View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6649_high_9 (Length: 430)

Name: NF6649_high_9
Description: NF6649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6649_high_9
NF6649_high_9
[»] chr1 (44 HSPs)
chr1 (102-424)||(9830452-9830775)
chr1 (3-72)||(9830786-9830855)
chr1 (220-284)||(51589819-51589883)
chr1 (220-327)||(17452686-17452789)
chr1 (220-293)||(4112547-4112620)
chr1 (220-330)||(17452835-17452941)
chr1 (220-330)||(35772235-35772341)
chr1 (220-330)||(42586446-42586551)
chr1 (220-276)||(25145492-25145548)
chr1 (220-329)||(40079124-40079229)
chr1 (233-326)||(52961557-52961646)
chr1 (210-330)||(2859389-2859505)
chr1 (220-336)||(4113013-4113124)
chr1 (223-331)||(31181523-31181627)
chr1 (74-131)||(10913933-10913990)
chr1 (220-273)||(27413371-27413424)
chr1 (210-275)||(27413604-27413669)
chr1 (74-131)||(33619063-33619120)
chr1 (74-131)||(37172415-37172472)
chr1 (74-131)||(43191823-43191880)
chr1 (74-131)||(50096292-50096349)
chr1 (223-284)||(51589005-51589066)
chr1 (220-330)||(38733353-38733459)
chr1 (220-284)||(51589239-51589303)
chr1 (234-277)||(5953497-5953540)
chr1 (304-335)||(17468310-17468341)
chr1 (301-335)||(21626423-21626457)
chr1 (223-330)||(25137313-25137416)
chr1 (74-131)||(33716-33773)
chr1 (231-284)||(3170014-3170067)
chr1 (223-284)||(5953206-5953267)
chr1 (74-127)||(14602169-14602222)
chr1 (74-131)||(20061965-20062022)
chr1 (74-131)||(26244708-26244765)
chr1 (220-273)||(40316057-40316110)
chr1 (74-131)||(50624925-50624982)
chr1 (224-272)||(2859638-2859686)
chr1 (220-276)||(3169787-3169843)
chr1 (220-284)||(9499259-9499322)
chr1 (220-276)||(31432237-31432293)
chr1 (220-260)||(31496378-31496418)
chr1 (220-276)||(33156754-33156810)
chr1 (220-276)||(35772050-35772106)
chr1 (220-276)||(52907405-52907461)
[»] chr7 (46 HSPs)
chr7 (220-335)||(11211686-11211796)
chr7 (224-275)||(42985134-42985185)
chr7 (224-274)||(26028972-26029022)
chr7 (74-131)||(19476553-19476610)
chr7 (220-330)||(36277233-36277339)
chr7 (220-330)||(48661562-48661668)
chr7 (224-276)||(23796034-23796086)
chr7 (223-330)||(1596799-1596902)
chr7 (211-293)||(22574840-22574921)
chr7 (224-330)||(3038095-3038197)
chr7 (220-330)||(17202150-17202256)
chr7 (223-330)||(21054963-21055066)
chr7 (220-293)||(25620140-25620213)
chr7 (220-330)||(29469576-29469682)
chr7 (223-284)||(40746278-40746339)
chr7 (74-131)||(42517026-42517083)
chr7 (220-293)||(48243068-48243141)
chr7 (223-271)||(24432148-24432196)
chr7 (220-276)||(34027414-34027470)
chr7 (220-275)||(6782883-6782938)
chr7 (76-131)||(34487303-34487358)
chr7 (220-275)||(36206070-36206125)
chr7 (220-274)||(4506955-4507009)
chr7 (223-330)||(21861265-21861368)
chr7 (223-293)||(21861533-21861603)
chr7 (77-131)||(23177209-23177263)
chr7 (223-330)||(47710414-47710517)
chr7 (223-330)||(47722070-47722173)
chr7 (74-131)||(24523-24580)
chr7 (74-135)||(13426455-13426516)
chr7 (74-131)||(19157852-19157909)
chr7 (74-131)||(20757251-20757308)
chr7 (223-276)||(21822064-21822117)
chr7 (220-330)||(29469811-29469917)
chr7 (74-131)||(31579598-31579655)
chr7 (220-330)||(33996318-33996424)
chr7 (74-131)||(40729222-40729279)
chr7 (223-272)||(40991754-40991803)
chr7 (224-293)||(48243448-48243517)
chr7 (220-276)||(2544454-2544510)
chr7 (220-276)||(4886350-4886406)
chr7 (220-284)||(10903098-10903162)
chr7 (232-272)||(21311415-21311455)
chr7 (75-131)||(22364820-22364875)
chr7 (220-276)||(31257038-31257094)
chr7 (233-293)||(31485679-31485739)
[»] chr6 (36 HSPs)
chr6 (211-330)||(9705225-9705340)
chr6 (220-330)||(12329951-12330057)
chr6 (220-276)||(21690743-21690799)
chr6 (211-330)||(6054374-6054489)
chr6 (220-330)||(4868584-4868690)
chr6 (220-330)||(6542950-6543056)
chr6 (220-330)||(12330298-12330403)
chr6 (220-330)||(25065101-25065207)
chr6 (223-330)||(33494510-33494613)
chr6 (74-131)||(3484943-3485000)
chr6 (220-293)||(4868820-4868893)
chr6 (74-131)||(5404729-5404786)
chr6 (220-293)||(12330186-12330259)
chr6 (220-335)||(30256779-30256889)
chr6 (74-135)||(33783560-33783621)
chr6 (221-330)||(6237715-6237815)
chr6 (220-276)||(8026410-8026466)
chr6 (220-276)||(8026625-8026681)
chr6 (231-293)||(4906810-4906872)
chr6 (223-330)||(13353172-13353275)
chr6 (77-131)||(28853647-28853701)
chr6 (223-330)||(33796297-33796400)
chr6 (220-276)||(7915872-7915926)
chr6 (74-131)||(8926346-8926403)
chr6 (78-131)||(17238197-17238250)
chr6 (74-131)||(19661516-19661573)
chr6 (227-276)||(20830771-20830820)
chr6 (74-131)||(29819545-29819602)
chr6 (74-131)||(30609033-30609090)
chr6 (79-131)||(4601117-4601169)
chr6 (233-293)||(5648692-5648752)
chr6 (220-276)||(11721926-11721982)
chr6 (63-131)||(16525341-16525409)
chr6 (233-330)||(17147680-17147773)
chr6 (220-284)||(20373584-20373647)
chr6 (220-276)||(30256599-30256655)
[»] chr3 (37 HSPs)
chr3 (220-330)||(54368487-54368593)
chr3 (220-335)||(45138978-45139089)
chr3 (74-131)||(16056507-16056564)
chr3 (220-330)||(20327621-20327727)
chr3 (220-330)||(35038201-35038307)
chr3 (63-131)||(46962749-46962817)
chr3 (211-335)||(45138800-45138920)
chr3 (223-330)||(38791460-38791563)
chr3 (220-330)||(16926956-16927062)
chr3 (220-330)||(20303071-20303177)
chr3 (223-329)||(22729072-22729174)
chr3 (74-131)||(26582779-26582836)
chr3 (74-131)||(27934610-27934667)
chr3 (74-131)||(32315543-32315600)
chr3 (74-131)||(52835704-52835761)
chr3 (220-276)||(1723083-1723139)
chr3 (220-276)||(11589806-11589862)
chr3 (220-276)||(31317249-31317305)
chr3 (221-330)||(35038436-35038541)
chr3 (220-275)||(24866219-24866274)
chr3 (233-276)||(45828040-45828083)
chr3 (77-131)||(33162487-33162541)
chr3 (210-276)||(34610582-34610648)
chr3 (223-272)||(13741111-13741160)
chr3 (74-131)||(14546003-14546060)
chr3 (220-330)||(16239562-16239668)
chr3 (224-330)||(20327860-20327962)
chr3 (74-131)||(29838461-29838518)
chr3 (74-131)||(49121875-49121932)
chr3 (74-131)||(49500002-49500059)
chr3 (74-131)||(50645631-50645688)
chr3 (220-293)||(54567896-54567969)
chr3 (220-276)||(4155345-4155401)
chr3 (220-272)||(6487340-6487392)
chr3 (220-280)||(33205482-33205542)
chr3 (220-276)||(50052546-50052602)
chr3 (231-336)||(50930667-50930768)
[»] scaffold0766 (1 HSPs)
scaffold0766 (210-330)||(6245-6361)
[»] chr8 (48 HSPs)
chr8 (233-336)||(38447447-38447546)
chr8 (220-333)||(22638186-22638295)
chr8 (220-330)||(15042677-15042783)
chr8 (220-330)||(17469789-17469895)
chr8 (220-330)||(17477036-17477142)
chr8 (224-330)||(24532432-24532534)
chr8 (220-330)||(39052936-39053042)
chr8 (220-330)||(39743500-39743606)
chr8 (220-276)||(20702818-20702874)
chr8 (210-330)||(39960162-39960279)
chr8 (210-330)||(10449971-10450087)
chr8 (224-335)||(8716080-8716187)
chr8 (220-274)||(34843140-34843194)
chr8 (74-131)||(3272879-3272936)
chr8 (216-273)||(4828092-4828149)
chr8 (223-329)||(5590378-5590480)
chr8 (74-131)||(13154398-13154455)
chr8 (223-276)||(18939307-18939360)
chr8 (220-330)||(19256593-19256699)
chr8 (74-131)||(24332421-24332478)
chr8 (74-131)||(26479461-26479518)
chr8 (220-330)||(28069364-28069470)
chr8 (220-273)||(29005888-29005941)
chr8 (74-131)||(31403080-31403137)
chr8 (220-277)||(42846612-42846669)
chr8 (220-276)||(24075313-24075369)
chr8 (74-130)||(27993445-27993501)
chr8 (74-130)||(28050747-28050803)
chr8 (303-335)||(30201610-30201642)
chr8 (223-335)||(4828259-4828367)
chr8 (220-333)||(37001194-37001303)
chr8 (223-330)||(11232204-11232307)
chr8 (77-131)||(31186535-31186589)
chr8 (223-276)||(3157569-3157622)
chr8 (303-336)||(8466810-8466843)
chr8 (220-293)||(12688076-12688149)
chr8 (220-330)||(19256827-19256933)
chr8 (220-293)||(20301265-20301338)
chr8 (220-293)||(21087897-21087970)
chr8 (211-276)||(27205181-27205246)
chr8 (306-335)||(29907815-29907844)
chr8 (74-131)||(31685829-31685886)
chr8 (220-293)||(35682788-35682861)
chr8 (220-272)||(10614946-10614998)
chr8 (220-276)||(10884086-10884141)
chr8 (220-268)||(15686047-15686095)
chr8 (220-276)||(27204985-27205041)
chr8 (220-276)||(27205083-27205139)
[»] chr5 (43 HSPs)
chr5 (223-330)||(24346511-24346614)
chr5 (63-131)||(7133273-7133341)
chr5 (220-336)||(1564574-1564686)
chr5 (210-330)||(41666754-41666870)
chr5 (224-335)||(15438843-15438950)
chr5 (223-330)||(24269881-24269983)
chr5 (220-335)||(28510057-28510168)
chr5 (220-330)||(24346744-24346850)
chr5 (220-330)||(41667000-41667106)
chr5 (220-284)||(27133000-27133064)
chr5 (220-263)||(9187320-9187363)
chr5 (223-330)||(17352445-17352547)
chr5 (74-131)||(6497351-6497408)
chr5 (74-131)||(10461512-10461569)
chr5 (74-131)||(22394291-22394348)
chr5 (220-293)||(24531603-24531676)
chr5 (74-135)||(29991261-29991322)
chr5 (223-335)||(7369690-7369798)
chr5 (224-284)||(17015890-17015950)
chr5 (220-276)||(19522341-19522397)
chr5 (220-276)||(25258101-25258157)
chr5 (220-276)||(25258308-25258364)
chr5 (220-276)||(25321891-25321947)
chr5 (220-276)||(25322098-25322154)
chr5 (74-129)||(24491012-24491067)
chr5 (233-284)||(38731623-38731674)
chr5 (231-293)||(6413444-6413506)
chr5 (224-330)||(8081124-8081227)
chr5 (223-330)||(9368801-9368904)
chr5 (223-330)||(18333475-18333578)
chr5 (223-273)||(38731848-38731898)
chr5 (74-131)||(14868832-14868889)
chr5 (74-131)||(18786148-18786205)
chr5 (220-273)||(20225065-20225118)
chr5 (220-293)||(21306891-21306964)
chr5 (220-293)||(21314729-21314802)
chr5 (224-293)||(24528544-24528613)
chr5 (74-131)||(41137300-41137357)
chr5 (220-277)||(43117902-43117959)
chr5 (220-276)||(8098338-8098394)
chr5 (220-276)||(19522108-19522164)
chr5 (220-272)||(24487652-24487704)
chr5 (220-276)||(33337462-33337518)
[»] chr4 (50 HSPs)
chr4 (232-335)||(44118878-44118977)
chr4 (220-330)||(35788630-35788736)
chr4 (211-330)||(35788865-35788980)
chr4 (220-330)||(22827509-22827615)
chr4 (220-276)||(9685653-9685709)
chr4 (220-276)||(12005476-12005532)
chr4 (210-330)||(22845444-22845560)
chr4 (77-135)||(26314638-26314696)
chr4 (223-330)||(39902573-39902676)
chr4 (231-335)||(53698993-53699093)
chr4 (74-131)||(989242-989299)
chr4 (220-330)||(6218410-6218516)
chr4 (74-131)||(11021832-11021889)
chr4 (74-131)||(13683163-13683220)
chr4 (74-131)||(17107591-17107648)
chr4 (220-330)||(21498766-21498872)
chr4 (74-131)||(22487379-22487436)
chr4 (220-330)||(28245533-28245639)
chr4 (74-131)||(46081541-46081598)
chr4 (74-131)||(46481076-46481133)
chr4 (220-330)||(50543574-50543680)
chr4 (220-276)||(1518185-1518241)
chr4 (220-276)||(22231315-22231371)
chr4 (237-335)||(27464272-27464366)
chr4 (220-276)||(53559297-53559353)
chr4 (234-293)||(35796763-35796822)
chr4 (223-293)||(400575-400645)
chr4 (222-276)||(5398221-5398275)
chr4 (76-130)||(12792740-12792794)
chr4 (211-293)||(22863478-22863560)
chr4 (297-335)||(28208414-28208452)
chr4 (74-131)||(5721111-5721168)
chr4 (220-273)||(9685422-9685475)
chr4 (74-131)||(13493051-13493108)
chr4 (74-131)||(16491806-16491863)
chr4 (74-131)||(16959931-16959988)
chr4 (74-131)||(17865135-17865192)
chr4 (220-330)||(21498325-21498431)
chr4 (248-330)||(27634116-27634194)
chr4 (74-131)||(37815500-37815557)
chr4 (74-131)||(39385328-39385385)
chr4 (74-131)||(43750106-43750163)
chr4 (223-276)||(53828533-53828586)
chr4 (220-276)||(5846167-5846223)
chr4 (233-293)||(11036766-11036826)
chr4 (220-276)||(14783194-14783250)
chr4 (224-268)||(30529937-30529981)
chr4 (220-276)||(35819135-35819191)
chr4 (233-330)||(37836051-37836144)
chr4 (220-276)||(50543337-50543393)
[»] chr2 (38 HSPs)
chr2 (210-330)||(16419473-16419589)
chr2 (210-330)||(40379206-40379322)
chr2 (74-131)||(17457885-17457942)
chr2 (74-131)||(18369180-18369237)
chr2 (220-330)||(40379451-40379557)
chr2 (220-276)||(2324495-2324551)
chr2 (220-284)||(17854936-17855000)
chr2 (223-271)||(27897513-27897561)
chr2 (74-134)||(33940841-33940901)
chr2 (74-131)||(3371461-3371518)
chr2 (220-330)||(5711446-5711552)
chr2 (74-131)||(12806708-12806765)
chr2 (248-330)||(33606089-33606167)
chr2 (74-131)||(41594118-41594175)
chr2 (74-131)||(42705111-42705168)
chr2 (220-276)||(2324261-2324317)
chr2 (63-131)||(7877491-7877559)
chr2 (220-276)||(15124555-15124611)
chr2 (220-284)||(29718341-29718405)
chr2 (75-131)||(37609123-37609179)
chr2 (304-335)||(10523219-10523250)
chr2 (220-332)||(14927071-14927179)
chr2 (77-131)||(13572633-13572687)
chr2 (231-293)||(16533551-16533613)
chr2 (235-330)||(17719371-17719462)
chr2 (77-131)||(30432762-30432816)
chr2 (74-131)||(4171684-4171741)
chr2 (78-131)||(6880140-6880193)
chr2 (74-131)||(14379280-14379337)
chr2 (220-273)||(19191617-19191670)
chr2 (74-131)||(19204751-19204808)
chr2 (220-330)||(28407800-28407906)
chr2 (74-131)||(29683333-29683390)
chr2 (220-330)||(32884078-32884184)
chr2 (248-330)||(37812533-37812611)
chr2 (63-131)||(2395305-2395373)
chr2 (220-276)||(37769950-37770006)
chr2 (233-273)||(40149023-40149063)
[»] scaffold0692 (1 HSPs)
scaffold0692 (220-330)||(5761-5867)
[»] scaffold0167 (1 HSPs)
scaffold0167 (74-131)||(4554-4611)
[»] scaffold0103 (1 HSPs)
scaffold0103 (74-131)||(43444-43501)
[»] scaffold0334 (1 HSPs)
scaffold0334 (224-276)||(4440-4492)
[»] scaffold0006 (1 HSPs)
scaffold0006 (75-131)||(212579-212635)
[»] scaffold0519 (1 HSPs)
scaffold0519 (223-330)||(2122-2225)
[»] scaffold0137 (1 HSPs)
scaffold0137 (74-131)||(36932-36989)
[»] scaffold0092 (1 HSPs)
scaffold0092 (220-293)||(5659-5732)
[»] scaffold0047 (1 HSPs)
scaffold0047 (223-276)||(12668-12721)
[»] scaffold0005 (1 HSPs)
scaffold0005 (220-276)||(56480-56536)


Alignment Details
Target: chr1 (Bit Score: 272; Significance: 1e-152; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 102 - 424
Target Start/End: Complemental strand, 9830775 - 9830452
Alignment:
Q  102 ttgagggagtgaaatcaagtattctacatactacttatttaattggaccaaattacaattcgaatagattttgcgtagacgaaaacaaaaagtggtatat 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||    
T  9830775 ttgagggagtgaaatcaagtattctacatattacttatttaattggaccaaattgcaattcgaatagattttggatagaccaaaacaaaaagtggtatat 9830676  T
Q  202 ctgtcacgactctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt-ttatgtt 300  Q
     ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9830675 ttgtcacgactctgagagatcgtgattgaatctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattgttatgtt 9830576  T
Q  301 aggccatctcttatccgatgtgggactctttaacagcagcaaaagacatttttaaaccttactagtaatacagacatttttcataacactcgacgtatga 400  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  9830575 aggccatctcttatccgatgtgggactctttaacagcaacaaaagacatttttaaaccttactagtaatacagacatttgtcataacactcggcgtatga 9830476  T
Q  401 gttaagatgctaaaggagtattat 424  Q
    ||||||||||||||||||||||||    
T  9830475 gttaagatgctaaaggagtattat 9830452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 9830855 - 9830786
Alignment:
Q  3 acaatcttttgcttttgatccatgtttgttttgtttaagtccctgctaaatttgttaattttgaaattta 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9830855 acaatcttttgcttttgatccatgtttgttttgtttaagtccctgctaaatttgttaattttgatattta 9830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 51589883 - 51589819
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  51589883 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttat 51589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 327
Target Start/End: Original strand, 17452686 - 17452789
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||||||| |||    
T  17452686 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcttatctgat 17452781  T
Q  320 gtgggact 327  Q
    ||||||||    
T  17452782 gtgggact 17452789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 4112547 - 4112620
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | ||||||||| | ||||||||||||||||||| ||| |||||||| ||||||| || |||||    
T  4112547 atcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaacacatt 4112620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 17452835 - 17452941
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||||||| |||||||||||    
T  17452835 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaatacat----tgtcaggccatgtcttatccgat 17452930  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  17452931 gtgggactctt 17452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 35772341 - 35772235
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| | ||||||||||  |||||| || |||||    || |||||||||| ||||||||    
T  35772341 atcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacatt----gtcaggccatctcctatccgat 35772246  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  35772245 gtgggactctt 35772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 42586446 - 42586551
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||||||||||||||    
T  42586446 atcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattgccc-cacttatatacacat----tgtcaggccatctcttatccgat 42586540  T
Q  320 gtgggactctt 330  Q
    ||| |||||||    
T  42586541 gtgagactctt 42586551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25145492 - 25145548
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| |||||||||||||||| |||| || |||||||| ||||||||||||    
T  25145492 atcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgccc 25145548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 329
Target Start/End: Complemental strand, 40079229 - 40079124
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| |||||| ||||||||    
T  40079229 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatctcctatccgat 40079134  T
Q  320 gtgggactct 329  Q
    || |||||||    
T  40079133 gtaggactct 40079124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 52961646 - 52961557
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggac 326  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||||| |||||| || ||||    ||| || ||||||| |||||||||||||||    
T  52961646 ctaacacaaccccataaaaccggcttttgaggtgaggattgccctcacttataaacacat----tgtcagaccatctcctatccgatgtgggac 52961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 330
Target Start/End: Original strand, 2859389 - 2859505
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| || ||||||| | |||||||||||||| | || ||||||||||| | ||||||||||  |||||| || ||||    ||| ||||||||     
T  2859389 actcttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaacacat----tgtcaggccatca 2859484  T
Q  310 cttatccgatgtgggactctt 330  Q
    | |||||||||||||||||||    
T  2859485 cctatccgatgtgggactctt 2859505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 4113013 - 4113124
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||  |||||||    
T  4113013 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcccatccgat 4113108  T
Q  320 gtgggactctttaacag 336  Q
    |||||||| ||||||||    
T  4113109 gtgggact-tttaacag 4113124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 31181523 - 31181627
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||||  |||||| || |||| |    | |||||||||||||||| |||||    
T  31181523 gtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaacacatgt----tcaggccatctcttatccaatgtg 31181618  T
Q  323 ggactcttt 331  Q
    | |||||||    
T  31181619 gaactcttt 31181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 10913933 - 10913990
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  10913933 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 10913990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 27413424 - 27413371
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    ||||||||||   |||||||||||||| |||||||||||||||| |||||||||    
T  27413424 atcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattg 27413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 27413669 - 27413604
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 275  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||    
T  27413669 actcttagaaatcatggttgagcctaacacaacctcataaaaccgatttgtgaggtgaggattgcc 27413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 33619120 - 33619063
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  33619120 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 33619063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 37172472 - 37172415
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  37172472 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 37172415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 43191880 - 43191823
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  43191880 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 43191823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 50096292 - 50096349
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  50096292 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 50096349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 51589066 - 51589005
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589066 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 38733459 - 38733353
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||| |||| | |||||||||||||| |||| |||| | |||| ||||||||||||| ||||||  |||||| |  ||| || ||||| | ||||||||    
T  38733459 atcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgccctcacttat--aaacatat--tgtcagaccatcacatatccgat 38733364  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  38733363 gtgggactctt 38733353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 51589303 - 51589239
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589303 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 277
Target Start/End: Original strand, 5953497 - 5953540
Alignment:
Q  234 taacacaacctcataaaatcggcttgtgagctgaggattgccct 277  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||    
T  5953497 taacacaacctcacaaaatcggctcgtgaggtgaggattgccct 5953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 335
Target Start/End: Complemental strand, 17468341 - 17468310
Alignment:
Q  304 ccatctcttatccgatgtgggactctttaaca 335  Q
    ||||||||||||||||||||||||||||||||    
T  17468341 ccatctcttatccgatgtgggactctttaaca 17468310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 21626423 - 21626457
Alignment:
Q  301 aggccatctcttatccgatgtgggactctttaaca 335  Q
    ||||||||||||||| |||||||||||||||||||    
T  21626423 aggccatctcttatctgatgtgggactctttaaca 21626457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 25137313 - 25137416
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| |||||| |||| |||||||||||| ||||||| || | ||    ||| |||||| ||| || ||||||||    
T  25137313 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccatacttataaacaaat----tgtcaggccaactcctaaccgatgtg 25137408  T
Q  323 ggactctt 330  Q
    ||||||||    
T  25137409 ggactctt 25137416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 33716 - 33773
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  33716 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 33773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 3170067 - 3170014
Alignment:
Q  231 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    ||||||||||||| || |||| ||||||||||| | ||||||||||| ||||||    
T  3170067 gtctaacacaaccccacaaaaccggcttgtgaggtaaggattgccctcacttat 3170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 5953206 - 5953267
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    ||||||||| |||||||||||| | ||||||| ||||||||  |||||||| ||| ||||||    
T  5953206 gtggttgagcctaacacaaccttacaaaatcgacttgtgaggagaggattgtcctcacttat 5953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 14602169 - 14602222
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattcta 127  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||    
T  14602169 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattcta 14602222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 20062022 - 20061965
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| |||||||||||  | ||||||||||| | ||||||| |||||||||||    
T  20062022 ccctataatattcattttagtcatcattttgagggactaaaatcaaatattctacata 20061965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 26244708 - 26244765
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||    
T  26244708 ccctataatattcattttagtcctcattttgagggactaaaattaaatattctacata 26244765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 40316057 - 40316110
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    ||||||||||  ||||||||||||||| |||| |||||| |||| |||||||||    
T  40316057 atcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattg 40316110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 50624925 - 50624982
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  50624925 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacata 50624982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 2859638 - 2859686
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    |||||| | |||||||||||||| |||| ||||||||||| ||||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 3169843 - 3169787
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  3169843 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgccc 3169787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 9499322 - 9499259
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||||||| ||||||||| || |||| ||| ||||||| ||| |||||||| |||||||    
T  9499322 atcgtggttgagtcgaacacaaccccacaaaaccgg-ttgtgaggtgaagattgcccctacttat 9499259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 31432237 - 31432293
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||| ||||||| || |||| ||||||||||| ||||||||||||    
T  31432237 atcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggattgccc 31432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 31496378 - 31496418
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgt 260  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  31496378 atcgtgattgagtctaacacaaccccataaaaccggcttgt 31496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 33156810 - 33156754
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33156810 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33156754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 35772106 - 35772050
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||    
T  35772106 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgccc 35772050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 52907461 - 52907405
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| |||| |||||||| || |||| | ||||||||| ||||||||||||    
T  52907461 atcgtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgccc 52907405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 335
Target Start/End: Original strand, 11211686 - 11211796
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | | ||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    |||||||||||||||||||||     
T  11211686 atcgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc-acttataaagacatt----gttaggccatctcttatccgac 11211780  T
Q  320 gtgggactctttaaca 335  Q
    ||||||||||||||||    
T  11211781 gtgggactctttaaca 11211796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 42985134 - 42985185
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 275  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  42985134 tggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcc 42985185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 26028972 - 26029022
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 274  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattgc 26029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 19476553 - 19476610
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| |||||||||||||| ||||||||||| | ||||||| |||||||||||    
T  19476553 ccctataatattcattttagtactcattttgagggactaaaatcaaatattctacata 19476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 36277233 - 36277339
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |||| ||||||    
T  36277233 atcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcttgtccgat 36277328  T
Q  320 gtgggactctt 330  Q
    ||| |||||||    
T  36277329 gtgagactctt 36277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 48661562 - 48661668
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| ||||||||||| |||| |||| ||||||||||| ||||||||||||  || ||| || ||||    ||| ||| |||||| |||| |||    
