View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6649_high_5 (Length: 541)
Name: NF6649_high_5
Description: NF6649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6649_high_5 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 287; Significance: 1e-161; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 217 - 523
Target Start/End: Complemental strand, 1500333 - 1500027
Alignment:
| Q |
217 |
gacaagatgacaatccgcaaagactatggtgactctggagagcaaggatggaagcttcccataaactcttcctttattcttaccagagttctcaaagata |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1500333 |
gacaagatgacaatccgcaaagactatggtgactatggagagcaagtatggaagcttcccataaactcttcctttattcttaccagagttctcaaagata |
1500234 |
T |
 |
| Q |
317 |
aatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatggaggagtatatggagcaccattccactgttaacacttgg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1500233 |
aatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatggaggagtatatggagcaccattccactgttaacacttgg |
1500134 |
T |
 |
| Q |
417 |
ataaaggtggagaattggagacggaaaaagtatcaatgtatggtctgatctgtggattagaactcgtaacaatatgaagcctacaacaccaccactttat |
516 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
1500133 |
atataggtggagaattggagacggaaaaagtatcaatgtatggtctgatctgtggattagaactcgtaacaatatgaagcctacaacaacaccactgtat |
1500034 |
T |
 |
| Q |
517 |
caccacc |
523 |
Q |
| |
|
||||||| |
|
|
| T |
1500033 |
caccacc |
1500027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 1503882 - 1503674
Alignment:
| Q |
13 |
aatattcagaattggagccaaagatcactttctagagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattgcatgagtgatt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1503882 |
aatattcagaattggagccaaagatcactttttagagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattgcatgagtgatt |
1503783 |
T |
 |
| Q |
113 |
ttcttcttcctacctcttttggagaagaaattgaaaggatgctgaactctttttactcaggttcaaagaaaaatggagcgttcggtatcaattggctcaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1503782 |
ttcttcttcctacctcttttggagaagaaattgaaaggatgctgaactctttttactcaggttcaaagaaaaatggagcgttcggtatcaattggctcaa |
1503683 |
T |
 |
| Q |
213 |
atgggacaa |
221 |
Q |
| |
|
||||||||| |
|
|
| T |
1503682 |
atgggacaa |
1503674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 427
Target Start/End: Original strand, 1362131 - 1362301
Alignment:
| Q |
257 |
agcaaggatggaagcttcccataaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttgg |
356 |
Q |
| |
|
|||||||||||||||| | |||| ||||||||| | | || |||| ||||||||||| ||||||||| ||||||| || ||||||| |||| |||| |
|
|
| T |
1362131 |
agcaaggatggaagctcctcatagactcttcctctctcctcaccaaagttctcaaagctaaatatttccctagaagcgggtttttgggcgccactattgg |
1362230 |
T |
 |
| Q |
357 |
taatagtccaagctatacatggaggagtatatggagcaccattccactgttaacacttggataaaggtgga |
427 |
Q |
| |
|
| |||||||||| | || ||||||||||| |||||||| |||||| ||||| | ||||| || ||||||| |
|
|
| T |
1362231 |
tcatagtccaagtttcacgtggaggagtatttggagcactattccaatgttatctcttggttataggtgga |
1362301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 350
Target Start/End: Original strand, 33469899 - 33469946
Alignment:
| Q |
303 |
agttctcaaagataaatattttcctagaaatggatttttggatgccaa |
350 |
Q |
| |
|
||||||||||| ||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
33469899 |
agttctcaaagttaaatattttcttagaagtggatttttggatgccaa |
33469946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 29016584 - 29016661
Alignment:
| Q |
40 |
ctttctagagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattgcatgagtgattttctt |
117 |
Q |
| |
|
|||||| | ||||||||||||||| | || ||||| ||||| |||| ||||||||| ||||| ||| ||| ||||||| |
|
|
| T |
29016584 |
ctttctcgtgcaggtaaagaggttcttattaaatcggttgcgcaagctattccttcatattgtatgggtgcttttctt |
29016661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 32498269 - 32498354
