View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6641_low_80 (Length: 302)

Name: NF6641_low_80
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6641_low_80
NF6641_low_80
[»] chr8 (39 HSPs)
chr8 (1-299)||(2267182-2267480)
chr8 (1-170)||(30423069-30423235)
chr8 (1-169)||(9021266-9021434)
chr8 (1-165)||(21033729-21033893)
chr8 (1-130)||(33032549-33032677)
chr8 (174-299)||(38658300-38658425)
chr8 (1-165)||(23179720-23179884)
chr8 (1-168)||(29554944-29555111)
chr8 (1-165)||(590653-590817)
chr8 (7-130)||(26268395-26268517)
chr8 (1-150)||(28895375-28895525)
chr8 (171-294)||(5062984-5063101)
chr8 (1-128)||(17799583-17799709)
chr8 (1-168)||(3276200-3276367)
chr8 (1-150)||(28327783-28327931)
chr8 (1-170)||(15949389-15949557)
chr8 (1-150)||(16752681-16752830)
chr8 (3-150)||(4812648-4812794)
chr8 (1-150)||(16757426-16757575)
chr8 (1-165)||(25684504-25684666)
chr8 (1-150)||(28332506-28332654)
chr8 (28-170)||(15944728-15944869)
chr8 (171-299)||(7932871-7932999)
chr8 (170-288)||(15013641-15013759)
chr8 (1-169)||(17847528-17847701)
chr8 (171-294)||(45067396-45067519)
chr8 (171-288)||(11357159-11357277)
chr8 (171-288)||(36424613-36424731)
chr8 (163-288)||(12770027-12770150)
chr8 (170-288)||(6463510-6463629)
chr8 (170-288)||(36004418-36004537)
chr8 (171-288)||(7312516-7312634)
chr8 (171-288)||(8012255-8012373)
chr8 (1-123)||(28228416-28228537)
chr8 (171-288)||(36077134-36077252)
chr8 (171-288)||(36020683-36020801)
chr8 (1-47)||(6376118-6376164)
chr8 (171-288)||(16709617-16709735)
chr8 (121-165)||(17799720-17799764)
[»] chr7 (59 HSPs)
chr7 (1-165)||(44016820-44016984)
chr7 (170-299)||(48456495-48456624)
chr7 (1-165)||(44010909-44011073)
chr7 (1-165)||(25351213-25351376)
chr7 (1-165)||(25356907-25357070)
chr7 (1-165)||(25409990-25410153)
chr7 (171-299)||(25500708-25500835)
chr7 (1-130)||(21369536-21369665)
chr7 (171-299)||(41453815-41453943)
chr7 (1-170)||(6067359-6067528)
chr7 (1-165)||(44144025-44144188)
chr7 (1-165)||(30246829-30246993)
chr7 (1-165)||(34547022-34547186)
chr7 (1-165)||(7464677-7464841)
chr7 (1-169)||(42006519-42006686)
chr7 (1-150)||(8378663-8378813)
chr7 (171-294)||(10861124-10861247)
chr7 (1-109)||(1099593-1099700)
chr7 (171-299)||(21900041-21900169)
chr7 (1-165)||(44512684-44512848)
chr7 (1-150)||(7069655-7069803)
chr7 (1-150)||(7074662-7074810)
chr7 (1-150)||(15541154-15541302)
chr7 (1-150)||(25405268-25405416)
chr7 (171-299)||(28602530-28602658)
chr7 (1-123)||(2120800-2120922)
chr7 (1-150)||(3320209-3320357)
chr7 (1-150)||(3324957-3325105)
chr7 (171-288)||(26603142-26603260)
chr7 (171-294)||(9641864-9641988)
chr7 (171-288)||(8184276-8184394)
chr7 (171-288)||(8191836-8191954)
chr7 (171-288)||(14288877-14288995)
chr7 (171-288)||(21643675-21643793)
chr7 (175-288)||(23613545-23613659)
chr7 (170-288)||(6019816-6019935)
chr7 (171-288)||(1380116-1380234)
chr7 (171-288)||(1386220-1386338)
chr7 (171-288)||(2447817-2447935)
chr7 (171-288)||(6796607-6796725)
chr7 (170-288)||(22853080-22853198)
chr7 (171-288)||(36876713-36876831)
chr7 (171-288)||(48346034-48346152)
chr7 (171-288)||(48352418-48352536)
chr7 (170-288)||(3923041-3923160)
chr7 (171-284)||(8141395-8141509)
chr7 (171-288)||(37027312-37027429)
chr7 (205-289)||(9704291-9704375)
chr7 (44-116)||(11081529-11081600)
chr7 (170-288)||(5048846-5048965)
chr7 (170-268)||(14300065-14300164)
chr7 (235-288)||(1947855-1947908)
chr7 (211-288)||(15953636-15953713)
chr7 (219-288)||(19090941-19091010)
chr7 (56-116)||(6048892-6048951)
chr7 (212-288)||(15925311-15925387)
chr7 (212-288)||(33849699-33849775)
chr7 (171-288)||(39434193-39434312)
chr7 (25-62)||(1099717-1099754)
[»] chr1 (42 HSPs)
chr1 (1-165)||(3091265-3091428)
chr1 (1-165)||(25133931-25134094)
chr1 (184-299)||(47295125-47295240)
chr1 (1-130)||(4144842-4144970)
chr1 (1-165)||(9526325-9526489)
chr1 (1-165)||(21353505-21353669)
chr1 (1-170)||(14996894-14997063)
chr1 (1-165)||(2393441-2393604)
chr1 (1-158)||(46783010-46783166)
chr1 (1-169)||(9521570-9521738)
chr1 (1-150)||(2232472-2232620)
chr1 (171-286)||(21818630-21818745)
chr1 (170-299)||(39807179-39807307)
chr1 (170-299)||(38671171-38671300)
chr1 (171-294)||(2823673-2823796)
chr1 (171-266)||(28412621-28412716)
chr1 (171-288)||(28997163-28997281)
chr1 (171-288)||(29002879-29002997)
chr1 (1-90)||(2401380-2401468)
chr1 (171-294)||(45023684-45023808)
chr1 (170-288)||(44242514-44242633)
chr1 (171-288)||(35086157-35086275)
chr1 (170-294)||(43687781-43687906)
chr1 (171-288)||(1115011-1115129)
chr1 (171-288)||(4600686-4600804)
chr1 (171-288)||(6239813-6239931)
chr1 (171-288)||(39052254-39052372)
chr1 (171-288)||(39058626-39058744)
chr1 (171-288)||(42093065-42093183)
chr1 (171-288)||(45016950-45017068)
chr1 (171-288)||(9870234-9870351)
chr1 (171-288)||(31073542-31073659)
chr1 (211-288)||(1175750-1175827)
chr1 (211-288)||(11912158-11912235)
chr1 (211-288)||(41304517-41304594)
chr1 (171-288)||(44917599-44917716)
chr1 (211-294)||(23761350-23761433)
chr1 (211-288)||(26622618-26622695)
chr1 (130-165)||(4144988-4145023)
chr1 (137-168)||(28279216-28279247)
chr1 (211-288)||(32798871-32798948)
chr1 (56-113)||(14352970-14353026)
[»] chr5 (47 HSPs)
chr5 (1-170)||(26406632-26406800)
chr5 (1-165)||(10627222-10627387)
chr5 (171-299)||(4693181-4693309)
chr5 (1-169)||(40222618-40222786)
chr5 (1-165)||(11962592-11962754)
chr5 (1-165)||(16093450-16093613)
chr5 (1-123)||(31782616-31782738)
chr5 (1-165)||(22672693-22672857)
chr5 (1-164)||(1240288-1240451)
chr5 (1-165)||(17841408-17841572)
chr5 (1-162)||(25837970-25838130)
chr5 (1-165)||(35385611-35385775)
chr5 (1-131)||(2298160-2298290)
chr5 (1-131)||(25452388-25452518)
chr5 (1-164)||(1170673-1170834)
chr5 (33-165)||(42238163-42238294)
chr5 (1-149)||(25445366-25445519)
chr5 (171-299)||(2153054-2153182)
chr5 (169-286)||(20900473-20900590)
chr5 (171-299)||(9844510-9844638)
chr5 (171-288)||(4974724-4974842)
chr5 (171-294)||(2823404-2823526)
chr5 (171-288)||(40957562-40957680)
chr5 (171-288)||(2440034-2440151)
chr5 (9-145)||(25562458-25562592)
chr5 (170-288)||(25893530-25893649)
chr5 (170-288)||(29981631-29981750)
chr5 (171-288)||(2959029-2959147)
chr5 (171-288)||(2967498-2967616)
chr5 (171-288)||(29975128-29975246)
chr5 (171-288)||(30021396-30021514)
chr5 (171-288)||(34356201-34356319)
chr5 (171-288)||(34357992-34358110)
chr5 (211-288)||(5877375-5877452)
chr5 (211-294)||(22314979-22315062)
chr5 (1-123)||(28786308-28786427)
chr5 (171-288)||(30579131-30579248)
chr5 (211-288)||(42151976-42152053)
chr5 (1-53)||(15445430-15445485)
chr5 (211-288)||(29413655-29413732)
chr5 (5-53)||(4897796-4897844)
chr5 (1-123)||(13295742-13295858)
chr5 (59-116)||(29748359-29748415)
chr5 (121-165)||(20718417-20718460)
chr5 (135-167)||(34034585-34034617)
chr5 (234-288)||(12504760-12504814)
chr5 (44-116)||(4754166-4754237)
[»] chr6 (52 HSPs)
chr6 (169-299)||(13735084-13735214)
chr6 (1-165)||(22352011-22352175)
chr6 (1-165)||(17695010-17695174)
chr6 (1-165)||(25466058-25466222)
chr6 (171-299)||(13556224-13556352)
chr6 (1-130)||(19702021-19702150)
chr6 (181-292)||(1052342-1052453)
chr6 (1-163)||(22342960-22343122)
chr6 (1-165)||(13467622-13467786)
chr6 (1-169)||(33215682-33215850)
chr6 (1-165)||(5165974-5166137)
chr6 (170-299)||(10080552-10080681)
chr6 (1-149)||(3577673-3577821)
chr6 (1-165)||(25941504-25941667)
chr6 (1-165)||(26643036-26643199)
chr6 (1-165)||(26749002-26749165)
chr6 (1-150)||(13878602-13878750)
chr6 (1-150)||(13883350-13883498)
chr6 (1-150)||(31248873-31249021)
chr6 (1-150)||(35201485-35201633)
chr6 (1-106)||(17035974-17036078)
chr6 (1-131)||(16785814-16785942)
chr6 (1-150)||(26887383-26887531)
chr6 (1-93)||(12166305-12166397)
chr6 (2-116)||(24542834-24542946)
chr6 (169-288)||(4668277-4668397)
chr6 (169-288)||(4675124-4675244)
chr6 (169-288)||(31549035-31549155)
chr6 (171-288)||(4737262-4737380)
chr6 (171-288)||(13670771-13670889)
chr6 (170-288)||(1427357-1427476)
chr6 (170-288)||(7061449-7061568)
chr6 (170-288)||(11065078-11065197)
chr6 (171-288)||(4019170-4019288)
chr6 (171-288)||(4025596-4025714)
chr6 (171-288)||(4717475-4717593)
chr6 (171-288)||(9863709-9863827)
chr6 (171-288)||(21261519-21261637)
chr6 (44-118)||(30445560-30445633)
chr6 (171-288)||(31128235-31128353)
chr6 (171-288)||(32327428-32327546)
chr6 (171-288)||(34649969-34650087)
chr6 (171-288)||(34656420-34656538)
chr6 (171-288)||(27671267-27671384)
chr6 (171-288)||(7068636-7068754)
chr6 (171-288)||(1166338-1166455)
chr6 (170-288)||(34710504-34710623)
chr6 (171-288)||(4189088-4189206)
chr6 (228-288)||(9847685-9847746)
chr6 (129-168)||(22858250-22858289)
chr6 (44-116)||(22858150-22858221)
chr6 (56-116)||(30443344-30443403)
[»] chr4 (53 HSPs)
chr4 (1-159)||(16638692-16638850)
chr4 (171-299)||(666536-666664)
chr4 (1-169)||(4569950-4570117)
chr4 (1-165)||(13072140-13072302)
chr4 (1-165)||(16489209-16489372)
chr4 (1-130)||(47566387-47566516)
chr4 (1-165)||(25699609-25699772)
chr4 (1-165)||(18586825-18586989)
chr4 (1-165)||(4556218-4556382)
chr4 (1-165)||(15831000-15831164)
chr4 (1-130)||(36771290-36771419)
chr4 (170-299)||(13002804-13002933)
chr4 (1-162)||(4884736-4884897)
chr4 (1-165)||(8529126-8529290)
chr4 (1-165)||(15316817-15316981)
chr4 (1-165)||(31300283-31300447)
chr4 (5-130)||(36769373-36769498)
chr4 (1-130)||(4558205-4558334)
chr4 (1-114)||(25614079-25614191)
chr4 (4-131)||(15312209-15312336)
chr4 (1-165)||(16689099-16689263)
chr4 (1-150)||(11853424-11853572)
chr4 (1-97)||(7050416-7050511)
chr4 (1-131)||(55822160-55822288)
chr4 (1-123)||(4874638-4874759)
chr4 (170-288)||(36753701-36753819)
chr4 (170-294)||(55461719-55461844)
chr4 (1-94)||(5336941-5337035)
chr4 (171-294)||(8105030-8105154)
chr4 (171-294)||(13595257-13595381)
chr4 (27-123)||(32274087-32274181)
chr4 (10-99)||(26557664-26557752)
chr4 (170-288)||(17458075-17458194)
chr4 (171-288)||(30239383-30239501)
chr4 (171-288)||(37355283-37355401)
chr4 (171-288)||(37367257-37367375)
chr4 (219-299)||(23542524-23542604)
chr4 (171-272)||(16406500-16406602)
chr4 (171-288)||(27591531-27591649)
chr4 (171-288)||(5659392-5659509)
chr4 (1-53)||(16185995-16186047)
chr4 (171-288)||(41374155-41374273)
chr4 (205-289)||(13570558-13570642)
chr4 (5-99)||(3982342-3982434)
chr4 (56-116)||(9022369-9022428)
chr4 (44-116)||(10112934-10113005)
chr4 (233-288)||(30210585-30210640)
chr4 (217-271)||(7781501-7781555)
chr4 (135-171)||(22295149-22295185)
chr4 (205-286)||(49358610-49358692)
chr4 (135-168)||(9022306-9022339)
chr4 (132-165)||(36769306-36769339)
chr4 (44-116)||(38208880-38208951)
[»] scaffold0012 (1 HSPs)
scaffold0012 (171-292)||(203135-203256)
[»] chr2 (51 HSPs)
chr2 (170-299)||(43670887-43671016)
chr2 (1-165)||(17943397-17943560)
chr2 (171-294)||(3363378-3363501)
chr2 (1-165)||(22712675-22712839)
chr2 (1-165)||(37170911-37171075)
chr2 (1-165)||(12781380-12781543)
chr2 (1-165)||(38190857-38191020)
chr2 (1-165)||(30478853-30479017)
chr2 (1-165)||(20050181-20050345)
chr2 (1-165)||(20054924-20055088)
chr2 (1-165)||(27517798-27517964)
chr2 (23-165)||(35894442-35894584)
chr2 (1-150)||(17932507-17932657)
chr2 (1-149)||(33674564-33674713)
chr2 (1-150)||(2736080-2736228)
chr2 (1-150)||(2740816-2740964)
chr2 (1-150)||(17462311-17462459)
chr2 (1-150)||(39686858-39687006)
chr2 (1-150)||(45567284-45567432)
chr2 (1-150)||(22717384-22717534)
chr2 (1-150)||(39679920-39680068)
chr2 (162-269)||(11908839-11908946)
chr2 (3-169)||(33603844-33604015)
chr2 (170-294)||(15853699-15853824)
chr2 (170-299)||(41456792-41456921)
chr2 (1-123)||(30261932-30262052)
chr2 (171-294)||(42930329-42930453)
chr2 (170-288)||(39505290-39505409)
chr2 (171-288)||(29486013-29486131)
chr2 (171-294)||(36781131-36781255)
chr2 (170-288)||(12951967-12952086)
chr2 (170-288)||(34833746-34833865)
chr2 (170-288)||(43269017-43269136)
chr2 (171-288)||(13900908-13901026)
chr2 (171-288)||(34840191-34840309)
chr2 (170-288)||(45013152-45013271)
chr2 (171-288)||(2158780-2158898)
chr2 (171-288)||(2165196-2165314)
chr2 (211-288)||(2020434-2020511)
chr2 (211-288)||(16816325-16816402)
chr2 (211-288)||(16855482-16855559)
chr2 (1-53)||(20589734-20589786)
chr2 (212-288)||(21340928-21341004)
chr2 (1-48)||(28458988-28459035)
chr2 (1-75)||(45158257-45158331)
chr2 (44-123)||(30720820-30720898)
chr2 (211-288)||(21066914-21066991)
chr2 (44-127)||(27248111-27248193)
chr2 (56-116)||(39287195-39287254)
chr2 (44-116)||(43139363-43139434)
chr2 (137-169)||(28462589-28462621)
[»] chr3 (52 HSPs)
chr3 (1-165)||(47883041-47883204)
chr3 (171-299)||(4507568-4507696)
chr3 (3-165)||(5858405-5858567)
chr3 (1-165)||(47878330-47878494)
chr3 (1-165)||(10949419-10949581)
chr3 (1-165)||(11079377-11079540)
chr3 (1-165)||(27762145-27762307)
chr3 (1-165)||(54193084-54193249)
chr3 (1-165)||(4535473-4535637)
chr3 (1-169)||(13893317-13893485)
chr3 (1-165)||(38002728-38002892)
chr3 (1-150)||(29914112-29914262)
chr3 (1-150)||(22626143-22626292)
chr3 (5-165)||(10612941-10613101)
chr3 (1-162)||(16996737-16996898)
chr3 (1-149)||(10896880-10897028)
chr3 (9-125)||(3329792-3329908)
chr3 (1-165)||(10595193-10595354)
chr3 (1-165)||(54188367-54188532)
chr3 (1-150)||(6303185-6303333)
chr3 (1-150)||(10094233-10094381)
chr3 (1-150)||(10100250-10100398)
chr3 (1-150)||(10201113-10201261)
chr3 (1-150)||(16462076-16462226)
chr3 (1-164)||(20031477-20031636)
chr3 (1-150)||(27544147-27544296)
chr3 (1-150)||(10208159-10208307)
chr3 (170-288)||(20649852-20649970)
chr3 (171-299)||(4591945-4592073)
chr3 (67-165)||(48390444-48390543)
chr3 (3-141)||(7417953-7418085)
chr3 (171-294)||(25894376-25894500)
chr3 (170-288)||(24180231-24180350)
chr3 (10-123)||(15823778-15823889)
chr3 (171-287)||(47442147-47442263)
chr3 (170-288)||(27500901-27501020)
chr3 (171-288)||(9575941-9576059)
chr3 (182-288)||(10940134-10940240)
chr3 (217-288)||(4310474-4310545)
chr3 (170-288)||(9569467-9569586)
chr3 (1-170)||(26762888-26763061)
chr3 (11-169)||(46966817-46966968)
chr3 (171-288)||(6037439-6037557)
chr3 (171-285)||(43932789-43932903)
chr3 (10-123)||(27703338-27703450)
chr3 (170-288)||(43996322-43996440)
chr3 (211-288)||(32747526-32747603)
chr3 (59-116)||(7768561-7768617)
chr3 (211-288)||(23069646-23069723)
chr3 (132-168)||(3329717-3329753)
chr3 (131-165)||(7417706-7417740)
chr3 (135-169)||(11007974-11008008)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-165)||(188401-188565)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-165)||(17145-17309)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-150)||(16198-16348)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-150)||(31016-31164)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-150)||(224694-224842)
[»] scaffold0265 (1 HSPs)
scaffold0265 (171-286)||(14064-14179)
[»] scaffold0475 (1 HSPs)
scaffold0475 (169-288)||(9013-9133)
[»] scaffold0510 (2 HSPs)
scaffold0510 (170-288)||(2181-2300)
scaffold0510 (211-288)||(7878-7955)
[»] scaffold1764 (1 HSPs)
scaffold1764 (70-150)||(1309-1391)
[»] scaffold0536 (1 HSPs)
scaffold0536 (171-288)||(11301-11419)
[»] scaffold0053 (2 HSPs)
scaffold0053 (171-288)||(50859-50977)
scaffold0053 (211-288)||(71595-71672)
[»] scaffold0343 (1 HSPs)
scaffold0343 (170-288)||(3972-4090)
[»] scaffold0043 (1 HSPs)
scaffold0043 (171-288)||(3940-4058)
[»] scaffold0513 (1 HSPs)
scaffold0513 (211-288)||(11132-11209)


Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 2267182 - 2267480
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2267182 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaaccgtagtgtttgttgccaagagaaattctctataaaccctagtttgta 2267281  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaagctgataagtgccagaaagtagtatttcaaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2267282 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaagctgataagtgctagaaagtagtatttcaaat 2267381  T
Q  201 gattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttattcatctcactc 299  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2267382 gattatttacgacacgtttgttacttatttcacaagttattcaggaaaaagccgagagaaaagtgattattgacctattacgctttattcatcttactc 2267480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 30423235 - 30423069
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||     
T  30423235 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcagccctagtgtttgttgccaagagaaattctctataaaccctagtttgtt 30423136  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaagc 170  Q
    |||||||||||||||| |||||||||  ||||||||||||| ||||||||| ||||||||| ||||||||    
T  30423135 tgttggcttctaaaccctgttttcta--cacatattcatctaatacaaggtgtatatttat-gtgaaagc 30423069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9021266 - 9021434
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||  |||  ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  9021266 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatccgaaccctagtgtt-gttgcaaagagaaattctctataaaccctagtttgta 9021364  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  9021365 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtgaaag 9021434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 21033893 - 21033729
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| |||   ||||||| |||||||||||| ||| ||||||||||||||||||||    
T  21033893 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaagcctagtgtt-gttgccaagagaaattatctataaaccctagtttgta 21033795  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  21033794 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 21033729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 33032677 - 33032549
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  33032677 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 33032579  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    ||||||||||||||||||||||||||||||    
T  33032578 tgttggcttctaaaccatgttttctacaca 33032549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 38658425 - 38658300
Alignment:
Q  174 taagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattga 273  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||    
T  38658425 taagtgccagaaattactatttcaaatgattatttacggcacgtttgttactagtttcacaaattattcagggaaaagccaagagaaaagtgattattga 38658326  T
Q  274 cctattacgctttattcatctcactc 299  Q
    ||||||||||||||||||||| ||||    
T  38658325 cctattacgctttattcatcttactc 38658300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23179720 - 23179884
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  23179720 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 23179818  T
Q  101 tgttggcttctaaaccatgtttt-ctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||| |||| |   | |||||||||||||||  ||||||||||||||    
T  23179819 tgttggcttctaaaccctgtttttctactcttcttttcatctgatacaagacttatatttatagtg 23179884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29554944 - 29555111
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||| |||||||||||||||    
T  29554944 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctaaaaaccctagtttgta 29555042  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtgaaa 168  Q
    || ||| ||||||||| || |||||||||||| |  ||||||||||||| | |||||||||||||||||    
T  29555043 tgatggtttctaaaccctgtttttctacacactttatcatctgatacaacgcttatatttatagtgaaa 29555111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 590817 - 590653
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||   |||||| |||||||||||| ||||||||||||||||||||||||    
T  590817 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaacccaagtgtt-gttgccaagagaaattctctataaaccctagtttgta 590719  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||| | |  ||||||||||||||| ||| ||||||||||    
T  590718 tgttggtttctaaaccctgtttttctacactctttatcatctgatacaaggcttagatttatagtg 590653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 26268395 - 26268517
Alignment:
Q  7 tcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttgg 106  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| ||    
T  26268395 tcaatcttaatagtgttttgttcaaggtgaatcaaaacaatctcaactctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatgtagg 26268493  T
Q  107 cttctaaaccatgttttctacaca 130  Q
    |||||||||| |||||| ||||||    
T  26268494 cttctaaaccttgttttttacaca 26268517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28895525 - 28895375
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  28895525 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 28895427  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||| ||||||||| || |||||||||| | | | |||||||||||||||    
T  28895426 tgttggtttctaaaccttgtttttctacacccttttatcatctgatacaagg 28895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 5062984 - 5063101
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||||||||| ||| ||||||||||||||||||||       ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  5062984 tgataagtgccagaatgtactatttcaaatgattatttaca------ttgttacttgtttcacaagttattcagggaaaagccgggagaaaagtgattat 5063077  T
Q  271 tgacctattacgctttattcatct 294  Q
    ||||||||||||||||||||||||    
T  5063078 tgacctattacgctttattcatct 5063101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 17799583 - 17799709
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||| |||||| ||| | |||||||||||| |||||||||||    
T  17799583 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgcctagacaaattctctataaatcctagtttgta 17799681  T
Q  101 tgttggcttctaaaccatgttttctaca 128  Q
    |||||||||||||||| |||||||||||    
T  17799682 tgttggcttctaaaccctgttttctaca 17799709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3276367 - 3276200
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| || ||||||||||||| ||||  | | | ||||||| |||| | ||||||||||||||||||||| |     
T  3276367 agagactcaatcctaatagtgctttgttcaaggtaaatcaaaacaatcccaaccctggag-ttgttgcaaagaaaaattctctataaaccctagtttttg 3276269  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtgaaa 168  Q
    |||||||||||||||| || |||||||||||| |  |||||| |||||||| |||||||||||||||||    
T  3276268 tgttggcttctaaaccctgtttttctacacactttatcatctaatacaaggcttatatttatagtgaaa 3276200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28327931 - 28327783
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  28327931 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 28327833  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  28327832 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 28327783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 15949557 - 15949389
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||  ||||||| |||||||||||||| ||||||| |||||||| |||   ||||||||||||  |||||| ||||||| |||||||||||||||     
T  15949557 agagactatatcctaatagtgttttgttcaaggtgaatccaaacaatcacaaacctagtgtttgttgtaaagaga-attctctgtaaaccctagtttgtg 15949459  T
Q  101 tgttggcttctaaaccatgttttctacacaca-tattcatctgatacaaggtttatatttatagtgaaagc 170  Q
    ||||||||| |||||| |||||| | | |||| | ||||||||||||||| ||||||||||||||||||||    
T  15949458 tgttggcttttaaaccctgtttt-tcctcacacttttcatctgatacaagatttatatttatagtgaaagc 15949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16752681 - 16752830
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  16752681 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 16752779  T
Q  101 tgttggcttctaaaccatg--ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| ||  |||||||||||| | | |||||||||||||||    
T  16752780 tgttgg--tctaaaccttgttttttctacacacttttatcatctgatacaagg 16752830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 4812648 - 4812794
Alignment:
Q  3 agactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatg 102  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| ||||||||| ||||||||||||| ||    
T  4812648 agactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctatgaaccctagtttgtttg 4812746  T
Q  103 ttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  4812747 ttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 4812794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16757426 - 16757575
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||| ||||||| |||||||||||||||||||||||     
T  16757426 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgtcaagagagattctctataaaccctagtttgtt 16757524  T
Q  101 tgttggcttctaaaccatg--ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| ||  |||||||||||| | | |||||||||||||||    
T  16757525 tgttgg--tctaaaccttgttttttctacacacttttatcatctgatacaagg 16757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25684666 - 25684504
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||| |||||||||| |||| ||||||||| |||||||||||||||| ||||  ||| ||| ||||| |||||| |||||||||||||||||||||||     
T  25684666 agagattcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgctaagagagattctctataaaccctagtttgtt 25684568  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaaggtttatatttatagtg 165  Q
    ||||||  |||||||| || |||||||||||| | | ||||||||||||||| || |||||||||||    
T  25684567 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg-ttgtatttatagtg 25684504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28332654 - 28332506
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | ||||| |||||||| ||||| |||||||||||||||||     
T  28332654 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttaccaagagagattctttataaaccctagtttgtt 28332556  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    | ||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  28332555 tattgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 28332506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 15944869 - 15944728
Alignment:
Q  28 tcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaaccatg-ttttcta 126  Q
    |||| |||||||||| |||||  |||  ||||||||||||||||||||  |||||||||||||||| ||||| |||| ||||||||||| || ||||| |    
T  15944869 tcaaggtgaatcaaagcaatcagaaccctagtgtttgttgccaagagat-ttctctataaaccctaatttgtttgttagcttctaaaccctgtttttcca 15944771  T
Q  127 cacacatattcatctgatacaaggtttatatttatagtgaaagc 170  Q
    ||||| | ||||| ||||||||||||||||| ||||||||||||    
T  15944770 cacac-ttttcatatgatacaaggtttatatctatagtgaaagc 15944728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 7932871 - 7932999
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| | | ||||||| ||| ||| | ||||||||||||||||||| |||| ||| |||||||||  ||||||||||||||||||||  || | |    
T  7932871 tgataagtgtcgggaagtagtgttttaaaggtttatttacggcacgtttgtaacttgttttacaagttatctagggaaaagccgagagaaaatggaattt 7932970  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||| |||||| ||||    
T  7932971 tgacctattacgctttagtcatcttactc 7932999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 15013759 - 15013641
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| ||||||| |||||| |||||| |||| |  |||| |||||||||| |||  ||||||||| |||||||| |||||||| |||||||||    
T  15013759 ctgataagtgctagaaagttgtattttaaatgaatattcaaagcacttttgttacttgttttgcaagttattgagggaaaaaccgagagataagtgatta 15013660  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  15013659 ttgcccttttacgctttat 15013641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 17847701 - 17847528
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||| |||||||||| ||||||| |||||| |||||||||||||||| ||||  |||||||||||||| ||||| | |||||||||||| ||||||||     
T  17847701 agagattcaatcctaatagtgtttcgttcaaggtgaatcaaaacaatcccaaccatagtgtttgttgcctagaga-aatctctataaaccttagtttgt- 17847604  T
Q  101 tgttggcttctaaaccatg-ttttctacac---acatatt---catctgatacaaggtttatatttatagtgaaag 169  Q
    ||||   ||||||||| || |||||||| |   |||| ||   ||||||||||||||| |||||||||||| ||||    
T  17847603 tgttcatttctaaaccttgtttttctactctctacatgttttgcatctgatacaaggtctatatttatagtaaaag 17847528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 45067396 - 45067519
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| |||||| |||||| |||| |  |||| ||| |||||| |||  ||||||||| ||||||||||||||||| ||||||||||    
T  45067396 tgataagtgctagaaagttgtattttaaatgaatattcaaagcacttttattacttgttttgcaagttattgagggaaaagccgagagataagtgattat 45067495  T
Q  271 tgacctattacgctttattcatct 294  Q
    |  ||| |||||||||||| ||||    
T  45067496 tacccttttacgctttatttatct 45067519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 11357159 - 11357277
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| ||| |||||||||| ||||||||||||||| | |||||||||    
T  11357159 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttacaagttattgagggaaaagccgagaaataagtgatta 11357258  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  11357259 ttgcccttttacgctttat 11357277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 36424613 - 36424731
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  36424613 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 36424712  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  36424713 ttgcccttttacgctttat 36424731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 12770150 - 12770027
Alignment:
Q  163 gtgaaagctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaa 262  Q
    |||||||||||||||||| ||||||| |||||| |||||||  |||| ||||| | |||| ||| |||  ||||||||| ||||||||||||||| | ||    
T  12770150 gtgaaagctgataagtgctagaaagttgtattttaaatgatatttta-ggcacttgtgtt-cttgttttgcaagttattgagggaaaagccgagatataa 12770053  T
Q  263 gtgattattgacctattacgctttat 288  Q
    |||||||||| ||| |||||||||||    
T  12770052 gtgattattgcccttttacgctttat 12770027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 6463510 - 6463629
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  6463510 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 6463609  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  6463610 attgcccttttacgctttat 6463629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 36004418 - 36004537
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  36004418 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 36004517  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  36004518 attgcccttttacgctttat 36004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 7312634 - 7312516
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  7312634 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 7312535  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  7312534 ttgcccttttacgctttat 7312516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 8012255 - 8012373
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  8012255 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 8012354  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  8012355 ttgcccttttacgctttat 8012373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28228537 - 28228416
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||| ||| ||||||| |||||||||||||| |||||| | |||| |   |||  |||||||||||||||| ||| |||||||||||||| |||||| |     
T  28228537 agagtctctatcctaatagtgttttgttcaaggtgaataacaacagttctaaccatagtgtttgttgccaaaaga-attctctataaaccttagtttatt 28228439  T
Q  101 tgttggcttctaaaccatgtttt 123  Q
    ||||| |||||||||||||||||    
T  28228438 tgttgccttctaaaccatgtttt 28228416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 36077252 - 36077134
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  36077252 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 36077153  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  36077152 ttgcccttttacgctttat 36077134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 36020683 - 36020801
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| |||||||||| |||| | |||||||||    
T  36020683 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagctgagaaataagtgatta 36020782  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  36020783 ttgcccttttacgctttat 36020801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6376164 - 6376118
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaat 47  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||    
T  6376164 agagactcaatcttaacagtgttttgttcaaggtgaatcaaaacaat 6376118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 16709617 - 16709735
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  |||||||||  || ||||||||||| | |||||||||    
T  16709617 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattacggaaaaagccgagaaataagtgatta 16709716  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  16709717 ttgcccttttacgctttat 16709735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 17799720 - 17799764
Alignment:
Q  121 tttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||| |||||||||| |||||||||||||||||||    
T  17799720 tttctacacacataatcatctgatataaggtttatatttatagtg 17799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 9e-67; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 44016820 - 44016984
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  44016820 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaaccctagtttgta 44016919  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44016920 tgttggcttctaaaccctgttttctacacacataatcatctgatacaaggtttatatttatagtg 44016984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 48456624 - 48456495
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  48456624 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttgtttcacaagttattcaggaaaaagccgagagaaaagtgatta 48456525  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||||||||||| ||||    
T  48456524 ttgacctattacgctttattcatcttactc 48456495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 44010909 - 44011073
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||  |||||||||||||||||| | |||||||||||||| |||||||||    
T  44010909 agagactcaatcctaatagtgctttgttcaaggtggatcaaaacaatcccaaccctagtgtttgttgccaagaaaaattctctataaaccatagtttgta 44011008  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44011009 tgttggcttctaaaccctgttttctacacacataatcatctgatacaaggtttatatttatagtg 44011073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25351376 - 25351213
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25351376 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 25351278  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||| |  |||||||||| |||| ||||||||||||||    
T  25351277 tgttggcttctaaaccctgttttctacacactttatcatctgatataaggcttatatttatagtg 25351213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25357070 - 25356907
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25357070 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 25356972  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||| |  |||||||||| |||| ||||||||||||||    
T  25356971 tgttggcttctaaaccctgttttctacacactttatcatctgatataaggcttatatttatagtg 25356907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25410153 - 25409990
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25410153 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 25410055  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||| |  ||||||||||||||| ||||||||||||||    
T  25410054 tgttggcttctaaaccctgttttctacacactttatcatctgatacaaggcttatatttatagtg 25409990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 25500835 - 25500708
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  25500835 tgataagtgccagaaagtagtatttcaaatgattatttacgacacgtttgttatttgtttcacaagttattca-ggaaaagccgagagaaaagtgattat 25500737  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||| |||||||||| ||||    
T  25500736 tgacctattacgccttattcatcttactc 25500708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 21369665 - 21369536
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||  || |||||||||||||||||  |||||||||||||||||||||||    
T  21369665 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctaatgtttgttgccaagagaatttctctataaaccctagtttgta 21369566  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    |||||||||||||||| |||||||||||||    
T  21369565 tgttggcttctaaaccctgttttctacaca 21369536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 41453815 - 41453943
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| |||||| |||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  41453815 tgataagtgtcagaaaatagtatttcaaatgattatttatggtacgtttgttacttgtttcaaaagttattcagggaaaagccgagagaaaagtgattat 41453914  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||||| |||| ||||    
T  41453915 tgacctattacgctttattaatcttactc 41453943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6067359 - 6067528
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaa-caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    ||||||| ||||||| || |||||||||||| ||||||||||| ||||| ||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  6067359 agagactaaatcctatcaatgttttgttcaaggtgaatcaaaaacaatcccaaccctagtgtttgttaccaagaga-attctctataaaccctagtttgt 6067457  T
Q  100 atgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaagc 170  Q
     ||||||||||||||||||||||||| ||||| | ||||||||||||| | |||||||||||||| |||||    
T  6067458 ttgttggcttctaaaccatgttttcttcacacgttttcatctgatacaggatttatatttatagtaaaagc 6067528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 44144025 - 44144188
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||  |||  ||||||| |||||||||| | ||||||||||||||||||||||||    
T  44144025 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcataaccctagtgtt-gttgccaagaaaaattctctataaaccctagtttgta 44144123  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||| |  || |||||||||||  ||||||||||||||    
T  44144124 tgttggcttctaaaccttgttttctacacactttatcgtctgatacaagacttatatttatagtg 44144188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 30246993 - 30246829
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||| |||||||||||||||||||||       
T  30246993 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccgtagtgtt-gttgccaagagaaattctctataaaccctagttttgt 30246895  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||| ||||| |  ||||||||||||||| ||||||||||||||    
T  30246894 tgttggcttctaaaccctgtttttctccacactttatcatctgatacaaggcttatatttatagtg 30246829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 34547022 - 34547186
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| | ||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  34547022 agagactcaatcctaatagtgctctgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 34547120  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||  ||||||||||||||    
T  34547121 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaagacttatatttatagtg 34547186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 7464677 - 7464841
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||  |||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  7464677 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatccaaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 7464775  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||||| |||||| || |||||||||||| |  |||||| |||||||  ||||||||||||||    
T  7464776 tgttggcttttaaaccctgtttttctacacactttatcatcttatacaagacttatatttatagtg 7464841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 42006686 - 42006519
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||| || ||||||||||| ||| |||||||||| ||||||||     
T  42006686 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttcttgccaagagaaattttctataaaccatagtttgtt 42006588  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||||||||||||| || |||||||||||  | ||||||| ||||| |||||||||||||||| ||||    
T  42006587 tgttggcttctaaaccctgtttttctacaca-tttttcatcttatacacggtttatatttatagtaaaag 42006519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8378663 - 8378813
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  8378663 agagactcaatcttaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 8378761  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||| ||||||||| || |||||||||||| | | |||||||||||||||    
T  8378762 tgttggtttctaaaccttgtttttctacacacttttatcatctgatacaagg 8378813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 10861124 - 10861247
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| || ||||||| ||| ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| | |    
T  10861124 tgataagtgctaggaagtagtgttttaaatgtttatttacggcacgtttgttacttgtttcacaagttatctagggaaaagccgagagaaaagtgaattt 10861223  T
Q  271 tgacctattacgctttattcatct 294  Q
    ||||||||||||||||| ||||||    
T  10861224 tgacctattacgctttagtcatct 10861247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1099593 - 1099700
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  1099593 agagagtcaatcctaatagtgttttgttcaacgtgaatcaaaacaatttcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 1099691  T
Q  101 tgttggctt 109  Q
    |||||||||    
T  1099692 tgttggctt 1099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 21900041 - 21900169
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| ||| ||||||| ||| ||| | ||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||||||| | |    
T  21900041 tgataagtgtcaggaagtagtgttttaaaggtttatttacggcacatttgttacttgtttcacaagttatctagggaaaagccgagagaaaagtgaattt 21900140  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||| |||||||||||    
T  21900141 tgacctattacgctttagtcatctcactc 21900169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 44512684 - 44512848
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactg-tagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||   ||||||| ||||| |||| | |||||||||||||||||||||||    
T  44512684 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaacccctagtgtt-gttgcaaagaaa-attctctataaaccctagtttgt 44512781  T
Q  100 atgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||| ||||||||| || |||||||||||| |  |||||| |||||||| ||||||||||||||    
T  44512782 atgttggtttctaaaccctgtttttctacacactttatcatcttatacaaggcttatatttatagtg 44512848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7069803 - 7069655
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  7069803 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 7069705  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  7069704 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 7069655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7074810 - 7074662
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  7074810 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 7074712  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  7074711 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 7074662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15541154 - 15541302
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  15541154 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 15541252  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  15541253 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 15541302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25405416 - 25405268
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  25405416 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 25405318  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  25405317 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 25405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 28602530 - 28602658
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| ||| |||| |||||| ||||| ||||||| |||||||||||||||| ||| |||||||||  ||||||||||||| |||||||||| | |    
T  28602530 tgataagtgtcaggaagtggtattttaaatgtttatttatggcacgtttgttacttgttttacaagttatctagggaaaagccgaaagaaaagtgaattt 28602629  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||| |||||| ||||    
T  28602630 tgacctattacgctttagtcatcttactc 28602658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2120922 - 2120800
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaa-aacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    |||||||||||||||| |||||||||| ||| ||||||||| ||||||| ||||  ||| ||| |||||||||||| | |||||||||||||||||||||    
T  2120922 agagactcaatcctaatagtgttttgtccaaggtgaatcaacaacaatcccaaccctagagtt-gttgccaagagaaaatctctataaaccctagtttgt 2120824  T
Q  100 atgttggcttctaaaccatgtttt 123  Q
    ||||||||||||||||| ||||||    
T  2120823 atgttggcttctaaaccttgtttt 2120800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3320209 - 3320357
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||| ||| |||||||||||||||||||||||     
T  3320209 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaatagagattctctataaaccctagtttgtt 3320307  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||   |||||||| || |||||||||||| | | |||||||||||||||    
T  3320308 tgttg--atctaaaccttgtttttctacacacttttatcatctgatacaagg 3320357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3324957 - 3325105
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||| ||| |||||||||||||||||||||||     
T  3324957 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaatagagattctctataaaccctagtttgtt 3325055  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||   |||||||| || |||||||||||| | | |||||||||||||||    
T  3325056 tgttg--atctaaaccttgtttttctacacacttttatcatctgatacaagg 3325105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 26603260 - 26603142
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  26603260 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 26603161  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  26603160 ttgcccttttacgctttat 26603142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 9641864 - 9641988
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| |||||||||    
T  9641864 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatta 9641963  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| |||||||||||| ||||    
T  9641964 ttgcccttttacgctttatttatct 9641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 8184276 - 8184394
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  8184276 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 8184375  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  8184376 ttgcccttttacgctttat 8184394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 8191836 - 8191954
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  8191836 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 8191935  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  8191936 ttgcccttttacgctttat 8191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 14288995 - 14288877
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  14288995 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 14288896  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  14288895 ttgcccttttacgctttat 14288877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 21643793 - 21643675
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| ||||| |||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  21643793 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgtgacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 21643694  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  21643693 ttgcccttttacgctttat 21643675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 288
