View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6646_high_7 (Length: 403)

Name: NF6646_high_7
Description: NF6646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6646_high_7
NF6646_high_7
[»] chr5 (27 HSPs)
chr5 (1-394)||(9603530-9603920)
chr5 (286-391)||(2740273-2740378)
chr5 (287-391)||(33149634-33149738)
chr5 (288-394)||(16327902-16328008)
chr5 (287-397)||(35943882-35943992)
chr5 (285-397)||(18520874-18520986)
chr5 (287-391)||(28177775-28177879)
chr5 (287-391)||(35785199-35785303)
chr5 (285-390)||(13811650-13811755)
chr5 (287-391)||(26720516-26720620)
chr5 (287-391)||(26990265-26990369)
chr5 (310-397)||(39557507-39557594)
chr5 (285-391)||(36732938-36733044)
chr5 (287-387)||(14831814-14831914)
chr5 (283-355)||(15409642-15409714)
chr5 (287-391)||(40145407-40145511)
chr5 (287-391)||(42414298-42414402)
chr5 (286-392)||(2252163-2252269)
chr5 (286-391)||(6679697-6679802)
chr5 (287-396)||(33825315-33825424)
chr5 (285-392)||(3921260-3921367)
chr5 (292-350)||(10356639-10356698)
chr5 (285-392)||(31008986-31009093)
chr5 (284-350)||(39688934-39689000)
chr5 (307-376)||(10227905-10227974)
chr5 (287-397)||(20073506-20073616)
chr5 (341-394)||(25831339-25831392)
[»] chr8 (32 HSPs)
chr8 (285-398)||(42221513-42221626)
chr8 (1-172)||(6451635-6451806)
chr8 (288-397)||(5957831-5957940)
chr8 (287-391)||(1179936-1180040)
chr8 (3-160)||(6457737-6457894)
chr8 (287-391)||(34012292-34012396)
chr8 (286-397)||(37038478-37038589)
chr8 (286-391)||(44507083-44507188)
chr8 (287-391)||(12831047-12831151)
chr8 (287-391)||(15197333-15197437)
chr8 (287-391)||(40423939-40424043)
chr8 (292-355)||(10621119-10621182)
chr8 (284-391)||(14547919-14548026)
chr8 (277-350)||(4854900-4854973)
chr8 (287-391)||(504117-504221)
chr8 (287-391)||(43414577-43414681)
chr8 (285-350)||(24307627-24307692)
chr8 (287-355)||(15048214-15048281)
chr8 (287-391)||(23122593-23122697)
chr8 (284-392)||(24307788-24307896)
chr8 (285-392)||(16056396-16056503)
chr8 (285-392)||(16383375-16383482)
chr8 (287-356)||(20074965-20075034)
chr8 (285-392)||(10284626-10284733)
chr8 (287-394)||(30183868-30183975)
chr8 (285-352)||(34307214-34307281)
chr8 (341-396)||(42354579-42354634)
chr8 (307-397)||(8841422-8841512)
chr8 (286-396)||(17443824-17443934)
chr8 (286-392)||(32032724-32032829)
chr8 (91-143)||(6353049-6353101)
chr8 (331-391)||(9122229-9122289)
[»] chr7 (34 HSPs)
chr7 (286-391)||(36362025-36362130)
chr7 (286-391)||(36361909-36362014)
chr7 (286-391)||(3434561-3434666)
chr7 (287-391)||(19329842-19329946)
chr7 (285-391)||(8080379-8080485)
chr7 (290-391)||(3783998-3784099)
chr7 (284-391)||(7389386-7389493)
chr7 (285-391)||(19436183-19436289)
chr7 (285-391)||(38837215-38837321)
chr7 (285-391)||(40957705-40957811)
chr7 (284-397)||(36208170-36208283)
chr7 (285-398)||(45223040-45223153)
chr7 (287-391)||(35137533-35137637)
chr7 (287-397)||(41423682-41423792)
chr7 (290-391)||(3694370-3694471)
chr7 (287-391)||(38267040-38267144)
chr7 (318-397)||(16374814-16374893)
chr7 (285-392)||(35468850-35468957)
chr7 (292-391)||(35522881-35522980)
chr7 (287-397)||(4999504-4999614)
chr7 (286-392)||(22343360-22343466)
chr7 (286-392)||(41915740-41915846)
chr7 (285-397)||(18207178-18207289)
chr7 (287-356)||(46374833-46374902)
chr7 (285-353)||(10343597-10343665)
chr7 (285-335)||(11044186-11044236)
chr7 (287-397)||(39255914-39256023)
chr7 (287-352)||(32564461-32564526)
chr7 (287-355)||(21234401-21234469)
chr7 (288-391)||(32951489-32951592)
chr7 (285-352)||(38044195-38044262)
chr7 (310-392)||(8238236-8238318)
chr7 (286-356)||(46033832-46033902)
chr7 (287-348)||(40846152-40846213)
[»] chr3 (34 HSPs)
chr3 (285-391)||(49607412-49607518)
chr3 (287-396)||(14623830-14623939)
chr3 (288-396)||(13898046-13898154)
chr3 (285-390)||(27714888-27714993)
chr3 (286-396)||(8956761-8956871)
chr3 (287-391)||(26141528-26141632)
chr3 (287-391)||(53982011-53982115)
chr3 (292-391)||(52629305-52629404)
chr3 (284-391)||(54868891-54868998)
chr3 (290-397)||(25407137-25407245)
chr3 (287-391)||(33644200-33644304)
chr3 (284-355)||(11095385-11095456)
chr3 (288-391)||(31456690-31456793)
chr3 (286-396)||(35536625-35536735)
chr3 (286-391)||(17470404-17470509)
chr3 (284-397)||(33118841-33118954)
chr3 (299-391)||(20764911-20765003)
chr3 (284-356)||(35965805-35965877)
chr3 (291-391)||(48587087-48587187)
chr3 (285-356)||(11347953-11348024)
chr3 (286-397)||(24699944-24700055)
chr3 (287-397)||(8076393-8076503)
chr3 (283-391)||(41189760-41189868)
chr3 (287-397)||(41080709-41080817)
chr3 (286-398)||(21746177-21746284)
chr3 (287-356)||(51419391-51419460)
chr3 (299-391)||(39670023-39670115)
chr3 (285-355)||(36707456-36707526)
chr3 (285-396)||(35093583-35093694)
chr3 (299-397)||(26754707-26754805)
chr3 (287-392)||(45058548-45058652)
chr3 (283-391)||(11907367-11907475)
chr3 (292-396)||(25395324-25395428)
chr3 (287-391)||(47531865-47531969)
[»] chr6 (21 HSPs)
chr6 (287-396)||(31953021-31953130)
chr6 (285-391)||(23128123-23128229)
chr6 (286-391)||(11427615-11427722)
chr6 (285-397)||(12732480-12732592)
chr6 (287-391)||(17598554-17598658)
chr6 (291-396)||(28536479-28536582)
chr6 (292-396)||(9379703-9379807)
chr6 (287-391)||(32869678-32869782)
chr6 (290-391)||(22880654-22880755)
chr6 (288-353)||(946377-946442)
chr6 (286-391)||(31976247-31976352)
chr6 (284-392)||(15990037-15990145)
chr6 (285-392)||(30341355-30341462)
chr6 (287-392)||(15508019-15508124)
chr6 (287-355)||(31109432-31109500)
chr6 (285-355)||(31110793-31110861)
chr6 (285-391)||(6209461-6209567)
chr6 (303-392)||(4231564-4231653)
chr6 (285-369)||(15832575-15832659)
chr6 (287-391)||(29857827-29857931)
chr6 (286-352)||(22422053-22422119)
[»] chr4 (31 HSPs)
chr4 (285-397)||(50052418-50052530)
chr4 (285-391)||(480443-480549)
chr4 (287-391)||(6034044-6034148)
chr4 (284-391)||(48183045-48183152)
chr4 (285-391)||(42044363-42044469)
chr4 (287-397)||(50526161-50526271)
chr4 (287-391)||(11511458-11511562)
chr4 (285-397)||(29239884-29239996)
chr4 (284-396)||(29977882-29977994)
chr4 (287-354)||(40574779-40574846)
chr4 (284-370)||(29547976-29548062)
chr4 (287-392)||(3481654-3481759)
chr4 (284-397)||(23608232-23608345)
chr4 (286-391)||(29234241-29234346)
chr4 (287-391)||(41236347-41236451)
chr4 (287-352)||(8343198-8343263)
chr4 (284-397)||(47104541-47104654)
chr4 (284-352)||(55475188-55475256)
chr4 (285-391)||(24995103-24995209)
chr4 (286-392)||(47986207-47986313)
chr4 (286-392)||(50813887-50813993)
chr4 (287-391)||(54473529-54473633)
chr4 (331-398)||(18769036-18769103)
chr4 (285-392)||(19670711-19670818)
chr4 (287-353)||(31910192-31910258)
chr4 (307-392)||(17983738-17983823)
chr4 (337-397)||(28480258-28480318)
chr4 (337-397)||(28481133-28481193)
chr4 (337-397)||(28482008-28482068)
chr4 (292-391)||(53352562-53352660)
chr4 (331-397)||(18769153-18769219)
[»] chr2 (35 HSPs)
chr2 (284-391)||(9058477-9058584)
chr2 (286-397)||(7465725-7465836)
chr2 (285-398)||(33436089-33436202)
chr2 (287-391)||(13438343-13438447)
chr2 (287-391)||(17473020-17473124)
chr2 (285-397)||(20700813-20700925)
chr2 (290-397)||(28863458-28863565)
chr2 (285-391)||(30915461-30915567)
chr2 (288-397)||(41575138-41575248)
chr2 (286-391)||(5574484-5574589)
chr2 (290-391)||(19930816-19930917)
chr2 (287-391)||(40613898-40614002)
chr2 (287-391)||(40701478-40701582)
chr2 (284-391)||(10249378-10249485)
chr2 (284-398)||(17823781-17823899)
chr2 (287-392)||(27864704-27864809)
chr2 (286-366)||(33436210-33436290)
chr2 (285-392)||(45097730-45097837)
chr2 (287-397)||(17819994-17820104)
chr2 (285-391)||(42257191-42257297)
chr2 (286-355)||(2533123-2533191)
chr2 (286-387)||(32505648-32505749)
chr2 (275-392)||(26891499-26891616)
chr2 (287-392)||(38732354-38732459)
chr2 (287-355)||(28381687-28381755)
chr2 (285-355)||(38273174-38273244)
chr2 (285-355)||(38882846-38882915)
chr2 (307-392)||(2997482-2997567)
chr2 (287-355)||(4060685-4060753)
chr2 (286-356)||(36168835-36168905)
chr2 (336-397)||(3154192-3154253)
chr2 (300-397)||(3439992-3440089)
chr2 (307-392)||(13365373-13365458)
chr2 (287-352)||(43490121-43490186)
chr2 (285-397)||(15428730-15428842)
[»] chr1 (29 HSPs)
chr1 (287-391)||(27564731-27564835)
chr1 (287-391)||(47452316-47452420)
chr1 (287-398)||(3302522-3302633)
chr1 (286-397)||(51898673-51898784)
chr1 (287-391)||(3000319-3000423)
chr1 (287-391)||(9474872-9474976)
chr1 (285-387)||(2581913-2582015)
chr1 (285-391)||(32813245-32813351)
chr1 (285-391)||(38595152-38595258)
chr1 (286-391)||(50630457-50630562)
chr1 (287-391)||(37649198-37649302)
chr1 (287-392)||(41608488-41608593)
chr1 (290-391)||(44548372-44548473)
chr1 (287-391)||(43132-43236)
chr1 (287-391)||(48716278-48716382)
chr1 (285-391)||(8346384-8346490)
chr1 (285-391)||(38632317-38632423)
chr1 (292-398)||(44453984-44454090)
chr1 (286-391)||(37926434-37926539)
chr1 (287-392)||(50590995-50591100)
chr1 (285-392)||(5958995-5959102)
chr1 (286-397)||(7740732-7740843)
chr1 (285-356)||(23597122-23597193)
chr1 (284-355)||(49811559-49811630)
chr1 (294-391)||(26440741-26440838)
chr1 (286-391)||(41758804-41758909)
chr1 (288-397)||(11152368-11152476)
chr1 (318-391)||(13414792-13414865)
chr1 (284-353)||(26274429-26274498)
[»] scaffold1268 (1 HSPs)
scaffold1268 (287-397)||(919-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (287-397)||(919-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (285-391)||(10105-10211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (307-392)||(152518-152603)
[»] scaffold0237 (1 HSPs)
scaffold0237 (287-391)||(4029-4133)
[»] scaffold0110 (1 HSPs)
scaffold0110 (287-392)||(8858-8963)


Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 394
Target Start/End: Original strand, 9603530 - 9603920
Alignment:
Q  1 ttgatagcttcgatgaagtgcgtgacttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9603530 ttgatagcttcgatgaagtgcgtgacttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaat 9603629  T
Q  101 tttccgcactgatggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtacattattaatcttttataaaataaattaacatattttccaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9603630 tttccgcactgatggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtacattattaatcttttgtaaaataaattaacatattttccaa 9603729  T
Q  201 tgccctaacccttagggcaaat-ttagcatttcccataaatataaattataaagtcacaatacctgtgttagcattatattaagtaagagtaatgatata 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    |||||||||||||| |    
