View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6653_low_10 (Length: 469)

Name: NF6653_low_10
Description: NF6653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6653_low_10
NF6653_low_10
[»] chr3 (63 HSPs)
chr3 (195-404)||(5335962-5336171)
chr3 (39-193)||(10615276-10615430)
chr3 (39-196)||(10616673-10616833)
chr3 (47-194)||(46610009-46610156)
chr3 (49-177)||(28208057-28208184)
chr3 (47-195)||(46597418-46597566)
chr3 (47-197)||(15086219-15086370)
chr3 (57-197)||(37977429-37977566)
chr3 (49-195)||(28206981-28207123)
chr3 (47-125)||(48288271-48288349)
chr3 (47-199)||(22256197-22256350)
chr3 (49-126)||(43930712-43930789)
chr3 (49-126)||(2011872-2011949)
chr3 (47-123)||(24528472-24528548)
chr3 (57-195)||(46596094-46596232)
chr3 (57-126)||(15093633-15093702)
chr3 (47-113)||(27360492-27360558)
chr3 (49-126)||(2011124-2011201)
chr3 (139-196)||(18142199-18142256)
chr3 (57-126)||(27315262-27315331)
chr3 (139-192)||(48044276-48044329)
chr3 (141-194)||(54567747-54567800)
chr3 (49-125)||(43929976-43930052)
chr3 (47-194)||(22257244-22257390)
chr3 (49-124)||(27318151-27318226)
chr3 (57-195)||(38843470-38843608)
chr3 (50-116)||(52396360-52396426)
chr3 (139-196)||(18140938-18140995)
chr3 (57-126)||(38842186-38842255)
chr3 (49-126)||(51386329-51386406)
chr3 (47-177)||(18704971-18705094)
chr3 (93-195)||(14826031-14826133)
chr3 (433-466)||(5336168-5336201)
chr3 (139-196)||(7248863-7248920)
chr3 (57-126)||(16386511-16386580)
chr3 (57-126)||(24842889-24842958)
chr3 (139-196)||(24909378-24909435)
chr3 (139-196)||(31835843-31835900)
chr3 (57-126)||(37976037-37976105)
chr3 (148-196)||(51460774-51460822)
chr3 (139-193)||(4218868-4218923)
chr3 (144-195)||(12066228-12066279)
chr3 (143-194)||(12210028-12210079)
chr3 (93-176)||(14824769-14824852)
chr3 (79-126)||(23545467-23545514)
chr3 (139-194)||(29184983-29185038)
chr3 (143-198)||(49265297-49265352)
chr3 (59-126)||(51385665-51385732)
chr3 (81-196)||(23539260-23539377)
chr3 (139-181)||(51116225-51116267)
chr3 (162-195)||(6510214-6510247)
chr3 (143-196)||(11359455-11359508)
chr3 (163-196)||(20957195-20957228)
chr3 (164-197)||(27497796-27497829)
chr3 (142-199)||(38343179-38343236)
chr3 (143-196)||(45291418-45291471)
chr3 (162-195)||(49872974-49873007)
chr3 (139-195)||(15093716-15093772)
chr3 (148-196)||(30271542-30271590)
chr3 (141-177)||(37975987-37976023)
chr3 (162-194)||(47115587-47115619)
chr3 (162-194)||(49880762-49880794)
chr3 (139-198)||(51252286-51252346)
[»] chr1 (86 HSPs)
chr1 (39-197)||(14625367-14625525)
chr1 (39-198)||(14626680-14626840)
chr1 (47-197)||(9441564-9441715)
chr1 (41-195)||(9442893-9443048)
chr1 (47-194)||(52084735-52084884)
chr1 (257-376)||(6382924-6383045)
chr1 (39-195)||(23322511-23322668)
chr1 (37-192)||(2273503-2273657)
chr1 (47-126)||(13917181-13917260)
chr1 (47-126)||(37194400-37194478)
chr1 (49-126)||(13916159-13916236)
chr1 (39-203)||(23321254-23321419)
chr1 (57-195)||(43635834-43635970)
chr1 (42-115)||(52083630-52083702)
chr1 (49-126)||(5560940-5561017)
chr1 (47-126)||(6077008-6077087)
chr1 (57-197)||(8930267-8930406)
chr1 (262-376)||(6422239-6422353)
chr1 (39-124)||(2274564-2274649)
chr1 (49-126)||(37193546-37193623)
chr1 (195-260)||(6382830-6382897)
chr1 (47-114)||(27547406-27547473)
chr1 (57-126)||(30536435-30536504)
chr1 (49-118)||(51903390-51903459)
chr1 (257-376)||(6373633-6373751)
chr1 (193-256)||(6422140-6422203)
chr1 (57-195)||(8928814-8928953)
chr1 (59-126)||(44311275-44311342)
chr1 (139-192)||(1825296-1825349)
chr1 (139-196)||(26097029-26097086)
chr1 (139-195)||(26095813-26095869)
chr1 (257-376)||(6361185-6361303)
chr1 (139-198)||(13902061-13902120)
chr1 (203-257)||(6373552-6373606)
chr1 (162-207)||(47022094-47022139)
chr1 (145-197)||(13903379-13903431)
chr1 (139-195)||(16785721-16785777)
chr1 (143-195)||(32131909-32131961)
chr1 (57-181)||(38741488-38741612)
chr1 (161-205)||(50961345-50961389)
chr1 (193-241)||(6361038-6361088)
chr1 (201-257)||(6368640-6368698)
chr1 (139-194)||(51470129-51470184)
chr1 (57-181)||(4487551-4487677)
chr1 (197-239)||(6400329-6400371)
chr1 (139-197)||(25235771-25235829)
chr1 (279-376)||(6368759-6368856)
chr1 (143-196)||(14978715-14978768)
chr1 (139-195)||(33667634-33667691)
chr1 (57-126)||(37268891-37268960)
chr1 (139-191)||(40247382-40247435)
chr1 (193-241)||(6350200-6350248)
chr1 (193-233)||(6391938-6391978)
chr1 (140-196)||(24545455-24545511)
chr1 (143-198)||(35979590-35979645)
chr1 (79-126)||(37269602-37269649)
chr1 (49-116)||(44312044-44312111)
chr1 (139-193)||(47146370-47146425)
chr1 (139-194)||(49201387-49201442)
chr1 (144-194)||(52083580-52083631)
chr1 (162-200)||(2059451-2059489)
chr1 (162-204)||(2472609-2472651)
chr1 (52-126)||(5561649-5561722)
chr1 (147-181)||(8985817-8985851)
chr1 (164-198)||(13545575-13545609)
chr1 (162-196)||(18458827-18458861)
chr1 (139-196)||(33934635-33934693)
chr1 (143-197)||(38742387-38742441)
chr1 (47-89)||(40373522-40373564)
chr1 (139-195)||(1826436-1826493)
chr1 (162-195)||(9439427-9439460)
chr1 (162-195)||(24987607-24987640)
chr1 (139-195)||(25600929-25600986)
chr1 (141-194)||(25601922-25601975)
chr1 (148-197)||(30434277-30434326)
chr1 (155-196)||(33936095-33936136)
chr1 (139-195)||(36343153-36343210)
chr1 (154-195)||(44311207-44311248)
chr1 (162-194)||(10028002-10028034)
chr1 (143-191)||(15336378-15336426)
chr1 (74-126)||(27523863-27523915)
chr1 (154-194)||(40246277-40246317)
chr1 (139-195)||(44200326-44200382)
chr1 (148-196)||(47221949-47221997)
chr1 (162-198)||(48643364-48643400)
chr1 (154-197)||(50105413-50105457)
[»] chr2 (66 HSPs)
chr2 (39-195)||(1902929-1903086)
chr2 (39-202)||(38937410-38937573)
chr2 (39-195)||(1904310-1904467)
chr2 (39-194)||(44366867-44367023)
chr2 (39-194)||(7576325-7576480)
chr2 (47-194)||(38815003-38815150)
chr2 (47-194)||(38935945-38936091)
chr2 (54-197)||(7577693-7577837)
chr2 (39-198)||(16670495-16670654)
chr2 (39-126)||(38936998-38937085)
chr2 (47-126)||(21903993-21904072)
chr2 (39-126)||(38813644-38813731)
chr2 (39-197)||(23834578-23834736)
chr2 (49-126)||(38876058-38876135)
chr2 (50-195)||(38876934-38877079)
chr2 (39-196)||(23835675-23835831)
chr2 (39-197)||(18250791-18250950)
chr2 (39-126)||(44368286-44368373)
chr2 (49-126)||(11101163-11101239)
chr2 (39-195)||(18249630-18249786)
chr2 (39-125)||(16671705-16671791)
chr2 (47-126)||(41305950-41306029)
chr2 (45-126)||(5969797-5969878)
chr2 (49-126)||(31551974-31552050)
chr2 (47-126)||(5970666-5970745)
chr2 (49-126)||(36565304-36565381)
chr2 (49-126)||(11102077-11102154)
chr2 (53-126)||(22293460-22293533)
chr2 (51-126)||(10355076-10355151)
chr2 (141-196)||(19686183-19686238)
chr2 (47-126)||(41307057-41307136)
chr2 (49-118)||(10355232-10355301)
chr2 (57-126)||(22292547-22292616)
chr2 (57-126)||(39151237-39151306)
chr2 (49-124)||(31551598-31551673)
chr2 (139-196)||(15749010-15749067)
chr2 (139-195)||(22468226-22468283)
chr2 (139-195)||(22474447-22474504)
chr2 (139-195)||(30371384-30371440)
chr2 (75-126)||(18416611-18416662)
chr2 (139-193)||(22466982-22467037)
chr2 (139-198)||(28141684-28141743)
chr2 (139-194)||(44242357-44242412)
chr2 (162-196)||(17328090-17328124)
chr2 (139-196)||(21903921-21903979)
chr2 (139-196)||(28462495-28462553)
chr2 (139-197)||(45161383-45161440)
chr2 (164-197)||(3364588-3364621)
chr2 (139-196)||(8237987-8238044)
chr2 (147-196)||(15747749-15747798)
chr2 (162-195)||(16577372-16577405)
chr2 (164-197)||(19052200-19052233)
chr2 (162-195)||(19493473-19493506)
chr2 (162-195)||(22116154-22116187)
chr2 (162-195)||(34635705-34635738)
chr2 (139-196)||(44241095-44241152)
chr2 (162-194)||(19641446-19641478)
chr2 (162-194)||(19840039-19840071)
chr2 (162-202)||(20182256-20182296)
chr2 (162-198)||(22535450-22535486)
chr2 (162-198)||(23260316-23260352)
chr2 (162-194)||(28149691-28149723)
chr2 (162-194)||(29835102-29835134)
chr2 (162-194)||(37147551-37147583)
chr2 (162-198)||(38385931-38385967)
chr2 (139-195)||(41305880-41305935)
[»] chr8 (57 HSPs)
chr8 (39-206)||(27163104-27163272)
chr8 (39-193)||(27164560-27164714)
chr8 (39-195)||(39809988-39810145)
chr8 (47-194)||(39808649-39808795)
chr8 (39-197)||(42350079-42350238)
chr8 (47-194)||(42348961-42349108)
chr8 (49-126)||(28574607-28574684)
chr8 (46-126)||(5704439-5704519)
chr8 (39-126)||(1601155-1601242)
chr8 (39-195)||(1601672-1601826)
chr8 (39-126)||(1602800-1602887)
chr8 (41-194)||(1600077-1600228)
chr8 (49-126)||(28561502-28561579)
chr8 (49-126)||(28561931-28562008)
chr8 (49-126)||(28567000-28567077)
chr8 (49-126)||(28567429-28567506)
chr8 (49-126)||(3252231-3252308)
chr8 (57-177)||(5703070-5703190)
chr8 (52-195)||(28575027-28575170)
chr8 (139-195)||(39513866-39513922)
chr8 (57-126)||(21397802-21397871)
chr8 (57-126)||(21792295-21792364)
chr8 (57-126)||(39913854-39913923)
chr8 (139-196)||(40702012-40702069)
chr8 (139-194)||(2270293-2270348)
chr8 (139-194)||(31986230-31986287)
chr8 (139-193)||(34901503-34901557)
chr8 (57-126)||(6105624-6105693)
chr8 (141-195)||(31985010-31985065)
chr8 (57-126)||(16432679-16432748)
chr8 (139-195)||(12330332-12330388)
chr8 (162-198)||(25277731-25277767)
chr8 (139-198)||(25653700-25653759)
chr8 (162-197)||(29309799-29309834)
chr8 (164-201)||(7988785-7988823)
chr8 (92-126)||(9768259-9768293)
chr8 (162-196)||(29309563-29309597)
chr8 (139-197)||(38711942-38712000)
chr8 (164-197)||(4482042-4482075)
chr8 (162-195)||(14329625-14329658)
chr8 (57-126)||(16434468-16434537)
chr8 (57-126)||(32901497-32901566)
chr8 (162-195)||(34985347-34985380)
chr8 (162-194)||(960522-960554)
chr8 (148-200)||(4105291-4105342)
chr8 (162-198)||(25601972-25602008)
chr8 (162-194)||(27543650-27543682)
chr8 (162-198)||(27987293-27987329)
chr8 (163-195)||(27987552-27987584)
chr8 (162-198)||(28044595-28044631)
chr8 (163-195)||(28044854-28044886)
chr8 (154-198)||(28561430-28561474)
chr8 (154-198)||(28566928-28566972)
chr8 (139-198)||(34902739-34902799)
chr8 (139-195)||(39515124-39515180)
chr8 (148-200)||(40770525-40770576)
chr8 (164-196)||(43400669-43400701)
[»] chr5 (54 HSPs)
chr5 (39-195)||(15061725-15061881)
chr5 (39-196)||(11956137-11956295)
chr5 (39-196)||(15060161-15060319)
chr5 (39-196)||(41065558-41065716)
chr5 (39-195)||(41064143-41064300)
chr5 (39-195)||(11957550-11957707)
chr5 (39-195)||(15615102-15615258)
chr5 (47-194)||(21776816-21776964)
chr5 (47-194)||(30796579-30796726)
chr5 (47-196)||(15616409-15616559)
chr5 (39-195)||(30798480-30798636)
chr5 (39-171)||(21775485-21775617)
chr5 (39-126)||(29520203-29520290)
chr5 (39-126)||(29521331-29521418)
chr5 (47-126)||(10012717-10012796)
chr5 (57-195)||(11438338-11438476)
chr5 (42-126)||(40434544-40434628)
chr5 (42-122)||(8367903-8367983)
chr5 (63-126)||(33750986-33751049)
chr5 (47-126)||(40434316-40434394)
chr5 (57-194)||(37274748-37274883)
chr5 (139-198)||(9751678-9751737)
chr5 (47-122)||(11439709-11439784)
chr5 (57-126)||(40434055-40434123)
chr5 (63-126)||(33847179-33847242)
chr5 (139-193)||(13948584-13948638)
chr5 (139-193)||(28819537-28819591)
chr5 (57-126)||(4061429-4061498)
chr5 (57-124)||(33751944-33752011)
chr5 (141-202)||(10011611-10011671)
chr5 (148-201)||(29104437-29104490)
chr5 (57-126)||(33847658-33847727)
chr5 (143-195)||(11439803-11439855)
chr5 (141-196)||(19599968-19600024)
chr5 (139-203)||(26034836-26034900)
chr5 (146-197)||(8368006-8368057)
chr5 (162-205)||(10976772-10976815)
chr5 (139-194)||(11890101-11890155)
chr5 (49-116)||(42003990-42004057)
chr5 (83-125)||(10011683-10011725)
chr5 (149-195)||(15395543-15395589)
chr5 (139-205)||(25962791-25962857)
chr5 (148-194)||(34407904-34407950)
chr5 (139-177)||(35599330-35599368)
chr5 (162-196)||(38482316-38482350)
chr5 (139-195)||(9750446-9750503)
chr5 (141-194)||(10012810-10012863)
chr5 (139-196)||(18254370-18254427)
chr5 (162-195)||(22551521-22551554)
chr5 (139-195)||(889067-889123)
chr5 (162-194)||(12399611-12399643)
chr5 (139-195)||(26888459-26888515)
chr5 (162-206)||(31312796-31312840)
chr5 (143-198)||(35600544-35600600)
[»] chr4 (65 HSPs)
chr4 (39-197)||(20962191-20962349)
chr4 (39-195)||(34739887-34740044)
chr4 (47-196)||(29248240-29248389)
chr4 (39-191)||(34741295-34741448)
chr4 (39-194)||(20963601-20963757)
chr4 (39-196)||(29249611-29249769)
chr4 (49-194)||(12566850-12566996)
chr4 (39-197)||(50881325-50881482)
chr4 (47-197)||(54554380-54554529)
chr4 (49-121)||(46427158-46427230)
chr4 (39-126)||(55499319-55499406)
chr4 (49-126)||(50879976-50880053)
chr4 (39-195)||(55500306-55500464)
chr4 (49-126)||(43537519-43537596)
chr4 (52-126)||(43537752-43537826)
chr4 (65-191)||(51752686-51752812)
chr4 (57-126)||(2438320-2438389)
chr4 (63-195)||(40479442-40479574)
chr4 (78-193)||(21994328-21994441)
chr4 (57-126)||(51754118-51754187)
chr4 (47-123)||(37600875-37600951)
chr4 (143-194)||(550673-550724)
chr4 (139-194)||(34027196-34027251)
chr4 (139-194)||(54555353-54555408)
chr4 (147-197)||(43860923-43860973)
chr4 (57-118)||(9410076-9410137)
chr4 (49-126)||(49630509-49630586)
chr4 (76-196)||(14183609-14183729)
chr4 (49-177)||(17695884-17696012)
chr4 (139-198)||(9136406-9136465)
chr4 (79-126)||(46426169-46426216)
chr4 (162-200)||(20125443-20125481)
chr4 (57-126)||(7533658-7533727)
chr4 (57-126)||(9410200-9410269)
chr4 (57-126)||(15695096-15695165)
chr4 (162-195)||(35539805-35539838)
chr4 (57-126)||(37421821-37421890)
chr4 (139-192)||(51164022-51164075)
chr4 (162-197)||(21780119-21780154)
chr4 (162-197)||(22272927-22272962)
chr4 (148-199)||(38656066-38656117)
chr4 (139-198)||(48029411-48029469)
chr4 (47-126)||(49629701-49629779)
chr4 (139-194)||(50138488-50138543)
chr4 (147-198)||(51754210-51754261)
chr4 (47-126)||(54555259-54555338)
chr4 (84-126)||(15694529-15694571)
chr4 (162-196)||(24215766-24215800)
chr4 (141-195)||(50879908-50879962)
chr4 (57-126)||(7535347-7535416)
chr4 (162-195)||(11563542-11563575)
chr4 (146-195)||(11861902-11861951)
chr4 (162-195)||(37273420-37273453)
chr4 (162-195)||(50727589-50727622)
chr4 (162-195)||(50735603-50735636)
chr4 (93-126)||(52264512-52264545)
chr4 (163-195)||(9001443-9001475)
chr4 (139-194)||(9410284-9410340)
chr4 (139-195)||(11862028-11862084)
chr4 (148-192)||(12352470-12352514)
chr4 (148-196)||(13128436-13128484)
chr4 (162-210)||(16493502-16493550)
chr4 (141-193)||(17289980-17290032)
chr4 (139-191)||(20612969-20613021)
chr4 (139-195)||(41331768-41331824)
