| | ||    
T  5269 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaataagtgactttt-acatatatctatgttt 5367  T
Q  550 ttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattc 649  Q
    ||||||| |||||||| |||    |||||| |||| ||||||| |||||||| ||||| ||  |||| |||||||| || ||| ||||||||||| |||     
T  5368 ttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttattt 5467  T
Q  650 atattgaaa-atcaattattcaatcaaagaattgga 684  Q
     |||||||| ||  |||||||||||||||| |||||    
T  5468 ctattgaaagattgattattcaatcaaagatttgga 5503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 494 - 683
Target Start/End: Complemental strand, 201534 - 201346
Alignment:
Q  494 catctttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgttt 593  Q
    ||||||||||||| || |||||||||||||||||||||| |||| |||||||| ||||||||| |||||||| ||| |  |||||| |||| |||||||     
T  201534 catctttttctctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 201436  T
Q  594 gtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaaatcaattattcaatcaaagaattgg 683  Q
    || ||||| ||||| |   ||||||||| ||| || ||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  201435 gtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattgaagatcgattattcaatcaaagatttgg 201346  T

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Target: scaffold0311 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 446 - 593
Target Start/End: Original strand, 8586 - 8732
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| ||||||||| |||| || || ||||||||||||| ||||||||||| |||||| |||||||||||||||||| |||||||| |||||||    
T  8586 attgaggggtggttttgggttaattcttaacttgaaatcaccccttttcatctttttatctctatttcaatctaaataagtga-ttttcacatagatcta 8684  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgttt 593  Q
    ||||||||||| |||||||| ||| |  ||||||||||| ||||||||    
T  8685 ggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttt 8732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 683
Target Start/End: Original strand, 8745 - 8795
Alignment:
Q  634 ggtgttcatttgattcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgg 8795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 362005 - 361771
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatcta 545  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||  ||||| |||||||||||||||| | |||||||| |||  ||    
T  362005 attgaggggtggttttgagtcaattcttgacctgaaatcacccctctccatcttttt--ctctatttcaatctaaataagt-aattttcacatagagtta 361909  T
Q  546 ggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttg 645  Q
    |||||||  || |||||||| |||    ||| ||||||| ||||||| |||||||| ||||| ||  |||||||||| || ||| ||| |||||||||||    
T  361908 ggttttt--tttgtgatttcatcatttaagtatggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcctgtcttggtgcagtgttcatttg 361811  T
Q  646 attcatattgaaa-atcaattattcaatcaaagaattgga 684  Q
    |||| ||  |||| || ||||||||||||||||| |||||    
T  361810 attcttacagaaagattaattattcaatcaaagatttgga 361771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 463 - 683
Target Start/End: Complemental strand, 16516 - 16293
Alignment:
Q  463 ggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctagg---ttttttcttcgt 559  Q
    |||||||| ||||||| ||||||  | ||||||||| |||||||||| |||||||||||||||||| |||||||| |||| ||||   ||||||||| ||    
T  16516 ggtcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtga-ttttcacatagatttaggtttttttttctttgt 16418  T
Q  560 gatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa- 658  Q
    |||||| ||| |  ||||||||||| |||||||||||||||| ||||| ||  |||||| ||  || ||   |||||||| |||||||||||||| |||     
T  16417 gatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaat 16318  T
Q  659 atcaattattcaatcaaagaattgg 683  Q
    ||| |||||||||||||||| ||||    
T  16317 atcgattattcaatcaaagatttgg 16293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 498 - 677
Target Start/End: Original strand, 453851 - 454030
Alignment:
Q  498 tttttctctctaattcaatctaaataagtgatttttcacacagatctaggttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcg 597  Q
    ||||||||| || || ||| ||||||||||||||| |||| | || || ||||||||||||||||||||| |   || |||| |||||||||||| ||||    
T  453851 tttttctctttattttaatttaaataagtgatttt-cacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcg 453949  T
Q  598 tcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaatcaaag 677  Q
    ||||  |||| ||  |||||||| | || |||||||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  453950 tcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattcaatcaaag 454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 651
Target Start/End: Complemental strand, 20600 - 20402
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttttcacacagatctaggt 548  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  ||||||||||| |||| ||| ||||||||||||||| |||||| | |||| | ||     
T  20600 gaggggtggttttgg-tcaatttttgacctgaaatcacccattgtcatctttttcactct-attaaatctaaataagtga-ttttcatatagat-ttggc 20505  T
Q  549 tttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgatt 648  Q
    ||||| ||   |||||| ||| |  ||||||||||| ||||||| |||||||| ||||  ||  |||||||| |||| || |||||||||||||||||||    
T  20504 ttttttttttagatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgttttcttgcggtgttcatttgatt 20405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 574 - 676
Target Start/End: Original strand, 6299 - 6402
Alignment:
Q  574 agtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa-atcaattattcaat 672  Q
    ||||||||||| ||||||| |||||||| | |||  |  ||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  6299 agtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaat 6398  T
Q  673 caaa 676  Q
    ||||    
T  6399 caaa 6402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 6221 - 6290
Alignment:
Q  463 ggtcaatttttgacctgaaatcacccctcttcatctttttctctctaattcaatctaaataagtgatttt 532  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  6221 ggtcaattcttgacctaaaatcacccctcttcatctttttttctctattccaatctaaataagtgatttt 6290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 584 - 658
Target Start/End: Original strand, 6014 - 6088
Alignment:
Q  584 tgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||||| |||||||| ||||| ||  ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6014 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