T  48661562 atcgtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacctataaatacat----tgtcaggtcatctcctatctgat 48661657  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  48661658 gtgggactctt 48661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 23796034 - 23796086
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||| |||||||| || ||||||||||||||||||| ||||||||||||    
T  23796034 tggttgagcctaacacatccccataaaatcggcttgtgaggtgaggattgccc 23796086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 1596902 - 1596799
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | |||||||||||  | |||| |||||||| || ||||||||||||  |||||| |||||||    ||||||||||| || | |||||||||    
T  1596902 gtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaaacat----tgttaggccatgtcctgtccgatgtg 1596807  T
Q  323 ggactctt 330  Q
    ||||||||    
T  1596806 ggactctt 1596799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 22574921 - 22574840
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||| ||| |||||||||| | ||||||||| |||| |||  ||||||||||| ||||||||||||| |||||| ||||||||    
T  22574921 ctcttagaaatcgtggttgggcctaacacaaactcacaaatacggcttgtgaggtgaggattgccctcacttat-aaaacatt 22574840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 3038095 - 3038197
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 323  Q
    |||||| | ||||||||||| || |||| ||||||||||  ||||||||||||  |||||| || ||||    |||||| | ||||||||| ||||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacat----tgttagacaatctcttattcgatgtgg 3038190  T
Q  324 gactctt 330  Q
    |||||||    
T  3038191 gactctt 3038197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 17202256 - 17202150
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||| |||||||  |||||| || | ||    ||| |||||| |||||| |||||    
T  17202256 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaacaaat----tgtcaggccaactcttaaccgat 17202161  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  17202160 gtgggactctt 17202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 21054963 - 21055066
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| |||||||| | |||||||| ||    
T  21054963 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttat--aaacatat--tgtcaggccatcacctatccgatatg 21055058  T
Q  323 ggactctt 330  Q
    ||||||||    
T  21055059 ggactctt 21055066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 25620213 - 25620140
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  25620213 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 25620140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 29469682 - 29469576
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469682 atcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469587  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  29469586 gtgggactctt 29469576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 40746339 - 40746278
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||| ||||||    
T  40746339 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccctcacttat 40746278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 42517026 - 42517083
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  42517026 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 42517083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 48243068 - 48243141
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  48243068 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 48243141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 24432196 - 24432148
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 271  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||    
T  24432196 gtggttgagtctaatacaacctcacaaaatcagcttgtgagatgaggat 24432148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 34027470 - 34027414
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  34027470 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 34027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 6782938 - 6782883
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 275  Q
    |||||||||||| ||||||||||| || |||| |||||||| || |||||||||||    
T  6782938 atcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 6782883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 34487303 - 34487358
Alignment:
Q  76 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  34487303 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 34487358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 36206070 - 36206125
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 275  Q
    |||||||||||| |||| |||||| ||||||| ||||||||||| ||| |||||||    
T  36206070 atcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcc 36206125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 4507009 - 4506955
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 274  Q
    ||||| |||| ||||||||||||| ||||||| || |||||||| ||||||||||    
T  4507009 atcgtagttgggtctaacacaaccccataaaaccgacttgtgaggtgaggattgc 4506955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 21861368 - 21861265
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||| | || |||| |||||||| || ||||||||||||| |||||| || ||||    ||| ||||||| || | |||||||||    
T  21861368 gtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacat----tgtcaggccatgtcctgtccgatgtg 21861273  T
Q  323 ggactctt 330  Q
    ||||||||    
T  21861272 ggactctt 21861265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 21861603 - 21861533
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    ||||||| | ||||||||||| || ||||||||||||| || ||||||||||||  |||||| || |||||    
T  21861603 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacacatt 21861533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 23177209 - 23177263
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| ||||||||||| |||||||| ||||| | ||||||| |||||||||||    
T  23177209 tataatattcattttagtccttattttaagggattaaaatcaaatattctacata 23177263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 47710517 - 47710414
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47710517 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47710422  T
Q  323 ggactctt 330  Q
     |||||||    
T  47710421 agactctt 47710414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 47722173 - 47722070
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47722173 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47722078  T
Q  323 ggactctt 330  Q
     |||||||    
T  47722077 agactctt 47722070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 24580 - 24523
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  24580 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 24523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 13426516 - 13426455
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatactac 135  Q
    ||||||||| ||||||||||| || ||||||||||  | ||||||| ||||||||| |||||    
T  13426516 ccctataatattcattttagtcctcattttgaggggctaaaatcaaatattctacacactac 13426455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 19157852 - 19157909
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  19157852 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacata 19157909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 20757251 - 20757308
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  20757251 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacata 20757308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 21822117 - 21822064
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||| ||||||||||| | || |||||| ||||||||| ||||||||||||    
T  21822117 gtggttgggtctaacacaaacccacaaaatctgcttgtgagatgaggattgccc 21822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 29469917 - 29469811
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||  || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469917 atcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469822  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  29469821 gtgggactctt 29469811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 31579655 - 31579598
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||| | | ||||||| |||||||||||    
T  31579655 ccctataatattcattttagtcctcattttgaggtactaaaatcaaatattctacata 31579598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 33996318 - 33996424
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||  || |||| || |||||||| ||| ||||||||  |||||| || ||||| |    |||||||| || ||||||||    
T  33996318 atcgtggttgggcctaacacaactccacaaaaccgacttgtgaggtgaagattgcccccacttataaatacattat----taggccatgtcctatccgat 33996413  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  33996414 gtgggactctt 33996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 40729222 - 40729279
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||    
T  40729222 ccctataatattcattttagttctcattttgagggactaaaattaaatattctacata 40729279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 40991754 - 40991803
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    |||||||||||||||||||||||| |||| | | ||||||| ||||||||    
T  40991754 gtggttgagtctaacacaacctcacaaaaccagattgtgagatgaggatt 40991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 48243448 - 48243517
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||| ||||||||||||| || |||| |||||||| || ||||||||||||  |||||| || |||||    
T  48243448 tggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacatt 48243517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 2544454 - 2544510
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| || |||||||| ||||||||||||    
T  2544454 atcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 2544510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 4886406 - 4886350
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | |||||||||||||   ||| ||||||||||| ||||||||||||    
T  4886406 atcgtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgccc 4886350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 10903162 - 10903098
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| |||||||| ||| |||||||    
T  10903162 atcgtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggattacccctacttat 10903098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 21311415 - 21311455
Alignment:
Q  232 tctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  21311415 tctaacacaacctcataaaatcgatttgtgagatgaggatt 21311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 22364875 - 22364820
Alignment:
Q  75 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  22364875 cctataatattcattttagtcct-attttgagggactaaaatcaaatattctacata 22364820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 31257038 - 31257094
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||||||||||||||| || ||||  || ||||||| ||| ||||||||    
T  31257038 atcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgccc 31257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 31485679 - 31485739
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| ||| |||| |||||||| || ||||||||||||  |||||| ||||||||    
T  31485679 ctaacacaacttcacaaaaccggcttgtcaggtgaggattgcccccacttataaaaacatt 31485739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 330
Target Start/End: Complemental strand, 9705340 - 9705225
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 310  Q
    |||| ||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||||| ||||| ||    
T  9705340 ctcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgttaagccatgtc 9705245  T
Q  311 ttatccgatgtgggactctt 330  Q
     |||||||||||||||||||    
T  9705244 ctatccgatgtgggactctt 9705225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 12329951 - 12330057
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||  |||||| || ||||    |||||   ||| |||||||||||    
T  12329951 atcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacat----tgttatatcatatcttatccgat 12330046  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  12330047 gtgggactctt 12330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 21690799 - 21690743
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||    
T  21690799 atcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccc 21690743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 330
Target Start/End: Complemental strand, 6054489 - 6054374
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 310  Q
    |||| ||| |||||||||| |||||||||||||  | |||||||| ||||||| ||||||||||||  |||||| || || |    ||| || |||||||    
T  6054489 ctcttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaatacct----tgtcagaccatctc 6054394  T
Q  311 ttatccgatgtgggactctt 330  Q
    ||||||||||| ||||||||    
T  6054393 ttatccgatgttggactctt 6054374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 4868584 - 4868690
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  4868584 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 4868679  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  4868680 gtgggactctt 4868690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 6542950 - 6543056
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||  |||||| || ||||    ||| || ||||||||||||||||    
T  6542950 atcgtggttgggtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaacacat----tgtcagaccatctcttatccgat 6543045  T
Q  320 gtgggactctt 330  Q
    |||| ||||||    
T  6543046 gtggaactctt 6543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 12330298 - 12330403
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| || ||||||||    
T  12330298 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgccc-cacttataaacacat----tgtcagaccatgtcctatccgat 12330392  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  12330393 gtgggactctt 12330403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 25065101 - 25065207
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| |||||||||||| |||||||  |||||| |  ||| || |||| || ||||||||    
