View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6653_high_25 (Length: 250)
Name: NF6653_high_25
Description: NF6653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6653_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 6967619 - 6967385
Alignment:
| Q |
1 |
tcttctactttgtactactttgtttctttgtttaaactctattggtcttgtgtatacatataggctaggaacatttgtttctcatgtgtttgttacgtat |
100 |
Q |
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| T |
6967619 |
tcttctactttgtactactttgtttctttgtttaaactctattggtcttgtgtatacatataggctaggaacatttgtttctcatgtgtttgttacgtat |
6967520 |
T |
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| Q |
101 |
aaggacaaaatatgattatgagatgttgatagttgatcttgattcttgaatcagaattgcatgtctttttcatagtacactgtttcagaaacaggttgga |
200 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
6967519 |
aaggacaaaatatgatcatgagatgttgatagttgatcttgattcttgaatcagacttgcatgtctttttcatagtacactgttccagaaacaggttgga |
6967420 |
T |
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| Q |
201 |
cttttgaccacatgcaaaagacaacatagccacag |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
6967419 |
cttttgaccacatgcaaaagacaacatagccacag |
6967385 |
T |
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