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Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 683
Target Start/End: Complemental strand, 83544 - 83411
Alignment:
Q  548 ttttttcttcgtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgat 647  Q
    ||||||||| |||||||| ||| |  ||||||||||| |||||||||||   || ||||| ||  ||||||||| ||| ||  |||||| ||||||||||    
T  83544 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc---ttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgat 83448  T
Q  648 tcatattgaaa-atcaattattcaatcaaagaattgg 683  Q
    ||||||||||| ||| ||||||||||| |||| ||||    
T  83447 tcatattgaaagatcgattattcaatcgaagatttgg 83411  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 531
Target Start/End: Complemental strand, 58327 - 58243
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatc--tttttctctctaattcaatctaaataagtgattt 531  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||| ||||  ||||||  | |  |||||||||||||||||||||    
T  58327 gaggggtggttttaggtcattttttgacctaaaatcacccctctgcatccttttttccttttctttcaatctaaataagtgattt 58243  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 15333 - 15387
Alignment:
Q  449 gaggggtagttttgggtcaatttttgacctgaaatcacccctcttcatctttttc 503  Q
    ||||||| ||||| ||||| ||||||||||  |||||||||||| ||||||||||    
T  15333 gaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttc 15387  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 108 - 157
Alignment:
Q  446 attgaggggtagttttgggtcaatttttgacctgaaatcacccctcttca 495  Q
    |||||||||| |||||||||||||| || |||||||||||| | ||||||    
T  108 attgaggggtggttttgggtcaattcttaacctgaaatcactcatcttca 157  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 613 - 658
Target Start/End: Complemental strand, 34824 - 34779
Alignment:
Q  613 tttgatttcccgtattgttgcggtgttcatttgattcatattgaaa 658  Q
    ||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  34824 tttgatttctcgttttgttgcagggttcatttgattcatattgaaa 34779  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 558 - 658
Target Start/End: Complemental strand, 92627 - 92527
Alignment:
Q  558 gtgatttcgtcacccgagtgtggtggtgtgttgtttgtcgtcttatgcggtgtcttttgatttcccgtattgttgcggtgttcatttgattcatattgaa 657  Q
    |||||||||||  | ||||||| || ||||||| |   |||||| |||| |||  ||||||||| ||| |||||| ||||||| |||| |||||||||||    
T  92627 gtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaa 92528  T
Q  658 a 658  Q
    |    
T  92527 a 92527  T

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