Target Start/End: Complemental strand, 23613659 - 23613545
Alignment:
Q  175 aagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattga 273  Q
    |||||| ||||||| |||||| ||||||| |||||  | ||| |||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||     
T  23613659 aagtgctagaaagttgtattttaaatgatatattttagacacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattattgc 23613560  T
Q  274 cctattacgctttat 288  Q
    ||| |||||||||||    
T  23613559 ccttttacgctttat 23613545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 6019816 - 6019935
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| |||||||  ||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  6019816 ctgataagtgctagaaagttttattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatt 6019915  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  6019916 attgcccttttacgctttat 6019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 1380234 - 1380116
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  1380234 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 1380135  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  1380134 ttgcccttttacgctttat 1380116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 1386338 - 1386220
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  1386338 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 1386239  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  1386238 ttgcccttttacgctttat 1386220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 2447935 - 2447817
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  2447935 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 2447836  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  2447835 ttgcccttttacgctttat 2447817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 6796725 - 6796607
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  6796725 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 6796626  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  6796625 ttgcccttttacgctttat 6796607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 22853080 - 22853198
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| ||||||| |||||| |||| | |||| |  |||| ||| |||||| |||  ||||||||| ||||||||||||||||| | |||||||    
T  22853080 ctgataagtgctagaaagttgtattttaaattaatattcaaagcacttttattacttgttttgcaagttattgagggaaaagccgagagataggtgatta 22853179  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  22853180 ttgcccttttacgctttat 22853198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 36876831 - 36876713
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  36876831 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 36876732  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  36876731 ttgcccttttacgctttat 36876713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 48346034 - 48346152
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  48346034 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 48346133  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  48346134 ttgcccttttacgctttat 48346152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 48352418 - 48352536
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  48352418 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 48352517  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  48352518 ttgcccttttacgctttat 48352536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 3923041 - 3923160
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  |||||||||  |||||||||||||| | ||||||||    
T  3923041 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattacgggaaaagccgagaaataagtgatt 3923140  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  3923141 attgcccttttacgctttat 3923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 8141395 - 8141509
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  8141395 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 8141494  T
Q  270 ttgacctattacgct 284  Q
    ||| ||| |||||||    
T  8141495 ttgcccttttacgct 8141509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 37027429 - 37027312
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| |||||| |||| | |||| |  |||| ||| |||||| |||  ||||||||| ||||||||||||||||| ||| ||||||    
T  37027429 tgataagtgctagaaagttgtattttaaattaatattcaaagcacttttattacttgttttgcaagttattgagggaaaagccgagagataagcgattat 37027330  T
Q  271 tgacctattacgctttat 288  Q
    || ||| ||| |||||||    
T  37027329 tgcccttttatgctttat 37027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 9704375 - 9704291
Alignment:
Q  205 atttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttatt 289  Q
    ||||| ||||| |||||||||| | | |||||||||| ||| ||||||||||| |||  ||||||||| ||||||||||||||||    
T  9704375 atttaaggcacttttgttacttgtcttacaagttatttaggaaaaagccgagaaaaagatgattattgccctattacgctttatt 9704291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 11081600 - 11081529
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||  |||||||||||||||||||| |||||||| ||||||||||||   ||||||||||||||||    
T  11081600 caatctcaaccctagtgtttgttgccaagaga-attctctacaaaccctagttttgttgttggcttctaaacc 11081529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 5048846 - 5048965
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||  |||||||||| |||   |||||||| ||||||||||||||| | ||||||||    
T  5048846 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcatttttgttacttgttttgtaagttattaagggaaaagccgagaaataagtgatt 5048945  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  5048946 attgcccttttacgctttat 5048965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 14300164 - 14300065
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  14300164 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatt 14300065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 1947855 - 1947908
Alignment:
Q  235 agttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||    
T  1947855 agttattgagggaaaagccgagagataagtgattattgcccttttacgctttat 1947908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 15953713 - 15953636
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| |||||||| |||||||| |||||||||||  ||| |||||||||||    
T  15953713 ggcacttttgttacttgttttgcaagttattgagggaaaacccgagagataagtgattatttcccttttacgctttat 15953636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 19091010 - 19090941
Alignment:
Q  219 tgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    |||||||| |||  ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  19091010 tgttacttgttttgcaagttattgagggaaaagccgagagataagtgattatttcccttttacgctttat 19090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 6048951 - 6048892
Alignment:
Q  56 tagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    |||||||||||||||||||| ||||| || ||||||||||||  |||||||||||||||||    
T  6048951 tagtgtttgttgccaagaga-attctttacaaaccctagttttgatgttggcttctaaacc 6048892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 15925387 - 15925311
Alignment:
Q  212 gcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    |||| ||||||| || |||  ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  15925387 gcacttttgttatttgttttgcaagttattgagggaaaagccgagagataagtgattatttcccttttacgctttat 15925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 33849699 - 33849775
Alignment:
Q  212 gcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    |||| |||||||||| |||  |||||| || ||| ||||||||||||| |||||||||||  ||| |||||||||||    
T  33849699 gcacttttgttacttgttttgcaagtttttgaggcaaaagccgagagataagtgattattacccttttacgctttat 33849775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 39434312 - 39434193
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| |||| |  |||| |  |||| ||| |||||| |||  ||||||||| ||||||||||||||||| | |||||||    
T  39434312 tgataagtgctagaaagttgtattttaaattaaatattcaaagcacttttattacttgttttgcaagttattgagggaaaagccgagagataggtgatta 39434213  T
Q  270 ttgacc-tattacgctttat 288  Q
    ||| || | |||||||||||    
T  39434212 ttgccctttttacgctttat 39434193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 1099717 - 1099754
Alignment:
Q  25 tgttcaacgtgaatcaaaacaatctcaactgtagtgtt 62  Q
    |||||||||||||||||||||||||||||  |||||||    
T  1099717 tgttcaacgtgaatcaaaacaatctcaaccctagtgtt 1099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 3091265 - 3091428
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||    
T  3091265 agagactcaatcctagcggtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccctagtttgta 3091364  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3091365 tgttggcttctaaaccctgttttctacacacatattcatctgatacaagg-ttatatttatagtg 3091428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25134094 - 25133931
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25134094 agagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcacaaccatagtgtt-gttgccaagagaaattctctataaaccctagtttgta 25133996  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||  |  ||||||||||||||  ||||||||||||||    
T  25133995 tgttggcttctaaaccctgttttctacacattttatcatctgatacaagacttatatttatagtg 25133931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 299
Target Start/End: Complemental strand, 47295240 - 47295125
Alignment:
Q  184 aaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgc 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  47295240 aaagtagtatttcaaatgattatttacggcacgtttgttacttgtttcacaagttattcagggaaaagccgagagaaaagtgattattgatctattacgt 47295141  T
Q  284 tttattcatctcactc 299  Q
    ||||||||||| ||||    
T  47295140 tttattcatcttactc 47295125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4144842 - 4144970
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||    
T  4144842 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgttt-ttgccaagagaaattctctataaaccctagtttgta 4144940  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    |||||||||||||||| |||||||||||||    
T  4144941 tgttggcttctaaaccctgttttctacaca 4144970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9526489 - 9526325
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  9526489 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 9526391  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  9526390 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 9526325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 21353505 - 21353669
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| ||||  |||||||| |||||||||||||||| ||||  ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  21353505 agagactcaatcctaatagtgcgttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttaccaagagaaattctctataaaccctagtttgta 21353603  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  21353604 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 21353669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14997063 - 14996894
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||  |||||||| || |||||||| ||||| |||||||||||||||||     
T  14997063 agagactcaatcctaacagtgttttgttcaaggtgaataaaaacaatcccaaccctagtgtttattaccaagaga-attctttataaaccctagtttgtt 14996965  T
Q  101 tgttggcttctaaaccatgttttctacacac-atattcatctgatacaaggtttatatttatagtgaaagc 170  Q
    |||||||||||||||| ||||||||||||||  | ||||  | |||||| |||||||||||||||||||||    
T  14996964 tgttggcttctaaaccctgttttctacacacttttttcacataatacaaagtttatatttatagtgaaagc 14996894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 2393441 - 2393604
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  |||||||  ||||||||||| |||||||||||||| ||||||| |    
T  2393441 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtta-ttgccaagagaaattctctataaaccttagtttgca 2393539  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||| |   | |||||||||||||||| ||||||||||||||    
T  2393540 tgttggcttctaaaccttgttttctactctgtttttcatctgatacaaggcttatatttatagtg 2393604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 46783166 - 46783010
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||| ||| |||||||||||| ||||||||| |||||||||||| ||||||||  ||||||||||||| |||| | |||||||||||||| ||||||||     
T  46783166 agagtctctatcctaacagtgctttgttcaaggtgaatcaaaacgatctcaaccctagtgtttgttgcaaagata-attctctataaaccatagtttgtt 46783068  T
Q  101 tgttggcttctaaaccat-gttttctacacacatattcatctgatacaaggtttatatt 158  Q
    |||||||||||||||| |  ||||||||  |||| ||||||||||||||||||||||||    
T  46783067 tgttggcttctaaaccctatttttctac-tacattttcatctgatacaaggtttatatt 46783010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9521738 - 9521570
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  |||   | ||| |||||||| ||||||||||||||||||||||||    
T  9521738 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagaaat-gttaccaagagaaattctctataaaccctagtttgta 9521640  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||| ||||||||| || |||||||||||| | | |||||||||||||||  | |||||||||||||||    
T  9521639 tgttggtttctaaaccttgtttttctacacacttttatcatctgatacaagg-ctgtatttatagtgaaag 9521570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2232620 - 2232472
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||  | |||||||||||||| |||||||||||||||||||||||     
T  2232620 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctaaag-ttgttgccaagagagattctctataaaccctagtttgtt 2232522  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  2232521 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 2232472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 21818745 - 21818630
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||| |||||||| | |  |||| ||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||    
T  21818745 tgataagtgccaaaaagtagtttattcaatgtttatttacgtcacatttgttacttgtttcacaagttatttagggaaaagccgagagaaaagtgataat 21818646  T
Q  271 tgacctattacgcttt 286  Q
    || |||||||||||||    
T  21818645 tgccctattacgcttt 21818630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 39807307 - 39807179
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||| |||| |||||| ||||| ||||||| | |||||||||||||| ||| |||||||||  ||||||||| ||||||||||||||||     
T  39807307 ctgataagtgtcaggaagtggtattttaaatgtttatttatgacacgtttgttacttgttttacaagttatctagggaaaag-cgagagaaaagtgattt 39807209  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    |||||||||||||||||| |||||| ||||    
T  39807208 ttgacctattacgctttagtcatcttactc 39807179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 38671171 - 38671300
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| || ||||| ||||| ||||| ||||||||  |||||||||||||| |||||||||||||  ||||||||||||||| |||||||| |     
T  38671171 ctgataagtgctaggaagtattattttaaatgtttatttactacacgtttgttacttgtttcacaagttatctagggaaaagccgagaaaaaagtgaatt 38671270  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    ||||||||||||| | || |||||| ||||    
T  38671271 ttgacctattacgttgtagtcatcttactc 38671300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 2823673 - 2823796
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| ||| ||||||| ||| ||||| ||||||||| ||| |||||||||| ||| ||||| |||  ||||||||||||||||||||| || | |    
T  2823673 tgataagtgtcaggaagtagtgttttaaatgtttatttacgacacatttgttacttgttttacaagctatctagggaaaagccgagagaaaagggaattt 2823772  T
Q  271 tgacctattacgctttattcatct 294  Q
    ||||||||||||||||| ||||||    
T  2823773 tgacctattacgctttaatcatct 2823796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 28412621 - 28412716
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtga 266  Q
    |||||||| |||| ||||||| ||| ||||| |||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  28412621 tgataagttccaggaagtagtgttttaaatgtttatttacggcatgtttgttacttgtttcacaagttatctagggaaaagccgagagaaaagtga 28412716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 28997281 - 28997163
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  28997281 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 28997182  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  28997181 ttgcccttttacgctttat 28997163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 29002997 - 29002879
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  29002997 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 29002898  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  29002897 ttgcccttttacgctttat 29002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2401380 - 2401468
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaacc 90  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||    
T  2401380 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaacc 2401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 45023808 - 45023684
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| |||||||||    
T  45023808 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatta 45023709  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| |||||||||||| ||||    
T  45023708 ttgcccttttacgctttatttatct 45023684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 44242633 - 44242514
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||  ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||| | ||||||||||||||||| ||||||||    
T  44242633 ctgataagtgttagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttactgagggaaaagccgagagataagtgatt 44242534  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  44242533 attgcccttttacgctttat 44242514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 35086275 - 35086157
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| ||||| |||    
T  35086275 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtggtta 35086176  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| ||||| |||||    
T  35086175 ttgcccttttacgttttat 35086157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 43687906 - 43687781
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||| |||    
T  43687906 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtaatt 43687807  T
Q  269 attgacctattacgctttattcatct 294  Q
    |||| ||| |||||||||||| ||||    
T  43687806 attgcccttttacgctttatttatct 43687781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 1115011 - 1115129
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttca-caagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| |||||| |||| |  |||| |||||||||| |||   ||||||||| ||||||||||||||||| |||||||||    
T  1115011 tgataagtgctagaaagttgtattttaaatgaatattcaaagcacttttgttacttgtttttgcaagttattgagggaaaagccgagagataagtgatta 1115110  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| ||||| |||||    
T  1115111 ttgcccttttacgttttat 1115129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 4600804 - 4600686
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| || ||  ||||| |||||||||| |||  ||||||||| |||||||||||| |||| |||||||||    
T  4600804 tgataagtgctagaaagttgtattttaaatgatatactttaggcacttttgttacttgttttgcaagttattgagggaaaagccgggagataagtgatta 4600705  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| ||| |||||||    
T  4600704 ttgcccttttatgctttat 4600686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 6239931 - 6239813
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  6239931 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 6239832  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  6239831 ttgcccttttacgctttat 6239813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 39052254 - 39052372
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  39052254 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 39052353  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  39052354 ttgcccttttacgctttat 39052372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 39058626 - 39058744
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  39058626 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 39058725  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  39058726 ttgcccttttacgctttat 39058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 42093183 - 42093065
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  42093183 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 42093084  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  42093083 ttgcccttttacgctttat 42093065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 45017068 - 45016950
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  45017068 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 45016969  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  45016968 ttgcccttttacgctttat 45016950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 9870351 - 9870234
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| | ||||| |||||| |||||| |||| |  |||  |||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||    
T  9870351 tgataagtgctaaaaagtggtattttaaatgaatattcaaagcatttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattat 9870252  T
Q  271 tgacctattacgctttat 288  Q
    |  ||| |||||||||||    
T  9870251 tacccttttacgctttat 9870234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 31073659 - 31073542
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| |||||| |||||| |||| |  |||| ||| |||||| |||  ||||||||| ||||||||||||||| | ||||||||||    
T  31073659 tgataagtgctagaaagttgtattttaaatgaatattcaaagcacttttattacttgttttgcaagttattgagggaaaagccgagatataagtgattat 31073560  T
Q  271 tgacctattacgctttat 288  Q
    || ||| ||| |||||||    
T  31073559 tgcccttttaagctttat 31073542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 1175827 - 1175750
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| |||||||||| |||||| |||||||||||| ||| |||||||||||    
T  1175827 ggcacttttgttacttgttttgcaagttattaagggaaaagctgagagataagtgattattgcccttttacgctttat 1175750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 11912158 - 11912235
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||||||||||| ||||| | |||| |||||||||||||||    
T  11912158 ggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgttaattgccctattacgctttat 11912235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 41304517 - 41304594
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||| ||||| |||  ||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||    
T  41304517 ggcacttttgatacttgttttgcaagttattgagggaaaagccgagagataagtgattattgcccttttacgctttat 41304594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 44917716 - 44917599
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||| | ||||| | |||||| |||||| |||| |  |||| ||||||||||  ||  ||||||||| ||||||||| ||||||| ||||||| ||    
T  44917716 tgataagtactagaaatttgtattttaaatgaatattcaaagcacctttgttacttgctttgcaagttattgagggaaaagtcgagagataagtgataat 44917617  T
Q  271 tgacctattacgctttat 288  Q
    || |||||||||||||||    
T  44917616 tgccctattacgctttat 44917599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 23761350 - 23761433
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttattcatct 294  Q
    ||||| |||||||||| |||  ||||||||| |||||||||| |||||| || ||||||||| ||| |||||||||||| ||||    
T  23761350 ggcacttttgttacttgttttgcaagttattgagggaaaagctgagagataaatgattattgcccttttacgctttatttatct 23761433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 26622695 - 26622618
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||| ||||| | |||||||||||  ||| |||||||||||    
T  26622695 ggcacttttgttacttgttttgcaagttattgagggaaaagtcgagatataagtgattatttcccttttacgctttat 26622618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 4144988 - 4145023
Alignment:
Q  130 acatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4144988 acataatcatctgatacaaggtttatatttatagtg 4145023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 168
Target Start/End: Complemental strand, 28279247 - 28279216
Alignment:
Q  137 catctgatacaaggtttatatttatagtgaaa 168  Q
    ||||||||||||||||||||||||||||||||    
T  28279247 catctgatacaaggtttatatttatagtgaaa 28279216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 32798948 - 32798871
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacc-tattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||  ||||||||||||||||| |||||||||||| || | |||||||||||    
T  32798948 ggcacttttgttacttgttttgcaagttata-agggaaaagccgagagataagtgattattgccctttttacgctttat 32798871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 14353026 - 14352970
Alignment:
Q  56 tagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaa 113  Q
    |||||||||||||||||||| | |||||| ||||||||||||   |||||||||||||    
T  14353026 tagtgtttgttgccaagaga-aatctctacaaaccctagttttgttgttggcttctaa 14352970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 26406632 - 26406800
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||     
T  26406632 agagactcaatcctaacaatgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttgccaagaga-attctctataaaccctagtttgtt 26406730  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaagc 170  Q
    |||||| ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  26406731 tgttggtttctaaaccctgttttctacacacattttcatatgatacaaggtttctatttatagtgaaagc 26406800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10627387 - 10627222
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaa-caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||  |||  ||||||||||||| |||||| ||||||||||||| |||||||||    
T  10627387 agagactcaatcctaacagtgttttgttcaaggtgaatcaaaaacaatcctaaccctagtgtttgttgctaagagaaattctctataaacactagtttgt 10627288  T
Q  100 atgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  10627287 atgttggcttctaaaccctgttttctacacacataataatctgatacaaggcttatatttatagtg 10627222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 4693181 - 4693309
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4693181 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttgtttcacaagttattcagggaaaagccgagagaaaagtgattat 4693280  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||| | |||| ||||||||||||| ||||    
T  4693281 tgatcaattatgctttattcatcttactc 4693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 40222786 - 40222618
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| | |  ||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  40222786 agagactcaatcctaataatactttgttcaaggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 40222688  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  40222687 tgttggcttctaaaccttgtttttctacacactttatcatctgatacaaggcttatatttatagtgaaag 40222618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 11962592 - 11962754
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||| ||||||||| |||| ||||||||  |||||||||||||||||||||  ||||||| |||||||||||| ||||||||| |||| |||||||||    
T  11962592 agagacacaatcctaatagtgctttgttcatggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctatgaaccatagtttgta 11962690  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  11962691 tgttggcttctaaaccctgttttctacaca-atattcatatgatacaaggtttatatttatagtg 11962754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16093450 - 16093613
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||| ||||| |||||||||||  ||| ||||  |||||||||||||||||||| ||| ||||||||||||||||||||    
T  16093450 agagactcaatcctaatagtgtttt-ttcaaggtgaatcaaaaagatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgta 16093548  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| ||||||||||||||||| | || ||||||||||| |||||||||||||    
T  16093549 tgttggcttctaaaccctgttttctacacacataattatttgatacaaggtatatatttatagtg 16093613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 31782616 - 31782738
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||| ||| ||||||||||||||||||||    
T  31782616 agagactcaatcctaacagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgta 31782715  T
Q  101 tgttggcttctaaaccatgtttt 123  Q
    |||||||||||||||| ||||||    
T  31782716 tgttggcttctaaaccctgtttt 31782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 22672857 - 22672693
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22672857 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 22672759  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| || |||||||||||    
T  22672758 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttctatttatagtg 22672693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1240451 - 1240288
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||| ||||| |||||| | | ||||||||||||||||||||    
T  1240451 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgcaaagagaaaatatctataaaccctagtttgta 1240353  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagt 164  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||| |||||||||||||    
T  1240352 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagt 1240288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17841408 - 17841572
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||  |||| ||  ||||||||||| ||||||||||||||||||||||||    
T  17841408 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccctagtattgtttgccaagagaaattctctataaaccctagtttgta 17841507  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    || ||| ||||||||| |||||||||| ||| |  ||||| ||||||||| ||||||||||||||    
T  17841508 tgatggtttctaaaccctgttttctacgcactttatcatccgatacaaggcttatatttatagtg 17841572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25838130 - 25837970
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||  |||||| |||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||| |||||| |     
T  25838130 agagactctctcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttaccaagaga-attctctataaaccatagtttctt 25838032  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttata 162  Q
    |||||||||||||||| |||||||||||||| | ||||| |||||||| ||||| |||||||    
T  25838031 tgttggcttctaaaccttgttttctacacacgttttcatatgatacaaagtttaaatttata 25837970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 35385611 - 35385775
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  35385611 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 35385709  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||| | ||||||||  || |||||||||||| |  |||| |||||||||| ||||||||||||||    
T  35385710 tgttagtttctaaactttgtttttctacacactttatcatttgatacaaggcttatatttatagtg 35385775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2298160 - 2298290
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  2298160 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgccaagagagattctctataaaccctagtttgta 2298258  T
Q  101 tgttggcttctaaaccatg-ttttctacacac 131  Q
    |||||| ||||||||| || ||||||||||||    
T  2298259 tgttggtttctaaaccttgtttttctacacac 2298290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25452518 - 25452388
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  25452518 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaacgctagagtt-gttgccaagagaaattctctataaaccctagtttgta 25452420  T
Q  101 tgttggcttctaaaccatg-ttttctacacac 131  Q
    |||||| ||||||||| || ||||||||||||    
T  25452419 tgttggtttctaaaccttgtttttctacacac 25452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1170834 - 1170673
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  1170834 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 1170736  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaaggtttatatttatagt 164  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||  ||||||||||||    
T  1170735 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg-ctatatttatagt 1170673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 42238294 - 42238163
Alignment:
Q  33 gtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaaccatg-ttttctacacac 131  Q