[»] chr6 (34 HSPs)
chr6 (39-196)||(24235532-24235690)
chr6 (39-194)||(22056482-22056638)
chr6 (39-194)||(22058180-22058336)
chr6 (49-196)||(24234327-24234475)
chr6 (39-195)||(56014-56170)
chr6 (47-177)||(24914456-24914586)
chr6 (47-196)||(12322713-12322862)
chr6 (39-194)||(54807-54961)
chr6 (39-196)||(12321560-12321718)
chr6 (57-195)||(34762181-34762319)
chr6 (47-111)||(5999793-5999857)
chr6 (49-124)||(6000582-6000657)
chr6 (139-194)||(14328648-14328703)
chr6 (139-194)||(14421658-14421713)
chr6 (57-194)||(33483696-33483833)
chr6 (143-196)||(3063489-3063542)
chr6 (57-198)||(11425688-11425829)
chr6 (79-177)||(33485017-33485115)
chr6 (139-193)||(14327370-14327424)
chr6 (139-193)||(14420380-14420434)
chr6 (139-200)||(31851752-31851813)
chr6 (149-203)||(16129485-16129539)
chr6 (154-196)||(22366235-22366277)
chr6 (162-196)||(29942468-29942502)
chr6 (93-126)||(6759073-6759106)
chr6 (57-122)||(11424830-11424895)
chr6 (163-196)||(22574056-22574089)
chr6 (139-195)||(6000674-6000729)
chr6 (162-194)||(10344050-10344082)
chr6 (162-194)||(13114398-13114430)
chr6 (143-195)||(22573801-22573853)
chr6 (154-194)||(23270226-23270266)
chr6 (162-194)||(24387786-24387818)
chr6 (139-195)||(30409671-30409727)
[»] chr7 (54 HSPs)
chr7 (39-194)||(17764601-17764757)
chr7 (47-195)||(17763335-17763484)
chr7 (39-126)||(48170163-48170250)
chr7 (49-198)||(34158054-34158203)
chr7 (39-198)||(9554161-9554321)
chr7 (49-203)||(1831892-1832045)
chr7 (49-196)||(9553398-9553546)
chr7 (47-195)||(1830811-1830959)
chr7 (39-126)||(25776407-25776494)
chr7 (47-124)||(11056803-11056880)
chr7 (49-105)||(48168915-48168971)
chr7 (49-126)||(13772551-13772629)
chr7 (139-197)||(48168847-48168905)
chr7 (57-126)||(24436305-24436374)
chr7 (57-126)||(35891075-35891144)
chr7 (140-197)||(1594127-1594184)
chr7 (141-196)||(21237349-21237404)
chr7 (51-126)||(33767303-33767378)
chr7 (57-116)||(47637794-47637853)
chr7 (49-126)||(13771629-13771706)
chr7 (139-196)||(42509040-42509097)
chr7 (75-190)||(8174888-8175004)
chr7 (143-198)||(11056725-11056781)
chr7 (143-197)||(48945181-48945235)
chr7 (148-197)||(6269525-6269574)
chr7 (139-195)||(24434906-24434963)
chr7 (141-202)||(33757402-33757463)
chr7 (57-126)||(47638737-47638806)
chr7 (139-198)||(5219038-5219098)
chr7 (139-195)||(14554450-14554506)
chr7 (148-196)||(19272460-19272508)
chr7 (146-198)||(48896475-48896527)
chr7 (63-126)||(8175894-8175956)
chr7 (59-126)||(9113343-9113410)
chr7 (139-194)||(13279419-13279474)
chr7 (95-126)||(24434980-24435011)
chr7 (139-177)||(1589403-1589441)
chr7 (162-196)||(9915649-9915683)
chr7 (162-196)||(9923561-9923595)
chr7 (162-196)||(23784582-23784616)
chr7 (57-126)||(11058092-11058161)
chr7 (57-126)||(17238206-17238275)
chr7 (162-195)||(24555926-24555959)
chr7 (57-126)||(31433559-31433628)
chr7 (81-126)||(37413787-37413832)
chr7 (162-198)||(13882599-13882635)
chr7 (162-194)||(23371449-23371481)
chr7 (141-196)||(24757995-24758051)
chr7 (162-198)||(26050428-26050464)
chr7 (162-198)||(26059787-26059823)
chr7 (163-195)||(35913310-35913342)
chr7 (162-194)||(38193219-38193251)
chr7 (162-194)||(39580191-39580223)
chr7 (154-194)||(42202161-42202201)
[»] scaffold0176 (1 HSPs)
scaffold0176 (47-195)||(196-346)
[»] scaffold0804 (1 HSPs)
scaffold0804 (39-198)||(2729-2889)
[»] scaffold0250 (2 HSPs)
scaffold0250 (47-198)||(10076-10227)
scaffold0250 (57-126)||(11488-11557)
[»] scaffold0210 (2 HSPs)
scaffold0210 (39-195)||(4706-4863)
scaffold0210 (39-203)||(5794-5962)
[»] scaffold0040 (2 HSPs)
scaffold0040 (57-194)||(64503-64640)
scaffold0040 (57-195)||(65962-66102)
[»] scaffold0246 (3 HSPs)
scaffold0246 (39-122)||(15947-16030)
scaffold0246 (63-195)||(17381-17513)
scaffold0246 (139-195)||(15871-15927)
[»] scaffold0228 (3 HSPs)
scaffold0228 (47-195)||(8081-8230)
scaffold0228 (47-195)||(15663-15812)
scaffold0228 (47-195)||(25615-25764)
[»] scaffold0227 (1 HSPs)
scaffold0227 (57-122)||(24857-24922)
[»] scaffold0725 (2 HSPs)
scaffold0725 (139-196)||(3912-3969)
scaffold0725 (139-196)||(4958-5017)
[»] scaffold0291 (1 HSPs)
scaffold0291 (49-126)||(20908-20985)
[»] scaffold0093 (3 HSPs)
scaffold0093 (57-126)||(8967-9036)
scaffold0093 (57-113)||(2741-2797)
scaffold0093 (57-113)||(7364-7420)
[»] scaffold0014 (2 HSPs)
scaffold0014 (139-194)||(228588-228645)
scaffold0014 (141-195)||(227368-227423)
[»] scaffold0129 (2 HSPs)
scaffold0129 (81-126)||(37335-37380)
scaffold0129 (93-126)||(30793-30826)
[»] scaffold0112 (2 HSPs)
scaffold0112 (57-118)||(36138-36199)
scaffold0112 (57-126)||(36919-36988)
[»] scaffold0136 (2 HSPs)
scaffold0136 (139-195)||(35598-35654)
scaffold0136 (139-195)||(638-694)
[»] scaffold0032 (1 HSPs)
scaffold0032 (143-203)||(91041-91101)
[»] scaffold1571 (1 HSPs)
scaffold1571 (57-126)||(114-183)
[»] scaffold1147 (1 HSPs)
scaffold1147 (57-126)||(2529-2598)
[»] scaffold0039 (1 HSPs)
scaffold0039 (139-197)||(110406-110465)
[»] scaffold0850 (2 HSPs)
scaffold0850 (57-126)||(1520-1589)
scaffold0850 (57-126)||(4564-4633)
[»] scaffold0769 (1 HSPs)
scaffold0769 (162-195)||(4176-4209)
[»] scaffold0497 (1 HSPs)
scaffold0497 (57-126)||(1469-1538)
[»] scaffold0238 (1 HSPs)
scaffold0238 (57-126)||(3540-3609)
[»] scaffold0933 (1 HSPs)
scaffold0933 (57-117)||(2637-2697)
[»] scaffold0384 (1 HSPs)
scaffold0384 (162-194)||(4452-4484)
[»] scaffold0142 (1 HSPs)
scaffold0142 (162-194)||(34851-34883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (162-194)||(1827-1859)
[»] scaffold0010 (1 HSPs)
scaffold0010 (162-194)||(26308-26340)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 195 - 404
Target Start/End: Original strand, 5335962 - 5336171
Alignment:
Q  195 ttttatttaaaactcatgattgaactgttcgattccacagaggcagcaccgtcaaagttatcatcacttacctcctctttttcttattttgttaaaatga 294  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  5335962 ttttgtttaaaactcatgagtgaactgttcgattccacagaggcagcactgacaaagttatcatcacttacctcctcttttccatattttgttaaaatga 5336061  T
Q  295 tcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattcttaactttcctcccaaataatgtagtgacaaattatgatta 394  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  5336062 tcaaaatgttcaatgtcgatggtcgatgtattctggtgagtttttcccttttttgattcttaactttcctcccaaataatgttgtgacaatttatgatta 5336161  T
Q  395 ttagcaacaa 404  Q
    ||||||||||    
T  5336162 ttagcaacaa 5336171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 10615430 - 10615276
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  10615430 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaattt 10615331  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  10615330 acagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 10616673 - 10616833
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct--aannnnnnnnnn 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||              
T  10616673 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaatttttttttt 10616772  T
Q  137 nnacagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
      |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  10616773 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 10616833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 46610156 - 46610009
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  46610156 gccacatcattgattctgctgagtcacagggctcagggagcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacaggggg 46610057  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  46610056 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 28208057 - 28208184
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||            |||||||| |    
T  28208057 cacatcatagattctgctgagtcacaggactcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaattacaggggg-a 28208155  T
Q  149 aaactaaaagtgccctatattacaggggg 177  Q
    |||| ||||||||||||||||||||||||    
T  28208156 aaaccaaaagtgccctatattacaggggg 28208184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 46597418 - 46597566
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||| ||| ||||| ||||||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||||||            ||||| ||    
T  46597418 gccacctcagagattatgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaattgatttttttacaggagg 46597517  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  46597518 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 46597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 15086370 - 15086219
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||| ||| |||||||||| |||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||||||            ||||||||    
T  15086370 gccacctcagagattctgctaagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaatatttttttttacaggggg 15086271  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 197  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  15086270 caaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttt 15086219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 37977429 - 37977566
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||||||||||||  ||||| ||||||||||| |||||| |||||||||||||||||||||||||||            |||||||||||||| |||    
T  37977429 agattctgctgagtcattgggcttagggggcaatcatgaagattcttcattttacaaggacggaatctaa---tttttttttacagggggcaaaaccaaa 37977525  T
Q  157 agtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  37977526 agtgtcctatattacagggggtaaagacctattaacccttt 37977566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 28207123 - 28206981
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||            |||||||| |    
T  28207123 cacatcatatattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttaca---acggaatctaa--aaaaaaatttacagggggga 28207029  T
Q  149 aaactaaaagtgccctatattacagg-gggtaaatacctattaaccct 195  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  28207028 aaaccaaaagtgccctatattacaggagggtaaagccctattaaccct 28206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 48288271 - 48288349
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta 125  Q
    |||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  48288271 gccacatcatagattctgttgagtcacagggctcaggaggcgatcctgaagaatctttattttacaaggacggaatcta 48288349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 22256350 - 22256197
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||| |||||||||| |||||  || || |||||| |||| ||||||||||||||||||||||||||||||||||            ||||||||    
T  22256350 gccacatcaaagattctgctaagtcaatggacttagggggtaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaatagttttacaggggg 22256251  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttta 199  Q
    |||||| ||||||| | ||||||||| ||||||||| || ||||||||||||||    
T  22256250 caaaaccaaaagtgtcatatattacaggggggtaaagacttattaaccctttta 22256197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 43930712 - 43930789
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  43930712 cacatcatagattctgctgagtcacagaactgagggggcaatcttgaagaatctttattttacaaggatggaatctaa 43930789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 2011872 - 2011949
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||| ||||||||||||  ||||||||    
T  2011872 cacatcatagattctgctgagtcatagggttcaggggacaatcctgaagaatctttattttacaaggatagaatctaa 2011949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 24528472 - 24528548
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc 123  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||| |||||| || ||||||| |||||||||||    
T  24528472 gccacatcagagattctgctgagtcatagggctcaggggacaatcttaaagaatatttattttacgaggacggaatc 24528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 46596232 - 46596094
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    |||||||||||||||| |||| ||| ||||||||| ||||||||||| ||||||||| || |||||||||            ||| ||| |||||| |||    
T  46596232 agattctgctgagtcataggggtcatggggcaatcctgaagaatctttattttacaatgatggaatctaagtttttttttttacatgggacaaaaccaaa 46596133  T
Q  157 agtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||| |||||||||||||||||||||   |||||||||||    
T  46596132 agtaccctatattacagggggtaaagctctattaaccct 46596094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 15093633 - 15093702
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  15093633 agattctgttgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggatggaatctaa 15093702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 27360558 - 27360492
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaa 113  Q
    ||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||||| |||||||||    
T  27360558 gccacatcatagattttgctgagtcatagggctcaggggagaatcctgaagaatctttattttacaa 27360492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 2011201 - 2011124
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| | |||||||||||||||| |||  || |||||||| ||||||||||| ||||||||||||| ||||||||    
T  2011201 cacatcaaatattctgctgagtcacaaggcatagagggcaatcctgaagaatctttattttacaaggacagaatctaa 2011124  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 18142199 - 18142256
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  18142199 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccctt 18142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 27315331 - 27315262
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| ||||||||||||| |||| |||||| ||||||||||||||| ||||||    
T  27315331 agattctgctgagtcattgggatcagggggcaatcctgaaaaatctttattttacaaggacgggatctaa 27315262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 48044329 - 48044276
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 192  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  48044329 acagggggcaaaaccaaaagtgccctatatcacagggggtaaagacctattaac 48044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 54567747 - 54567800
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  54567747 agggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 54567800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 43930052 - 43929976
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta 125  Q
    ||||||| ||||||||||||||||||  ||  |||||||| ||||||| |||||| |||||||||||||| ||||||    
T  43930052 cacatcaaagattctgctgagtcacaatgcatagggggcattcttgaataatctttattttacaaggacgaaatcta 43929976  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 22257244 - 22257390