T  25065101 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttat--aaacatat--tgtcagaccatgtcctatccgat 25065196  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  25065197 gtgggactctt 25065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 33494613 - 33494510
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||||    | | |||||||| |||||||||||    
T  33494613 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattt----tcaagccatctcctatccgatgtg 33494518  T
Q  323 ggactctt 330  Q
    ||||||||    
T  33494517 ggactctt 33494510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 3484943 - 3485000
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  3484943 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 3485000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 4868820 - 4868893
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  4868820 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 4868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 5404729 - 5404786
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  5404729 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 5404786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 12330186 - 12330259
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||| ||||||  |||||| || |||||    
T  12330186 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacacatt 12330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 30256889 - 30256779
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| ||| |||| | ||||||||    
T  30256889 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc-cacttat--aaacatat--tgtcaggtcatcacctatccgat 30256795  T
Q  320 gtgggactctttaaca 335  Q
    ||||||||||| ||||    
T  30256794 gtgggactcttaaaca 30256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 33783621 - 33783560
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatactac 135  Q
    ||||||||| ||| ||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  33783621 ccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacatactac 33783560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 6237715 - 6237815
Alignment:
Q  221 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 320  Q
    ||||| ||||||||||||||||||||      ||||||||||| ||||||||||||| |||||| || ||||    ||| ||||| || ||||||| |||    
T  6237715 tcgtgattgagtctaacacaacctcac-----cggcttgtgaggtgaggattgccctcacttataaatacat----tgtcaggccttcacttatccaatg 6237805  T
Q  321 tgggactctt 330  Q
    ||||||||||    
T  6237806 tgggactctt 6237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 8026466 - 8026410
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026466 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 8026681 - 8026625
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026681 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 4906872 - 4906810
Alignment:
Q  231 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    ||||||||||| | |||||||  |||||||||| ||||||||||||| |||||| || |||||    
T  4906872 gtctaacacaatcccataaaactggcttgtgagatgaggattgccctcacttataaacacatt 4906810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 13353275 - 13353172
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  13353275 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 13353180  T
Q  323 ggactctt 330  Q
    ||||||||    
T  13353179 ggactctt 13353172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 28853647 - 28853701
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  28853647 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 28853701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 33796400 - 33796297
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  33796400 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 33796305  T
Q  323 ggactctt 330  Q
    ||||||||    
T  33796304 ggactctt 33796297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 7915926 - 7915872
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| ||||||||  ||| || |||||||||||||||| ||||||||||||    
T  7915926 atcgtggttgggtctaaca--accccacaaaatcggcttgtgaggtgaggattgccc 7915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 8926346 - 8926403
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || |||||||| || | ||||||| |||||||||||    
T  8926346 ccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacata 8926403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 17238197 - 17238250
Alignment:
Q  78 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  17238197 ataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 17238250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 19661573 - 19661516
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| |||||||||||  | ||||||||||| | ||||||| |||||||||||    
T  19661573 ccctataatattcattttagtcttcattttgagggactaaaatcaaatattctacata 19661516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 20830820 - 20830771
Alignment:
Q  227 ttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||||||||||| |||||| | ||||||| ||| ||||||||    
T  20830820 ttgagtctaacacaacctcacaaaatcagtttgtgaggtgatgattgccc 20830771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 29819545 - 29819602
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||    
T  29819545 ccctataatattcattttagtcctcattttgagggactaaaattaaatattctacata 29819602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 30609090 - 30609033
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  30609090 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 30609033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 4601117 - 4601169
Alignment:
Q  79 taatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||| |||||||||||  ||||||||||||| | ||||||| |||||||||||    
T  4601117 taatattcattttagtctttattttgagggactaaaatcaaatattctacata 4601169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 5648692 - 5648752
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||||||| |||| ||||||||||| ||| ||||| ||||| |||| || |||||    
T  5648692 ctaacacaacctcacaaaaccggcttgtgaggtgatgattgtccttaattataaacacatt 5648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 11721982 - 11721926
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  11721982 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 11721926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 16525341 - 16525409
Alignment:
Q  63 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| | | |||||||  |||||||||| || ||||||||||| | ||||||| |||||||||||    
T  16525341 ttgaaattgatctctataatactcattttagtcctcattttgagggactaaaatcaaatattctacata 16525409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 330
Target Start/End: Original strand, 17147680 - 17147773
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| || |||||||||||||||||||    
T  17147680 ctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggtcatgtcctatccgatgtgggactctt 17147773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 20373647 - 20373584
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||| | ||||||    
T  20373647 atcgtggttgggcctaacacaaccccacaaaat-ggcttgtgaggtgaggattgccatcacttat 20373584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 30256655 - 30256599
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  30256655 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgccc 30256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 54368593 - 54368487
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || |||||||     |||||||||  |||| |||    
T  54368593 atcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattttc----aggccatcttctatcggat 54368498  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  54368497 gtgggactctt 54368487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 335
Target Start/End: Original strand, 45138978 - 45139089
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| |||| |||||||| || |||| ||||||||||| ||||||||||||  |||||| || || |    ||| ||||||||||||||| |||    
T  45138978 atcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttattaacacgt----tgtcaggccatctcttatcagat 45139073  T
Q  320 gtgggactctttaaca 335  Q
    |||||||| |||||||    
T  45139074 gtgggactatttaaca 45139089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 16056507 - 16056564
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||    
T  16056507 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacata 16056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 20327621 - 20327727
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20327621 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcctatccgat 20327716  T
Q  320 gtgggactctt 330  Q
    |||||| ||||    
T  20327717 gtgggattctt 20327727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 35038201 - 35038307
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| |||||||| | ||||||||    
T  35038201 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat----tgtcaggccatcacctatccgat 35038296  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  35038297 gtgggactctt 35038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 46962817 - 46962749
Alignment:
Q  63 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  46962817 ttgaaattgatccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 46962749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 335
Target Start/End: Original strand, 45138800 - 45138920
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 310  Q
    |||| ||| |||||||||| |||| | |||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||  || |||||||    
T  45138800 ctctaagaaatcgtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgccagaccatctc 45138895  T
Q  311 ttatccgatgtgggactctttaaca 335  Q
    ||||||||||||||||  |||||||    
T  45138896 ttatccgatgtgggacaatttaaca 45138920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 38791460 - 38791563
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||||||  ||||||| ||||||||| ||| |||||| || ||||    ||| || ||||||| |||||||||||    
T  38791460 gtggttgggcctaacacaaccccacaaaatcgatttgtgaggtgaggattgtcctcacttataaatacat----tgtcagaccatctcctatccgatgtg 38791555  T
Q  323 ggactctt 330  Q
    ||||||||    
T  38791556 ggactctt 38791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 16926956 - 16927062
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||||||||||  |||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |  ||||||||    
T  16926956 atcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacat----tgtcaggccatgttctatccgat 16927051  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  16927052 gtgggactctt 16927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 20303071 - 20303177
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| ||||||||| | || |||| ||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20303071 atcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 20303166  T
Q  320 gtgggactctt 330  Q
    |||||| ||||    
T  20303167 gtgggattctt 20303177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 329
Target Start/End: Complemental strand, 22729174 - 22729072
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  22729174 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 22729079  T
Q  323 ggactct 329  Q
    |||||||    
T  22729078 ggactct 22729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 26582836 - 26582779
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  26582836 ccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacata 26582779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 27934610 - 27934667
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  27934610 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 27934667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 32315600 - 32315543
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  32315600 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 32315543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 52835704 - 52835761
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  52835704 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 52835761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 1723083 - 1723139
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  1723083 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 1723139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 11589862 - 11589806
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  11589862 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 11589806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 31317305 - 31317249
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||| ||||||||| | || |||| ||||||||||| ||||||||||||    
T  31317305 atcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattgccc 31317249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 35038436 - 35038541
Alignment:
Q  221 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 320  Q
    ||||||||| | ||||||||||| || |||| | |||||| || ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||    
T  35038436 tcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatg 35038531  T
Q  321 tgggactctt 330  Q
    ||||||||||    
T  35038532 tgggactctt 35038541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 24866274 - 24866219
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 275  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||    
T  24866274 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcc 24866219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 276
Target Start/End: Complemental strand, 45828083 - 45828040
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||    
T  45828083 ctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 45828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 33162541 - 33162487
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  33162541 tataatattcattttagtcctcattttgagggattaaaatcaaatattctacata 33162487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 34610648 - 34610582
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||| ||| || ||||||| ||||||||||||| || |||| || |||||||| ||||||||||||    