    |||||||||||||||| ||||  ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  42238294 gtgaatcaaaacaatcccaaccctagtgtt-gttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacacac 42238196  T
Q  132 atattcatctgatacaaggtttatatttatagtg 165  Q
     |  |||| |||||||||||||||||||||||||    
T  42238195 tttatcat-tgatacaaggtttatatttatagtg 42238163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25445519 - 25445366
Alignment:
Q  1 agagactcaatccta----acagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtt 96  Q
    |||||||||||||||    | |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| ||||||||||||||||||||    
T  25445519 agagactcaatcctaatagatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctctataaaccctagtt 25445421  T
Q  97 tgtatgttggcttctaaaccatgttt-tctacacacatat-tcatctgatacaag 149  Q
    |||||||||| ||||||||| ||||| ||||||||| | | ||||||||||||||    
T  25445420 tgtatgttggtttctaaaccttgtttatctacacacttttatcatctgatacaag 25445366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 2153054 - 2153182
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| ||| ||||||| ||| ||||| ||||||||| |||||||||||||| ||| |||||||||  ||||||||||||||||||||| || | |    
T  2153054 tgataagtgtcaggaagtagtgttttaaatgtttatttacgacacgtttgttacttgttttacaagttatctagggaaaagccgagagaaaagggaattt 2153153  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||| |||||| ||||    
T  2153154 tgacctattacgctttagtcatcttactc 2153182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 286
Target Start/End: Complemental strand, 20900590 - 20900473
Alignment:
Q  169 gctgataagtgccagaaagtagt-atttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgat 267  Q
    |||||||||||||| |||||||| | ||||| || ||||||| || ||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  20900590 gctgataagtgccaaaaagtagttaattcaa-tgtttatttatggtacgtttgttacttgtttcacaagttatgtagggaaaagccgagagaaaagtgat 20900492  T
Q  268 tattgacctattacgcttt 286  Q
     |||| |||||||||||||    
T  20900491 aattgccctattacgcttt 20900473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 9844638 - 9844510
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| | | ||||||| ||| ||| | |||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||  || | |    
T  9844638 tgataagtgtcgggaagtagtgttttaaaggtttatttacggcacgtttgttacttgttttacaagttatctagggaaaagccgagagaaaatggaattt 9844539  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||| |||||| ||||    
T  9844538 tgacctattacgctttagtcatcttactc 9844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 4974842 - 4974724
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  4974842 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 4974743  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4974742 ttgcccttttacgctttat 4974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 2823526 - 2823404
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| |||||||||| |||  ||||||| ||  ||||||||||||||| ||||||||||    
T  2823526 tgataagtgccagaaagtagtaattcaaatgaatatttaaggcacttttgttacttgttttgcaagtta-tctaggaaaagccgagagataagtgattat 2823428  T
Q  271 tgacctattacgctttattcatct 294  Q
     | ||| ||||| ||||| |||||    
T  2823427 ggcccttttacgttttatccatct 2823404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 40957562 - 40957680
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||| ||||| |||||||||    
T  40957562 tgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccaagagataagtgatta 40957661  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  40957662 ttgcccttttacgctttat 40957680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 2440151 - 2440034
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| |||||| |||||| |||| |  |||| |||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||    
T  2440151 tgataagtgctagaaagttgtattttaaatgaatattcaaagcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattat 2440052  T
Q  271 tgacctattacgctttat 288  Q
    || ||| ||||| |||||    
T  2440051 tgtccttttacgttttat 2440034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 25562458 - 25562592
Alignment:
Q  9 aatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggct 108  Q
    |||||||| |||||||||||||| ||||||||||||||||||||   || | |||||| |||| ||| ||| |||||||| |||| |||||||||||| |    
T  25562458 aatcctaagagtgttttgttcaaggtgaatcaaaacaatctcaatcctaatatttgttcccaaaagaaatt-tctataaatcctaatttgtatgttggtt 25562556  T
Q  109 tctaaaccatgttttctacacacatattcatctgata 145  Q
    ||| |||| | |||||||||||| | |||||||||||    
T  25562557 tct-aaccttattttctacacacgttttcatctgata 25562592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 25893530 - 25893649
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  25893530 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatt 25893629  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  25893630 attgcccttttacgctttat 25893649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 29981750 - 29981631
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  29981750 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 29981651  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  29981650 attgcccttttacgctttat 29981631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 2959147 - 2959029
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  2959147 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 2959048  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  2959047 ttgcccttttacgctttat 2959029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 2967616 - 2967498
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  2967616 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 2967517  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  2967516 ttgcccttttacgctttat 2967498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 29975246 - 29975128
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  29975246 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 29975147  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  29975146 ttgcccttttacgctttat 29975128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 30021396 - 30021514
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  30021396 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 30021495  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  30021496 ttgcccttttacgctttat 30021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 34356201 - 34356319
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || | || |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  34356201 tgataagtgctagaaagttgtattttaagtaatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 34356300  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  34356301 ttgcccttttacgctttat 34356319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 34357992 - 34358110
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || | || |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  34357992 tgataagtgctagaaagttgtattttaagtaatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 34358091  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  34358092 ttgcccttttacgctttat 34358110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 5877452 - 5877375
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||    
T  5877452 ggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattattgcccttttacgctttat 5877375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 22315062 - 22314979
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttattcatct 294  Q
    ||||| |||||||||| |||  ||||||||| ||||||||||||||||| || ||||||||| ||| |||||||||||| ||||    
T  22315062 ggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataaatgattattgcccttttacgctttatttatct 22314979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28786427 - 28786308
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||  ||||  ||||| |||||| |||||||  |||| ||| |||||| |||||||    
T  28786427 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaattccaaccctagtg-ttgttg-caagagaagttctttat-aacccttgtttgta 28786331  T
Q  101 tgttggcttctaaaccatgtttt 123  Q
    ||||| |||||||| | ||||||    
T  28786330 tgttgccttctaaatcctgtttt 28786308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 30579131 - 30579248
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtg-atta 269  Q
    |||||||||| ||||||||||  ||||| ||  ||||||  |||| ||||| | || |||||||||||||| ||||||||||||||||||||||| || |    
T  30579131 tgataagtgctagaaagtagtgattcaa-tgtatatttaaagcacttttgtaatttgtttcacaagttatttagggaaaagccgagagaaaagtgaataa 30579229  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||||||||| |||||    
T  30579230 ttgccctattacgttttat 30579248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 42152053 - 42151976
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  42152053 ggcacttttgttacttgttttgcaagttattaagggaaaagccgagagataagtgattatttcccttttacgctttat 42151976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15445430 - 15445485
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtga---atcaaaacaatctcaac 53  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  15445430 agagactcaatcctaacagtgttttgttcaaggtgaaatatcaaaacaatctcaac 15445485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 29413655 - 29413732
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| | ||||||| ||||||| |||||||||||| ||| |||||||||||    
T  29413655 ggcacttttgttacttgttttgcaagttattgaaggaaaagtcgagagataagtgattattgcccttttacgctttat 29413732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 4897844 - 4897796
Alignment:
Q  5 actcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaac 53  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  4897844 actcaatcctaacagtgatttgttcaaggtgaatgaaaacaatctcaac 4897796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13295858 - 13295742
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||  |||| | ||     || ||||| |||||||||||||||| ||| ||||| || ||||||||||||       
T  13295858 agagactcaatcctaaaagtgttttgttcatggtgattgaa-----tcccaactctagtgtttgttgccaaaaga-attctatacaaaccctagttttgt 13295765  T
Q  101 tgttggcttctaaaccatgtttt 123  Q
    ||||||||| ||| |||||||||    
T  13295764 tgttggcttttaatccatgtttt 13295742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 29748415 - 29748359
Alignment:
Q  59 tgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||||||||| |||||||| ||||||||||||   ||||||||||||||||    
T  29748415 tgtttgttgccaagaga-attctctacaaaccctagttttcttgttggcttctaaacc 29748359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 20718460 - 20718417
Alignment:
Q  121 tttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  20718460 tttctacaca-atattcatctgatgcaaggtttatatttatagtg 20718417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 34034585 - 34034617
Alignment:
Q  135 ttcatctgatacaaggtttatatttatagtgaa 167  Q
    |||||||||||||||||||||||||||||||||    
T  34034585 ttcatctgatacaaggtttatatttatagtgaa 34034617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Original strand, 12504760 - 12504814
Alignment:
Q  234 aagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    |||||||| ||||||||||||||||| |||| || |||| | |||||||||||||    
T  12504760 aagttattgagggaaaagccgagagataagtaataattgtcatattacgctttat 12504814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 4754237 - 4754166
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||  ||||||||||||||||||| ||  ||||| |||||||||| | | ||||||||| ||||||    
T  4754237 caatctcaaccctagtgtttgttgccaagag-caaactctacaaaccctagtgtttgtgttggcttttaaacc 4754166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 13735084 - 13735214
Alignment:
Q  169 gctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13735084 gctgacaagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttgtttcacaagttattcagggaaaagccgagagaaaagtgatt 13735183  T
Q  269 attgacctattacgctttattcatctcactc 299  Q
    |||||||||||||||||||||||||| ||||    
T  13735184 attgacctattacgctttattcatcttactc 13735214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22352011 - 22352175
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||| ||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22352011 agagactcaatcctaatagtgctttgttcaaggtgattcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 22352109  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||||||||||||||||||    
T  22352110 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaaggtttatatttatagtg 22352175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17695010 - 17695174
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  |||| ||||||||||||||| ||||||||||||||||||||||||    
T  17695010 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagt-tttgttgccaagagaaattctctataaaccctagtttgta 17695108  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  17695109 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 17695174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 25466058 - 25466222
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| | || ||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25466058 agagactcaatcctaataatgctttgttcaaggtgaatcaaaacaatctcaaccttagtgtt-gttgccaagagaaattctctataaaccctagtttgta 25466156  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  25466157 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 25466222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 13556352 - 13556224
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  13556352 tgataagtgccataaagtagtatttcaaatgattattttcggcacatttgttacttgtttcacatgttattcagggaaaagtcgagagaaaagtgattat 13556253  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    |||| ||||||||||||||||||| ||||    
T  13556252 tgacttattacgctttattcatcttactc 13556224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19702021 - 19702150
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||| ||||||||||    
T  19702021 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacgctagtttgta 19702120  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    |||||||||||||||| |||||||||||||    
T  19702121 tgttggcttctaaaccttgttttctacaca 19702150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 181 - 292
Target Start/End: Complemental strand, 1052453 - 1052342
Alignment:
Q  181 cagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctatta 280  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  1052453 cagaaagtagtatttaaaataattatttacggcacgtttgttacttgtttctcaagttattcagagaaaagccgagagaaaagtgattattgacctatta 1052354  T
Q  281 cgctttattcat 292  Q
    ||||||||||||    
T  1052353 cgctttattcat 1052342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 22342960 - 22343122
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||| ||||||||| |||| |||||||||  ||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  22342960 agagacgcaatcctaatagtgctttgttcaagttgaatcaaaacaatctcaaccctagtgtt-gttgccaagagagattctctataaaccctagtttgta 22343058  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatag 163  Q
    |||||||||||||||| || |||||||||||| |  |||| |||||||||| ||||||||||||    
T  22343059 tgttggcttctaaaccctgtttttctacacactttatcatatgatacaaggcttatatttatag 22343122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 13467622 - 13467786
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| ||||| |||| | ||||||||||||||||||||||||    
T  13467622 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgcaaagataaattctctataaaccctagtttgta 13467720  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||||||||| |  |||| |||||||||| ||||||||||||||    
T  13467721 tgttggcttctaaaccctgtttttctacacactttatcatttgatacaaggcttatatttatagtg 13467786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33215850 - 33215682
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||| ||||| |||||||||||||||| ||||  ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  33215850 agagactcaatcctaatagtgctttattcaaggtgaatcaaaacaatcacaaccctagtgtt-gttgcaaagagaaattctctataaaccctagtttgta 33215752  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||||||||||||  || |||||||||||| |  |||||||| |||||| ||||||||||||||||||    
T  33215751 tgttggcttctaaactctgtttttctacacactttatcatctgacacaaggcttatatttatagtgaaag 33215682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 5165974 - 5166137
Alignment:
Q  1 agagactcaatcctaa-cagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| || ||||  |||| ||  |||||  |||| |||||||||||||||||| ||||    
T  5165974 agagactcaatcctaaacagtgttttgttcaaagtgaatcaaaaca-tcccaaccctagtattc-ttgccttgagaaattctctataaaccctagcttgt 5166071  T
Q  100 atgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  5166072 atgttggcttctaaaccctgttttctacacacataatcatctgatacaagacttatatttatagtg 5166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 10080552 - 10080681
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||| |     
T  10080552 ctgataagtgccaggaagtagtattttaaatgcttatttacggcacgtttgttacttgtttcacaagttatctagggaaaagctgagagaaaagtgaatt 10080651  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    |||||||||||||||||| |||||| ||||    
T  10080652 ttgacctattacgctttagtcatcttactc 10080681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3577673 - 3577821
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  3577673 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcaaagagaaattctctataaaccctagtttgta 3577771  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaag 149  Q
    |||||| || |||||| || |||||||||||| |  ||||||||||||||    
T  3577772 tgttggtttttaaaccctgtttttctacacactttatcatctgatacaag 3577821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25941667 - 25941504
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| | || ||||||||| |||||||||||||||| ||||  ||| | ||||| |||||||| ||||||||| |||||||||||| |    
T  25941667 agagactcaatcctaataatgctttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttaccaagagaaattctctat-aaccctagtttgaa 25941570  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| |||||||||||| |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  25941569 tgttggtttctaaaccatgtttttctacacactttatcatctgatacaaggcttatatttatagtg 25941504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26643199 - 26643036
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||| | |||||||||||||||| ||||  ||||||| || | ||||||| ||||||||||||||||||||||||    
T  26643199 agagactcaatcctaatagtgatttgttcgaggtgaatcaaaacaatcccaaccctagtgtt-gtgggcaagagaaattctctataaaccctagtttgta 26643101  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||  |   |  ||||||||||||||  ||||||||||||||    
T  26643100 tgttggcttctaaaccttgttttctattctgtttctcatctgatacaagacttatatttatagtg 26643036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 26749165 - 26749002
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||| | |||||||||||||||| ||||  ||||||| || | ||||||| ||||||||||||||||||||||||    
T  26749165 agagactcaatcctaatagtgatttgttcgaggtgaatcaaaacaatcccaaccctagtgtt-gtgggcaagagaaattctctataaaccctagtttgta 26749067  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||  |   |  ||||||||||||||  ||||||||||||||    
T  26749066 tgttggcttctaaaccttgttttctattctgtttctcatctgatacaagacttatatttatagtg 26749002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13878750 - 13878602
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  13878750 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 13878652  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  13878651 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 13878602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13883498 - 13883350
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  13883498 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 13883400  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  13883399 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 13883350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 31248873 - 31249021
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  31248873 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 31248971  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  31248972 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 31249021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35201485 - 35201633
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  35201485 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 35201583  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  35201584 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 35201633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17036078 - 17035974
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  17036078 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 17035980  T
Q  101 tgttgg 106  Q
    ||||||    
T  17035979 tgttgg 17035974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 16785942 - 16785814
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  16785942 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 16785844  T
Q  101 tgttggcttctaaaccatg-ttttctacacac 131  Q
    ||||||  |||||||| || ||||||||||||    
T  16785843 tgttgg--tctaaaccttgtttttctacacac 16785814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26887383 - 26887531
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  26887383 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 26887481  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||| | | | |||||||||||||||    
T  26887482 tgttgg--tctaaaccttgtttttctacacgcttttatcatctgatacaagg 26887531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12166305 - 12166397
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaacccta 93  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||    
T  12166305 agagactcaatcctaatggtgctttgttcaacgtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacccta 12166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 24542834 - 24542946
Alignment:
Q  2 gagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtat 101  Q
    ||||||| ||||||| |||||||| ||||| |||||||||||||||| ||||  |||||||||||||||||||| | |||||||||||| |||||||  |    
T  24542834 gagactctatcctaaaagtgttttattcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagaga-aatctctataaaccatagtttg-gt 24542931  T
Q  102 gttggcttctaaacc 116  Q
    |||||||||||||||    
T  24542932 gttggcttctaaacc 24542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 4668277 - 4668397
Alignment:
Q  169 gctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgat 267  Q
    |||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||    
T  4668277 gctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgat 4668376  T
Q  268 tattgacctattacgctttat 288  Q
    ||||| ||| |||||||||||    
T  4668377 tattgcccttttacgctttat 4668397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 4675124 - 4675244
Alignment:
Q  169 gctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgat 267  Q
    |||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||    
T  4675124 gctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgat 4675223  T
Q  268 tattgacctattacgctttat 288  Q
    ||||| ||| |||||||||||    
T  4675224 tattgcccttttacgctttat 4675244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 31549155 - 31549035
Alignment:
Q  169 gctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgat 267  Q
    |||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||    
T  31549155 gctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgat 31549056  T
Q  268 tattgacctattacgctttat 288  Q
    ||||| ||| |||||||||||    
T  31549055 tattgcccttttacgctttat 31549035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 4737262 - 4737380
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  4737262 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 4737361  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4737362 ttgcccttttacgctttat 4737380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 13670771 - 13670889
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| |||| || |||||  ||||| |||||||||| |||  ||||||||| ||| ||||||||||||| |||||||||    
T  13670771 tgataagtgctagaaagttgtattttaaattatatattttaggcacttttgttacttgttttgcaagttattgaggaaaaagccgagagataagtgatta 13670870  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  13670871 ttgcccttttacgctttat 13670889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 1427357 - 1427476
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  1427357 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 1427456  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  1427457 attgcccttttacgctttat 1427476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 7061449 - 7061568
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  7061449 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 7061548  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  7061549 attgcccttttacgctttat 7061568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 11065078 - 11065197
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  11065078 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 11065177  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  11065178 attgcccttttacgctttat 11065197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 4019170 - 4019288
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  4019170 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 4019269  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4019270 ttgcccttttacgctttat 4019288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 4025596 - 4025714
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  4025596 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 4025695  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4025696 ttgcccttttacgctttat 4025714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 4717475 - 4717593
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  4717475 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 4717574  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4717575 ttgcccttttacgctttat 4717593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 9863709 - 9863827
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||| ||||    
T  9863709 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtaatta 9863808  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  9863809 ttgcccttttacgctttat 9863827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 21261519 - 21261637
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  21261519 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 21261618  T
Q  270 ttgacctattacgctttat 288  Q
    ||  ||| |||||||||||    
T  21261619 tttcccttttacgctttat 21261637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 30445633 - 30445560
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaaccat 118  Q
    |||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||  |||||||||||||||||||    
T  30445633 caatctcaaccgtagtgtttgttgccaagaga-attatctacaaaccctagttttaatgttggcttctaaaccat 30445560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 31128235 - 31128353
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  31128235 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 31128334  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  31128335 ttgcccttttacgctttat 31128353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 32327428 - 32327546
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  32327428 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 32327527  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  32327528 ttgcccttttacgctttat 32327546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 34650087 - 34649969
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  34650087 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 34649988  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  34649987 ttgcccttttacgctttat 34649969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 34656538 - 34656420
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  34656538 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 34656439  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  34656438 ttgcccttttacgctttat 34656420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 27671384 - 27671267
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| |||||| |||| | |||| |  |||| ||| |||||| |||  ||||||||| ||| ||||||||||||| ||||||||||    
T  27671384 tgataagtgctagaaagttgtattttaaattaatattcaaagcacttttattacttgttttgcaagttattgaggaaaaagccgagagataagtgattat 27671285  T
Q  271 tgacctattacgctttat 288  Q
    || ||| |||||||||||    
T  27671284 tgcccttttacgctttat 27671267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 7068636 - 7068754
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||   |||||||| ||||||||||||||| | |||||||||    
T  7068636 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgtaagttattaagggaaaagccgagaaataagtgatta 7068735  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  7068736 ttgcccttttacgctttat 7068754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 1166338 - 1166455
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||| ||| ||||||| |||||| |||||| ||||||  |||| ||| |||||| |||  ||||||||| |||||||| |||||||| ||||||||||    
T  1166338 tgataaatgctagaaagttgtattttaaatgaatatttaaagcacttttattacttgttttccaagttatttagggaaaaaccgagagataagtgattat 1166437  T
Q  271 tgacctattacgctttat 288  Q
     | | | |||||||||||    
T  1166438 agtcattttacgctttat 1166455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 34710504 - 34710623
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  | ||| |||||||||| |||  ||||||||| || |||||||||||| | ||||||||    
T  34710504 ctgataagtgctagaaagttgtaatttaagtgatatattttagtcacttttgttacttgttttgcaagttattaagagaaaagccgagaaataagtgatt 34710603  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  34710604 attgcccttttacgctttat 34710623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 4189206 - 4189088
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| || ||||||| |||  ||||||||| |||||||||| |||| | |||||||||    
T  4189206 tgataagtgctagaaagttgtaatttaagtgatatattttaggcactttcgttacttgttttgcaagttattaagggaaaagctgagaaataagtgatta 4189107  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4189106 ttgcccttttacgctttat 4189088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 9847746 - 9847685
Alignment:
Q  228 tttcacaagttattcagggaaaagccgagagaaaagtg-attattgacctattacgctttat 288  Q
    |||||||||||||| ||||||||||||||| ||||||| || |||| |||||||| ||||||    
T  9847746 tttcacaagttatttagggaaaagccgagataaaagtgaataattgccctattacactttat 9847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 22858250 - 22858289
Alignment:
Q  129 cacatattcatctgatacaaggtttatatttatagtgaaa 168  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  22858250 cacaaattcatctgatacaaggtttatatttatagagaaa 22858289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 22858150 - 22858221
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||  ||||||||||| |||||||| | | |||| |||||||||||| | |||| |||||||||||    
T  22858150 caatctcaaccctagtgtttgttaccaagagaaaat-tctacaaaccctagtttttgtgttagcttctaaacc 22858221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 30443403 - 30443344
Alignment:
Q  56 tagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    |||||||||||||||| ||| |||||||| ||| | ||||||  |||||||||||||||||    
T  30443403 tagtgtttgttgccaacaga-attctctacaaatcatagttttgatgttggcttctaaacc 30443344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 8e-61; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16638850 - 16638692