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||| ||| ||||| || ||| ||| ||||||| ||||| |||| ||||||||||| ||||||||||||| ||||||||            ||| ||||    
T  22257244 gccacgtcagagattatgttgactcaaagggctcggggggaaatcctgaagaatctttattttacaaggacagaatctaa--aaaaaaaattacaagggg 22257341  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 194  Q
    |||||| |||||||||||||| |||| ||||||||| ||||||||||||    
T  22257342 caaaacaaaaagtgccctataatacaggggggtaaagacctattaaccc 22257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 27318226 - 27318151
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 124  Q
    ||||||||| ||||| ||||||||||||||||| | | ||||| ||||||||||| ||||||||| ||| ||||||    
T  27318226 cacatcatatattctactgagtcacagggctcatgagacaatcctgaagaatctttattttacaaagacagaatct 27318151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 38843470 - 38843608
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||||||||||||  || || ||||||||||| ||| |||||||||||||| |||||||| ||||||            |||||||||||||| |||    
T  38843470 agattctgctgagtcaatggacttagggggcaatcgtgacgaatcttcattttataaggacgggatctaa-aatttttttttacagggggcaaaaccaaa 38843568  T
Q  157 agtgccctatattac-agggggtaaatacctattaaccct 195  Q
    |||| |||||||||| | |||||||| |||||| ||||||    
T  38843569 agtgtcctatattacaaaggggtaaagacctatcaaccct 38843608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 52396360 - 52396426
Alignment:
Q  50 acatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaagga 116  Q
    |||||| ||||| ||||||||||||||||  | ||||||||||||||||||||| |||||| |||||    
T  52396360 acatcaaagattttgctgagtcacagggcataaggggcaatcttgaagaatctttattttataagga 52396426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 18140995 - 18140938
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  18140995 acagggagcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccctt 18140938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 38842255 - 38842186
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| |||| || || || ||||||||||| ||||||||||||| ||||||||    
T  38842255 agattctgctgagtcataggggtcagaggacattcctgaagaatctttattttacaaggacagaatctaa 38842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 51386329 - 51386406
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| |||||||||||| ||| | |||||||| ||||||  |||||||| || ||||||| ||||||||||||||    
T  51386329 cacatcagagattctgctgactcaaatggctcaggaggcaattctgaagaattttaattttacgaggacggaatctaa 51386406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 18705094 - 18704971
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||||||||||||||||||||||| ||||       ||||||| ||||||||||| |||| ||||||| |||||||||            ||||||||    
T  18705094 gccacatcatagattctgctgagtcaaaggg-------ggcaatcctgaagaatctttatttgacaaggaaggaatctaaaaaaaaaaatttacaggggg 18705002  T
Q  147 caaaactaaaagtgccctatattacaggggg 177  Q
     ||||| |||||||||||||||||| |||||    
T  18705001 gaaaaccaaaagtgccctatattactggggg 18704971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 14826031 - 14826133
Alignment:
Q  93 tgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 192  Q
    ||||||||||| ||||||||||||||||||||||            |||||||||||||| ||||||| |  |||||||||||||||||   ||||||||    
T  14826031 tgaagaatctttattttacaaggacggaatctaaaaaaaatattttacagggggcaaaaccaaaagtgacaaatattacagggggtaaaacactattaac 14826130  T
Q  193 cct 195  Q
    |||    
T  14826131 cct 14826133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 466
Target Start/End: Original strand, 5336168 - 5336201
Alignment:
Q  433 acaatcaaaaaggtcaaataataaataagtcgtt 466  Q
    ||||||||||||||||||||||||||||||||||    
T  5336168 acaatcaaaaaggtcaaataataaataagtcgtt 5336201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 7248920 - 7248863
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| |||| ||  |||||||||||||||||||  |||||||||||||    
T  7248920 acagggggcaaaaccaaaaatgatctatattacagggggtaaaggcctattaaccctt 7248863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 16386511 - 16386580
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  16386511 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 16386580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 24842958 - 24842889
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  24842958 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 24842889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 24909435 - 24909378
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| |||||||| |||| |  ||||||||||||||||||||| |||||||||||||    
T  24909435 acaggaggcaaaaccaaaatttacctatattacagggggtaaatgcctattaaccctt 24909378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 31835843 - 31835900
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||  ||||||| | |||||||||||||||||| || |||||||||||    
T  31835843 acagggggcaaaatcaaaagtgtcatatattacagggggtaaagacatattaaccctt 31835900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 37976105 - 37976037
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| || | || ||||| || |||||||| ||||||||||||||||||||||    
T  37976105 agattctgctgagtcataggggtctgagg-caatcctggagaatctttattttacaaggacggaatctaa 37976037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 51460774 - 51460822
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| |||| || |||||||||||||||||||| ||||||||||||||    
T  51460774 aaaacaaaaaatgacctatattacagggggtaaagacctattaaccctt 51460822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 4218868 - 4218923
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatatta-cagggggtaaatacctattaacc 193  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||    
T  4218868 acagggggcaaaaccaaaagtgacctatattaccagggggtaaaggcctattaacc 4218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 12066279 - 12066228
Alignment:
Q  144 gggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||  ||||||| |||||||||||||||||||| | |||||||||||    
T  12066279 gggcaaaatcaaaagtgacctatattacagggggtaaaaaactattaaccct 12066228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 12210079 - 12210028
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||| ||||||| ||||||||||||||||||||   ||||||||||    
T  12210079 ggggcaaaaccaaaagtgacctatattacagggggtaaaagtctattaaccc 12210028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 14824852 - 14824769
Alignment:
Q  93 tgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagggg 176  Q
    ||||||||||| ||||||||||||||||||||||            |||||||||||||  ||||||| |||||||||||||||    
T  14824852 tgaagaatctttattttacaaggacggaatctaaaaaaaatattttacagggggcaaaatcaaaagtgacctatattacagggg 14824769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 23545467 - 23545514
Alignment:
Q  79 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||| ||||||||||||||||||| | || |||||||||    
T  23545467 tcagggggcaatcctgaagaatcttcattttacgatgatggaatctaa 23545514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 29184983 - 29185038
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||| |||||||| ||||||| |||||||||||||| |||||  |||||||||||    
T  29184983 acaggaggcaaaaccaaaagtgacctatattacagggagtaaaggcctattaaccc 29185038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 49265297 - 49265352
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||| ||||| ||||||| |||||||||||| | |||||| |||||||||||||||    
T  49265297 gggggaaaaccaaaagtgacctatattacagagagtaaatgcctattaaccctttt 49265352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 51385732 - 51385665
Alignment:
Q  59 attctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| || ||| | |||||||||| ||||  ||||||||||| ||||||| ||||||||||||||    
T  51385732 attctgccgactcaaatggctcaggggacaattatgaagaatcttgattttacgaggacggaatctaa 51385665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 23539377 - 23539260
Alignment:
Q  81 agggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattaca--gggggt 178  Q
    ||||||||||| | ||||||||||||||||| |||| |||||||||            |||||||||||||| |||||||   |||||||||  ||||||    
T  23539377 agggggcaatcctaaagaatcttcattttacgaggatggaatctaaatttttttttttacagggggcaaaaccaaaagtggtgtatattacagggggggt 23539278  T
Q  179 aaatacctattaaccctt 196  Q
    |||  |||||||||||||    
T  23539277 aaaggcctattaaccctt 23539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 51116267 - 51116225
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaa 181  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||    
T  51116267 acaggaggcaaaactaaaattgccatatattacagggggtaaa 51116225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 6510247 - 6510214
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  6510247 cctatattacagggggtaaagacctattaaccct 6510214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 11359508 - 11359455
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||| ||||| ||||||| |||||||| |||||||||||  |||||||||||||    
T  11359508 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccctt 11359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 20957195 - 20957228
Alignment:
Q  163 ctatattacagggggtaaatacctattaaccctt 196  Q
    ||||||||||||||||||| ||||||||||||||    
T  20957195 ctatattacagggggtaaagacctattaaccctt 20957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 27497829 - 27497796
Alignment:
Q  164 tatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||| |||||||||||||||    
T  27497829 tatattacagggggtaaagacctattaacccttt 27497796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 38343236 - 38343179
Alignment:
Q  142 gggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttta 199  Q
    ||||||||||  ||||||| | ||||||||||| ||||||  ||||||||||||||||    
T  38343236 gggggcaaaatcaaaagtgacatatattacaggaggtaaaggcctattaaccctttta 38343179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 45291471 - 45291418
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||| ||||||| |||||||||||||||||||   | |||||||||||    
T  45291471 ggggcaaaaccaaaagtgacctatattacagggggtaagggcatattaaccctt 45291418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 49872974 - 49873007
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  49872974 cctatattacagggggtaaagacctattaaccct 49873007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 15093716 - 15093772
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||  |||||| |||||||||| ||||||||||   |||||||||||    
T  15093716 acagggggcaaaatcaaaagtaccctatattatagggggtaaagttctattaaccct 15093772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 30271590 - 30271542
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||| || |||||||||||| ||||||| | ||||||||||||    
T  30271590 aaaactaaaaatgacctatattacagagggtaaagaactattaaccctt 30271542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 37976023 - 37975987
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacaggggg 177  Q
    |||||||||||| |||||| |||||||||||||||||    
T  37976023 agggggcaaaaccaaaagtaccctatattacaggggg 37975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 47115587 - 47115619
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  47115587 cctatattacagggggtaaagacctattaaccc 47115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 49880762 - 49880794
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  49880762 cctatattacagggggtaaagacctattaaccc 49880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 51252286 - 51252346
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccctttt 198  Q
    |||||||| ||||| | || || |||||||||||||||| |||| ||||||||||||||||    
T  51252286 acaggggggaaaaccagaaatgacctatattacagggggataaagacctattaaccctttt 51252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 14625525 - 14625367
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||                
T  14625525 atgtaggcgccacatcatagattctgctgagtcacagggctcagagggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt 14625426  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  14625425 acagggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaacccttt 14625367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 198
Target Start/End: Original strand, 14626680 - 14626840
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  14626680 atgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaattt 14626779  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctttt 198  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  14626780 acaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctttt 14626840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 9441715 - 9441564
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  9441715 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaattttttacaggggg 9441616  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 197  Q
    |||||| ||||||| | ||||||||| ||||||||| |||||||||||||||    
T  9441615 caaaaccaaaagtgtcttatattacaggggggtaaagacctattaacccttt 9441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 195
Target Start/End: Original strand, 9442893 - 9443048
Alignment:
Q  41 gtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnac 140  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||    
T  9442893 gtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaattttttttac 9442992  T
Q  141 agggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    | |||||||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  9442993 aaggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccct 9443048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 52084735 - 52084884
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||            |||||||     
T  52084735 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaattttacagggga 52084834  T
Q  147 caaaactaaaagtgccctatattaca--gggggtaaatacctattaaccc 194  Q
    |||||| |||||||| ||||||||||  ||||||||| ||||||||||||    
T  52084835 caaaaccaaaagtgctctatattacagggggggtaaagacctattaaccc 52084884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 6382924 - 6383045
Alignment:
Q  257 atcacttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttg--attct 354  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| |||||||||  ||||     
T  6382924 atcatttacctcctcttttccttattttgttaaaatgatcaaaacgttcaatgtcgatggtccacgtattctggtgagttttttccttttttgtaattca 6383023  T
Q  355 taactttcctcccaaataatgt 376  Q
    ||| ||||||||||||||||||    
