View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6649_low_33 (Length: 245)
Name: NF6649_low_33
Description: NF6649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6649_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 36730135 - 36729896
Alignment:
| Q |
1 |
tttcttcaatattttagggttgttcattatctcagccatggtccattgcattgccactgaggatgtgtctgttccagccaggaaaatgtccttgcatttg |
100 |
Q |
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| T |
36730135 |
tttcttcaatattttagggttgttcattatctcagccatggtccattgcattgccactgaggatgtatctgttccagcgaggaaaatgtccttgcatttg |
36730036 |
T |
|
| Q |
101 |
cataaacatgtataataatctcattaaattgaactcaccaactactataatgatcatatcatgtaattttaatttaatggccatggccacatccagcgag |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
36730035 |
cataaacaagtataataatctcattaaattgaactcaccaagtactataatgatcatatcatgtgattttaatttaatggccatggccacatccagcgag |
36729936 |
T |
|
| Q |
201 |
gaaaatctccttgcatttgcattgcaacttgatgatgtcc |
240 |
Q |
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|||||| ||| |||||||||||||| ||||||| |||||| |
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| T |
36729935 |
gaaaatgtccctgcatttgcattgccacttgattatgtcc |
36729896 |
T |
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