T  9603730 tgccctaacccttagggcaaatgttagcatttcccataaatatagattataaagtcacaatatctgtgttagcattatat----taagagtaatgataca 9603825  T
Q  300 tagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 394  Q
    || ||||||||||||| |||||||  |||| ||||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||    
T  9603826 tatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttctctttcat 9603920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 2740273 - 2740378
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  386 ctcttt 391  Q
    ||||||    
T  2740373 ctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 33149738 - 33149634
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  |||| |||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  387 tcttt 391  Q
    |||||    
T  33149638 tcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 16327902 - 16328008
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 387  Q
    |||||||||| ||| | |||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||| | | || |||| |||||||| |    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacacttttt 16328001  T
Q  388 ctttcat 394  Q
    |||||||    
T  16328002 ctttcat 16328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 35943992 - 35943882
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  | | |||||||||| |||| |||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  387 tctttcatctc 397  Q
    |||||| ||||    
T  35943892 tctttcctctc 35943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 18520986 - 18520874
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||| |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  18520986 aagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 18520887  T
Q  385 tctctttcatctc 397  Q
    ||||||| |||||    
T  18520886 tctcttttatctc 18520874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 28177775 - 28177879
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||| |||  |||| |||  |||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  387 tcttt 391  Q
    |||||    
T  28177875 tcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 35785199 - 35785303
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | |||||||||  ||||||||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  387 tcttt 391  Q
    |||||    
T  35785299 tcttt 35785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 13811650 - 13811755
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||||| |||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13811749  T
Q  385 tctctt 390  Q
    ||||||    
T  13811750 tctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 26720516 - 26720620
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||||||||  ||  ||||||||  |||| |||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  387 tcttt 391  Q
    |||||    
T  26720616 tcttt 26720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 26990265 - 26990369
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||||||||  ||  ||||||||  |||| |||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  387 tcttt 391  Q
    |||||    
T  26990365 tcttt 26990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 39557594 - 39557507
Alignment:
Q  310 taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    |||||||||||||| |  || ||| | ||||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctc 39557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 36733044 - 36732938
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||| | |||||| || |||||||| ||||||||||||||||| |  ||| ||||| |||  |||| |||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  385 tctcttt 391  Q
    |||||||    
T  36732944 tctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||  ||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| |||||||||  |||| |||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  387 t 387  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 15409714 - 15409642
Alignment:
Q  283 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||||||| |||||| |||||||||||||||||  ||||||| | |||||||| |||||||||||||||||||    
T  15409714 gtaagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgt 15409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 40145407 - 40145511
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| || || ||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  387 tcttt 391  Q
    |||||    
T  40145507 tcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 42414402 - 42414298
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |  ||||||| |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  387 tcttt 391  Q
    |||||    
T  42414302 tcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 2252269 - 2252163
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||| |||||||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  386 ctctttc 392  Q
    |||||||    
T  2252169 ctctttc 2252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 6679697 - 6679802
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||||||||| |||||||| |||||| |  |||||||| |||||||||||||||||||| |||  |||| |||  |||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  386 ctcttt 391  Q
    ||||||    
T  6679797 ctcttt 6679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 396
Target Start/End: Complemental strand, 33825424 - 33825315
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||  |||||||| ||||||||| ||||||  | |||||||| ||| |||||||||||||||| ||||||| | |  | |||| |||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  387 tctttcatct 396  Q
    ||||| ||||    
T  33825324 tcttttatct 33825315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 3921367 - 3921260
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 3921268  T
Q  385 tctctttc 392  Q
    ||||||||    
T  3921267 tctctttc 3921260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacat-ccattgacacctacacaaaaatctga 350  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 31008986 - 31009093
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| |||||||||||||  ||||||| | |  ||||| |||||||||||||||||||  ||| |||||||||  |||| |||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 31009085  T
Q  385 tctctttc 392  Q
    ||| ||||    
T  31009086 tctatttc 31009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 39689000 - 39688934
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 350  Q
    ||||||| |||||| ||| ||| ||||| |||| ||||||||| |||||||| ||||||||||||||    
T  39689000 taagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 376
Target Start/End: Complemental strand, 10227974 - 10227905
Alignment:
Q  307 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaa 376  Q
    ||||| |||| ||||||||| |||||||| | |||||||||||||| ||||| |||||||| ||| ||||    
T  10227974 ccttatgtggcaatacatcccttgacaccgatacaaaaatctgacatgtgattatgtggattccacacaa 10227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 20073616 - 20073506
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||||||||||||| |||| ||  |||||| || |||||||  ||| ||||||||  ||||||| || ||||| ||   |||| |||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  387 tctttcatctc 397  Q
    | |||| ||||    
T  20073516 tatttcctctc 20073506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 25831339 - 25831392
Alignment:
Q  341 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 394  Q
    |||||||| ||||||| ||||||||| |||| |||| |||| ||||||||||||    
T  25831339 aaaaatctaacacgtggtcatgtggaccccacacaaacacattttctctttcat 25831392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 42221513 - 42221626
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||| |||||||||||||  ||||||| | | |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  385 tctctttcatctca 398  Q
    ||||||||||||||    
T  42221613 tctctttcatctca 42221626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 6451806 - 6451635
Alignment:
Q  1 ttgatagcttcgatgaagtgcgtg-acttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaa 99  Q
    |||||||||||||||||||||||| |||| || |||||||||||| | ||||||||| ||||| | ||| ||||||| ||||| ||||  || |||||||    
T  6451806 ttgatagcttcgatgaagtgcgtggactt-ttcgaaggtggaattaagcttcctacagatatactcagccaaatcagccccttgccagcccttaaggaaa 6451708  T
Q  100 ttttccgcactgatggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtacattattaatctt 172  Q
    |  ||||||| || |||||||||| ||| |||||||||||||| || ||||| |||||||| ||||| |||||    
T  6451707 tcctccgcacagacggtgaacaagcccttaagtttccaccacctcaagtaattagaggtactttattcatctt 6451635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 5957831 - 5957940
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 387  Q
    |||||||||| |||||||| ||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||||||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  388 ctttcatctc 397  Q
    ||||| ||||    
T  5957931 ctttcctctc 5957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||  |||||||||| ||  |||| |||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  387 tcttt 391  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 6457894 - 6457737
Alignment:
Q  3 gatagcttcgatgaagtgcgtg-acttatttgaaggtggaattgaacttcctacacatatattgagcaaaatcagtcccttaccagtactcaaggaaatt 101  Q
    ||||||||||||||||| |||| |||| || |||||||| ||| | ||||||||| ||||| | ||  |||| ||||||||||| |  || ||||||||     
T  6457894 gatagcttcgatgaagtacgtggactt-ttcgaaggtgggattaagcttcctacagatatacttagtcaaattagtcccttaccggcccttaaggaaatc 6457796  T
Q  102 ttccgcactgatggtgaacaagtcctcaagtttccaccaccacatgtaatcagaggtac 160  Q
    || |||||||| |||||||||||||||||||||||||| || |||||||||| ||||||    
T  6457795 tttcgcactgacggtgaacaagtcctcaagtttccacctcctcatgtaatcaaaggtac 6457737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 34012396 - 34012292
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  |||| |||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  387 tcttt 391  Q
    |||||    
T  34012296 tcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 397
Target Start/End: Original strand, 37038478 - 37038589
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  386 ctctttcatctc 397  Q
    || |||| ||||    
T  37038578 ctatttcctctc 37038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 44507188 - 44507083