T  6383024 taattttcctcccaaataatgt 6383045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 23322511 - 23322668
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| || |||||||| ||||||||||||||||||||||||||||||||||                
T  23322511 atgtaggtgccacatcaaagattctgctgagtcaatgggcttagagggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataatt 23322610  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  23322611 acagggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccct 23322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 2273657 - 2273503
Alignment:
Q  37 ctatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnn 136  Q
    ||||||||| ||||||||| ||||||||||||||||  ||||| |||| |||||| ||||||||||||||||||||||||||||||||||              
T  2273657 ctatgtaggtgccacatcaaagattctgctgagtcaatgggcttagggagcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaat 2273558  T
Q  137 nnacagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 192  Q
      |||| |||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  2273557 ttacagagggc-aaacaaaaagtgccctatattacagggggtaaagacctattaac 2273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 13917181 - 13917260
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13917181 gccacatcatggattctgctgagtcacagggctcaggaggcaatcttgaagaatctttattttacaaggacggaatctaa 13917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 37194400 - 37194478
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37194400 gccacatcatagattctgctgagtcacggggctcagggg-caatcttgaagaatctttattttacaaggacggaatctaa 37194478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 13916236 - 13916159
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13916236 cacatcatagattgtgctgagtcacagcgctcagtgggcaatcttgaagaatctttattttacaaggacggaatctaa 13916159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 203
Target Start/End: Complemental strand, 23321419 - 23321254
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||| | ||||||||| ||||||  ||||| | ||||||||| ||||||||||||||||||||||||||||||||||                
T  23321419 atgtaggtgccacattaaagattctgcagagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttttttttt 23321320  T
Q  139 acagggggcaaaactaaaagtgccctatattacagg-gggtaaatacctattaacccttttattta 203  Q
    ||| |||||||||| ||||||||||||||||||||| || |||| | ||||||||||| |||||||    
T  23321319 acatggggcaaaaccaaaagtgccctatattacaggaggataaagatctattaaccctattattta 23321254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 43635970 - 43635834
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||            | |||||||||||| |||    
T  43635970 agattctgctgagtcaatgggcttaggggtcaatcgtgaagaatcttcattttacaaggacgaaatctaatttttttttt--aaagggggcaaaaccaaa 43635873  T
Q  157 agtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  43635872 agtgccctatattacagggggtaaagacctattaaccct 43635834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 52083702 - 52083630
Alignment:
Q  42 taggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaagg 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52083702 taggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaa-aatcttcattttacaagg 52083630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 5561017 - 5560940
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5561017 cacatcaaagattctgctgagtcacagagcatagggggcaatcttgaagaatctttattttacaaggacggaatctaa 5560940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 6077087 - 6077008
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  6077087 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatctaa 6077008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 8930267 - 8930406
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||| |||||||            ||||||| |||||| |||    
T  8930267 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaa-tttttttttttacaggggacaaaaccaaa 8930365  T
Q  157 agtgccctatattacagggggtaaatacctattaacccttt 197  Q
    ||| || ||||||||||||||||||   |||||||||||||    
T  8930366 agtaccttatattacagggggtaaaactctattaacccttt 8930406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 6422239 - 6422353
Alignment:
Q  262 ttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattcttaacttt 361  Q
    |||||||  ||||| | |||||||||||||| ||||||| ||||||||||||||||| | |||||| |||||| | ||||| ||| |||||||||| ||     
T  6422239 ttacctcaacttttccatattttgttaaaataatcaaaacgttcaatgtcgatggtccacgtattctggtgaggtgttcccctttgtgattcttaattta 6422338  T
Q  362 cctcccaaataatgt 376  Q
     ||||||||||||||    
T  6422339 gctcccaaataatgt 6422353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 2274564 - 2274649
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 124  Q
    ||||||| ||| ||||| |||||||||||||| |  ||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  2274564 atgtaggtgcctcatcaaagattctgctgagttaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatct 2274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 37193623 - 37193546
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| |||||||||| |||||||| ||  ||||||||||||||||||||||| |||||||||||| |||||||||    
T  37193623 cacatcaaagattctgctcagtcacagtgcatagggggcaatcttgaagaatctttattttacaaggatggaatctaa 37193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 6382830 - 6382897
Alignment:
Q  195 ttttatttaaaactcatgattgaactgttcgattc--cacagaggcagcaccgtcaaagttatcatca 260  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  6382830 ttttatttaaaactcatgattgaactgttcaattccacacagaggcagcactgtcaaagttatcatca 6382897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 27547473 - 27547406
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaag 114  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||    
T  27547473 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaag 27547406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 30536504 - 30536435
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||| ||||||| |||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  30536504 agattctgatgagtcatagggatcaggaggcaatcatgaagaatctttattttacaaggacggaatctaa 30536435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 51903390 - 51903459
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacg 118  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||| |||||||| |||||||||||||||||    
T  51903390 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatattcattttacaaggacg 51903459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 6373633 - 6373751
Alignment:
Q  257 atcacttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattctta 356  Q
    |||| |||||||||||||| | |||||||||||||| || |||| ||||| ||||| ||||  |||||||| |||| ||| ||||||||||| ||| |||    
T  6373633 atcagttacctcctcttttccatattttgttaaaataataaaaaagttcagtgtcggtggttcatgtattctggtgtgttgttccctttttt-attttta 6373731  T
Q  357 actttcctcccaaataatgt 376  Q
    | || | |||||||||||||    
T  6373732 atttacgtcccaaataatgt 6373751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 6422140 - 6422203
Alignment:
Q  193 ccttttatttaaaactcatgattgaactgttcgattccacagaggcagcaccgtcaaagttatc 256  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||| ||||||    
T  6422140 ccttttatttaaaactcatgattgaattgttcaattccacagaggcggcacagtcaaggttatc 6422203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 8928953 - 8928814
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn-acagggggcaaaactaa 155  Q
    ||||| ||||||||||  ||||| |||||| | |  |||||||||||||||||||||| |||||||||||             |||||||||||||  ||    
T  8928953 agattttgctgagtcaatgggcttagggggtagttgtgaagaatcttcattttacaagaacggaatctaaaaaaaaaaaaattacagggggcaaaatcaa 8928854  T
Q  156 aagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  8928853 aagtgccttatattacagggggtaaagacctattaaccct 8928814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 44311342 - 44311275
Alignment:
Q  59 attctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||| ||| ||||| | |||||||||||||||||||||| |||||||| |||||||||||||    
T  44311342 attctgctgattcaaagggcacggggggcaatcttgaagaatctttattttacatggacggaatctaa 44311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 1825349 - 1825296
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 192  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  1825349 acagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 26097029 - 26097086
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  26097029 acaggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccctt 26097086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 26095869 - 26095813
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||    
T  26095869 acagggggcaaaaccataagtgacctatattacagggggtaaagacctattaaccct 26095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 6361185 - 6361303
Alignment:
Q  257 atcacttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattctta 356  Q
    |||| |||||||||||||| | |||||||||||||| || ||||  |||||||| ||  ||| | |||||| |||||||| || |||||| ||||||| |    
T  6361185 atcatttacctcctcttttccatattttgttaaaataatgaaaacattcaatgttgaacgtccacgtattctggtgagttgtt-ccttttgtgattctca 6361283  T
Q  357 actttcctcccaaataatgt 376  Q
    | || |||||||||||||||    
T  6361284 atttacctcccaaataatgt 6361303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 13902120 - 13902061
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||| |||| |||||||||||||||| |||||| ||||||||||| ||||    
T  13902120 acagggggcaaaaccaaaactgccctatattacaggtggtaaagacctattaaccatttt 13902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 6373552 - 6373606
Alignment:
Q  203 aaaactcatgattgaactgttcgattccacagaggcagcaccgtcaaagttatca 257  Q
    |||||||||||||||| ||||| |||||||||||||||||| |||||||| ||||    
T  6373552 aaaactcatgattgaattgttcaattccacagaggcagcactgtcaaagtcatca 6373606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 47022094 - 47022139
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttatttaaaac 207  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  47022094 cctatattacagggggtaaagacctattaacccttttaattaaaac 47022139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 13903379 - 13903431
Alignment:
Q  145 ggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||| ||||||| |||||||||||||||||||| | |||||||||||||    
T  13903379 ggcaaaaccaaaagtgacctatattacagggggtaaagatctattaacccttt 13903431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 16785777 - 16785721
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| |||| |||||||||||||||  ||||||||||||    
T  16785777 acagggggcaaaaccaaaagtgacctacattacagggggtaaaggcctattaaccct 16785721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 32131909 - 32131961
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||  |||||| |||||||||||||||||||| |||||||||||||    
T  32131909 ggggcaaaaccgaaagtgacctatattacagggggtaaagacctattaaccct 32131961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 38741612 - 38741488
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||| |||||||||| |||| | ||||||||||  ||||||||||| |||||||||||| | |||||||            |||||||||||||| |||    
T  38741612 agattttgctgagtcataggggttagggggcaattctgaagaatctttattttacaaggatgaaatctaaaaaaaatattttacagggggcaaaaccaaa 38741513  T
Q  157 agtgccctatattacagggggtaaa 181  Q
    |||| | ||||||||||||| ||||    
T  38741512 agtgtcttatattacaggggttaaa 38741488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 50961389 - 50961345
Alignment:
Q  161 ccctatattacagggggtaaatacctattaacccttttatttaaa 205  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  50961389 ccctaaattacagggggtaaatacatattaacccttttatttaaa 50961345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 6361038 - 6361088
Alignment:
Q  193 ccttttatttaaaactcatgattgaactgttcgattc--cacagaggcagc 241  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  6361038 ccttttatttaaaactcatgattgaactgttcaattcctcacagaggcagc 6361088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 6368640 - 6368698
Alignment:
Q  201 ttaaaactcatgattgaactgttcgattcc--acagaggcagcaccgtcaaagttatca 257  Q
    |||||||||||||||||| ||||| |||||  ||||||||||||| |||||||||||||    
T  6368640 ttaaaactcatgattgaattgttcaattccgcacagaggcagcactgtcaaagttatca 6368698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 51470184 - 51470129
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||| ||||||||| ||||||| | |||||||||||||||||| ||||||||||||    
T  51470184 acagagggcaaaaccaaaagtgacttatattacagggggtaaagacctattaaccc 51470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 4487677 - 4487551
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aannnnnnnnnnnnacagggggcaaaactaa 155  Q
    ||||| |||||||||| |||| | | ||||||||| ||||||||||| |||||||||||||  ||||| ||            |||||||||||||||||    
T  4487677 agattttgctgagtcatagggattatggggcaatcctgaagaatctttattttacaaggacaaaatctaaaaaaaataaaaatacagggggcaaaactaa 4487578  T
Q  156 aagtgccctatattac-agggggtaaa 181  Q
    |||||| ||||||||| ||||||||||    
T  4487577 aagtgctctatattacaagggggtaaa 4487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 6400329 - 6400371
Alignment:
Q  197 ttatttaaaactcatgattgaactgttcgattccacagaggca 239  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  6400329 ttatttaaaactcatgattgaactgttcaattcctcagaggca 6400371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 25235829 - 25235771
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||| |||| | ||| || |||||||||||||||||||| |||||||||||||||    
T  25235829 acagggggaaaaaatgaaattgacctatattacagggggtaaagacctattaacccttt 25235771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 376
Target Start/End: Original strand, 6368759 - 6368856
Alignment:
Q  279 tattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattcttaactttcctcccaaataatgt 376  Q
    |||||||||||||| ||||||| |||  |||||  ||||  |||| ||  |||||||| ||||||||| |||||||||| ||  ||||||||||||||    
T  6368759 tattttgttaaaataatcaaaacgtttcatgtcagtggttcatgtgttatggtgagttcttcccttttgtgattcttaatttatctcccaaataatgt 6368856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 14978715 - 14978768
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||| ||||||| ||||||| ||||||||||||  |||||||||||||    
T  14978715 ggggcaaaaccaaaagtgtcctatataacagggggtaaaggcctattaaccctt 14978768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 33667634 - 33667691
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||  ||||||||||||    