T  34610648 actcttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 34610582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 13741111 - 13741160
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    ||||||| ||||||||||||| || |||| ||||||||||| ||||||||    
T  13741111 gtggttgggtctaacacaaccccaaaaaaccggcttgtgaggtgaggatt 13741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 14546060 - 14546003
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| || ||||||||    
T  14546060 ccctataatattcattttagttctcattttgagggactaaaatcaaatactctacata 14546003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 16239668 - 16239562
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||| | || |||| ||||||||||| ||||| ||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  16239668 atcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacacat----tgtcaggccatgtcctatccgat 16239573  T
Q  320 gtgggactctt 330  Q
    ||| |||||||    
T  16239572 gtgagactctt 16239562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 20327860 - 20327962
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 323  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgatgtgg 20327955  T
Q  324 gactctt 330  Q
    |||||||    
T  20327956 gactctt 20327962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 29838518 - 29838461
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  29838518 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 29838461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 49121875 - 49121932
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| |||| |||||| || ||||||||||| | ||||||| |||||||||||    
T  49121875 ccctataatattcactttagtcctcattttgagggactaaaatcaaatattctacata 49121932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 49500002 - 49500059
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  49500002 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 49500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 50645631 - 50645688
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  50645631 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 50645688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 54567969 - 54567896
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  54567969 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 54567896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 4155401 - 4155345
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  4155401 atcgtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgccc 4155345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 6487340 - 6487392
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    |||||||||| | |||| |||||| ||||||| ||||||||||| ||||||||    
T  6487340 atcgtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggatt 6487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 33205542 - 33205482
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttac 280  Q
    |||||||||| | ||||||||||| |  ||||  |||||||||| ||||||||||||||||    
T  33205542 atcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgcccttac 33205482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 50052546 - 50052602
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||  ||||||||||||    
T  50052546 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgccc 50052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 336
Target Start/End: Complemental strand, 50930768 - 50930667
Alignment:
Q  231 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    |||| |||||||| || |||| ||  ||||||| ||||||||||||  |||||| || |||| |||    ||||||||| ||||| ||||||||| ||||    
T  50930768 gtcttacacaaccccacaaaaccgttttgtgaggtgaggattgcccccacttataaacacatgtta----aggccatcttttatcagatgtgggagtctt 50930673  T
Q  331 taacag 336  Q
    ||||||    
T  50930672 taacag 50930667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 330
Target Start/End: Complemental strand, 6361 - 6245
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || ||||    ||| || | ||||    
T  6361 actctaagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagactatct 6266  T
Q  310 cttatccgatgtgggactctt 330  Q
    |||||| ||||||||||||||    
T  6265 cttatctgatgtgggactctt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 336
Target Start/End: Original strand, 38447447 - 38447546
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttta 332  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||||||||||||| ||||||| ||||||    
T  38447447 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatctcttatccgttgtgggattcttta 38447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 22638186 - 22638295
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| |  |||||||||| || |||| ||||||||| | |||||||||||| |||||||  ||||| ||  ||  |||||||||||||||||||    
T  22638186 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttat--aaacactt--tgacaggccatctcttatccgat 22638281  T
Q  320 gtgggactctttaa 333  Q
    ||| ||||||||||    
T  22638282 gtgagactctttaa 22638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 15042677 - 15042783
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| ||||||||||| || |||||||| ||| ||| ||| ||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  15042677 atcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaacacat----tgtcaggccatgtcgtatccgat 15042772  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  15042773 gtgggactctt 15042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 17469895 - 17469789
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17469895 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17469800  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  17469799 gtgggactctt 17469789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 17477142 - 17477036
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17477142 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17477047  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  17477046 gtgggactctt 17477036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 24532432 - 24532534
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 323  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| |||||||||| ||||||||||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggccatctcctatccgatgtgg 24532527  T
Q  324 gactctt 330  Q
    |||||||    
T  24532528 gactctt 24532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 39052936 - 39053042
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  39052936 atcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 39053031  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  39053032 gtgggactctt 39053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 39743606 - 39743500
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  39743606 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaacaaat----tgtcaggccaactcctaaccgat 39743511  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  39743510 gtgggactctt 39743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 20702874 - 20702818
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||| |||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  20702874 atcgtgattgagtctaacacaacctcacaaaaccggcttatgagatgaggattgccc 20702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 330
Target Start/End: Complemental strand, 39960279 - 39960162
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatc 308  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || | ||||    | ||||||||    
T  39960279 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccccacttataaacaaattt----tcaggccatc 39960184  T
Q  309 tcttatccgatgtgggactctt 330  Q
    || |||||||||||||||||||    
T  39960183 tcctatccgatgtgggactctt 39960162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 330
Target Start/End: Complemental strand, 10450087 - 10449971
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| |||||||||||| |||||||||||  | |||| |||||| |||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  10450087 actcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgcccacacttataaacacat----tgtcaggccatgt 10449992  T
Q  310 cttatccgatgtgggactctt 330  Q
    | ||||||||||| |||||||    
T  10449991 cctatccgatgtgagactctt 10449971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 8716187 - 8716080
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 323  Q
    |||||| ||||||||||||| || ||||||||||| |||| ||||||||||| | |||| | || ||||    ||| || |||||||||||||||| ||     
T  8716187 tggttgggtctaacacaaccccacaaaatcggcttatgaggtgaggattgccttcacttttaaacacat----tgtgagaccatctcttatccgatatga 8716092  T
Q  324 gactctttaaca 335  Q
    || |||||||||    
T  8716091 gattctttaaca 8716080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 34843194 - 34843140
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 274  Q
    ||||||||| |||||||||||||| || |||| ||||||||||| ||||||||||    
T  34843194 atcgtggttcagtctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 34843140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 3272879 - 3272936
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  3272879 ccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacata 3272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 4828149 - 4828092
Alignment:
Q  216 agagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    |||||||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  4828149 agagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 4828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 329
Target Start/End: Original strand, 5590378 - 5590480
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  5590378 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 5590473  T
Q  323 ggactct 329  Q
    |||||||    
T  5590474 ggactct 5590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 13154398 - 13154455
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  13154398 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 13154455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 18939307 - 18939360
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||    
T  18939307 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgccc 18939360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 19256593 - 19256699
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256593 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256688  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  19256689 gtgggactctt 19256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 24332421 - 24332478
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  24332421 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 24332478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 26479518 - 26479461
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  26479518 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 26479461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 28069364 - 28069470
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||||||||  |||||||||||  || |||||| | ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  28069364 atcgtggttggatctaacacaactccacaaaatcagtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 28069459  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  28069460 gtgggactctt 28069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 29005941 - 29005888
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    |||||||||| |||||||||||||||||||| ||||||| |||  |||||||||    
T  29005941 atcgtggttgggtctaacacaacctcataaattcggcttatgaagtgaggattg 29005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 31403137 - 31403080
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  31403137 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 31403080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 42846612 - 42846669
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 277  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||||    
T  42846612 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccct 42846669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 24075313 - 24075369
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  24075313 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 24075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 27993501 - 27993445
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacat 130  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||| ||||||||||    
T  27993501 ccctataatatttattttagttcttattttgagggactaaaatcaaatattctacat 27993445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 28050803 - 28050747
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacat 130  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||| ||||||||||    
T  28050803 ccctataatatttattttagttcttattttgagggactaaaatcaaatattctacat 28050747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 335
Target Start/End: Original strand, 30201610 - 30201642
Alignment:
Q  303 gccatctcttatccgatgtgggactctttaaca 335  Q
    |||||||||||||||||||||||||||||||||    
T  30201610 gccatctcttatccgatgtgggactctttaaca 30201642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 335
Target Start/End: Complemental strand, 4828367 - 4828259
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| | |||| ||| || ||||||||    
T  4828367 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcatgccaactcctaaccgatgtg 4828272  T
Q  323 ggactctttaaca 335  Q
    |||||||||||||    
T  4828271 ggactctttaaca 4828259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 333
Target Start/End: Complemental strand, 37001303 - 37001194
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  || |||  ||||| ||  ||| |||||||||||  | ||||    
T  37001303 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacctat--aaacactt--tgtgaggccatctctcgttcgat 37001208  T
Q  320 gtgggactctttaa 333  Q
    ||||||||||||||    
T  37001207 gtgggactctttaa 37001194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 11232204 - 11232307