Alignment:
| Q |
307 |
ctcaaagataaatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatggaggagtatatggag |
392 |
Q |
| |
|
||||||| |||||||||||| ||| | |||||||||||||| || ||| ||| |||||| || |||||||||||| ||||||| |
|
|
| T |
32498269 |
ctcaaagctaaatattttccccgaagggattttttggatgccaatctaggtcataatccaagttacacatggaggagtctatggag |
32498354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 133; Significance: 7e-69; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 257 - 457
Target Start/End: Original strand, 14040665 - 14040865
Alignment:
| Q |
257 |
agcaaggatggaagcttcccataaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttgg |
356 |
Q |
| |
|
||||||||| |||||||| |||||||||||| | || |||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||| | |
|
|
| T |
14040665 |
agcaaggattgaagcttcttctaaactcttcctctgtttttaccaaagttctcaaagctaaatactttcctagaattggatttttggatgccaaactatg |
14040764 |
T |
 |
| Q |
357 |
taatagtccaagctatacatggaggagtatatggagcaccattccactgttaacacttggataaaggtggagaattggagacggaaaaagtatcaatgta |
456 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14040765 |
tcatagtccaagctatacatggaggagtatatggagcaccattccacttttaacacttggatataggtggagaattggagacgaaaaaagtatcaatgta |
14040864 |
T |
 |
| Q |
457 |
t |
457 |
Q |
| |
|
| |
|
|
| T |
14040865 |
t |
14040865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 164
Target Start/End: Original strand, 11625903 - 11626003
Alignment:
| Q |
64 |
ttaatcaaatcagttgcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaattgaaaggatgctgaactctt |
163 |
Q |
| |
|
||||||||||| || ||||||| |||||||||||||||||| | | ||||| |||||||||| || | ||||| || ||||||||| ||||||||| |
|
|
| T |
11625903 |
ttaatcaaatcggtggcccaagccattccttcttattgcatgggggcctttctcattcctacctccctttgcgaagagatagaaaggatgatgaactctt |
11626002 |
T |
 |
| Q |
164 |
t |
164 |
Q |
| |
|
| |
|
|
| T |
11626003 |
t |
11626003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 164
Target Start/End: Complemental strand, 9182370 - 9182270
Alignment:
| Q |
64 |
ttaatcaaatcagttgcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaattgaaaggatgctgaactctt |
163 |
Q |
| |
|
||||||||||| || ||||||| |||||||||||||||||| | | ||||| |||||||||| || | || || || ||||||||| ||||||||| |
|
|
| T |
9182370 |
ttaatcaaatcggtggcccaagccattccttcttattgcatgggggcctttctcattcctacctccctttgcgatgagatagaaaggatgatgaactctt |
9182271 |
T |
 |
| Q |
164 |
t |
164 |
Q |
| |
|
| |
|
|
| T |
9182270 |
t |
9182270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 76; Significance: 7e-35; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 279 - 518
Target Start/End: Original strand, 19963069 - 19963307
Alignment:
| Q |
279 |
aaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatgg |
378 |
Q |
| |
|
|||||| |||| ||||||||| |||||||||||| |||||||||||| | ||||||||| |||||| | ||||||| |||||||||| | |||||| |
|
|
| T |
19963069 |
aaactcgtcctctattcttactagagttctcaaaactaaatattttcc-ataaatggattcttggatactgaacttggacatagtccaagtttcacatgg |
19963167 |
T |
 |
| Q |
379 |
aggagtatatggagcaccattccactgttaacacttggataaaggtggagaattggagacggaaaaagtatcaatgtatggtctgatctgtggattagaa |
478 |
Q |
| |
|
| |||||||| ||||||||||||| ||||||| | | | || ||||||| || |||||| |||| | || |||||||| ||||||| |||||||||| |
|
|
| T |
19963168 |
atgagtatattgagcaccattccaatgttaactcctagttataggtggaaaaatggagatggaagtaaaattaatgtatgaactgatctatggattagaa |
19963267 |
T |
 |
| Q |
479 |
ctcgtaacaatatgaagcctacaacaccaccactttatca |
518 |
Q |
| |
|
|||| | ||||||||||||||||||||||| ||| |||| |
|
|
| T |
19963268 |
ctcgccaaaatatgaagcctacaacaccaccccttcatca |
19963307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 29291329 - 29291432
Alignment:
| Q |
46 |
agagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaattg |