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| |||||||||||||||||  | || ||||| |||||||||||||||||||  ||| ||||| ||| ||||| || |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  386 ctcttt 391  Q
    ||||||    
T  44507088 ctcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  387 tcttt 391  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 15197333 - 15197437
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||  ||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  387 tcttt 391  Q
    |||||    
T  15197433 tcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 40424043 - 40423939
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||| | |||||||||| |||||| || |||||| | |||||||||||||||||||  ||||||||| |||  |||| |||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  387 tcttt 391  Q
    |||||    
T  40423943 tcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 10621182 - 10621119
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgt 10621119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 14547919 - 14548026
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    ||||||||| |||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  14547919 taagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 14548018  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  14548019 ttctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 4854973 - 4854900
Alignment:
Q  277 tattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 350  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||    
T  4854973 tatttagtaagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 504221 - 504117
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  387 tcttt 391  Q
    |||||    
T  504121 tcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 43414681 - 43414577
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||| ||| || ||| || |||||||| |||||||||||| ||||||| |||  ||||||||  |||| |||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  387 tcttt 391  Q
    |||||    
T  43414581 tcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 350  Q
    |||||| |||||| ||| ||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 15048281 - 15048214
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgt 15048214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 23122697 - 23122593
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||| |||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  | || |||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  387 tcttt 391  Q
    |||||    
T  23122597 tcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 24307896 - 24307788
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    ||||||| |||||| ||| ||| |||||||||| ||||||||| |||||||| |||||||||||||| | |||  ||| |||| |||  ||||  |||||    
T  24307896 taagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacact 24307797  T
Q  384 ttctctttc 392  Q
    |||||||||    
T  24307796 ttctctttc 24307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 16056503 - 16056396
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||||||||| |||  ||||||||| |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16056404  T
Q  385 tctctttc 392  Q
    ||||||||    
T  16056403 tctctttc 16056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 16383375 - 16383482
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16383474  T
Q  385 tctctttc 392  Q
    ||||||||    
T  16383475 tctctttc 16383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 20075034 - 20074965
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    ||||||||||| |||||||||||||||||| ||||||  | |||||||| ||| |||||| |||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtg 20074965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 10284733 - 10284626
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||||||| ||||| |||  ||||||  | |||||||| |||||||||| ||||||||  ||| ||||| |||  |||| |||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactt 10284634  T
Q  385 tctctttc 392  Q
    ||||||||    
T  10284633 tctctttc 10284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 30183975 - 30183868
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||| ||||||||| |||| ||||||| | | |||||  | |||||||||||| |||| ||||| ||||   |||| || |||||||||    
T  30183975 gagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctgatacgtaatcatatggacttcatataagcacactttc 30183876  T
Q  387 tctttcat 394  Q
    ||||||||    
T  30183875 tctttcat 30183868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| ||||||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 42354634 - 42354579
Alignment:
Q  341 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatct 396  Q
    |||||||||||||||| ||||||||||| || | || |||||||||||||||||||    
T  42354634 aaaaatctgacacgtgttcatgtggatctcacataagcacactttctctttcatct 42354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 397
Target Start/End: Complemental strand, 8841512 - 8841422
Alignment:
Q  307 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    |||||||||| | |||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||| ||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctc 8841422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 396
Target Start/End: Original strand, 17443824 - 17443934
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||||||| |||||||||  ||||||    || ||||  |||||||||||||||| ||  ||||||||| |||| ||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  386 ctctttcatct 396  Q
    |||||||||||    
T  17443924 ctctttcatct 17443934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 32032724 - 32032829
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||| ||| |||||||||| ||||||||| |||||| | |||||||||||||||| |||  ||| |||||||   ||||  |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  386 ctctttc 392  Q
    |||||||    
T  32032823 ctctttc 32032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 6353101 - 6353049
Alignment:
Q  91 tcaaggaaattttccgcactgatggtgaacaagtcctcaagtttccaccacca 143  Q
    |||||||| |||||||  |||||||||||||||  || |||||||||||||||    
T  6353101 tcaaggaacttttccgatctgatggtgaacaagcacttaagtttccaccacca 6353049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 9122229 - 9122289
Alignment:
Q  331 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    ||||| |||||||||||||||| ||  ||| |||||||||  |||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 36362025 - 36362130
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  386 ctcttt 391  Q
    ||||||    
T  36362125 ctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 36362014 - 36361909
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  386 ctcttt 391  Q
    ||||||    
T  36361914 ctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 3434561 - 3434666
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||| ||||||||| |||||||||  ||| |||||||||  |||| ||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  386 ctcttt 391  Q
    ||||||    
T  3434661 ctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 19329842 - 19329946
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||||| |||| ||||| |||  |||| |||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  387 tcttt 391  Q
    |||||    
T  19329942 tcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 8080485 - 8080379
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||||||| |||||||||||||||  ||| ||||| |||  |||| |||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  385 tctcttt 391  Q
    |||||||    
T  8080385 tctcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 391
Target Start/End: Original strand, 3783998 - 3784099
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 389  Q
    |||||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  390 tt 391  Q
    ||    
T  3784098 tt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 7389386 - 7389493
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||| ||||||| |||||||||| ||||||  | |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  7389386 taagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 7389485  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  7389486 ttctcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 19436289 - 19436183
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| |||||||||||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| |||||||||  | || |||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  385 tctcttt 391  Q
    |||||||    
T  19436189 tctcttt 19436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 38837215 - 38837321
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |  |||||||||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38837314  T
Q  385 tctcttt 391  Q
    |||||||    
T  38837315 tctcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 40957705 - 40957811
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| |||||||  ||||||||| ||||||  | |||| ||| |||||||||||||||||||  ||| ||||||||| ||||| |||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactt 40957804  T
Q  385 tctcttt 391  Q
    |||||||    
T  40957805 tctcttt 40957811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 36208170 - 36208283
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    ||||||| |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| |||||| ||| ||| ||||| ||   |||| |||| |    
T  36208170 taagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacatt 36208269  T
Q  384 ttctctttcatctc 397  Q
    ||||||||| ||||    
T  36208270 ttctctttcctctc 36208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 398
Target Start/End: Original strand, 45223040 - 45223153
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||||||| |||||||||||||| ||||||| | |  ||| ||||||||||||||||||||| ||||| |  | | ||||||| | || ||    
T  45223040 aagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatattaacctcatacaagcgcattt 45223139  T
Q  385 tctctttcatctca 398  Q
    ||||||||||||||    
T  45223140 tctctttcatctca 45223153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 35137533 - 35137637
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  387 tcttt 391  Q
    |||||    