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| ||||  ||||||||||||| |||||| ||||||||||||||||||||||||    
T  16638850 agagactcaatcctaacagtgttttgtttaaggtgaatcaaaacaatcccaaccctagtgtttgttgcaaagagaaattctctataaaccctagtttgta 16638751  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatattt 159  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  16638750 tgttggcttctaaaccctgttttctacacactttttcatctgatacaaggtttatattt 16638692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 666536 - 666664
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  666536 tgataagtgccagaaagtagtatttcaaatgattatttatgacacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 666635  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    |||||||||||||||||||||||| ||||    
T  666636 tgacctattacgctttattcatcttactc 666664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4570117 - 4569950
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||| ||||||| |||||||||||||| |||||||||||||||| ||||  ||||| | |||||||||||| ||||||||||||||||||||||||    
T  4570117 agagactcgatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgat-gttgccaagagaaattctctataaaccctagtttgta 4570019  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||||||||||||  |||||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  4570018 tgttggcttctaaactctgttttctacacactttatcatctgatacaaggcttatatttatagtgaaag 4569950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 13072140 - 13072302
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||| ||| |||| ||||||||| |||||||||||||||| ||||  ||||| | |||||||||||| ||||||||||||||||||||||||    
T  13072140 agagactcaatcataatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagtgat-gttgccaagagaaattctctataaaccctagtttgta 13072238  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  13072239 tgttggcttctaaaccttgttttctacaca-atattcatctgatacaaggtttatatctatagtg 13072302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16489372 - 16489209
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  16489372 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccttagtgtt-gttgccaagagaaattctctataaaccctagtttgta 16489274  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| |||||||||||||| |  ||||||||||||||| ||||||| ||||||    
T  16489273 tgttggtttctaaaccctgttttctacacactttatcatctgatacaaggcttatattcatagtg 16489209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 47566516 - 47566387
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||    
T  47566516 agagactcaatcctaatagtgctttgttcaatgtgaatcaaaacaatctcaaccctagtgtttgttgccaagataaattctctataaaccctagtttgta 47566417  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    |||||||||||||||| |||||||||||||    
T  47566416 tgttggcttctaaaccctgttttctacaca 47566387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 25699772 - 25699609
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  25699772 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 25699674  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||||| |||||| |||||||||||||| |  |||| |||||||||  ||||||||||||||    
T  25699673 tgttggcttttaaaccctgttttctacacactttatcatatgatacaagacttatatttatagtg 25699609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 18586989 - 18586825
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18586989 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 18586891  T
Q  101 tgttggcttctaaaccat-gttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| |  |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  18586890 tgttggtttctaaaccctatttttctacacactttatcatctgatacaaggcttatatttatagtg 18586825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 4556218 - 4556382
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  4556218 agagactcaatcctaatagtgctttgttcaaggtgaatcgaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 4556316  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
     ||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  4556317 agttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 4556382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 15831164 - 15831000
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||| | ||| ||||||||||||||||||||    
T  15831164 agagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagaaaaattttctataaaccctagtttgta 15831066  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  15831065 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 15831000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36771419 - 36771290
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| |||||||  |||||||||||||||    
T  36771419 agagactcaatcataatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgta 36771320  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    |||||||||||||||| | |||||||||||    
T  36771319 tgttggcttctaaaccctattttctacaca 36771290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 13002804 - 13002933
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| |     
T  13002804 ctgataagtgccaggaagtagtattttagatgattatttacggcacgtttgttacttctttcacaagttatctagggaaaagccgagagaaaagtgaatt 13002903  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    |||||||||||||||||  |||||| ||||    
T  13002904 ttgacctattacgcttttgtcatcttactc 13002933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4884897 - 4884736
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| || |   |||||| ||||| |||||| ||||||||||||||||| ||||||    
T  4884897 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccacccccagtgtt-gttgcaaagagaaattctctataaaccctaatttgta 4884799  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttata 162  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||| |||||||||||    
T  4884798 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttata 4884736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 8529290 - 8529126
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||| | |||||||||||| ||||||||||||||||||||||||    
T  8529290 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtggt-gttgccaagagaaattctctataaaccctagtttgta 8529192  T
Q  101 tgttggcttctaaaccat-gttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| |  |||||||||||| |  | ||||||||||| | ||||||||||||||    
T  8529191 tgttggtttctaaaccctatttttctacacactttatgatctgatacaaagcttatatttatagtg 8529126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 15316981 - 15316817
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| || |||||||||||||  |||  ||||||| | |||||||||| ||||||||||||||||||||||||    
T  15316981 agagactcaatcctaatagtgctttgttcaaggtaaatcaaaacaatccgaaccctagtgtt-gctgccaagagaaattctctataaaccctagtttgta 15316883  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |   |||||||||||||| ||||||||||||||    
T  15316882 tgttggtttctaaaccctgtttttctacacactttaccatctgatacaaggcttatatttatagtg 15316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 31300447 - 31300283
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| ||||| |||||| |||||||||||||||||||||| |    
T  31300447 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgcaaagagaaattctctataaaccctagtttgaa 31300349  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  |||| |||||||| | ||||||||||||||    
T  31300348 tgttggtttctaaaccctgtttttctacacactttatcatatgatacaaagcttatatttatagtg 31300283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 36769498 - 36769373
Alignment:
Q  5 actcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgtt 104  Q
    |||| ||||||| |||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||| |||||||  |||||||||||||||||||    
T  36769498 actcgatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgtatgtt 36769399  T
Q  105 ggcttctaaaccatgttttctacaca 130  Q
    |||||||||||| |||||| ||||||    
T  36769398 ggcttctaaaccttgttttttacaca 36769373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4558334 - 4558205
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| || ||||||||  | | || |  |||||||||||||||||||| ||||||||||||||||||||||||    
T  4558334 agagactcaatcctaatagtgctttgttcaaggtaaatcaaaaacaacccagccctagtgtttgttgccaagagaaattctctataaaccctagtttgta 4558235  T
Q  101 tgttggcttctaaaccatgttttctacaca 130  Q
    |||||||||||||||| |||||||||||||    
T  4558234 tgttggcttctaaaccctgttttctacaca 4558205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25614079 - 25614191
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||| ||| |||||    
T  25614079 agagactcaattctaacagtgttttgttcaatgtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccatag-ttgta 25614177  T
Q  101 tgttggcttctaaa 114  Q
    ||||||||||||||    
T  25614178 tgttggcttctaaa 25614191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 15312336 - 15312209
Alignment:
Q  4 gactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgt 103  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  15312336 gactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatgt 15312238  T
Q  104 tggcttctaaaccatg-ttttctacacac 131  Q
    ||| ||||||||| || ||||||||||||    
T  15312237 tggtttctaaaccttgtttttctacacac 15312209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16689099 - 16689263
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||  |||   ||| ||| ||||| |||||| ||| |||||||||||||||||| |    
T  16689099 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaattccaaacctagagtt-gttgcaaagagaaattatctataaaccctagtttgaa 16689197  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  16689198 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 16689263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11853572 - 11853424
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||| | |||||||||||||| ||||||||||||||||||||| |     
T  11853572 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagag-ttgttgccaagagagattctctataaaccctagtttatt 11853474  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  11853473 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 11853424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7050416 - 7050511
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagttt 97  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||| |||||||||||||| |||||||||||||||||||||    
T  7050416 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcacaaccttagtg-ttgttgccaagagaaattctctataaaccctagttt 7050511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 55822288 - 55822160
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| ||||||||||||||||| |||||     
T  55822288 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctaatttgtt 55822190  T
Q  101 tgttggcttctaaaccatg-ttttctacacac 131  Q
    ||||||  |||||||| || ||||||||||||    
T  55822189 tgttgg--tctaaaccttgtttttctacacac 55822160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4874638 - 4874759
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||| ||| ||| ||||||||| |||| |||||||||||||| | ||||| |||||||||||| | ||||| ||||||| |||| ||||||||||     
T  4874638 agagactctatcttaatagtgttttgatcaaggtgaatcaaaacaaacccaactctagtgtttgttgtctagaga-attctctttaaatcctagtttgtt 4874736  T
Q  101 tgttggcttctaaaccatgtttt 123  Q
    |||||||||||||||| ||||||    
T  4874737 tgttggcttctaaaccttgtttt 4874759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 36753701 - 36753819
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| ||||||| |||||| |||||| |||| |  |||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  36753701 ctgataagtgctagaaagttgtattttaaatgaatattcatagcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 36753800  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  36753801 ttgcccttttacgctttat 36753819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 55461719 - 55461844
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| ||||||||    
T  55461719 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatt 55461818  T
Q  269 attgacctattacgctttattcatct 294  Q
    |||| ||| |||||||||||| ||||    
T  55461819 attgcccttttacgctttatttatct 55461844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5336941 - 5337035
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaac--tgtagtgtttgttgccaagagacattctctataaaccctag 94  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||||||    
T  5336941 agagactcaatcctaacagtgttttattcaaggtgagtcaaaacaatctcaaccatatagtgtttgttgccaataga-attctctataaaccctag 5337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 8105154 - 8105030
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| |||||||||    
T  8105154 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatta 8105055  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| |||||||||||| ||||    
T  8105054 ttgcccttttacgctttatttatct 8105030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 13595381 - 13595257
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| |||||||||    
T  13595381 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatta 13595282  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| |||||||||||| ||||    
T  13595281 ttgcccttttacgctttatttatct 13595257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 32274087 - 32274181
Alignment:
Q  27 ttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaaccatgtttt 123  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||| | ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  32274087 ttcaaggtgaatcaaaacaatctcaactctagtgtttgttgccaataga-aatctctataaactctagtttgt-tgttggcttctaaaccttgtttt 32274181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 26557752 - 26557664
Alignment:
Q  10 atcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    ||||||| ||||||||||| || |||||||||||||||| ||||  |||||||||||||||||||| | |||||||||||||||||||||    
T  26557752 atcctaatagtgttttgtttaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagaga-aatctctataaaccctagtttgt 26557664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 17458194 - 17458075
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  17458194 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatt 17458095  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  17458094 attgcccttttacgctttat 17458075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 30239501 - 30239383
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| | || || |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  30239501 tgataagtgctagaaagttgtattttatattatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagagataagtgatta 30239402  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  30239401 ttgcccttttacgctttat 30239383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 37355283 - 37355401
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| ||| |||||||||| ||||||||||||||| | |||||||||    
T  37355283 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttacaagttattgagggaaaagccgagaaataagtgatta 37355382  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  37355383 ttgcccttttacgctttat 37355401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 37367257 - 37367375
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| ||| |||||||||| ||||||||||||||| | |||||||||    
T  37367257 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttacaagttattgagggaaaagccgagaaataagtgatta 37367356  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  37367357 ttgcccttttacgctttat 37367375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 23542524 - 23542604
Alignment:
Q  219 tgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttattcatctcactc 299  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||| || |||| ||||    
T  23542524 tgttacttgtttcacaagttatctagggaaaagccgagagaaaagtgataattgccctattacgctttctttatcttactc 23542604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 272
Target Start/End: Complemental strand, 16406602 - 16406500
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||  |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||    
T  16406602 tgataagtgctagaaagatgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgatta 16406503  T
Q  270 ttg 272  Q
    |||    
T  16406502 ttg 16406500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 27591649 - 27591531
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||| ||||    
T  27591649 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagttatta 27591550  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  27591549 ttgcccttttacgctttat 27591531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 5659392 - 5659509
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| |||||||| || ||||||||| |||| | | ||| |||||||||| |||  ||||||||| ||| ||||||| ||||| ||||||||||    
T  5659392 tgataagtgcgagaaagtaataattcaaatgaatattcaagacacttttgttacttgttttgcaagttattgaggaaaaagcctagagataagtgattat 5659491  T
Q  271 tgacctattacgctttat 288  Q
     | ||| |||||||||||    
T  5659492 agccctcttacgctttat 5659509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16185995 - 16186047
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaac 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  16185995 agagactcaatcctaacagtgttttgttcaaggtgaatcaaaacaatcccaac 16186047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 41374273 - 41374155
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| |||||||||| |||| | |||||||||    
T  41374273 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagctgagaaataagtgatta 41374174  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  41374173 ttgcccttttacgctttat 41374155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 13570642 - 13570558
Alignment:
Q  205 atttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttatt 289  Q
    ||||| ||||| |||||||||| | | |||||||||| ||| ||||||||||| |||  ||||||||| ||||||||||||||||    
T  13570642 atttaaggcacttttgttacttgtcttacaagttatttaggaaaaagccgagaaaaagatgattattgccctattacgctttatt 13570558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 3982342 - 3982434
Alignment:
Q  5 actcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    |||||||||||| |||||||  | ||| |||||| ||||||||||||||  |||||||||||||||||||| | || |||| |||||||||||||    
T  3982342 actcaatcctaatagtgtttc-tccaaggtgaataaaaacaatctcaaccctagtgtttgttgccaagaga-aatcactatgaaccctagtttgt 3982434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 9022428 - 9022369
Alignment:
Q  56 tagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    |||||||||||||||||||| |||||||| ||||||||||||  |||||| ||||||||||    
T  9022428 tagtgtttgttgccaagaga-attctctacaaaccctagttttgatgttgacttctaaacc 9022369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 10113005 - 10112934
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||  ||||||||||||||||||| ||  ||||| |||||||||||| | ||||||||||||||||    
T  10113005 caatctcaaccctagtgtttgttgccaagag-caaactctacaaaccctagtttttgtgttggcttctaaacc 10112934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 30210585 - 30210640
Alignment:
Q  233 caagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  30210585 caagttattgagggaaaagccgagagataagtgattattacccttttacgctttat 30210640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 7781555 - 7781501
Alignment:
Q  217 tttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattatt 271  Q
    |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||    
T  7781555 tttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattatt 7781501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 22295185 - 22295149
Alignment:
Q  135 ttcatctgatacaaggtttatatttatagtgaaagct 171  Q
    |||||||||||||||||||||||||||||| ||||||    
T  22295185 ttcatctgatacaaggtttatatttatagtaaaagct 22295149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 49358610 - 49358692
Alignment:
Q  205 atttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtg-attattgacctattacgcttt 286  Q
    ||||| ||||| ||||||| || | | |||||||||| ||| ||||||| ||||||||||| || |||| |||||||||||||    
T  49358610 atttaaggcacttttgttatttgtcttacaagttatttaggaaaaagccaagagaaaagtgaataattgtcctattacgcttt 49358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 9022339 - 9022306
Alignment:
Q  135 ttcatctgatacaaggtttatatttatagtgaaa 168  Q
    ||||||||||||||||||||||||||||| ||||    
T  9022339 ttcatctgatacaaggtttatatttatagagaaa 9022306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 36769339 - 36769306
Alignment:
Q  132 atattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||||||||||||||| ||||||||||||||    
T  36769339 atattcatctgatacaaggcttatatttatagtg 36769306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 38208880 - 38208951
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||  |||||||||||||||||||| ||| |||| |||| |||| |   |||||||||||||||||    
T  38208880 caatctcaaccctagtgtttgttgccaagaga-attttctacaaacgctagatatgatgttggcttctaaacc 38208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 203256 - 203135
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  203256 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttgtttcacaagttattcagggaaaagccgagagaaaaatgattat 203157  T
Q  271 tgacctattacgctttattcat 292  Q
    ||||||||||||||||||||||    
T  203156 tgacctattacgctttattcat 203135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 43671016 - 43670887
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43671016 ctgataagtgtcagaaagtagtatttcaaattattatttacggcacatttgttacttgtttcacaagttattcagggaaaagccgagagaaaagtgatta 43670917  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||||||||||| ||||    
T  43670916 ttgacctattacgctttattcatcttactc 43670887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 17943560 - 17943397
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||| |||||||||    
T  17943560 agagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccatagtttgta 17943462  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| | |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  17943461 tgttggcttctaaaccctattttctacacaccttatcatctgatacaaggcttatatttatagtg 17943397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 3363501 - 3363378
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  3363501 tgataagtgccagaaagtagtatttcaaatgattatttccagcacatttgttacttgtttcacaagttattcagggaaaagtcgagagaaaagtgattat 3363402  T
Q  271 tgacctattacgctttattcatct 294  Q
     |||||||||||||||||||||||    
T  3363401 cgacctattacgctttattcatct 3363378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22712675 - 22712839
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  22712675 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 22712773  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  22712774 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 22712839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 37170911 - 37171075
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||| ||||||||||| ||||  | ||||| |||||||||||| ||||||||||||||||||||||||    
T  37170911 agagactcaatcctaatagtgctttgttcaaggtgattcaaaacaatcccaaccctggtgtt-gttgccaagagaaattctctataaaccctagtttgta 37171009  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||||||||||||||||||    
T  37171010 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaaggtttatatttatagtg 37171075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 12781380 - 12781543
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| |||||| || |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||||||||||| |    
T  12781380 agagactcaatcctaatagtgctttgtttaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgaa 12781478  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| |||||||||||||| |  ||||||||||||||| ||||||||||||||    
T  12781479 tgttggtttctaaaccctgttttctacacactttatcatctgatacaaggcttatatttatagtg 12781543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38191020 - 38190857
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||| | ||||||||||||||||||    
T  38191020 agagactcaatcttaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattatttataaaccctagtttgta 38190922  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||| |  ||||||||||||||  ||||||||||||||    
T  38190921 tgttggcttctaaaccctgttttctacacactttatcatctgatacaagacttatatttatagtg 38190857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 30479017 - 30478853
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  30479017 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 30478919  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||  || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  30478918 tgttggtttctaaactctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 30478853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20050181 - 20050345
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | ||||||| |||||| ||| ||||||||||||||||||||    
T  20050181 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgcaaagagaaattttctataaaccctagtttgta 20050279  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||| ||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  20050280 tgttggtttctataccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 20050345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20054924 - 20055088
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | ||||||| |||||| |||||||||||||| |||||||||    
T  20054924 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgcaaagagaaattctctataaaccttagtttgta 20055022  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||| ||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  20055023 tgttggtttctataccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 20055088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 27517798 - 27517964
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  27517798 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgcaaagagaaattctctataaaccctagtttgta 27517896  T
Q  101 tgttggcttctaaaccatg-ttttctacacaca--tattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||||  |  |||| |||||||||| ||||||||||||||    
T  27517897 tgttggtttctaaaccctgtttttctacacacactttatcatttgatacaaggcttatatttatagtg 27517964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 35894442 - 35894584
Alignment:
Q  23 tttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaaccatg-tt 121  Q
    ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||| || ||    
T  35894442 tttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgttt 35894540  T
Q  122 ttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||| |  ||||||||||||||| ||||||||||||||    
T  35894541 ttctacacactttatcatctgatacaaggcttatatttatagtg 35894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17932657 - 17932507
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  17932657 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 17932559  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||| || |||||| || |||||||||||| | | |||||||||||||||    
T  17932558 tgttggtttataaaccctgtttttctacacacttttatcatctgatacaagg 17932507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33674564 - 33674713
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||| |||||| ||    
T  33674564 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccatagtttata 33674662  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaag 149  Q
    |||||| ||||||||| || |||||||||||| | | ||||||||||||||    
T  33674663 tgttggtttctaaaccctgtttttctacacacttttatcatctgatacaag 33674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2736228 - 2736080
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  2736228 agagactcaatcctaatagtgttttgttcaatgtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 2736130  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  2736129 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 2736080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2740964 - 2740816
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  2740964 agagactcaatcctaatagtgttttgttcaatgtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 2740866  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  2740865 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 2740816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17462459 - 17462311
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  17462459 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 17462361  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  17462360 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 17462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 39687006 - 39686858
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  39687006 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 39686908  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  39686907 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 39686858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 45567432 - 45567284
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  45567432 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 45567334  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  45567333 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 45567284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22717384 - 22717534
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  || |  ||||||| |||||| ||||||| ||||||||||||||||    
T  22717384 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaacccta-tagttgttgctaagagaaattctctgtaaaccctagtttgta 22717482  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||| ||||||||| || |||||||||||| | | |||||||||||||||    
T  22717483 tgttggtttctaaaccttgtttttctacacacttttatcatctgatacaagg 22717534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 39680068 - 39679920
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||| ||| |||||||||||||||||||||||     
T  39680068 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaaaagagattctctataaaccctagtttgtt 39679970  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  | |||||| || |||||||||||| | | |||||||||||||||    
T  39679969 tgttgg--tttaaaccttgtttttctacacacttttatcatctgatacaagg 39679920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 11908839 - 11908946
Alignment:
Q  162 agtgaaagctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaa 261  Q
    |||| ||| |||||||||  ||||||||||||||||||||  |||||| ||||| |||||||||| |||||||||| ||  |||||||||||||||||||    
T  11908839 agtgtaagttgataagtgtgagaaagtagtatttcaaatgtatatttaaggcacttttgttacttgtttcacaagtaatctagggaaaagccgagagaaa 11908938  T
Q  262 agtgatta 269  Q
    ||||||||    
T  11908939 agtgatta 11908946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 33604015 - 33603844
Alignment:
Q  3 agactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatg 102  Q
    |||||||||  ||| |||||||||||||| |||||||||||||||| ||||  || ||||||||||||| ||| | ||||||||||||||||||||| ||    
T  33604015 agactcaattataatagtgttttgttcaaggtgaatcaaaacaatcccaaccctaatgtttgttgccaaaaga-aatctctataaaccctagtttgt-tg 33603918  T
Q  103 ttggcttctaaaccatg-ttttctacacac------atattcatctgatacaaggtttatatttatagtgaaag 169  Q
    || | |||||||||||| |||||||| | |      || ||||||| |||||||||||||||||||||| ||||    
T  33603917 tttgtttctaaaccatgtttttctactctctacctgattttcatctaatacaaggtttatatttatagtaaaag 33603844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 15853824 - 15853699
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| ||||||||    
T  15853824 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatt 15853725  T
Q  269 attgacctattacgctttattcatct 294  Q
    |||| ||| |||||||||||| ||||    
T  15853724 attgcccttttacgctttatttatct 15853699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 41456921 - 41456792
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||| ||||||| |||  |||| ||||||||| ||||||| |||||| ||| |||||||||  ||||||||||||||||||| | || |     