T  33667634 acagggggcaaaaccaaaagtgacctatattacaggggtgtaaaggcctattaaccct 33667691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 37268960 - 37268891
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||| |||||| |||| | ||||||||||| |||||||| || |||||| ||| |||||||||||    
T  37268960 agattctgcagagtcataggggtgagggggcaatcctgaagaatttttattttataagaacggaatctaa 37268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 40247382 - 40247435
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaa 191  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||    
T  40247382 acaggggggaaaaccaaaagtgccctatattacatgggggtaaagacctattaa 40247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 6350200 - 6350248
Alignment:
Q  193 ccttttatttaaaactcatgattgaactgttcgattccacagaggcagc 241  Q
    ||||||||||  |||||||||||||||||||| ||||| ||||||||||    
T  6350200 ccttttatttttaactcatgattgaactgttcaattcctcagaggcagc 6350248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 6391938 - 6391978
Alignment:
Q  193 ccttttatttaaaactcatgattgaactgttcgattccaca 233  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  6391938 ccttatatttaaaactcatgattgaactgttcaattccaca 6391978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 24545511 - 24545455
Alignment:
Q  140 cagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||  |||||||||||||    
T  24545511 caggaggcaaaaccaaaagtgacctatattatagggggtaaaagcctattaaccctt 24545455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 35979590 - 35979645
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||  ||||||| | |||||||||||||| ||| ||||||||||||||||    
T  35979590 ggggcaaaatcaaaagtgacttatattacagggggaaaagacctattaaccctttt 35979645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 37269602 - 37269649
Alignment:
Q  79 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||| ||||||||||| ||| |||||||||| |||||||    
T  37269602 tcagggggcaatcctgaagaatctttattgtacaaggacgaaatctaa 37269649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 44312044 - 44312111
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaagga 116  Q
    ||||||| ||||| ||||||||||  ||||  | ||||||||| ||||||||||| ||||||||||||    
T  44312044 cacatcaaagattatgctgagtcaatgggcatatggggcaatcgtgaagaatcttaattttacaagga 44312111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 47146370 - 47146425
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattac-agggggtaaatacctattaacc 193  Q
    |||||| ||||||| ||||||| |||||||||| |||||||||| |||||||||||    
T  47146370 acagggagcaaaaccaaaagtgacctatattacaagggggtaaagacctattaacc 47146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 49201387 - 49201442
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||| ||||| ||||||| |||||||| |||||||||||  |||||||||||    
T  49201387 acaggggggaaaaccaaaagtgacctatattgcagggggtaaaagcctattaaccc 49201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 52083631 - 52083580
Alignment:
Q  144 gggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 194  Q
    ||||||||| |||| ||||||||||||||| |||||||| ||||||||||||    
T  52083631 gggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccc 52083580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 2059451 - 2059489
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttat 200  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  2059451 cctatattacagggggtaaagacctattaatccttttat 2059489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 2472609 - 2472651
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttatttaa 204  Q
    |||||||||||||||||||| ||||||||||| |||| |||||    
T  2472609 cctatattacagggggtaaagacctattaaccattttttttaa 2472651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 5561649 - 5561722
Alignment:
Q  52 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||| |||  |||| | || ||||||||||||||| |||||| |||  ||||||||||    
T  5561649 atcatagattctgctgagtcataggt-tcagagagcgatcttgaagaatctttattttataagagcggaatctaa 5561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 8985817 - 8985851
Alignment:
Q  147 caaaactaaaagtgccctatattacagggggtaaa 181  Q
    |||||||||||||| ||||||||||||||||||||    
T  8985817 caaaactaaaagtgtcctatattacagggggtaaa 8985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 13545609 - 13545575
Alignment:
Q  164 tatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||||||| ||||||||||||||||    
T  13545609 tatattacagggggtaaagacctattaaccctttt 13545575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 18458827 - 18458861
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  18458827 cctatattacagggggtaaagacctattaaccctt 18458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 33934693 - 33934635
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctt 196  Q
    |||||||||||||| |||||||  |||||||||||||| |||||  |||||||||||||    
T  33934693 acagggggcaaaaccaaaagtgatctatattacaggggcgtaaaaccctattaaccctt 33934635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 38742387 - 38742441
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||  |||||| |||||||||||||||||||||   |||||||||||||    
T  38742387 ggggcaaaatcaaaagtaccctatattacagggggtaaagctctattaacccttt 38742441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 40373522 - 40373564
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaa 89  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||    
T  40373522 gccacatcatagattatgctgagtcacagagctcagagggcaa 40373564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 1826436 - 1826493
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||  ||||||| ||||||||||| ||||||||| || ||||||||||    
T  1826436 acagggggcaaaatcaaaagtgacctatattacaggggggtaaaaacatattaaccct 1826493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 9439427 - 9439460
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  9439427 cctatattacagggggtaaagacctattaaccct 9439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 24987640 - 24987607
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  24987640 cctatattacagggggtaaagacctattaaccct 24987607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 25600986 - 25600929
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 195  Q
    |||||||| ||||| ||||||| |||||||| ||| |||||||| |||||||||||||    
T  25600986 acaggggggaaaaccaaaagtgacctatattgcagaggggtaaagacctattaaccct 25600929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 25601922 - 25601975
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||| ||||| ||||||| |||||||| |||||||||||  |||||||||||    
T  25601922 aggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccc 25601975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 30434326 - 30434277
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    ||||| |||| || |||||||||||||||||||| ||| |||||||||||    
T  30434326 aaaacaaaaaatgacctatattacagggggtaaagaccgattaacccttt 30434277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 33936095 - 33936136
Alignment:
Q  155 aaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||| ||||||||||||||||||||  |||||||||||||    
T  33936095 aaagtgacctatattacagggggtaaaatcctattaaccctt 33936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 36343210 - 36343153
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagg-gggtaaatacctattaaccct 195  Q
    |||||||| ||||| |||| || ||||||||||||| ||||||| |||||||||||||    
T  36343210 acaggggggaaaacaaaaaatgacctatattacaggagggtaaagacctattaaccct 36343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 44311248 - 44311207
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  44311248 aaaagtgtcctatattacagggggtaaaggcctattaaccct 44311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 10028002 - 10028034
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  10028002 cctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 15336426 - 15336378
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaa 191  Q
    |||| ||||| |||| || |||||||||||||||||||| |||||||||    
T  15336426 ggggaaaaaccaaaaatgacctatattacagggggtaaagacctattaa 15336378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 27523915 - 27523863
Alignment:
Q  74 agggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||| |||||||||||||||||| || ||||| |||  |||||||||||    
T  27523915 agggctcaaggggcaatcttgaagaatttttattttgcaacaacggaatctaa 27523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 40246317 - 40246277
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||||||  ||||||||||||||||||| |||||||||||    
T  40246317 aaaagtgcgttatattacagggggtaaatgcctattaaccc 40246277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 44200382 - 44200326
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||| | ||||| |||| || ||||||||||| |||||||| |||||||||||||    
T  44200382 acagggtggaaaaccaaaaatggcctatattacaaggggtaaagacctattaaccct 44200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 47221949 - 47221997
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| ||||||| |||||||| |||| |||||| ||||||||||||||    
T  47221949 aaaaccaaaagtgacctatattgcaggaggtaaagacctattaaccctt 47221997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 48643364 - 48643400
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    |||| |||||||||||||||||| |||||||||||||    
T  48643364 cctaaattacagggggtaaatacatattaaccctttt 48643400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 50105413 - 50105457
Alignment:
Q  154 aaaagtgccctatattacagg-gggtaaatacctattaacccttt 197  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  50105413 aaaagtgacctatattacaggagggtaaagacctattaacccttt 50105457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 7e-53; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 1903086 - 1902929
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  1903086 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt 1902987  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  1902986 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 1902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 38937410 - 38937573
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  38937410 atgtaggttccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaatttttttttttt 38937509  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattt 202  Q
    | |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  38937510 atagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctattattt 38937573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 1904310 - 1904467
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  1904310 atgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaattttttttc 1904409  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  1904410 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 1904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 44367023 - 44366867
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||                
T  44367023 atgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaattt 44366924  T
Q  139 acagggggcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccc 194  Q
    |||||||||||||| |||||||||||||||||||||| | |||| ||||||||||||    
T  44366923 acagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 44366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 7576480 - 7576325
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||                
T  7576480 atgtaggtgccacatcatagattctgctgagtcacatggctcagggg-caatcttgaagaatcttcattttacaaggacggaatctaaaaaaaatatttt 7576382  T
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccc 194  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  7576381 acagggggcaaaaccaaaagtgccctatattacagggggataaagacctattaaccc 7576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 38815003 - 38815150
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||| |||    
T  38815003 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-attttttttttacagaggg 38815101  T
Q  147 caaaactaaaagtgccctatattacagggg-gtaaatacctattaaccc 194  Q
    |||||| ||||||||| ||||||||||||| ||||| ||||||||||||    
T  38815102 caaaaccaaaagtgccttatattacaggggagtaaagacctattaaccc 38815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 38936091 - 38935945
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||| |||    
T  38936091 gccacatcattgattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagtggg 38935992  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  38935991 caaaaccaaaagtgtcctatattaca-ggggtaaagacctattaaccc 38935945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 7577693 - 7577837
Alignment:
Q  54 catagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaact 153  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||            |||||||| |||||     
T  7577693 catagattctgctgagtcacaaggctcagggggcaatcttgatgaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggtaaaacc 7577792  T
Q  154 aaaagtgccctatattaca-gggggtaaatacctattaacccttt 197  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  7577793 aaaagtgccctatattacaggggggtaaagacctattaacccttt 7577837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 16670654 - 16670495
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||||||||||||| ||||||||||||                
T  16670654 atgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcattttacaatgacggaatctaaaaaaaaaaaatt 16670555  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  16670554 acagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccttttt 16670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 38937085 - 38936998
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38937085 atgtaggttccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 38936998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 21904072 - 21903993
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21904072 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 21903993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 38813731 - 38813644
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38813731 atgtaggtgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatattcattttacaaggacggaatctaa 38813644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 23834736 - 23834578
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||                
T  23834736 atgtaggtgccacatcaaagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatctaa-aaaaaaaaatt 23834638  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 197  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  23834637 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttt 23834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 38876135 - 38876058
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38876135 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 38876058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 38876934 - 38877079
Alignment:
Q  50 acatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaa 149  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||            |||||  | ||    
T  38876934 acatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaatttacaggaaggaa 38877033  T
Q  150 aactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  38877034 aaccaaaagtgccttatattacagggggtaaagccctattaaccct 38877079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 23835675 - 23835831
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| |||||| |||||||||  ||||| ||| | | ||| ||||||||||||||||||||||||||||||| |                 
T  23835675 atgtaggtgccacatcaaagattccgctgagtcaatgggcttaggagacgatcgtgaagaatcttcattttacaaggacggaatcga-tttttttttttt 23835773  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23835774 acagggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccctt 23835831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 18250791 - 18250950
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||| ||||| ||||||||||||||||  ||||| ||||  ||||| ||||||||||||||||||||||||||||||||||                
T  18250791 atgtaggtgccgcatcaaagattctgctgagtcaatgggcttagggaacaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaatt 18250890  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 197  Q
    ||||| |||||||| |||| |||||||||||||| ||||||||| |||||||||||||||    
T  18250891 acaggaggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaacccttt 18250950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 44368286 - 44368373
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  44368286 atgtaggtgccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatctaa 44368373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 11101239 - 11101163
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  11101239 cacatcatagattctgctgagtcacaacgctcagggggcaatcttgaagaatctttatttt-caaggacggaatctaa 11101163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 18249786 - 18249630
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| | ||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||                
T  18249786 atgtaggtgtcacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacagaatctaa-aaaaaaaattt 18249688  T
Q  139 acagggggcaaaactaaaagtgccctatattac-agggggtaaatacctattaaccct 195  Q
    ||||| | |||||| ||||||||| |||||||| |||||||||| |||||||||||||    
T  18249687 acaggagacaaaaccaaaagtgccatatattacaagggggtaaagacctattaaccct 18249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 16671705 - 16671791
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta 125  Q
    ||||||| ||||||||| ||||||||||||||||  | ||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  16671705 atgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcattttacaagaacggaatcta 16671791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 41306029 - 41305950
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||| ||||||||||||||||  ||| | ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  41306029 gccacatcagagattctgctgagtcaatgggtttagggggcaatcgtgaagaagcttcattttacaaggacggaatctaa 41305950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 5969878 - 5969797
Alignment:
Q  45 gcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||| | |||||||||||||||| |||| ||||||| ||||| | ||||||||| ||||||||||||||||||||||    
T  5969878 gcgccacataagagattctgctgagtcataggggtcaggggacaatcattaagaatctttattttacaaggacggaatctaa 5969797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 31552050 - 31551974
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||| ||| || ||||||||||||||||||||||    
T  31552050 cacatcatagattctgctgagtcacaaggctcagggggcaaacatgaaaaat-tttattttacaaggacggaatctaa 31551974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 5970666 - 5970745
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||| ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||||||||| |||||||||||    
T  5970666 gccacctcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaagaacggaatctaa 5970745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 36565381 - 36565304
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||| || |||  | ||||||||| ||||||||||| ||||||||||||||||||||||    
T  36565381 cacatcaaagattctgctgagtcccaaggcatatggggcaatcctgaagaatctttattttacaaggacggaatctaa 36565304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 11102077 - 11102154
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||| ||||||||||||| ||  | ||| ||||||||||||||||| |||||| |||||||||||||||    
T  11102077 cacatcaaagattatgctgagtcacagtgcatatgggacaatcttgaagaatctttattttaaaaggacggaatctaa 11102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 22293460 - 22293533
Alignment:
Q  53 tcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| ||| ||||||  |||||||||  ||||||||||| ||||||||||||| ||||||||    
T  22293460 tcatagattctgctgactcaaagggcttggggggcaatactgaagaatctttattttacaaggaccgaatctaa 22293533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 10355151 - 10355076
Alignment:
Q  51 catcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| |||||||||| ||||| || | ||||| ||||| ||||||||||| |||| |||||||||||||||||    
T  10355151 catcataaattctgctgaatcacatggtttaggggacaatcctgaagaatctttatttgacaaggacggaatctaa 10355076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 19686183 - 19686238
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||    
T  19686183 agggggcaaaaccaaaagtgccctatattacagggggtaaagcactattaaccctt 19686238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 41307057 - 41307136
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||| ||||||||||||  || ||||||| ||||||||||||||||||| || ||||||||| |||| |||||||    
T  41307057 gccacgtcagagattctgctgacccaaagggctcggggggcaatcttgaagaatatttattttacaaagacgaaatctaa 41307136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 10355232 - 10355301
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacg 118  Q
    ||||||| ||||| |||||||||| |||||  ||||| ||||| ||||||||||| ||||||||||||||    
T  10355232 cacatcaaagattatgctgagtcatagggcataggggacaatcctgaagaatctttattttacaaggacg 10355301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 22292616 - 22292547
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||| | |||  ||||| ||||||||||| |||||||||||||||||||||||||  |||||||    
T  22292616 agattctgctcaatcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacaaaatctaa 22292547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 39151237 - 39151306
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| ||| |||||| ||| ||||||  ||||||||||| ||||||||||||| ||||||||    
T  39151237 agattctgctgactcaaagggcttaggaggcaattctgaagaatctttattttacaaggacagaatctaa 39151306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 31551673 - 31551598
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 124  Q
    ||||||| ||||||| |||||||||||||    |||||||||| | |||||| |||||||||| ||||||||||||    
T  31551673 cacatcaaagattctactgagtcacagggtatggggggcaatcctaaagaattttcattttacgaggacggaatct 31551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 15749010 - 15749067
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||  |||||||||||||    
T  15749010 acagggggcaaaaccaaaagtgacatatattacaggggataaaagcctattaaccctt 15749067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 22468226 - 22468283
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||    
T  22468226 acagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22468283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 22474447 - 22474504
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||    
T  22474447 acagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22474504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 30371440 - 30371384
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||| ||||| |||| || |||||||||||||| ||||| |||||||||||||    
T  30371440 acaggggggaaaaccaaaaatgacctatattacagggagtaaagacctattaaccct 30371384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 18416611 - 18416662
Alignment:
Q  75 gggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||| |||||||||| | ||||||||| ||||||| ||||||||||||||    
T  18416611 gggctcggggggcaatcctaaagaatctttattttacgaggacggaatctaa 18416662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 22467037 - 22466982
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaacc 193  Q
    ||||||| |||||| ||||||| |||||||||||| |||||||| |||||||||||    
T  22467037 acaggggacaaaaccaaaagtgacctatattacaggggggtaaagacctattaacc 22466982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 28141743 - 28141684
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||| | ||||| ||||||| |||||||||||||||||||| | ||||||| ||||||    
T  28141743 acagggtgtaaaaccaaaagtgacctatattacagggggtaaagatctattaatcctttt 28141684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 44242357 - 44242412
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| |||||||  |||||||||||| ||||||  |||||||||||    
T  44242357 acagggggcaaaaccaaaagtgatctatattacaggaggtaaaggcctattaaccc 44242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 17328124 - 17328090
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  17328124 cctatattacagggggtaaagacctattaaccctt 17328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 21903979 - 21903921
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctt 196  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||  || ||||||||||    
T  21903979 acaggggggaaaaccaaaagtgccctatattacaggggtgtaaagccccattaaccctt 21903921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 28462495 - 28462553
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccctt 196  Q
    |||||| ||||||| ||||||| |||||||||||||||| ||||  |||||||||||||    
T  28462495 acagggtgcaaaaccaaaagtgacctatattacagggggataaaggcctattaaccctt 28462553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 45161383 - 45161440
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||   |||||||||||||    
T  45161383 acaggaggcaaaaccaaaagtgccctatattaca-ggggtaaaacactattaacccttt 45161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 3364588 - 3364621
Alignment:
Q  164 tatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||| |||||||||||||||    
T  3364588 tatattacagggggtaaagacctattaacccttt 3364621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 8238044 - 8237987
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| |||||||  |||||||||| ||||||||   ||||||||||||    
T  8238044 acagggggcaaaaccaaaagtgttctatattacatggggtaaaacactattaaccctt 8237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 15747798 - 15747749
Alignment:
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||| ||||||| ||||||||||||||||||||   ||||||||||||    
T  15747798 caaaaccaaaagtgacctatattacagggggtaaaggtctattaaccctt 15747749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 16577372 - 16577405
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  16577372 cctatattacagggggtaaagacctattaaccct 16577405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 19052200 - 19052233
Alignment:
Q  164 tatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||| |||||||||||||||    
T  19052200 tatattacagggggtaaagacctattaacccttt 19052233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 19493473 - 19493506
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  19493473 cctatattacagggggtaaagacctattaaccct 19493506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 22116187 - 22116154
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  22116187 cctatattacagggggtaaagacctattaaccct 22116154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 34635738 - 34635705
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  34635738 cctatattacagggggtaaagacctattaaccct 34635705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 44241152 - 44241095
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||||| |||||| |||| || |||||||||||||| |||||  |||||||||||||    
T  44241152 acaggggacaaaaccaaaaatgacctatattacagggagtaaagtcctattaaccctt 44241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 19641478 - 19641446
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  19641478 cctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 19840071 - 19840039
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  19840071 cctatattacagggggtaaagacctattaaccc 19840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 20182296 - 20182256
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttattt 202  Q
    ||||||||||||||| |||| ||||||||||||| ||||||    
T  20182296 cctatattacaggggataaaaacctattaaccctattattt 20182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 22535486 - 22535450
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  22535486 cctatattaaagggggtaaagacctattaaccctttt 22535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 23260352 - 23260316
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  23260352 cctatattacagggagtaaagacctattaaccctttt 23260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 28149691 - 28149723
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  28149691 cctatattacagggggtaaaaacctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 29835134 - 29835102
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  29835134 cctatattacagggggtaaagacctattaaccc 29835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 37147583 - 37147551
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  37147583 cctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 38385967 - 38385931
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  38385967 cctatattacagggggtaaagacctattaaccttttt 38385931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 41305935 - 41305880
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||| ||||| ||| ||||| ||||||||||||| |||||||| |||||||||||||    
