View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6652_low_5 (Length: 201)
Name: NF6652_low_5
Description: NF6652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6652_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 12317098 - 12317261
Alignment:
| Q |
19 |
atgaagaacaaaaactattgtcacattaatgattggaagtttgaaacttccaactgttaaagtactatagtcacnnnnnnnnnnnnnnnnnnnnnttaat |
118 |
Q |
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| T |
12317098 |
atgaagaacaaaaactattgtcacattaatgattggaagtttgaaacttccaactgttaaagtactatagtcacaaaaatctctaaaaaagaaaattaat |
12317197 |
T |
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| Q |
119 |
cctgtgatcatttgaagttaaaaaattttcaatttcaaacacaaattttccattatttatttat |
182 |
Q |
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| T |
12317198 |
cctgtgatcatttgaagttaaaaaagtttcaatttcaaacacaaattttccattatttatttat |
12317261 |
T |
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