T  35137633 tcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 41423682 - 41423792
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||||||||| |||| |||||||||| |  ||||||| ||||||||||||||||| ||| ||| || |||||| ||||| || | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  387 tctttcatctc 397  Q
    |||||||||||    
T  41423782 tctttcatctc 41423792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 391
Target Start/End: Original strand, 3694370 - 3694471
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 389  Q
    |||||||||||| ||| |||||||||  |||||| |  || ||||| |||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T
Q  390 tt 391  Q
    ||    
T  3694470 tt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 38267040 - 38267144
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||| |||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  387 tcttt 391  Q
    |||||    
T  38267140 tcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 16374893 - 16374814
Alignment:
Q  318 aatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    ||||||||| |||||| | |||||||||||||||||||| ||| ||||||| || |||| ||||| ||||||||||||||    
T  16374893 aatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctc 16374814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 35468957 - 35468850
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| |||||||||||||| ||| ||||||||  |||||||| ||| |||||||| | | |||| |||||||| ||   |||| |||||||    
T  35468957 aagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactt 35468858  T
Q  385 tctctttc 392  Q
    ||||||||    
T  35468857 tctctttc 35468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 35522881 - 35522980
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| ||||||||||||| |||| |||||| |  || ||||| ||||||||||||||||||||  ||| ||||||||  |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 4999614 - 4999504
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||| ||| |||||| |  |||||||| |||||||||||||| ||||  ||| ||||| |||  |||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  387 tctttcatctc 397  Q
    ||||| |||||    
T  4999514 tcttttatctc 4999504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 22343360 - 22343466
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||| ||| |||| |||  ||||  |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  386 ctctttc 392  Q
    |||||||    
T  22343460 ctctttc 22343466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 41915740 - 41915846
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || ||||||||||||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  386 ctctttc 392  Q
    |||||||    
T  41915840 ctctttc 41915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 18207178 - 18207289
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||||||| |||||||||| |||||| |  |||||||| | |||||||||| |||||||  || ||| | |||| |||| |||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactt 18207276  T
Q  385 tctctttcatctc 397  Q
    |||||||||||||    
T  18207277 tctctttcatctc 18207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 46374902 - 46374833
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    |||| |||||| |||||||||||||||||| || ||| || || ||||| ||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtg 46374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 353  Q
    ||||||||||||| ||||||| |||||||||| ||||||    |||||||| |||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 11044186 - 11044236
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacc 335  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| ||||||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaatacatcctttgacacc 11044236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 39256023 - 39255914
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||||||| |||||||||| |||||| |  |||| ||| | ||||||||||||||||||  || |||||  ||| ||||  ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtg-gcacgtggactccacacaagaacactttc 39255925  T
Q  387 tctttcatctc 397  Q
    |||||||||||    
T  39255924 tctttcatctc 39255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    |||| |||||| ||| |||| ||||||||| |||||| || |||||||| ||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 21234401 - 21234469
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||| |||||| |||||||||||||||||  |||||| || |||||||  |||||||||| ||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgt 21234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 391
Target Start/End: Complemental strand, 32951592 - 32951489
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 387  Q
    |||||||||| |||||||  ||||| ||  ||||||||| || ||| | |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  388 cttt 391  Q
    ||||    
T  32951492 cttt 32951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 38044195 - 38044262
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||| | ||||||||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 8238236 - 8238318
Alignment:
Q  310 taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 392  Q
    ||||||| |||||| || |||||||| |||||||||||||||| ||  |||| |||| |||  ||||  ||||||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttc 8238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 46033902 - 46033832
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    ||||| |||||| ||||| || ||||||||| |||||| || || ||||| ||| ||||||||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 46033832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 40846213 - 40846152
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatct 348  Q
    |||| |||||| ||| |||||||||||||| |||||| || |||||| | ||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatct 40846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 49607412 - 49607518
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||| |||| |||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 49607511  T
Q  385 tctcttt 391  Q
    |||||||    
T  49607512 tctcttt 49607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 396
Target Start/End: Complemental strand, 14623939 - 14623830
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||||||||||||| |||||| || |||||||| ||| |||||||||||| ||| ||||||||| | || |||| |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  387 tctttcatct 396  Q
    ||||||||||    
T  14623839 tctttcatct 14623830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 396
Target Start/End: Complemental strand, 13898154 - 13898046
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 387  Q
    |||||||||| ||| |||||||||||||| |||||| || |||||||| ||| |||||||||||||||| ||||||||| | || |||| ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  388 ctttcatct 396  Q
    |||||||||    
T  13898054 ctttcatct 13898046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 27714993 - 27714888
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| | ||||||||||||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| |||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  385 tctctt 390  Q
    ||||||    
T  27714893 tctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 396
Target Start/End: Original strand, 8956761 - 8956871
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||||||||| |||| ||||||||| |||||||| ||| |||||| ||||||||| ||||||||| |  | |||| |||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  386 ctctttcatct 396  Q
    |||||||||||    
T  8956861 ctctttcatct 8956871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 26141632 - 26141528
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||| |||||||||||||||||||| |||  |||| |||| |||| |||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  387 tcttt 391  Q
    |||||    
T  26141532 tcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 53982011 - 53982115
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  387 tcttt 391  Q
    |||||    
T  53982111 tcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 52629305 - 52629404
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 54868998 - 54868891
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | ||||| |||  |||||||||||    
T  54868998 taagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 54868899  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  54868898 ttctcttt 54868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 397
Target Start/End: Complemental strand, 25407245 - 25407137
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaa-tctgacacgtgatcatgtggatcccatacaatcacactttctc 388  Q
    |||||||| ||| ||| || ||||||| |||| | || |||||||  ||||||||| |||||||||||||||| ||||||||| |||| |||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  389 tttcatctc 397  Q
    |||||||||    
T  25407145 tttcatctc 25407137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 33644200 - 33644304
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||| ||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  387 tcttt 391  Q
    |||||    
T  33644300 tcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 11095456 - 11095385
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||    
T  11095456 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 391
Target Start/End: Original strand, 31456690 - 31456793
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 387  Q
    |||||||||| ||||||| || |||| || |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  388 cttt 391  Q
    ||||    
T  31456790 cttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 396
Target Start/End: Original strand, 35536625 - 35536735
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||||||||| |||| |||||| |  |||||||| ||| |||||| ||||||||| ||||||||| |  | |||| |||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  386 ctctttcatct 396  Q
    |||||||||||    
T  35536725 ctctttcatct 35536735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 17470404 - 17470509
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| | |||||||| |||||| |  || ||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  386 ctcttt 391  Q
    ||||||    
T  17470504 ctcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 33118954 - 33118841
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    ||||||| |||||| ||||||| |||||||||  |||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  | || ||||||    