T  41305935 acagagggcagaaccaaaagcgccctatattaca-ggggtaaagacctattaaccct 41305880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 39 - 206
Target Start/End: Complemental strand, 27163272 - 27163104
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  27163272 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaattttttt 27163173  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttttatttaaaa 206  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||    
T  27163172 acaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctttaattaaaaa 27163104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 27164560 - 27164714
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  27164560 atgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt 27164659  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27164660 acagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 27164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 39809988 - 39810145
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  39809988 atgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaataattt 39810087  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  39810088 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 39810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 39808795 - 39808649
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||            ||||||||    
T  39808795 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaatttttttttttacaggggg 39808696  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  39808695 caaaaccaaaagtgccctatattaca-ggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 42350079 - 42350238
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||                
T  42350079 atgtaggtgccacatcatagattctgctaagtcacagagctcagtgggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaattt 42350178  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 197  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||| |||||||||||||||    
T  42350179 acagggggcaaaaccaaaaatgctctatattacaggggggtaaagacctattaacccttt 42350238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 42349108 - 42348961
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||            ||||||||    
T  42349108 gccacatcatagattctgctgagtcacagggttcaggggacaatcttgaagaatcttcattttacaaggacggaatttaa-aaagaaaaattacaggggg 42349010  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 194  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  42349009 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 28574684 - 28574607
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  28574684 cacatcatagattctgctgagtcacagggttcagggggcaatcttgaagaatctttattttaaaaggacggaatctaa 28574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 5704439 - 5704519
Alignment:
Q  46 cgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  5704439 cgccacatcatagatactgctgagtcacagggctcagggggtaatcttgaagaatctttattttacaaggacgaaatctaa 5704519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 1601155 - 1601242
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||  |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  1601155 atgtaggttccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 1601242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 1601826 - 1601672
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||| |||                
T  1601826 atgtaggtgccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttactaggacggaatttaa---ttttttttt 1601730  T
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 195  Q
    | |||||||||||| |||||||||||||||||||| ||||||||   |||||||||||    
T  1601729 atagggggcaaaaccaaaagtgccctatattacagaggggtaaaggtctattaaccct 1601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 1602800 - 1602887
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||| ||||||||||||||||| ||| | ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1602800 atgtaggtgccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatctaa 1602887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 1600228 - 1600077
Alignment:
Q  41 gtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnac 140  Q
    ||||| ||||||||| ||||||||||||||||    ||| ||||||||||| |||||||||||||||||| |||||||||||||||            |     
T  1600228 gtaggtgccacatcaaagattctgctgagtcaattagcttagggggcaatcgtgaagaatcttcattttataaggacggaatctaa--ttttttttttat 1600131  T
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||| ||||||| | |||||||||||||||||| ||||||||||||    
T  1600130 agggggcaaaaccaaaagtggcttatattacagggggtaaagacctattaaccc 1600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 28561579 - 28561502
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||||||||||| | ||||||||||||| ||||||||    
T  28561579 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatccttattttacaaggacagaatctaa 28561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 28561931 - 28562008
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||||| ||  ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  28561931 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatctaa 28562008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 28567077 - 28567000
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||||||||||| | ||||||||||||| ||||||||    
T  28567077 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatccttattttacaaggacagaatctaa 28567000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 28567429 - 28567506
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||||| ||  ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  28567429 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatctaa 28567506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 3252308 - 3252231
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||| ||||||||  ||||| ||||||||||| ||||||||||| |||||| |||||||||||||||    
T  3252308 cacatcagagattctactgagtcaatgggcttagggggcaatcgtgaagaatctttattttataaggacggaatctaa 3252231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 5703190 - 5703070
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||| ||||||||||| ||  ||||| ||||||||||||||||| |||||||||||||| |||||||            |||  ||| |||||||||    
T  5703190 agattcttctgagtcacagtgcataggggacaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaaaaatttacactggggaaaactaaa 5703091  T
Q  157 agtgccctatattacaggggg 177  Q
    |||||||||||||||||||||    
T  5703090 agtgccctatattacaggggg 5703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 28575027 - 28575170
Alignment:
Q  52 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaa 151  Q
    |||| ||||||||||||||||||| ||  || |||||||||||||||||||| |||||| ||||||| |||||||             ||||||| ||||    
T  28575027 atcaaagattctgctgagtcacagtgcatagtgggcaatcttgaagaatctttattttataaggacgaaatctaaaaaaaaaaatttgcaggggg-aaaa 28575125  T
Q  152 ctaaaagtgccctatattacaggg-ggtaaatacctattaaccct 195  Q
    | |||||||||||||||||||||| ||||||  ||||||||||||    
T  28575126 ccaaaagtgccctatattacagggtggtaaagtcctattaaccct 28575170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 39513922 - 39513866
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  39513922 acagggggcaaaaccaaaagtgacctatattacagggggtaaatgcctattaaccct 39513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 21397802 - 21397871
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| | |||| |||| ||||||||||||| |||||||||||||| |||||||    
T  21397802 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttattttacaaggacgaaatctaa 21397871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 21792295 - 21792364
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| | |||| |||| ||||||||||||| |||||||||||||| |||||||    
T  21792295 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttattttacaaggacgaaatctaa 21792364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 39913854 - 39913923
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||||||||||  || || | ||||||||| ||||||||||||||||||||||||||||||||||    
T  39913854 agattttgctgagtcaatggacttatggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 39913923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 40702012 - 40702069
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  40702012 acagggggcaaaacgaaaagtgacctatattacagggggtaaaggcctattaaccctt 40702069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 2270293 - 2270348
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||    
T  2270293 acagggggcaaaaccaaaagtgacctataatacagggggtaaagacctattaaccc 2270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 31986230 - 31986287
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  31986230 acagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 31986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 34901557 - 34901503
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  34901557 acagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaacc 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 6105693 - 6105624
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| || ||||||| || | ||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  6105693 agattatgttgagtcatagaggtcagggggcaatcctgaagaatctttattttacaagtacggaatctaa 6105624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 31985065 - 31985010
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccct 195  Q
    |||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||    
T  31985065 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 31985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 16432748 - 16432679
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  16432748 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 16432679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 12330388 - 12330332
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||| ||||||| || |  |||||||||||||||||||| |||||||||||||    
T  12330388 acagggggaaaaactagaaataacctatattacagggggtaaagacctattaaccct 12330332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 25277731 - 25277767
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||||||||| ||||||||||||||||    
T  25277731 cctatattacagggggtaaagacctattaaccctttt 25277767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 25653759 - 25653700
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||| ||||| |||| || ||||||||||||||||||||   ||||||||||||||    
T  25653759 acaggggggaaaaccaaaaatgacctatattacagggggtaaaacactattaaccctttt 25653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 29309799 - 29309834
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||||| |||||||||||||||    
T  29309799 cctatattacagggggtaaaaacctattaacccttt 29309834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 7988823 - 7988785
Alignment:
Q  164 tatattacag-ggggtaaatacctattaacccttttatt 201  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7988823 tatattacagaggggtaaatacctattaacccttttatt 7988785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 9768259 - 9768293
Alignment:
Q  92 ttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| ||||||||||||||||||||||    
T  9768259 ttgaagaatcttgattttacaaggacggaatctaa 9768293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 29309597 - 29309563
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  29309597 cctatattacagggggtaaagacctattaaccctt 29309563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 38711942 - 38712000
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||| |||||| ||| || ||||||||||||||||||||   |||||||||||||    
T  38711942 acagggggtaaaactgaaaatgacctatattacagggggtaaaacactattaacccttt 38712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 4482075 - 4482042
Alignment:
Q  164 tatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||| |||||||||||||||    
T  4482075 tatattacagggggtaaaaacctattaacccttt 4482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 14329625 - 14329658
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  14329625 cctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 16434468 - 16434537
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| || || ||||||||||||||||| |||||  |||||||||    
T  16434468 agattctgctgagtcattggggtgaggggccagtcctgaagaatcttcatttttcaagggtggaatctaa 16434537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 32901497 - 32901566
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  32901497 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 32901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 34985347 - 34985380
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  34985347 cctatattacagggggtaaagacctattaaccct 34985380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 960522 - 960554
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  960522 cctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 4105291 - 4105342
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttat 200  Q
    ||||| |||| || ||||||||||||||| |||| ||||||||||||||||||    
T  4105291 aaaacaaaaaatgacctatattacagggg-taaagacctattaacccttttat 4105342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 25601972 - 25602008
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  25601972 cctatattacatggggtaaagacctattaaccctttt 25602008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 27543650 - 27543682
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  27543650 cctatattacagggggtaaagacctattaaccc 27543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 27987329 - 27987293
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  27987329 cctatattatagggggtaaagacctattaaccctttt 27987293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 27987552 - 27987584
Alignment:
Q  163 ctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||||||||||| |||||||||||||    
T  27987552 ctatattacagggggtaaagacctattaaccct 27987584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 28044631 - 28044595
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  28044631 cctatattatagggggtaaagacctattaaccctttt 28044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 28044854 - 28044886
Alignment:
Q  163 ctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||||||||||| |||||||||||||    
T  28044854 ctatattacagggggtaaagacctattaaccct 28044886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 28561474 - 28561430