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  11232204 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 11232299  T
Q  323 ggactctt 330  Q
    ||||||||    
T  11232300 ggactctt 11232307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 31186535 - 31186589
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  31186535 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 31186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 3157569 - 3157622
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||||| ||||||||||| || ||||  |||||||||| ||||||||||||    
T  3157569 gtggttgagcctaacacaaccccacaaaactggcttgtgaggtgaggattgccc 3157622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 8466810 - 8466843
Alignment:
Q  303 gccatctcttatccgatgtgggactctttaacag 336  Q
    |||||||||||||||||||| |||||||||||||    
T  8466810 gccatctcttatccgatgtgagactctttaacag 8466843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 12688149 - 12688076
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||| |||||||||||| |||  || |||| ||||||||||| || |||||||||| |||||| || |||||    
T  12688149 atcgtgtttgagtctaacataactccacaaaaccggcttgtgaggtggggattgccctcacttataaacacatt 12688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 19256827 - 19256933
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256827 atcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256922  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  19256923 gtgggactctt 19256933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 20301338 - 20301265
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  20301338 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 20301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 21087970 - 21087897
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  21087970 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 21087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 27205246 - 27205181
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||| ||| |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205246 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 29907815 - 29907844
Alignment:
Q  306 atctcttatccgatgtgggactctttaaca 335  Q
    ||||||||||||||||||||||||||||||    
T  29907815 atctcttatccgatgtgggactctttaaca 29907844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 31685829 - 31685886
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  31685829 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 31685886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 35682788 - 35682861
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||  |||||| || |||||    
T  35682788 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacatt 35682861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 10614946 - 10614998
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    |||||||||||| |||| |||||| || |||||||||||||||| ||| ||||    
T  10614946 atcgtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagatt 10614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 10884141 - 10884086
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  10884141 atcgtggttgggcctaacacaacc-cacaaaaccggcttgtgaggtgaggattgccc 10884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 15686047 - 15686095
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgag 268  Q
    |||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  15686047 atcgtggttgagtctaacacaatcccacaaaaccggcttgtgaggtgag 15686095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 27205041 - 27204985
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205041 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 27205139 - 27205083
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205139 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 24346511 - 24346614
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24346511 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 24346606  T
Q  323 ggactctt 330  Q
    ||||||||    
T  24346607 ggactctt 24346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 7133273 - 7133341
Alignment:
Q  63 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||||||| ||||||| |||||||||||    
T  7133273 ttgaaattgatccctataatattcattttagtcctcattttgagggagtaaaatcaaatattctacata 7133341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 1564574 - 1564686
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| ||||||||||| || ||||  | |||||||  ||||||||||||  |||||| |  |||||    || || ||||||||||||||||    
T  1564574 atcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataatcacatt----gtcagaccatctcttatccgat 1564669  T
Q  320 gtgggactctttaacag 336  Q
    |||||||||||||||||    
T  1564670 gtgggactctttaacag 1564686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 330
Target Start/End: Original strand, 41666754 - 41666870
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  41666754 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgt 41666849  T
Q  310 cttatccgatgtgggactctt 330  Q
    | | |||||||||||||||||    
T  41666850 cctgtccgatgtgggactctt 41666870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 15438950 - 15438843
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 323  Q
    ||||||||||||||||||||  | |||||||||||||||| ||||||||||||  |||||| || ||||    | | || ||||||| |||||||||||     
T  15438950 tggttgagtctaacacaaccctagaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tatcagaccatctcatatccgatgtga 15438855  T
Q  324 gactctttaaca 335  Q
     |||||||||||    
T  15438854 aactctttaaca 15438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 24269881 - 24269983
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24269881 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattaccc-cacttataaacacat----tgtcaggccatgtcctatccgatgtg 24269975  T
Q  323 ggactctt 330  Q
    ||||||||    
T  24269976 ggactctt 24269983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 28510168 - 28510057
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||| | |||||| || ||||    ||| ||| ||||||||||| |||    
T  28510168 atcgtggttgggcctaacacaaccccacaaaaccggcttatgagatgaggattgccttcacttataaacacat----tgtcaggtcatctcttatctgat 28510073  T
Q  320 gtgggactctttaaca 335  Q
    || |||||||||||||    
T  28510072 gttggactctttaaca 28510057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 24346744 - 24346850
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| ||||||||||||| || |||| ||||||||||| |||| ||| |||  |||||| || ||||    ||| ||||||| |||||| ||||    
T  24346744 atcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacat----tgtcaggccatgtcttattcgat 24346839  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  24346840 gtgggactctt 24346850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 41667000 - 41667106
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  41667000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 41667095  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  41667096 gtgggactctt 41667106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 27133000 - 27133064
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  27133000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 27133064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 9187363 - 9187320
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgag 263  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  9187363 atcgtggttgagtctaacacaaccccacaaaatcggcttgtgag 9187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 17352445 - 17352547
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||||| ||||| |||||||| |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||| |||||||||| |||||||    
T  17352445 gtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggtcatctcttat-cgatgtg 17352539  T
Q  323 ggactctt 330  Q
    ||||||||    
T  17352540 ggactctt 17352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 6497351 - 6497408
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  6497351 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 6497408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 10461569 - 10461512
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  10461569 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 10461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 22394348 - 22394291
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  22394348 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 22394291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 24531676 - 24531603
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| |  |||||||||| || |||||||||||||||| ||||||||||||  |||||| || |||||    
T  24531676 atcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacatt 24531603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 29991261 - 29991322
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatactac 135  Q
    ||||||||| ||||||||||| || ||||| ||||| | ||||||| |||||||||||||||    
T  29991261 ccctataatattcattttagtcctcattttaagggactaaaatcaaatattctacatactac 29991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 335
Target Start/End: Complemental strand, 7369798 - 7369690
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgtt-aggccatctcttatccgatgt 321  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||| |||||  ||||||  ||||| ||   ||| | |||||||||||||| ||||    
T  7369798 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttat--aaacactt---gttcatgccatctcttatccaatgt 7369704  T
Q  322 gggactctttaaca 335  Q
    ||||||||||||||    
T  7369703 gggactctttaaca 7369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 17015890 - 17015950
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||| | ||||||||||| || |||||||||||||||| |||| |||||||| ||||||    
T  17015890 tggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgccctcacttat 17015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 19522397 - 19522341
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||  |||||||    
T  19522397 atcgtggttgtgtctaacacaaccccacaaaatcggcttgtgaggtgattattgccc 19522341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25258101 - 25258157
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25258101 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25258157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25258308 - 25258364
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25258308 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25321891 - 25321947
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25321891 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 25322098 - 25322154
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25322098 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25322154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 24491067 - 24491012
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctaca 129  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||    
T  24491067 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctaca 24491012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 38731623 - 38731674
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    ||||||||||||||||||||||||||||||| ||  |||||| || ||||||    
T  38731623 ctaacacaacctcataaaatcggcttgtgaggtggtgattgctctcacttat 38731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 6413444 - 6413506
Alignment:
Q  231 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    ||||||||||||| || ||||||||||| |||| ||||||||||||  |||||| || |||||    
T  6413444 gtctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaacacatt 6413506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 8081124 - 8081227
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  8081124 tggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 8081219  T
Q  323 ggactctt 330  Q
    ||||||||    
T  8081220 ggactctt 8081227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 9368904 - 9368801
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || | |||||||||||||  |||| |||||||  |||||| || |||||    || | |||||||| |||||||||||    
T  9368904 gtggttgggcctaacacaaccccacataatcggcttgtgaagtgagaattgcccccacttataaacacatt----gtcatgccatctcctatccgatgtg 9368809  T
Q  323 ggactctt 330  Q
    ||||||||    
T  9368808 ggactctt 9368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 18333475 - 18333578
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| || ||||||| |||||||||||    
T  18333475 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcagaccatctcctatccgatgtg 18333570  T
Q  323 ggactctt 330  Q
    ||| ||||    
T  18333571 ggattctt 18333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 38731848 - 38731898
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    ||||||| | |||||||||||||| ||||||| |||||||| |||||||||    
T  38731848 gtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattg 38731898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 14868832 - 14868889
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| || |||||||| || ||||||||||| | ||||||| |||||||||||    
T  14868832 ccctataatatttattttagtcctcattttgagggactaaaatcaaatattctacata 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 18786205 - 18786148
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||| |||||    
T  18786205 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattcgacata 18786148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 20225118 - 20225065
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    |||||||||||  ||||||||||| || ||||||| |||||||| |||||||||    
T  20225118 atcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattg 20225065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 21306964 - 21306891
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21306964 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21306891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 21314802 - 21314729