T  33118954 taagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacact 33118855  T
Q  384 ttctctttcatctc 397  Q
    ||||||||| ||||    
T  33118854 ttctctttcctctc 33118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 20765003 - 20764911
Alignment:
Q  299 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||||||||||||||||||||||  | || ||||| ||||||||||||||||||||  ||  |||| ||| ||||| ||||||||||||||    
T  20765003 atagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 35965877 - 35965805
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    |||||||||||||| ||| ||||||||| ||| |||||||||| |||||||| ||| ||||||||||||||||    
T  35965877 taagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtg 35965805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 391
Target Start/End: Complemental strand, 48587187 - 48587087
Alignment:
Q  291 aatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 390  Q
    ||||||| ||||| | |||||||||| |||||| || |||||||||||| |||||||||||||||  ||| |||||||||  ||||  ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  391 t 391  Q
    |    
T  48587087 t 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 11348024 - 11347953
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    |||||| |||||| |||||||||||||||||  ||||||||| |||||| | ||||||||||||||||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtg 11347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 24700055 - 24699944
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| |||||||||||||| ||| |||||| |  |||||||| ||| ||||||||| ||||||  || ||||| ||  ||||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  386 ctctttcatctc 397  Q
    ||||||| ||||    
T  24699955 ctctttcctctc 24699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 8076393 - 8076503
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||| ||| |||||||||| | |||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  387 tctttcatctc 397  Q
    |||||| ||||    
T  8076493 tctttcctctc 8076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 41189868 - 41189760
Alignment:
Q  283 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacac 382  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||  |||||||| ||| |||||| |||||||||  ||  |||| |||  |||| |||||    
T  41189868 gtaagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacac 41189769  T
Q  383 tttctcttt 391  Q
    |||||||||    
T  41189768 tttctcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 41080709 - 41080817
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||||||||| || | || ||| || |||||||| || ||||||||||| | ||| ||||||||| |||| |||| |||| ||||    
T  41080709 gagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  387 tctttcatctc 397  Q
    |||||||||||    
T  41080807 tctttcatctc 41080817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 21746284 - 21746177
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgaca--cctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||| ||| |||||||||||||| ||||||| | | ||||  || ||||||||||||||||||| |       || ||||||||| ||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgtaa-------gaccccatacaagcacact 21746192  T
Q  384 ttctctttcatctca 398  Q
    |||||||||||||||    
T  21746191 ttctctttcatctca 21746177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 51419460 - 51419391
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    |||| |||||| |||||||||||||| ||  ||||||||| || ||||| ||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtg 51419391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 39670023 - 39670115
Alignment:
Q  299 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    ||||||||||||| |||| |||| |||| |||||| ||| | |||||| ||||||||||||||||||| | | ||||  ||||||| ||||||    
T  39670023 atagacatccttatgtggcaatatatcccttgacatctatataaaaatttgacacgtgatcatgtggacctcgtacacgcacacttcctcttt 39670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 36707526 - 36707456
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||||||||||| ||||| | |||||||||  |||||| || |||||| | |||||||||||||||||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 396
Target Start/End: Original strand, 35093583 - 35093694
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| | |||| ||||||| | |||||||  |||||| |  |||||| | || ||||||||||||| ||| ||||||| |  |||||||| |||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  385 tctctttcatct 396  Q
    |||||| |||||    
T  35093683 tctcttgcatct 35093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 26754707 - 26754805
Alignment:
Q  299 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    ||||||| |||||||||| |||||| || | |||| | |||||||||||||||| ||| |||  |||| |||  |||| |||| |||||||||| ||||    
T  26754707 atagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctc 26754805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 45058652 - 45058548
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| ||| |||||||||||| |||| ||| |||| |||  ||||  | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  387 tctttc 392  Q
    ||||||    
T  45058553 tctttc 45058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 11907367 - 11907475
Alignment:
Q  283 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacac 382  Q
    |||||||| |||||| ||||||| |||||||||  ||||||  | |  ||||  |||||||||||||||| ||| |||| |||| |||  |||| ||||     
T  11907367 gtaagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacat 11907466  T
Q  383 tttctcttt 391  Q
    |||||||||    
T  11907467 tttctcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 25395428 - 25395324
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| ||| ||||||||| ||||  |||||||| || | ||| |||||||||||||||| |||   || | || |||| |||| |||| |||||||||    
T  25395428 atgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctcttt 25395329  T
Q  392 catct 396  Q
    |||||    
T  25395328 catct 25395324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||| ||| |||||| |  || ||| | |||||| |||||||||||||  ||| || | |||  |||| |||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  387 tcttt 391  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 396
Target Start/End: Complemental strand, 31953130 - 31953021
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||||||||||||| |||||| || |||||||| ||| |||||||||||| ||| ||||||||| | || |||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  387 tctttcatct 396  Q
    ||||||||||    
T  31953030 tctttcatct 31953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 23128229 - 23128123
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||| |||||||||||||||| | ||| ||| |||||||||| |||||||| |||||||||||||||||||  ||| |||||||||| |||| |||||||    
T  23128229 aagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 23128130  T
Q  385 tctcttt 391  Q
    |||||||    
T  23128129 tctcttt 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 11427615 - 11427722
Alignment:
Q  286 agagtaatgatatatagacatcct--taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||| ||||||| |||  ||||||| ||||||||| |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  11427715 ttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 12732480 - 12732592
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| |||||||| |||| |||| |||| |  |||||||||| ||||||||||||||||||||   |||||||||||| | || |||| ||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattt 12732579  T
Q  385 tctctttcatctc 397  Q
    |||||||||||||    
T  12732580 tctctttcatctc 12732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 17598554 - 17598658
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  387 tcttt 391  Q
    |||||    
T  17598654 tcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 28536582 - 28536479
Alignment:
Q  291 aatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 390  Q
    ||||||| ||| |||||||||||||| |||||| || |||||||| |||||||||||||||||  | ||||||||| |||| |||| |||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctctt 28536485  T
Q  391 tcatct 396  Q
    | ||||    
T  28536484 ttatct 28536479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 9379807 - 9379703
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| |||||||||||||| ||  ||||||||| |||||||| | |||||||| |||||||||  |||||||||| || |||| |||| |||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T
Q  392 catct 396  Q
    |||||    
T  9379707 catct 9379703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 32869678 - 32869782
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||||| |||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  387 tcttt 391  Q
    |||||    
T  32869778 tcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 391
Target Start/End: Complemental strand, 22880755 - 22880654
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 389  Q
    |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||| ||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  390 tt 391  Q
    ||    
T  22880655 tt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 946377 - 946442
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 353  Q
    ||||| |||| ||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 31976247 - 31976352
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| |||||||||||||||||| |||| | || || ||||| |||||||||||||||||||| |||  || | |||  |||| ||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  386 ctcttt 391  Q
    ||||||    
T  31976347 ctcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 15990145 - 15990037
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    ||||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||    
T  15990145 taagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 15990046  T
Q  384 ttctctttc 392  Q
    |||||||||    
T  15990045 ttctctttc 15990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 30341462 - 30341355
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 30341363  T
Q  385 tctctttc 392  Q
    ||||||||    
T  30341362 tctctttc 30341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 15508124 - 15508019
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  387 tctttc 392  Q
    ||||||    