T  41456921 ctgataagtgtcaggaagtagtgttttcaatgtttatttacgacacgtttattacttgttttacaagttatctagggaaaagccgagagaaaggggaatt 41456822  T
Q  270 ttgacctattacgctttattcatctcactc 299  Q
    |||||||||||||||||| |||||| ||||    
T  41456821 ttgacctattacgctttagtcatcttactc 41456792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30261932 - 30262052
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||| ||| || || |||||||||  | |||||||||||||||||||||  |||||||| ||||||||||| |  ||||||||||| ||||||||     
T  30261932 agagactctatcttagcaatgttttgtttcaggtgaatcaaaacaatctcaaccctagtgtttattgccaagaga-aaactctataaaccgtagtttgt- 30262029  T
Q  101 tgttggcttctaaaccatgtttt 123  Q
    |||||||||||||||||||||||    
T  30262030 tgttggcttctaaaccatgtttt 30262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 42930329 - 42930453
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||  |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| |||||||||    
T  42930329 tgataagtgctagaaagatgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatta 42930428  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| |||||||||||| ||||    
T  42930429 ttgcccttttacgctttatttatct 42930453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 39505290 - 39505409
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  39505290 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatt 39505389  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  39505390 attgcccttttacgctttat 39505409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 29486131 - 29486013
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  29486131 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatta 29486032  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  29486031 ttgcccttttacgctttat 29486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 36781131 - 36781255
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| |||||| |||||||||| |||||||||    
T  36781131 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaagagccgagagataagtgatta 36781230  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| | |||||||||| ||||    
T  36781231 ttgccctttcacgctttatttatct 36781255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 12952086 - 12951967
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  12952086 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 12951987  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  12951986 attgcccttttacgctttat 12951967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 34833746 - 34833865
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  34833746 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 34833845  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  34833846 attgcccttttacgctttat 34833865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 43269136 - 43269017
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  43269136 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 43269037  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  43269036 attgcccttttacgctttat 43269017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 13900908 - 13901026
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  13900908 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 13901007  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  13901008 ttgcccttttacgctttat 13901026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 34840191 - 34840309
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  34840191 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 34840290  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  34840291 ttgcccttttacgctttat 34840309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 45013271 - 45013152
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||  |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  45013271 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcatttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 45013172  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  45013171 attgcccttttacgctttat 45013152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 2158898 - 2158780
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||  |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  2158898 tgataagtgctagaaagttgtaatttaagtgatatattttaggcatttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 2158799  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  2158798 ttgcccttttacgctttat 2158780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 2165314 - 2165196
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||  |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  2165314 tgataagtgctagaaagttgtaatttaagtgatatattttaggcatttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 2165215  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  2165214 ttgcccttttacgctttat 2165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 2020434 - 2020511
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| || |||||||||||||| |||||||||||| ||| |||||||||||    
T  2020434 ggcacttttgttacttgttttgcaagttattgagagaaaagccgagagataagtgattattgcccttttacgctttat 2020511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 16816325 - 16816402
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| || |||||||||||||| |||||||||||| ||| |||||||||||    
T  16816325 ggcacttttgttacttgttttgcaagttattgagagaaaagccgagagataagtgattattgcccttttacgctttat 16816402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 16855482 - 16855559
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| || |||||||||||||| |||||||||||| ||| |||||||||||    
T  16855482 ggcacttttgttacttgttttgcaagttattgagagaaaagccgagagataagtgattattgcccttttacgctttat 16855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20589786 - 20589734
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaac 53  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  20589786 agagactcaatcctaacagtgttttgttcaaggtgaaccaaaacaatcacaac 20589734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 21340928 - 21341004
Alignment:
Q  212 gcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    |||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  21340928 gcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattatttcccttttacgctttat 21341004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28458988 - 28459035
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatc 48  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  28458988 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatc 28459035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45158331 - 45158257
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagaga 75  Q
    |||||||  |||||||||||||||||| |||  ||||||||||||||||||||  || |||||||| ||||||||    
T  45158331 agagactatatcctaacagtgttttgtgcaagatgaatcaaaacaatctcaaccctaatgtttgtttccaagaga 45158257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 30720820 - 30720898
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaaccatgtttt 123  Q
    ||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||   ||||||||| ||| |||||||||    
T  30720820 caatctcaaccctagtgtttggtgccaagaga-attctctacaaaccctagttttagtgttggcttataatccatgtttt 30720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 21066914 - 21066991
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||| | ||||||| |||||||||||  ||| |||||||||||    
T  21066914 ggcacttttgttacttgttttgcaagttattgagggaaatgtcgagagataagtgattatttcccttttacgctttat 21066991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 27248111 - 27248193
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctag-tttgtatgttggcttctaaaccatgttttctac 127  Q
    |||||||| | ||||||||||||||||||||| ||| |||| ||||| ||| ||||| ||||||||||||| || ||||||||||    
T  27248111 caatctcacccgtagtgtttgttgccaagaga-attatctacaaaccttagctttgt-tgttggcttctaatccttgttttctac 27248193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 39287254 - 39287195
Alignment:
Q  56 tagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||||| |||||| |||||||| ||||||||||||   ||||||||||||||||    
T  39287254 tagtgtttgttgctaagaga-attctctacaaaccctagttttcttgttggcttctaaacc 39287195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 43139434 - 43139363
Alignment:
Q  44 caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||  ||||||||||||||||||| ||  ||||| |||||| ||||| | ||||||||||||||||    
T  43139434 caatctcaaccctagtgtttgttgccaagag-caaactctacaaacccaagtttttgtgttggcttctaaacc 43139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 28462589 - 28462621
Alignment:
Q  137 catctgatacaaggtttatatttatagtgaaag 169  Q
    |||||||||||||||||||||||||||| ||||    
T  28462589 catctgatacaaggtttatatttatagtaaaag 28462621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 47883041 - 47883204
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||| ||||||||||||||||||||    
T  47883041 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctagtttgta 47883139  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||| | |||||||||||||| |  ||||||||||||||| ||||||||||||||    
T  47883140 tgttggcttctaaatcctgttttctacacactttatcatctgatacaaggcttatatttatagtg 47883204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 4507696 - 4507568
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4507696 tgataagtaccagaaaatagtatttcaaatgattatttacggcacgtttgttacttgtttcacaagttattcagggaaaagtcgagagaaaagtgattat 4507597  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    |||||| ||| ||||||||||||| ||||    
T  4507596 tgacctgttatgctttattcatcttactc 4507568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 5858567 - 5858405
Alignment:
Q  3 agactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatg 102  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  5858567 agactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatg 5858469  T
Q  103 ttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  5858468 ttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 5858405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 47878330 - 47878494
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  47878330 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 47878428  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  47878429 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 47878494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10949419 - 10949581
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||  ||||||||| ||||||||||||||||  |||  ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  10949419 agagactcaatcctaatagtactttgttcaaggtgaatcaaaacaatcg-aaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 10949516  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| |||||||||||||| |  ||||||||||||||| ||||||||||||||    
T  10949517 tgttggcttctaaaccctgttttctacacactttatcatctgatacaaggcttatatttatagtg 10949581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 11079540 - 11079377
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||| | ||||||||||||||  ||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11079540 agagactcaatcctgatagtgttttgttcaagatgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 11079442  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || | | ||||||| |  ||||||||||||||| ||||||||||||||    
T  11079441 tgttggcttctaaaccctgctatatacacactttatcatctgatacaaggcttatatttatagtg 11079377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 27762145 - 27762307
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| |||||| || |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27762145 agagactcaatcctaatagtgctttgtttaaggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 27762243  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || ||||||||||| |  ||||||||||||||  | ||||||||||||    
T  27762244 tgttggcttctaaaccctg-tttctacacactttatcatctgatacaagactaatatttatagtg 27762307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 54193249 - 54193084
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaa-caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    |||||||||||||||| |||| ||||||||| ||||||||||| ||||| ||||  ||||||| |||||||||||| |||||||||||||||||||||||    
T  54193249 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgt 54193151  T
Q  100 atgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  54193150 atgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 54193084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4535637 - 4535473
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| | ||||  ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  4535637 agagactcaatcctaacggtgttttgttcaaagtgaatcaaaacaaacccaaccctagtgtt-gttgccaagagaaattctctatgaaccctagtttgta 4535539  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||||||||||||| || |||||||||||| |  ||||||||||||||  ||||| ||||||||    
T  4535538 tgttggcttctaaaccctgtttttctacacactttatcatctgatacaagacttataattatagtg 4535473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 13893485 - 13893317
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaa-caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    ||||||||||| ||||| || |||||||||| ||||||||||| ||||| ||||  |||||||||||||||||||| ||||||||||||||||||||| |    
T  13893485 agagactcaattctaacggtattttgttcaaggtgaatcaaaaacaatcccaaccctagtgtttgttgccaagaga-attctctataaaccctagttttt 13893387  T
Q  100 atgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||| |||||||||| |||||||||||||| | ||||| |||||||| || |||||||||||| ||||    
T  13893386 atgttgacttctaaaccttgttttctacacactttttcatttgatacaatgtctatatttatagtaaaag 13893317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38002892 - 38002728
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||| |||||  ||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  38002892 agagactcaaacctaatggtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 38002794  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaagg-tttatatttatagtg 165  Q
    ||||| |||||||| | |||||||||||||     |||| |||||||||| |||||||||||||||    
T  38002793 tgttgacttctaaatcctgttttctacacagtgtatcatttgatacaaggctttatatttatagtg 38002728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 29914112 - 29914262
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||||||||||| |    
T  29914112 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgaa 29914210  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||||||||||||| || |||||||||||| | | |||||||||||||||    
T  29914211 tgttggcttctaaaccctgtttttctacacacttttatcatctgatacaagg 29914262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 22626143 - 22626292
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| ||| |||||||||||| |||||| |||||||||||||||||    
T  22626143 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagagtt-gttgccaagagaaattctccataaaccctagtttgta 22626241  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaagg 150  Q
    |||||| ||||||||| || |||||||||||| |  |||||||||||||||    
T  22626242 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaagg 22626292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 10612941 - 10613101
Alignment:
Q  5 actcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgtt 104  Q
    |||||||| ||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  10612941 actcaatcttaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatgtt 10613039  T
Q  105 ggcttctaaaccat-gttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    || ||||||||| |  |||||||||||| |  |||| |||||||||| ||||||||||||||    
T  10613040 ggtttctaaaccctatttttctacacactttatcatatgatacaaggcttatatttatagtg 10613101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16996898 - 16996737
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||| |  ||||  |||||||| || |||||||| |||||||||||||||||||||||     
T  16996898 agagactcaatcctaacagtgttttattctaggtgaatcaaaacatttccaaccctagtgtttattaccaagaga-attctctataaaccctagtttgtt 16996800  T
Q  101 tgttggcttctaaaccatgt-tttctacacacatattcatctgatacaaggtttatatttata 162  Q
    |||||||||||||||| ||| |||||  |||| | || |||||||||||||||||||||||||    
T  16996799 tgttggcttctaaaccttgtgtttcttaacacttttttatctgatacaaggtttatatttata 16996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10897028 - 10896880
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||| |||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  10897028 agagaatcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 10896930  T
Q  101 tgttggcttctaaaccat-gttttctacacacatattcatctgatacaag 149  Q
    |||||| ||||||||| |  |||||||||||| |  ||||||||||||||    
T  10896929 tgttggtttctaaaccctatttttctacacactttatcatctgatacaag 10896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 3329908 - 3329792
Alignment:
Q  9 aatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggct 108  Q
    |||||||| |||| ||||||||| ||||||||||||| || ||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  3329908 aatcctaatagtgctttgttcaaggtgaatcaaaacattcccaaccctagtgtttattgccaagagaaattctctataaaccctagtttgtatgttggct 3329809  T
Q  109 tctaaaccatgttttct 125  Q
    |||||||| ||||||||    
T  3329808 tctaaaccctgttttct 3329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10595193 - 10595354
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    ||||||| |||||||| |||| ||||||||  ||||||||||||||||  |||  ||||||| |||||||||| | ||||||||||||||||||||||||    
T  10595193 agagacttaatcctaatagtgctttgttcatggtgaatcaaaacaatccaaaccctagtgtt-gttgccaagataaattctctataaaccctagtttgta 10595291  T
Q  101 tgttggcttctaaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| | |||||||||||| || ||||||||||||||  ||||||||||||||    
T  10595292 tgttggtttctaaacctttttttctacacac-ta-tcatctgatacaagacttatatttatagtg 10595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 54188532 - 54188367
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaa-caatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgt 99  Q
    ||||||||||| |||| |||| ||||||||| ||||||||||| ||||| |||   ||||||| |||||||||||| |||||||||||||| ||||||||    
T  54188532 agagactcaattctaatagtgctttgttcaaggtgaatcaaaaacaatcccaaacctagtgtt-gttgccaagagaaattctctataaaccttagtttgt 54188434  T
Q  100 atgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||| ||||||||| || |||||||||||| |  ||| ||||||||||| ||||||||||||||    
T  54188433 atgttggtttctaaaccctgtttttctacacactttatcacctgatacaaggcttatatttatagtg 54188367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6303333 - 6303185
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  6303333 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 6303235  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  6303234 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 6303185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10094233 - 10094381
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  10094233 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10094331  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  10094332 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 10094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10100250 - 10100398
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  10100250 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10100348  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  10100349 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 10100398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10201113 - 10201261
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  10201113 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10201211  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  10201212 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 10201261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 16462226 - 16462076
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  || |  ||||||| |||||| ||||||| ||||||||||||||||    
T  16462226 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaacccta-tagttgttgctaagagaaattctctgtaaaccctagtttgta 16462128  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||| ||||||||| || |||||||||||| | | |||||||||||||||    
T  16462127 tgttggtttctaaaccttgtttttctacacacttttatcatctgatacaagg 16462076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20031477 - 20031636
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||| ||||||||||     
T  20031477 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaagcctagtttgtc 20031575  T
Q  101 tgttggcttctaaaccatgtttt-ctacacacatattcatctgatacaaggtttatatttatagt 164  Q
        |||||||||||| |||||| |||||||| |  ||||||||||||||  |||||||||||||    
T  20031576 ----ggcttctaaaccctgtttttctacacactttatcatctgatacaagacttatatttatagt 20031636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 27544296 - 27544147
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  27544296 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 27544198  T
Q  101 tgttggcttctaaaccatg--ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| ||  |||||||||||| | | |||||||||||||||    
T  27544197 tgttgg--tctaaaccttgttttttctacacacttttatcatctgatacaagg 27544147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10208159 - 10208307
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  10208159 agagactcaatcgtaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10208257  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  10208258 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 10208307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 20649852 - 20649970
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| ||||||||||| ||||| ||| |||| | ||||| |||||||||| ||| |||||||||| |||||||||| |||||| |||||||||    
T  20649852 ctgataagtgctagaaagtagtaattcaagtgaatattcaaggcacttttgttacttgttttacaagttattgagggaaaagctgagagataagtgatta 20649951  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  20649952 ttgcccttttacgctttat 20649970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 4592073 - 4591945
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    ||||||||| | | ||||||| ||| ||| | |||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||  || | |    
T  4592073 tgataagtgtcgggaagtagtgttttaaaggtttatttacggcacgtttgttacttgttttacaagttatctagggaaaagccgagagaaaatggaattt 4591974  T
Q  271 tgacctattacgctttattcatctcactc 299  Q
    ||||||||||||||||| |||||| ||||    
T  4591973 tgacctattacgctttagtcatcttactc 4591945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 48390444 - 48390543
Alignment:
Q  67 gccaagagacattctctataaaccctagtttgtatgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| || |||||||||||| |  ||||||||||| ||| ||||||||||||||    
T  48390444 gccaagagaaattctctataaaccctagtttgtatgtcggcttctaaaccctgtttttctacacactttatcatctgatacgaggcttatatttatagtg 48390543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 7418085 - 7417953
Alignment:
Q  3 agactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatg 102  Q
    |||||||||| |||  ||||||||||||| |||||| |||||||||    || |||||||  ||||||||||| ||||| ||||||||||||||| ||||    
T  7418085 agactcaatcataatggtgttttgttcaaggtgaattaaaacaatc----ct-tagtgtta-ttgccaagagaaattctttataaaccctagtttttatg 7417992  T
Q  103 ttggcttctaaaccatgttttctacacacatattcatct 141  Q
    ||||||||||||||  |||||||||||||||| ||||||    
T  7417991 ttggcttctaaaccccgttttctacacacataatcatct 7417953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 25894500 - 25894376
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||||||   ||||||||| ||||||||||||||||| |||||||||    
T  25894500 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttattatgcaagttattaagggaaaagccgagagataagtgatta 25894401  T
Q  270 ttgacctattacgctttattcatct 294  Q
    ||| ||| |||||||||||| ||||    
T  25894400 ttgcccttttacgctttatttatct 25894376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 24180350 - 24180231
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  24180350 ctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgatt 24180251  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  24180250 attgcccttttacgctttat 24180231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 15823778 - 15823889
Alignment:
Q  10 atcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggctt 109  Q
    |||| |||| |||||||||||| ||||||||||||||||||| |  ||||||||||| | |||||| |  |||||||||||||||||||| |||||||||    
T  15823778 atcccaacaatgttttgttcaaggtgaatcaaaacaatctcagccctagtgtttgtttcaaagaga-aaactctataaaccctagtttgt-tgttggctt 15823875  T
Q  110 ctaaaccatgtttt 123  Q
    | ||||| ||||||    
T  15823876 ccaaaccttgtttt 15823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 47442263 - 47442147
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| ||| || |||||| |||| |  |||| |||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||    
T  47442263 tgataagtgctagaaagttgtaatttaaatgagtattcaaagcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattat 47442164  T
Q  271 tgacctattacgcttta 287  Q
    |  ||| ||||||||||    
T  47442163 tacccttttacgcttta 47442147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 27500901 - 27501020
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | ||||||||    
T  27500901 ctgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatt 27501000  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  27501001 attgcccttttacgctttat 27501020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 9575941 - 9576059
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| || ||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  9575941 tgataagtgctagaaagttgtattttaagtgatatattttaggcactttcgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 9576040  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  9576041 ttgcccttttacgctttat 9576059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 10940134 - 10940240
Alignment:
Q  182 agaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattac 281  Q
    ||||||| |||||| |||||| |||| |   ||| |||||||||| |||  ||||||||| |||||||||||||||||||||||||||||| | | ||||    
T  10940134 agaaagttgtattttaaatgaatattcaaaacacttttgttacttgttttgcaagttattgagggaaaagccgagagaaaagtgattattgcctttttac 10940233  T
Q  282 gctttat 288  Q
    |||||||    
T  10940234 gctttat 10940240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 4310474 - 4310545
Alignment:
Q  217 tttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||    
T  4310474 tttgttacttgttttgcaagttattaagggaaaagccgagagataagtgattattgcccttttacgctttat 4310545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 9569467 - 9569586
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| || |||| |||||  ||||| || ||||||| |||  ||||||||| ||| ||||||||||| | ||||||||    
T  9569467 ctgataagtgctagaaagttgtattttaagtgatatattttaggcactttcgttacttgttttgcaagttattaaggaaaaagccgagaaataagtgatt 9569566  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  9569567 attgcccttttacgctttat 9569586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26763061 - 26762888
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||  ||||||| | |||||||| ||| |||||||||| ||||| ||||  ||||||||||| ||| |||| | |||||||||| ||||||||||     
T  26763061 agagactttatcctaataatgttttgtccaaggtgaatcaaatcaatcacaaccctagtgtttgttcccaggaga-aatctctataaatcctagtttgt- 26762964  T
Q  101 tgttggcttctaaaccatg-ttttctac-----acacatattcatctgatacaaggtttatatttatagtgaaagc 170  Q
    |||| | ||||||||| || ||||||||     ||   | |||||||||||||||||||||||||||||| |||||    
T  26762963 tgttcgtttctaaaccctgtttttctactccctacctcttttcatctgatacaaggtttatatttatagtaaaagc 26762888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 46966817 - 46966968
Alignment:
Q  11 tcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttc 110  Q
    |||||||| ||||||||| ||  |||||| |||||||||||||  |||||||||||||||||||  | |||||||||||| || |||   ||||||||||    
T  46966817 tcctaacattgttttgtttaagatgaatcgaaacaatctcaaccctagtgtttgttgccaagag-gaatctctataaaccttaattttgttgttggcttc 46966915  T
Q  111 taaaccatgttttctacacacatattcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||| |||  |||       | |||||||||||||| ||||||||||||||| ||||    
T  46966916 taaaccctgtactct------gttttcatctgatacaatgtttatatttatagtaaaag 46966968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 6037557 - 6037439
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| |||||||||| |||| | |||||||||    
T  6037557 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagctgagaaataagtgatta 6037458  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  6037457 ttgcccttttacgctttat 6037439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 43932903 - 43932789
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||| ||||||| |||||| |||||| |||| |  |||| ||||||| || |||  ||||||||| ||||||||||||||||| ||||| ||||    
T  43932903 tgataagtgctagaaagttgtattttaaatgaatattcaaagcacttttgttatttgttttgcaagttattgagggaaaagccgagagataagtggttat 43932804  T
Q  271 tgacctattacgctt 285  Q
    || | | ||||||||    
T  43932803 tgcctttttacgctt 43932789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 27703338 - 27703450
Alignment:
Q  10 atcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctcta-taaaccctagtttgtatgttggct 108  Q
    ||||||||| |||||||||||| ||||||||||||||||  ||   ||||||||| |||||||||| | ||||||  |||||||||||| | |||| |||    
T  27703338 atcctaacaatgttttgttcaaggtgaatcaaaacaatccaaatcctagtgtttgatgccaagaga-aatctctacaaaaccctagtttct-tgtttgct 27703435  T
Q  109 tctaaaccatgtttt 123  Q
    |||||||| ||||||    
T  27703436 tctaaaccttgtttt 27703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 43996440 - 43996322
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| ||||||| |||||| ||||||  ||| |  |||| |||||||||| |||  ||| ||||| || |||||| ||||||| || ||||||    
T  43996440 ctgataagtgctagaaagttgtattttaaatgaacattcaaagcacttttgttacttgttttgcaaattattgagagaaaagtcgagagataaatgatta 43996341  T
Q  270 ttgacctattacgctttat 288  Q
    ||||||| ||| |||||||    
T  43996340 ttgaccttttatgctttat 43996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 32747603 - 32747526
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||| ||||| | |||||||||||| ||| |||||||||||    
T  32747603 ggcacttttgttacttgttttgcaagttattgagggaaaagtcgagaaataagtgattattgcccttttacgctttat 32747526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 7768617 - 7768561
Alignment:
Q  59 tgtttgttgccaagagacattctctataaaccctagtttgtatgttggcttctaaacc 116  Q
    ||||||||||||||||| |||||||| ||||| ||||||  |||||||||||||||||    
T  7768617 tgtttgttgccaagaga-attctctacaaaccttagttttgatgttggcttctaaacc 7768561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 23069723 - 23069646
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||| ||||| | |||||||||||  ||| |||||||||||    
T  23069723 ggcacttttgttacttgttttgcaagttattaagggaaaagtcgagaaataagtgattatttcccttttacgctttat 23069646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 3329753 - 3329717
Alignment:
Q  132 atattcatctgatacaaggtttatatttatagtgaaa 168  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3329753 atattcatctgatacaaggcttatatttatagtgaaa 3329717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 7417740 - 7417706
Alignment:
Q  131 catattcatctgatacaaggtttatatttatagtg 165  Q
    |||| ||||||||||||||||||||||||||||||    
T  7417740 cataatcatctgatacaaggtttatatttatagtg 7417706  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 11007974 - 11008008
Alignment:
Q  135 ttcatctgatacaaggtttatatttatagtgaaag 169  Q
    |||||||||||||||||||||||||||||| ||||    
T  11007974 ttcatctgatacaaggtttatatttatagtaaaag 11008008  T