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21314802 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21314729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 24528613 - 24528544
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 24528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 41137300 - 41137357
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || |||||| |||| | ||||||| |||||||||||    
T  41137300 ccctataatattcattttagtcctcattttgggggactaaaatcaaatattctacata 41137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 43117959 - 43117902
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 277  Q
    ||||| |||| | |||||||||||  |||||| ||||||||||| |||||||||||||    
T  43117959 atcgttgttgggcctaacacaaccctataaaaccggcttgtgagatgaggattgccct 43117902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 8098394 - 8098338
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| |  |||||||||| || |||| ||||||||||| ||||||||||||    
T  8098394 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8098338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 19522164 - 19522108
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| ||| || |||||| || |||| ||||||||||| ||||||||||||    
T  19522164 atcgtggttgggtcaaatacaaccccacaaaaccggcttgtgaggtgaggattgccc 19522108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 24487652 - 24487704
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 272  Q
    |||||||||| |  ||||||||||||| |||| ||||||||||| ||||||||    
T  24487652 atcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggatt 24487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 33337462 - 33337518
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||  ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33337462 atcgtggttgaacctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 44118878 - 44118977
Alignment:
Q  232 tctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttt 331  Q
    |||||||||||| || ||||  |||||||||| |||||||| |||  |||||| || |||||    || |||||||||||||||||||||||||||||||    
T  44118878 tctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaacacatt----gtcaggccatctcttatccgatgtgggactcttt 44118973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 35788736 - 35788630
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||| |||    
T  35788736 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatctgat 35788641  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  35788640 gtgggactctt 35788630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 330
Target Start/End: Complemental strand, 35788980 - 35788865
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 310  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |     
T  35788980 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcaggccatgtt 35788885  T
Q  311 ttatccgatgtgggactctt 330  Q
     |||||||||||||||||||    
T  35788884 ctatccgatgtgggactctt 35788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 22827615 - 22827509
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | |||||||||||  | |||| ||||||||||| ||||||||||||  |||||| || || |    ||| |||||||||| ||||||||    
T  22827615 atcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacgt----tgtcaggccatctcctatccgat 22827520  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  22827519 gtgggactctt 22827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 9685709 - 9685653
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  9685709 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgccc 9685653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 12005476 - 12005532
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  12005476 atcgttgttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 12005532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 330
Target Start/End: Original strand, 22845444 - 22845560
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |    
T  22845444 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgt 22845539  T
Q  310 cttatccgatgtgggactctt 330  Q
    | |||| ||||||||||||||    
T  22845540 catatctgatgtgggactctt 22845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 26314696 - 26314638
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatactac 135  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  26314696 tataatattcattttagttctcattttgagggactaaaatcaaatattctacatactac 26314638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 330
Target Start/End: Original strand, 39902573 - 39902676
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  39902573 gtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 39902668  T
Q  323 ggactctt 330  Q
    ||||||||    
T  39902669 ggactctt 39902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 53699093 - 53698993
Alignment:
Q  231 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    ||||||||||||| |||||| |||| ||||||| ||||||||||||  ||||||  |||||| |  ||| ||  |||||||||| || ||||||||||||    
T  53699093 gtctaacacaaccccataaagtcggtttgtgaggtgaggattgcccacacttat--aaacatat--tgtcagatcatctcttattcgttgtgggactctt 53698998  T
Q  331 taaca 335  Q
    |||||    
T  53698997 taaca 53698993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 989299 - 989242
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  989299 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 989242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 6218516 - 6218410
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| |||||||||   ||||||| ||||||||||| ||| ||||||||  |||||| || ||||    ||||||| |||||| |||| |||    
T  6218516 atcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgttaggtcatctcctatctgat 6218421  T
Q  320 gtgggactctt 330  Q
    ||| |||||||    
T  6218420 gtgagactctt 6218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 11021832 - 11021889
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  11021832 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 11021889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 13683163 - 13683220
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  13683163 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 13683220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 17107591 - 17107648
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  17107591 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 17107648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 21498872 - 21498766
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498872 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498777  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  21498776 gtgggactctt 21498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 22487379 - 22487436
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  22487379 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 22487436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 28245533 - 28245639
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  28245533 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 28245628  T
Q  320 gtgggactctt 330  Q
    ||| |||||||    
T  28245629 gtgagactctt 28245639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 46081598 - 46081541
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  46081598 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 46081541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 46481076 - 46481133
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  46481076 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 46481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 50543574 - 50543680
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||| | ||||||||    
T  50543574 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttatacacacat----tgtcaggccatcacctatccgat 50543669  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  50543670 gtgggactctt 50543680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 1518241 - 1518185
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||  | ||||||||||| || |||| ||||||||||||||||||||||||    
T  1518241 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgccc 1518185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 22231315 - 22231371
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  22231315 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 22231371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 335
Target Start/End: Original strand, 27464272 - 27464366
Alignment:
Q  237 cacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctttaaca 335  Q
    ||||||| || |||| ||||||||||| |||||||||||   ||||||  ||||| |||  || |||  ||||||||||||||||||||||||||||||    
T  27464272 cacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttat--aaacacttt--gtcaggaaatctcttatccgatgtgggactctttaaca 27464366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 53559297 - 53559353
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || ||||||||||||| || ||||||||||||    
T  53559297 atcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgccc 53559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 35796763 - 35796822
Alignment:
Q  234 taacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  35796763 taacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 35796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 400575 - 400645
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||  ||||||||||||| |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  400575 gtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 400645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 5398221 - 5398275
Alignment:
Q  222 cgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  5398221 cgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccc 5398275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 12792794 - 12792740
Alignment:
Q  76 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacat 130  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||    
T  12792794 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctacat 12792740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 22863560 - 22863478
Alignment:
Q  211 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||  |||||| || |||||    
T  22863560 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacatt 22863478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 28208414 - 28208452
Alignment:
Q  297 tgttaggccatctcttatccgatgtgggactctttaaca 335  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  28208414 tgttagaccatctcttatccaatgtgggactctttaaca 28208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 5721111 - 5721168
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||    
T  5721111 ccctataatattcattttagtcctcattttgagggactaaaataaaatattctacata 5721168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 9685475 - 9685422
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    |||||||||| | |||||||||||||| |||| || |||||||| |||||||||    
T  9685475 atcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattg 9685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 13493108 - 13493051
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||||| |||| |||| || ||||||||||| | ||||||| |||||||||||    
T  13493108 ccctataatgtacattgtagtcctcattttgagggactaaaatcaaatattctacata 13493051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 16491806 - 16491863
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| || ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  16491806 ccctatgatattcattttagtcctcattttgagggattaaaatcaaatattctacata 16491863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 16959988 - 16959931
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  16959988 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 16959931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 17865135 - 17865192
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  17865135 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 17865192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 21498431 - 21498325
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498431 atcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498336  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  21498335 gtgggactctt 21498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 27634116 - 27634194
Alignment:
Q  248 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    |||||||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||||||||||    
T  27634116 aaaatcggtttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtgggactctt 27634194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 37815500 - 37815557
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||    
T  37815500 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacata 37815557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 39385385 - 39385328
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||    
T  39385385 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacata 39385328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 43750106 - 43750163
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||    
T  43750106 ccctataatattcattttagtcctcattttgagggactaaaataaaatattctacata 43750163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 53828533 - 53828586
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||    
T  53828533 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccc 53828586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 5846223 - 5846167
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||| ||||| ||||| || |||| |||||| |||| ||||||||||||    
T  5846223 atcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgccc 5846167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 11036766 - 11036826
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    ||||||||||| || | |||||||||||||| ||||||||||||  |||||| || |||||    
T  11036766 ctaacacaaccccacacaatcggcttgtgaggtgaggattgcccccacttataaacacatt 11036826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 14783194 - 14783250