T  15508024 tctttc 15508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||||||||  ||||||| |||||||||| |||||| || |||||| | |||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 31110861 - 31110793
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||||| |||||| |||||||||||||||||| |||||| || |||||||   ||||||||||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacac--tcacaaaaatctgacacgt 31110793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 6209567 - 6209461
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| ||||||    |||||||  ||||||||||||| |||||  ||| ||||| |||  || | |||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactt 6209468  T
Q  385 tctcttt 391  Q
    |||||||    
T  6209467 tctcttt 6209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 392
Target Start/End: Original strand, 4231564 - 4231653
Alignment:
Q  303 acatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 392  Q
    ||||| |||||||| |||||| || ||| |||| ||||||||||||||||||||  ||| |||| |||  ||||  ||||||||||||||    
T  4231564 acatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttc 4231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 15832575 - 15832659
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcc 369  Q
    ||||||||||||| ||||||| | |||||||  |||| |||  |||||||| |||||||||| ||||||||  ||| ||||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcc 15832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 29857827 - 29857931
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| | |||| ||| |||||| |  || ||||| |||||||||||||||||||  | | |||||||||  | || |||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  387 tcttt 391  Q
    |||||    
T  29857927 tcttt 29857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    |||||||||||| |||||||||||||||||| |||| |||  |||||||  | |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 50052530 - 50052418
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 50052431  T
Q  385 tctctttcatctc 397  Q
    |||||||| ||||    
T  50052430 tctctttcctctc 50052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 480549 - 480443
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 480450  T
Q  385 tctcttt 391  Q
    |||||||    
T  480449 tctcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 6034044 - 6034148
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||| ||  ||| |||||||||  |||| |||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  387 tcttt 391  Q
    |||||    
T  6034144 tcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 48183152 - 48183045
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||| ||||||| ||||| |||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  48183152 taagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48183053  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  48183052 ttctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 42044469 - 42044363
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| |  ||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 42044370  T
Q  385 tctcttt 391  Q
    |||||||    
T  42044369 tctcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 50526271 - 50526161
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||| ||| |||||| ||  |||| ||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  387 tctttcatctc 397  Q
    | |||| ||||    
T  50526171 tatttcctctc 50526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 11511562 - 11511458
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  387 tcttt 391  Q
    |||||    
T  11511462 tcttt 11511458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 29239884 - 29239996
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||| ||||||  ||| ||||| |||| |||| |||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactt 29239983  T
Q  385 tctctttcatctc 397  Q
    |||||||| ||||    
T  29239984 tctctttcctctc 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 29977882 - 29977994
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||| ||| | | || ||||||| |||||| || || ||||| |||||||||||||||||||  |||| |||| |||| |||| ||||||    
T  29977882 taagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacact 29977981  T
Q  384 ttctctttcatct 396  Q
    |||||||||||||    
T  29977982 ttctctttcatct 29977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacg 354  Q
    |||| |||||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 29548062 - 29547976
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatccc 370  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||| |||||||| |||||||||||||||| |||  ||| ||||||||    
T  29548062 taagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatccc 29547976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 3481654 - 3481759
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| | |||||||| ||||||  | |||||||| ||||||||||||||||| |  ||| ||||| |||| |||| |||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  387 tctttc 392  Q
    ||||||    
T  3481754 tctttc 3481759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 23608232 - 23608345
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||||||||||| |||||| ||  |||||| |  |||||||| |||||||||||||||||||  ||| ||| |  ||| |||| ||||||    
T  23608232 taagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacact 23608331  T
Q  384 ttctctttcatctc 397  Q
    |||||||| |||||    
T  23608332 ttctcttttatctc 23608345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 29234346 - 29234241
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| |||||| ||| |||||| || |||| |||| ||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  386 ctcttt 391  Q
    ||||||    
T  29234246 ctcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  387 tcttt 391  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    |||| |||||| ||| |||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 47104541 - 47104654
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    ||||||||||||||||||||||| ||||| ||  ||||||  |  ||||||| |||||||||| ||||||||| |  | | || |||| |||| ||||||    
T  47104541 taagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacact 47104640  T
Q  384 ttctctttcatctc 397  Q
    ||||||||||||||    
T  47104641 ttctctttcatctc 47104654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 55475188 - 55475256
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    ||||||| |||||| ||| |||||||||||||| |||||| || |||||||| ||||||||||||||||    
T  55475188 taagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 24995209 - 24995103
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||||||||||||| |||| |||||| ||| |||||| || |||||||| ||| |||||| ||||||||  ||| ||||| |||  |||| |||| ||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  385 tctcttt 391  Q
    |||||||    
T  24995109 tctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 47986207 - 47986313
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||| ||| |||||||||| ||||||||| |||||| | |||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  386 ctctttc 392  Q
    |||||||    
T  47986307 ctctttc 47986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 50813993 - 50813887
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||| |||  |||||||||||||||| || |||||||| |||||||||||||||| ||| |||| || | |||  ||||  |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  386 ctctttc 392  Q
    |||||||    
T  50813893 ctctttc 50813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 54473633 - 54473529
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  387 tcttt 391  Q
    |||||    
T  54473533 tcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 398
Target Start/End: Complemental strand, 18769103 - 18769036
Alignment:
Q  331 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctca 398  Q
    ||||| |||||||||||||||| ||| ||||||  |||||| |||| |||| ||||||||||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctca 18769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 19670818 - 19670711
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||  |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 19670719  T
Q  385 tctctttc 392  Q
    ||||||||    
T  19670718 tctctttc 19670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 31910192 - 31910258
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 353  Q
    |||| |||||| |||||||||||||||||  ||||||  | |||||||| |||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 17983823 - 17983738
Alignment:
Q  307 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 392  Q
    |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 17983738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 28480318 - 28480258
Alignment:
Q  337 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||||||    
T  28480318 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctc 28480258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 28481193 - 28481133
Alignment:
Q  337 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||||||    
T  28481193 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctc 28481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 28482068 - 28482008
Alignment:
Q  337 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||||||    
T  28482068 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctc 28482008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 53352660 - 53352562
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| ||||||| |||||||||  ||||||| | || |||||||||||||||||||||||||  | | ||||| |||  |||| || |||||||||||    
T  53352660 atgatacatagacacccttaggtgc-aatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 18769153 - 18769219
Alignment:
Q  331 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    ||||| |||||||||||||||||||| ||||||  | |||| ||||  ||| |||||||||||||||    
T  18769153 acacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttcatctc 18769219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 9058477 - 9058584
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||    
T  9058477 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 9058576  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  9058577 ttctcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 7465836 - 7465725