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Target: scaffold0004 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 188401 - 188565
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  188401 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 188499  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  188500 tgttggtttctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 188565  T

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Target: scaffold0209 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17145 - 17309
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| |||||||||  |||| |||||||||| ||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  17145 agagactcaatcctaatagtgctttgttcaagatgaaacaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgta 17243  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatattcatctgatacaaggtttatatttatagtg 165  Q
    |||||| ||||||||| || |||||||||| | |  ||||||||||||||| ||||||||||||||    
T  17244 tgttggtttctaaaccctgtttttctacactctttatcatctgatacaaggcttatatttatagtg 17309  T

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Target: scaffold0256 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 16348 - 16198
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||||||||||||| |    
T  16348 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgaa 16250  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||||||||||||| || |||||||||||| | | |||||||||||||||    
T  16249 tgttggcttctaaaccctgtttttctacacacttttatcatctgatacaagg 16198  T

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Target: scaffold0131 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 31164 - 31016
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  31164 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 31066  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  31065 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 31016  T

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Target: scaffold0006 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 224842 - 224694
Alignment:
Q  1 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaactgtagtgtttgttgccaagagacattctctataaaccctagtttgta 100  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||| | |||||||||||||| |||||||||||||||||||||||     
T  224842 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 224744  T
Q  101 tgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    ||||||  |||||||| || |||||||||||| | | |||||||||||||||    
T  224743 tgttgg--tctaaaccttgtttttctacacacttttatcatctgatacaagg 224694  T