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  14783194 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 14783250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 30529937 - 30529981
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgag 268  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  30529937 tggttgagcctaacacaatctcataaaaccggcttgtgaggtgag 30529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 35819135 - 35819191
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | |||||||||||||| ||||  ||||||||||  |||||||||||    
T  35819135 atcgtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgccc 35819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 330
Target Start/End: Complemental strand, 37836144 - 37836051
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    ||||||||||| || |||| |||||||| ||  |||||||||||  |||||| || |||||    |||||||||| || | |||||||||||||||||    
T  37836144 ctaacacaaccccacaaaaccggcttgtaaggagaggattgcccccacttataaatacatt----gttaggccatgtcctgtccgatgtgggactctt 37836051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 50543337 - 50543393
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||    
T  50543337 atcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgccc 50543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 330
Target Start/End: Complemental strand, 16419589 - 16419473
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| |    
T  16419589 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagaccatgt 16419494  T
Q  310 cttatccgatgtgggactctt 330  Q
    | |||||||||||||||||||    
T  16419493 cctatccgatgtgggactctt 16419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 330
Target Start/End: Original strand, 40379206 - 40379322
Alignment:
Q  210 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 309  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| ||||||||     
T  40379206 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatca 40379301  T
Q  310 cttatccgatgtgggactctt 330  Q
    | |||||||||||||||||||    
T  40379302 cctatccgatgtgggactctt 40379322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 17457942 - 17457885
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||    
T  17457942 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacata 17457885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 18369237 - 18369180
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||    
T  18369237 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacata 18369180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 40379451 - 40379557
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| |||||||| | ||||||||    
T  40379451 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatcacctatccgat 40379546  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  40379547 gtgggactctt 40379557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 2324551 - 2324495
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324551 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 17854936 - 17855000
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||| ||||| ||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  17854936 atcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 17855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 27897513 - 27897561
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 271  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  27897513 gtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 33940901 - 33940841
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatacta 134  Q
    ||||||||| |||||||||||  ||||||||||||| | ||||||| ||||||||||||||    
T  33940901 ccctataatattcattttagtctttattttgagggactaaaatcaaatattctacatacta 33940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 3371461 - 3371518
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  3371461 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 3371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 5711446 - 5711552
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  5711446 atcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacat----tgtcaggccatttcctttccgat 5711541  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  5711542 gtgggactctt 5711552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 12806708 - 12806765
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  12806708 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 12806765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 33606089 - 33606167
Alignment:
Q  248 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    |||| ||| ||||||| |||||||||||| ||||||| || |||||||     |||||||||| |||||||||||||||||||    
T  33606089 aaaaccggtttgtgaggtgaggattgcccctacttataaacacattttc----aggccatctcctatccgatgtgggactctt 33606167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 41594175 - 41594118
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  41594175 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 41594118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 42705111 - 42705168
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  42705111 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 42705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 2324317 - 2324261
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324317 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 7877559 - 7877491
Alignment:
Q  63 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| ||||||||||| || |||||||| || ||||||||||| | ||||||| ||||| |||||    
T  7877559 ttgaaattgaaccctataatatttattttagtcctcattttgagggactaaaatcaaatattcaacata 7877491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 15124555 - 15124611
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| ||||||||||||| || ||||||||||| |||| || |||||||||    
T  15124555 atcgtggttgggtctaacacaaccccacaaaatcggcttatgaggtggggattgccc 15124611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 29718405 - 29718341
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 284  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  29718405 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 29718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 37609179 - 37609123
Alignment:
Q  75 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  37609179 cctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 37609123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 335
Target Start/End: Complemental strand, 10523250 - 10523219
Alignment:
Q  304 ccatctcttatccgatgtgggactctttaaca 335  Q
    ||||||||||||||||||||||||||||||||    
T  10523250 ccatctcttatccgatgtgggactctttaaca 10523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 332
Target Start/End: Complemental strand, 14927179 - 14927071
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||||| ||||||||||| || |||   | ||| |||| ||||||||||||  |||||| || |||||    || ||| |||||||||||||||    
T  14927179 atcgtggttgagcctaacacaaccacacaaagctgacttatgaggtgaggattgcccccacttataaacacatt----gtcaggtcatctcttatccgat 14927084  T
Q  320 gtgggactcttta 332  Q
    ||| |||||||||    
T  14927083 gtgtgactcttta 14927071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 13572633 - 13572687
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  13572633 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 13572687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 16533613 - 16533551
Alignment:
Q  231 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||  |||||| || |||||    
T  16533613 gtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacatt 16533551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 17719462 - 17719371
Alignment:
Q  235 aacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    |||||||||  | |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||||||||||    
T  17719462 aacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatgtgggactctt 17719371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 30432816 - 30432762
Alignment:
Q  77 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  30432816 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 30432762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 4171684 - 4171741
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || |||||||| || | ||||||| |||||||||||    
T  4171684 ccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacata 4171741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 6880193 - 6880140
Alignment:
Q  78 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  6880193 ataatattcattttagtcctcattttgagggattaaaatcaaatattctacata 6880140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 14379337 - 14379280
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  14379337 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 14379280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 19191617 - 19191670
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  19191617 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 19191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 19204751 - 19204808
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| |||||| |||| || ||||||||||| | ||||||| |||||||||||    
T  19204751 ccctataatattcattctagtcctcattttgagggactaaaatcaaatattctacata 19204808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 28407800 - 28407906
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||||||||||  || || |||||    
T  28407800 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgttaggccaattcctaaccgat 28407895  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  28407896 gtgggactctt 28407906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 29683333 - 29683390
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||| ||||||    
T  29683333 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattttacata 29683390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 32884184 - 32884078
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  32884184 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 32884089  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  32884088 gtgggactctt 32884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 37812533 - 37812611
Alignment:
Q  248 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 330  Q
    ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| ||||||||||||||||||||||    
T  37812533 aaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatgtcttatccgatgtgggactctt 37812611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 2395305 - 2395373
Alignment:
Q  63 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| | | ||||||| ||||||||||  || ||||||||||| | ||||||| |||||||||||    
T  2395305 ttgaaattgatctctataatattcattttagccctcattttgagggactaaaatcaaatattctacata 2395373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 37769950 - 37770006
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||    
T  37769950 atcgtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgccc 37770006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 40149023 - 40149063
Alignment:
Q  233 ctaacacaacctcataaaatcggcttgtgagctgaggattg 273  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  40149023 ctaacacaaccccacaaaatcggcttgtgaggtgaggattg 40149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 5761 - 5867
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 319  Q
    |||||||||| | ||||||||||| |  |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || | || |||||||||||    
T  5761 atcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcagactatgtcttatccgat 5856  T
Q  320 gtgggactctt 330  Q
    |||||||||||    
T  5857 gtgggactctt 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 4611 - 4554
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  4611 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 4554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 43501 - 43444
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  43501 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 43444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 4440 - 4492
Alignment:
Q  224 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 4492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 212635 - 212579
Alignment:
Q  75 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  212635 cctataatattcattttagtcctcattttgagggactaaaatcaaatattctacata 212579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 2225 - 2122
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 322  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  2225 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 2130  T
Q  323 ggactctt 330  Q
    ||||||||    
T  2129 ggactctt 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 36989 - 36932
Alignment:
Q  74 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 131  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||    
T  36989 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacata 36932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 5732 - 5659
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 293  Q
    |||||||||| ||||||||||||| || |||| |||||||| || |||||||| |||  |||||| || |||||    
T  5732 atcgtggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattacccccacttataaacacatt 5659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 12721 - 12668
Alignment:
Q  223 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    ||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||    
T  12721 gtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgccc 12668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 56536 - 56480
Alignment:
Q  220 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 276  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  56536 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 56480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University