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| |||||| ||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  386 ctctttcatctc 397  Q
    |||||| |||||    
T  7465736 ctcttttatctc 7465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 398
Target Start/End: Complemental strand, 33436202 - 33436089
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactt 33436103  T
Q  385 tctctttcatctca 398  Q
    |||||||| |||||    
T  33436102 tctctttcctctca 33436089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 13438343 - 13438447
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||  ||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  387 tcttt 391  Q
    |||||    
T  13438443 tcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||| ||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| |||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  387 tcttt 391  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 20700813 - 20700925
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||||||||| |||| |||||| || ||||| ||||||||||||||||||||||  ||| ||||| |||  | || |||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 20700912  T
Q  385 tctctttcatctc 397  Q
    |||||||| ||||    
T  20700913 tctctttcctctc 20700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 28863458 - 28863565
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 389  Q
    |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  390 ttcatctc 397  Q
    || |||||    
T  28863558 tttatctc 28863565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 30915461 - 30915567
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| || ||||| || ||| |||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  385 tctcttt 391  Q
    |||||||    
T  30915561 tctcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 41575138 - 41575248
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatccc-atacaatcacactttc 386  Q
    |||||||||| |||||||||||||| |||||||||| || ||||||   |||||||||| ||||| ||| ||||||||| ||| | |||| |||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  387 tctttcatctc 397  Q
    |||||||||||    
T  41575238 tctttcatctc 41575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 5574589 - 5574484
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| |||||||  ||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| |||||||||  |||| ||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  386 ctcttt 391  Q
    ||||||    
T  5574489 ctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 391
Target Start/End: Complemental strand, 19930917 - 19930816
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 389  Q
    |||||||| ||||||| |||||||||| |||||| || |||||| | |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  390 tt 391  Q
    ||    
T  19930817 tt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 40614002 - 40613898
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||  ||  |||| |||  |||| |||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  387 tcttt 391  Q
    |||||    
T  40613902 tcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 40701478 - 40701582
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | ||||| |||  ||||||||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  387 tcttt 391  Q
    |||||    
T  40701578 tcttt 40701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 10249485 - 10249378
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 383  Q
    |||||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  10249485 taagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 10249386  T
Q  384 ttctcttt 391  Q
    ||||||||    
T  10249385 ttctcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 17823781 - 17823899
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtga----tcatgtggatcccatacaatca 379  Q
    |||||||||||||| ||| |||||||||||||| ||||||| | |  ||||| ||||||||||||||||||| |      || |||| ||||||||| ||    
T  17823781 taagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgtaactatatatatggaccccatacaagca 17823880  T
Q  380 cactttctctttcatctca 398  Q
    |||||||||||||||||||    
T  17823881 cactttctctttcatctca 17823899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 27864704 - 27864809
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||| |||| |||||| || |||||| | ||||||||||||||||||| |||| ||||| |||  | || |||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  387 tctttc 392  Q
    ||||||    
T  27864804 tctttc 27864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 33436210 - 33436290
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtgga 366  Q
    |||||||||||| |||||||||||||| ||| |||||| |  |||||||| ||| ||||||||||||||||| ||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtgga 33436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 45097837 - 45097730
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| |||||||||||||| ||||||||| |||||||| | |||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 45097738  T
Q  385 tctctttc 392  Q
    ||||||||    
T  45097737 tctctttc 45097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 17820104 - 17819994
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||||||| |  ||||||| |||||| || |||||||| |||||||||||||||| ||| | | ||||| |||| |||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  387 tctttcatctc 397  Q
    |||||||||||    
T  17820004 tctttcatctc 17819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 42257191 - 42257297
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||||||||| |||||||| ||||||||  |||||||| ||| ||||||||||||||||  ||  |||| |||  |||| |||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactt 42257290  T
Q  385 tctcttt 391  Q
    |||||||    
T  42257291 tctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 2533123 - 2533191
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||| |||||| ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgt 2533191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  386 ct 387  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 392
Target Start/End: Complemental strand, 26891616 - 26891499
Alignment:
Q  275 tatattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatac 374  Q
    ||||| ||| |||||| |||||| |||| || |||||||||| |||||| || | |||||| |||||||||||||||| ||| ||| ||||| | |  ||    
T  26891616 tatataaagaaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaac 26891517  T
Q  375 aatcacactttctctttc 392  Q
    || |||| ||||||||||    
T  26891516 aagcacattttctctttc 26891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 38732354 - 38732459
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||| ||| ||||| |||  ||||||||| |||||||| |||||||||||||||| ||| |||| |||| |||  ||||  ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  387 tctttc 392  Q
    ||||||    
T  38732454 tctttc 38732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 28381755 - 28381687
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||||||||| ||||||| |||||||||| |||||| |  | |||||| |||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgt 28381687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 38273244 - 38273174
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    |||||| |||||| |||||||| ||||| ||| |||||| || || ||||| |||||||||||||||||||    
T  38273244 aagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgt 38273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 38882915 - 38882846
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||||||||||| ||||||| |||||||||| |||| | || |||||| | |||||||||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 2997567 - 2997482
Alignment:
Q  307 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 392  Q
    |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 2997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 4060685 - 4060753
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||||||||| ||||||| |||||||||  |||||| |  |||||| | |||||||||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgt 4060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 36168835 - 36168905
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    ||||| |||||| |||||||||||||| ||  ||||||||| || || || |||||||||| |||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtg 36168905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 3154192 - 3154253
Alignment:
Q  336 tacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    ||||||||||||||||||||| |||  ||||||||   ||| |||| |||||||||||||||    
T  3154192 tacacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctctttcatctc 3154253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 3439992 - 3440089
Alignment:
Q  300 tagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatctc 397  Q
    |||||| |||||||||| ||||||  | | |||||| |||||||||||| ||| ||||| | ||||| |||  |||| |||| |||||||||| ||||    
T  3439992 tagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttcctctc 3440089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 13365373 - 13365458
Alignment:
Q  307 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 392  Q
    |||||| ||| |||| | || |||||||| |||||||||||||||| |||| ||| |||| |||  ||||  ||||||||||||||    
T  13365373 ccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttc 13365458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 43490121 - 43490186
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 352  Q
    |||| |||||| ||| ||| |||||||||  |||||| || |||||||| ||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 15428842 - 15428730
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||||||||| ||||  ||||| || || ||||  |||||||||||||||| |||  |||||  | ||||  ||| |||| ||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattt 15428743  T
Q  385 tctctttcatctc 397  Q
    |||||||||||||    
T  15428742 tctctttcatctc 15428730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 27564835 - 27564731
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||||| |||| ||||| |||  |||| |||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  387 tcttt 391  Q
    |||||    
T  27564735 tcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 47452420 - 47452316
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||||| ||||||  ||| |||||||||  |||| |||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  387 tcttt 391  Q