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Target: scaffold0265 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 14064 - 14179
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattat 270  Q
    |||||||||||| |||||||| | |  |||| ||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||    
T  14064 tgataagtgccaaaaagtagtttattcaatgtttatttacgtcacatttgttacttgtttcacaagttatttagggaaaagccgagagaaaagtgataat 14163  T
Q  271 tgacctattacgcttt 286  Q
    || |||||||||||||    
T  14164 tgccctattacgcttt 14179  T

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Target: scaffold0475 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 9133 - 9013
Alignment:
Q  169 gctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgat 267  Q
    |||||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||    
T  9133 gctgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagccgagaaataagtgat 9034  T
Q  268 tattgacctattacgctttat 288  Q
    ||||| ||| |||||||||||    
T  9033 tattgcccttttacgctttat 9013  T

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Target: scaffold0510 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 2300 - 2181
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatt 268  Q
    ||||||||||| ||||||| |||||| ||||||| |||||  ||||| |||||||||| |||  ||||||||| |||||||||| |||| | ||||||||    
T  2300 ctgataagtgctagaaagttgtattttaaatgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagctgagaaataagtgatt 2201  T
Q  269 attgacctattacgctttat 288  Q
    |||| ||| |||||||||||    
T  2200 attgcccttttacgctttat 2181  T

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Target: scaffold0510; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 7878 - 7955
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||| ||||| |||  ||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||||    
T  7878 ggcacttttgatacttgttttgcaagttattgagggaaaagccgagagataagtgattattgcccttttacgctttat 7955  T

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Target: scaffold1764 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 1391 - 1309
Alignment:
Q  70 aagagacattctctataaaccctagtttgtatgttggcttctaaaccatg-ttttctacacacatat-tcatctgatacaagg 150  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| || |||||||||||| | | |||||||||||||||    
T  1391 aagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacacacttttatcatctgatacaagg 1309  T

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Target: scaffold0536 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 11301 - 11419
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| |||||| || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||| ||||| | |||||||||    
T  11301 tgataagtgctagaaagttgtattttaagtgatatattttaggcacttttgttacttgttttgcaagttattgagggaaaagtcgagaaataagtgatta 11400  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  11401 ttgcccttttacgctttat 11419  T

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Target: scaffold0053 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 50977 - 50859
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||| |||||||||| |||  ||||||||| ||||||||||||||| | |||||||||    
T  50977 tgataagtgctagaaagttgtaatttaagtgatatattttaggcacttttgttacttgttttgcaagttattaagggaaaagccgagaaataagtgatta 50878  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  50877 ttgcccttttacgctttat 50859  T

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Target: scaffold0053; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 71672 - 71595
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  71672 ggcacttttgttacttgttttgcaagttattgagggaaaagccgagagataagtgattattacccttttacgctttat 71595  T

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Target: scaffold0343 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 4090 - 3972
Alignment:
Q  170 ctgataagtgccagaaagtagtatttcaaatgattatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    ||||||||||| ||||||| |||||| |||| | |||| |  |||| ||| |||||| |||  ||||||||| ||||||||||||||||| | |||||||    
T  4090 ctgataagtgctagaaagttgtattttaaattaatattcaaagcacttttattacttgttttgcaagttattgagggaaaagccgagagataggtgatta 3991  T
Q  270 ttgacctattacgctttat 288  Q
    ||  ||| |||| ||||||    
T  3990 tttcccttttaccctttat 3972  T

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Target: scaffold0043 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 3940 - 4058
Alignment:
Q  171 tgataagtgccagaaagtagtatttcaaatgat-tatttacggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgatta 269  Q
    |||||||||| ||||||| ||| || || |||| |||||  ||||  |||||||||| |||   |||||||| ||||||||||||||| | |||||||||    
T  3940 tgataagtgctagaaagttgtaatttaagtgatatattttaggcaattttgttacttgttttgaaagttattaagggaaaagccgagaaataagtgatta 4039  T
Q  270 ttgacctattacgctttat 288  Q
    ||| ||| |||||||||||    
T  4040 ttgcccttttacgctttat 4058  T

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Target: scaffold0513 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 288
Target Start/End: Original strand, 11132 - 11209
Alignment:
Q  211 ggcacgtttgttacttatttcacaagttattcagggaaaagccgagagaaaagtgattattgacctattacgctttat 288  Q
    ||||| |||||||||| |||  ||||||||| ||||||||  | ||| | |||||||||||| ||| |||||||||||    
T  11132 ggcacttttgttacttgttttgcaagttattgagggaaaaaacaagaaataagtgattattgcccttttacgctttat 11209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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