145 |
Q |
| |
|
||||||||||||||||| | |||||||| ||||| |||| |||||||| ||||| ||| | | |||||| |||| |||||||| | |||||||||| |
|
|
| T |
29291329 |
agagcaggtaaagaggtgctcatcaaatcggttgctcaagcaattccttcatattgtatgggagcttttctcattccaacctctttatgtgaagaaattg |
29291428 |
T |
 |
| Q |
146 |
aaag |
149 |
Q |
| |
|
|||| |
|
|
| T |
29291429 |
aaag |
29291432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 23149992 - 23150077
Alignment:
| Q |
307 |
ctcaaagataaatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatggaggagtatatggag |
392 |
Q |
| |
|
||||||| |||||||||||| ||| | |||||||||||||| || ||| ||| |||||| || |||||||||||| ||||||| |
|
|
| T |
23149992 |
ctcaaagctaaatattttccccgaagggattttttggatgccaatctaggtcataatccaagttacacatggaggagtctatggag |
23150077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 402
Target Start/End: Complemental strand, 2927949 - 2927804
Alignment:
| Q |
257 |
agcaaggatggaagcttcccataaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttgg |
356 |
Q |
| |
|
||||| |||||||||| | || ||||||| || | ||||||| |||||||||||| || ||||||||||| ||| || |||||||| |||| |||| |
|
|
| T |
2927949 |
agcaaagatggaagctcctcacaaactctgactctcttcttactcgagttctcaaagttagatattttcctataaacggttttttggacaccaatattgg |
2927850 |
T |
 |
| Q |
357 |
taatagtccaagctatacatggaggagtatatggagcaccattcca |
402 |
Q |
| |
|
| |||||||||| | |||||||||||||| |||||||| |||||| |
|
|
| T |
2927849 |
tcatagtccaagtttcacatggaggagtatttggagcactattcca |
2927804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 24465717 - 24465820
Alignment:
| Q |
46 |
agagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaattg |
145 |
Q |
| |
|
||||||||||||||||| | |||||||| ||||| |||| |||||||| ||||| ||| | | |||||| |||| |||||||| | |||||||||| |
|
|
| T |
24465717 |
agagcaggtaaagaggtgctcatcaaatcggttgctcaagcaattccttcatattgtatgggagcttttctcattccaacctctttatgtgaagaaattg |
24465816 |
T |
 |
| Q |
146 |
aaag |
149 |
Q |
| |
|
|||| |
|
|
| T |
24465817 |
aaag |
24465820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 8072702 - 8072641
Alignment:
| Q |
40 |
ctttctagagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattg |
101 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||| ||||| |||| |||||||||||||| |
|
|
| T |
8072702 |
ctttctagagctggtaaagaggtgctcatcaaatctgttgctcaagcaattccttcttattg |
8072641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 386
Target Start/End: Original strand, 2901579 - 2901706
Alignment:
| Q |
259 |
caaggatggaagcttcccataaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttggta |
358 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | || || ||||||||||||||||||||||| ||||||| | ||||||| ||||| ||||| |
|
|
| T |
2901579 |
caaggatggaagctcttcacaaactcttcctttctcctcactagagttctcaaagataaatatttccctagaagcagctttttgggcgccaatattggtc |
2901678 |
T |
 |
| Q |
359 |
atagtccaagctatacatggaggagtat |
386 |
Q |
| |
|
||||| |||| | |||||||||||||| |
|
|
| T |
2901679 |
atagtacaagtttcacatggaggagtat |
2901706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 401
Target Start/End: Complemental strand, 10533122 - 10532977
Alignment:
| Q |
257 |
agcaaggatggaagct-tcccataaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttg |
355 |
Q |
| |
|
|||||||||| ||||| | ||| |||||| |||||| | || || ||||||||||||| ||||||||| ||||||| |||||||| ||||| ||| |
|
|
| T |
10533122 |
agcaaggatgaaagctcttccacaaactcctcctttctcctcactagagttctcaaagctaaatatttccctagaagaagatttttgagcgccaatattg |
10533023 |
T |
 |
| Q |
356 |
gtaatagtccaagctatacatggaggagtatatggagcaccattcc |
401 |
Q |
| |
|
|| ||||||||| | |||||||||||||| |||||||| ||||| |
|
|
| T |
10533022 |
gtcgtagtccaagtttcacatggaggagtatctggagcactattcc |
10532977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 52843280 - 52843172
Alignment:
| Q |
260 |
aaggatggaagcttcccataaactcttcctttattcttaccagagttctcaaagataaatattttcctagaaatggatttttggatgccaaacttggtaa |
359 |
Q |
| |
|
||||||||||||| | || ||||||||||| | | || |||| ||||||||||| ||||||||| ||||||| || ||||||| |||| ||||| | |
|
|
| T |
52843280 |
aaggatggaagctcctcacaaactcttcctctctcctcaccaaagttctcaaagctaaatatttccctagaagcgggtttttgggcgccactattggtca |
52843181 |
T |
 |
| Q |
360 |
tagtccaag |
368 |
Q |
| |
|
||||||||| |
|
|
| T |
52843180 |
tagtccaag |
52843172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 4755776 - 4755729
Alignment:
| Q |
337 |
tttttggatgccaaacttggtaatagtccaagctatacatggaggagt |
384 |
Q |
| |
|
|||||||||||||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
4755776 |
tttttggatgccaaccttggctataatccaagctatacatggaggagt |
4755729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 6864159 - 6864256
Alignment:
| Q |
67 |
atcaaatcagttgcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaattgaaaggatgctgaactcttt |
164 |
Q |
| |
|
||||||||||||| ||||| |||||| || ||||| ||| | |||||||| || || ||||| || | ||||| |||||||||||| |||| ||||| |
|
|
| T |
6864159 |
atcaaatcagttgtccaagctattccctcctattgtatgggggattttctcctccccacctccttatgcgaagagattgaaaggatgatgaattcttt |
6864256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 36917556 - 36917492
Alignment:
| Q |
79 |
gcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaat |
143 |
Q |
| |
|
||||||||||||||||| ||||||||| | | ||| ||||||||||| || |||| |||||||| |
|
|
| T |
36917556 |
gcccaagttattccttcatattgcatgggagctttccttcttcctactactcttggcgaagaaat |
36917492 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 10160596 - 10160494
Alignment:
| Q |
62 |
ttttaatcaaatcagttgcccaagttattccttcttattgcatgagtgattttcttcttcctacctcttttggagaagaaattgaaaggatgctgaactc |
161 |
Q |
| |
|
||||||||||||| || ||||||| |||||||||||||||||| | | ||||| |||||||||| || | || || || ||||||||| ||||||| |
|
|
| T |
10160596 |
ttttaatcaaatcggtggcccaagccattccttcttattgcatgggggcctttctcattcctacctccctttgcgatgagatagaaaggatgatgaactc |
10160497 |
T |
 |
| Q |
162 |
ttt |
164 |
Q |
| |
|
||| |
|
|
| T |
10160496 |
ttt |
10160494 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 21950876 - 21950937
Alignment:
| Q |
40 |
ctttctagagcaggtaaagaggttttaatcaaatcagttgcccaagttattccttcttattg |
101 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||| ||||| |||| |||||||||||||| |
|
|
| T |
21950876 |
ctttctagagctggtaaagaggtgctcatcaaatctgttgctcaagcaattccttcttattg |
21950937 |
T |
 |
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Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 12352094 - 12352009
Alignment:
| Q |
307 |
ctcaaagataaatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatggaggagtatatggag |
392 |
Q |
| |
|
||||||| |||||||||||| ||| | |||||||||||||| || ||| ||| |||||| || |||||||||||| ||||||| |
|
|
| T |
12352094 |
ctcaaagctaaatattttccccgaagggattttttggatgccaatctaggtcataatccaagttacacatggaggagtctatggag |
12352009 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 22331098 - 22331045
Alignment:
| Q |
293 |
ttcttaccagagttctcaaagataaatattttcctagaaatggatttttggatg |
346 |
Q |
| |
|
||||||| | || |||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
22331098 |
ttcttactaaaggtctcaaagcaaaatattttcctaaaaatggatttttggatg |
22331045 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 41146477 - 41146562
Alignment:
| Q |
307 |
ctcaaagataaatattttcctagaaatggatttttggatgccaaacttggtaatagtccaagctatacatggaggagtatatggag |
392 |
Q |
| |
|
||||||| |||||||||||| ||| | |||||||||||||| || ||| ||| |||||| || |||||||||||| ||||||| |
|
|
| T |
41146477 |
ctcaaagctaaatattttccccgaagggattttttggatgccaatctaggtcataatccaagttacacatggaggagtctatggag |
41146562 |
T |
 |
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