    |||||    
T  47452320 tcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 3302633 - 3302522
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||| |||||||||||||  |||| || | | |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  387 tctttcatctca 398  Q
    | ||||||||||    
T  3302533 tttttcatctca 3302522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 51898784 - 51898673
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  386 ctctttcatctc 397  Q
    || |||| ||||    
T  51898684 ctatttcctctc 51898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  387 tcttt 391  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 9474976 - 9474872
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  387 tcttt 391  Q
    |||||    
T  9474876 tcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 2581913 - 2582015
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 2582012  T
Q  385 tct 387  Q
    |||    
T  2582013 tct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 32813245 - 32813351
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| |||||||||||||||||| |||||| || || ||||| |||||||||||||||||||| |||  |||| |||  |||| |||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactt 32813344  T
Q  385 tctcttt 391  Q
    |||||||    
T  32813345 tctcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 38595152 - 38595258
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||| ||| | |||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 38595251  T
Q  385 tctcttt 391  Q
    |||||||    
T  38595252 tctcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 50630457 - 50630562
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||| | |||||||||| ||||||||| |||  ||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  386 ctcttt 391  Q
    ||||||    
T  50630557 ctcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 37649198 - 37649302
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||||| |||||||| ||||||  | |||||||| |||||||||||||||||||| ||| ||| || ||  |||| |||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  387 tcttt 391  Q
     ||||    
T  37649298 ccttt 37649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 41608593 - 41608488
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||| |||||||||||||| |||||| || |||||||  |||||||||||||||| |||  ||| |||| ||| |||||  ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  387 tctttc 392  Q
    ||||||    
T  41608493 tctttc 41608488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 391
Target Start/End: Complemental strand, 44548473 - 44548372
Alignment:
Q  290 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 389  Q
    |||||||| ||||||||| |||||||| |||||| |  |||| ||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  390 tt 391  Q
    ||    
T  44548373 tt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| |||||||  |||||| |  ||||||||| |||||||| |||||||||||||||||||  ||| |||||  ||  |||| |||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  387 tcttt 391  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 48716382 - 48716278
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||||  ||| ||||| |||  |||| ||||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  387 tcttt 391  Q
    |||||    
T  48716282 tcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 8346490 - 8346384
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| |||| || | |||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| ||   |||| |||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactt 8346391  T
Q  385 tctcttt 391  Q
    |||||||    
T  8346390 tctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 38632423 - 38632317
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    ||||||||||||| ||||||| |||||||||| |||||| |  || ||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  385 tctcttt 391  Q
    | |||||    
T  38632323 tttcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 44453984 - 44454090
Alignment:
Q  292 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| ||||||| | ||| |||| ||||||||  |||| ||| |||||||||||||||| ||| | | |||||||||| |||| |||||||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T
Q  392 catctca 398  Q
    | |||||    
T  44454084 cctctca 44454090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 37926539 - 37926434
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| ||||| ||| |||||||| ||||||||  || ||||| ||| ||||||||||||||||  ||  |||||||| |||||  |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  386 ctcttt 391  Q
    ||||||    
T  37926439 ctcttt 37926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 50591100 - 50590995
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  387 tctttc 392  Q
    ||||||    
T  50591000 tctttc 50590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 392
Target Start/End: Complemental strand, 5959102 - 5958995
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||| ||| ||||| |||| |||||| |  |||||||| |||||||||||||||| ||| |||| |||| |||  ||||  ||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactt 5959003  T
Q  385 tctctttc 392  Q
    ||||||||    
T  5959002 tctctttc 5958995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 397
Target Start/End: Original strand, 7740732 - 7740843
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    ||||| |||||| || |||| ||||| |||  |||||||||||||||||||||| |||||| |||||||||   ||||||| |||| ||||  | | |||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaatatatttt 7740831  T
Q  386 ctctttcatctc 397  Q
    || |||||||||    
T  7740832 ctttttcatctc 7740843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 23597193 - 23597122
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 356  Q
    ||||||||||||| ||||||||| |||||||| ||||||  | |||| ||| ||| ||||||||||||||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 49811630 - 49811559
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 355  Q
    ||||||| |||||| |||||||||||||||||  |||||| |  |||||| | |||||||||||||||||||    
T  49811630 taagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgt 49811559  T

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Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 391
Target Start/End: Original strand, 26440741 - 26440838
Alignment:
Q  294 gatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||| |||||||||||||| ||  |||||| || || ||||| ||||||||||||||||||||  ||  ||||||||  | || ||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttt 26440838  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 41758804 - 41758909
Alignment:
Q  286 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 385  Q
    |||||||||||| ||||||| | |||  ||| |||||| || |||||| | |||||||||||||||||||  |||  |||| |||  |||| ||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  386 ctcttt 391  Q
    ||||||    
T  41758904 ctcttt 41758909  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 11152476 - 11152368
Alignment:
Q  288 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 387  Q
    |||||||| | ||||||| |||||||||| |||||| || | |||| | |||||||||||||||||||  |||||| || |||  |||| ||| ||||||    
T  11152476 agtaatgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T
Q  388 ctttcatctc 397  Q
     |||| ||||    
T  11152377 ttttcctctc 11152368  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 13414792 - 13414865
Alignment:
Q  318 aatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 391  Q
    |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||| |||| |||| |||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 26274429 - 26274498
Alignment:
Q  284 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 353  Q
    ||||| |||||||| ||||||| ||||| |||| ||||||||  |||||| | ||| |||||||||||||    
T  26274429 taagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacac 26274498  T

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Target: scaffold1268 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 1029 - 919
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||||| |||||||| |||||| || || ||| | ||||||||| |||||||||  ||| ||| |||||  |||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  387 tctttcatctc 397  Q
    |||||| ||||    
T  929 tctttcctctc 919  T

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Target: scaffold1267 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 1029 - 919
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||||| |||||||| |||||| || || ||| | ||||||||| |||||||||  ||| ||| |||||  |||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  387 tctttcatctc 397  Q
    |||||| ||||    
T  929 tctttcctctc 919  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 10211 - 10105
Alignment:
Q  285 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 384  Q
    |||||| |||||| ||||||| | |||||||| ||||||||| |||||| | ||| |||||||||||||||  ||| ||||| | | ||||| |||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactt 10112  T
Q  385 tctcttt 391  Q
    |||||||    
T  10111 tctcttt 10105  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 152518 - 152603
Alignment:
Q  307 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 392  Q
    |||| ||||| |||||| || |||||||| |||||||||||||||| ||| |||| ||||||||  ||||  ||||||||||||||    
T  152518 ccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttc 152603  T

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Target: scaffold0237 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 4029 - 4133
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    ||||||||||| ||||||| | |||| ||| |||||| |  || ||||| |||||||||||||||||||  | | |||||||||  | || |||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  387 tcttt 391  Q
    |||||    
T  4129 tcttt 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 8963 - 8858
Alignment:
Q  287 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 386  Q
    |||| |||||||||||||||||||| |||  ||||||    |||||| |||||||||||| |||||| |  ||| ||||| |||| ||||  ||| ||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  387 tctttc 392  Q
    ||||||    
T  8863 tctttc 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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