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||||||||||||||||||||||   ||||||||| ||||    
T  28561474 aaaagtgccctatattacagggggtaaagctctattaaccttttt 28561430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 28566972 - 28566928
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||||||||||||||||||||||   ||||||||| ||||    
T  28566972 aaaagtgccctatattacagggggtaaagctctattaaccttttt 28566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 34902739 - 34902799
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctttt 198  Q
    |||||||| ||||| ||||||  ||||||||||||||| |||||| ||||||||| |||||    
T  34902739 acaggggggaaaaccaaaagtaacctatattacaggggtgtaaatgcctattaactctttt 34902799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 39515124 - 39515180
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||  |||| ||||||| |||||||||||||| |||||  ||||||||||||    
T  39515124 acagggggtcaaaccaaaagtgacctatattacagggagtaaaggcctattaaccct 39515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 40770576 - 40770525
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttat 200  Q
    ||||| |||| || ||||||||||| ||| |||||||||||||||||||||||    
T  40770576 aaaaccaaaaatgacctatattacaaggg-taaatacctattaacccttttat 40770525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 43400701 - 43400669
Alignment:
Q  164 tatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||| ||||||||||||||    
T  43400701 tatattacagggggtaaagacctattaaccctt 43400669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 15061725 - 15061881
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  15061725 atgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttattttttt 15061824  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15061825 acagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 15061881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 11956295 - 11956137
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  11956295 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt 11956196  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  11956195 acaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 11956137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 15060319 - 15060161
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  15060319 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaattttt 15060220  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  15060219 acagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 15060161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 41065558 - 41065716
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||                
T  41065558 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggaaggaatctaaaaaaaaaatttt 41065657  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  41065658 acaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 41065716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 41064300 - 41064143
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  41064300 atgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt 41064201  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  41064200 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 41064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 11957550 - 11957707
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||                
T  11957550 atgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcgtcattttacaaggacggaatctaaaaaaaaaatttt 11957649  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  11957650 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 11957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 15615258 - 15615102
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||                
T  15615258 atgtaggtgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcaatttacaaggacggaatctaaaaaaaaaatttt 15615159  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    || |||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15615158 accggggacaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 15615102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 21776816 - 21776964
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  21776816 gccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaggggg 21776915  T
Q  147 caaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 194  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  21776916 caaaaccaaaagtgccctatattacagaggggtaaagacctattaaccc 21776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 30796726 - 30796579
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||            ||| ||||    
T  30796726 gccacatcatagattctgctgagtcacagggctcagggtgcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaagggg 30796627  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  30796626 caaaaccaaaagtgccctatattatagggggtaaagacctattaaccc 30796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 15616409 - 15616559
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  15616409 gccagatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacaggggg 15616508  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    |||||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  15616509 caaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 15616559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 30798480 - 30798636
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  30798480 atgtaggtgtcacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaatt 30798579  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||  || ||||||||||||||  ||||||||| |||||||||||||    
T  30798580 acagggggcaaaatcaatagtgccctatattaaggggggtaaagacctattaaccct 30798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 21775617 - 21775485
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||                
T  21775617 atgtaggtgccacatcatagattctgctgagtcatagggttcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaatttttttttt 21775518  T
Q  139 acagggggcaaaactaaaagtgccctatattac 171  Q
    ||| |||||||||| ||||||||||||||||||    
T  21775517 acaaggggcaaaaccaaaagtgccctatattac 21775485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 29520290 - 29520203
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  29520290 atgtaggtgccacatcatagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaagacggaatctaa 29520203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 29521331 - 29521418
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  29521331 atgtaggtgccacatcaaagattctgctgagtcattgggcttaggaggcaatcgtgaagaatcttcattttacaaggacggaatctaa 29521418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 10012717 - 10012796
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  10012717 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatctaa 10012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 11438476 - 11438338
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    |||||||||||||||| |||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||            |||||| ||||||| |||    
T  11438476 agattctgctgagtcataggggtcaggggacaatcctgaagaatctttattttacatggacggaatctaaaaaaaaaaatttacagggagcaaaaccaaa 11438377  T
Q  157 agtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||| |||||||||||||||||||||   |||||||||||    
T  11438376 agtaccctatattacagggggtaaagctctattaaccct 11438338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 40434628 - 40434544
Alignment:
Q  42 taggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||| ||||||||| ||||||||||||||||  ||||| ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  40434628 taggagccacatcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggatggaatctaa 40434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 8367903 - 8367983
Alignment:
Q  42 taggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 122  Q
    |||| ||||||||| ||||||||||| ||||  | ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  8367903 taggtgccacatcaaagattctgctgcgtcaatgagcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 8367983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 33751049 - 33750986
Alignment:
Q  63 tgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  33751049 tgctgagtcatagggatcagggggcaatcctgaagaatctttattttacaaggacggaatctaa 33750986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 40434316 - 40434394
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||  |||||||| |||||||||||||||||||||||||    
T  40434316 gccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaat-ttcattttacaaggacggaatctaa 40434394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 37274883 - 37274748
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    |||||||||||||||| |||  | ||||||||||| ||||||||||| ||||||||||||||||||| ||            |||||||||||||| |||    
T  37274883 agattctgctgagtcataggagttagggggcaatcctgaagaatctttattttacaaggacggaatcaaa--aaaaaaaattacagggggcaaaaccaaa 37274786  T
Q  157 agtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||| |||||||||| ||||||||||   ||||||||||    
T  37274785 agtaccctatattatagggggtaaagctctattaaccc 37274748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 9751678 - 9751737
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||    
T  9751678 acagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaaccctttt 9751737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 11439709 - 11439784
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 122  Q
    ||||| ||| ||||||||||||||||  ||||| || |||||||  ||||||||||||||||||||||||||||||    
T  11439709 gccacctcagagattctgctgagtcaatgggcttagtgggcaattgtgaagaatcttcattttacaaggacggaat 11439784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 40434123 - 40434055
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| ||| || |||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  40434123 agattctgctgactcaaagagctc-gggggcaatcctgaagaatctttattttacaaggacggaatctaa 40434055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 33847242 - 33847179
Alignment:
Q  63 tgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||| ||| |||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  33847242 tgctgaatcatagggatcagggggcaatcctgaagaatctttattttacaaggacagaatctaa 33847179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 13948584 - 13948638
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||    
T  13948584 acagggggcaaaaccaaaagtgccctatattacaggaggtaaaggcctattaacc 13948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 28819591 - 28819537
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  28819591 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 4061429 - 4061498
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| |||||||||| | || ||||||| ||||| ||||||||||| |||||||||||||| |||||||    
T  4061429 agattttgctgagtcataagggtcaggggacaatcctgaagaatctttattttacaaggacgaaatctaa 4061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 33751944 - 33752011
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 124  Q
    |||||||| ||||||| ||||  |||||| |||||||||||||| || ||||||||| ||||||||||    
T  33751944 agattctgatgagtcatagggggcaggggacaatcttgaagaatttttattttacaatgacggaatct 33752011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 10011671 - 10011611
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattt 202  Q
    |||||||||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||||||||    
T  10011671 agggggcaaaaccaaaagtgtcctatattacacgggataaagacctattaa-ccttttattt 10011611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 29104490 - 29104437
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttatt 201  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||||| ||||    
T  29104490 aaaactgaaaatgacctatattacagggggtaaagacctattaacccttatatt 29104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 33847658 - 33847727
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||| ||||||| |||  ||||| | |||||||||||||| || |||||||||||||| |||||||    
T  33847658 agattctgatgagtcataggagtcaggagacaatcttgaagaatttttattttacaaggacgaaatctaa 33847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 11439803 - 11439855
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||| |||||||| |||||||||||| | |||| |||||||||||||    
T  11439803 ggggcaaaaccaaaagtgctctatattacaggagataaagacctattaaccct 11439855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 19600024 - 19599968
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccctt 196  Q
    |||||||||||| ||||||| |||||||||||| ||||||||  |||||||||||||    
T  19600024 agggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccctt 19599968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 26034900 - 26034836
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 203  Q
    |||||||| ||||| |||| || |||||||| ||| ||||||| |||||||||||||||| ||||    
T  26034900 acagggggaaaaaccaaaaatgacctatattgcagagggtaaagacctattaaccctttttttta 26034836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 8368006 - 8368057
Alignment:
Q  146 gcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    ||||||| |||||||| ||||| ||||| ||||||| |||||||||||||||    
T  8368006 gcaaaaccaaaagtgctctatactacagagggtaaagacctattaacccttt 8368057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 10976772 - 10976815
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttatttaaa 205  Q
    |||||||||||||||||||| ||||||||||||| | |||||||    
T  10976772 cctatattacagggggtaaagacctattaaccctataatttaaa 10976815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 11890101 - 11890155
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||  |||||||||||    
T  11890101 acagggggcaaaaccaaaagtgacctatattaca-ggggtaaaggcctattaaccc 11890155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 42004057 - 42003990
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaagga 116  Q
    ||||||| ||||||||||||||||  ||||| |||||||||   | ||||||||| ||||||||||||    
T  42004057 cacatcaaagattctgctgagtcaatgggcttagggggcaaatctaaagaatctttattttacaagga 42003990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 10011725 - 10011683
Alignment:
Q  83 ggggcaatcttgaagaatcttcattttacaaggacggaatcta 125  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||    
T  10011725 ggggcaatcgtgaagaatctttattttataaggacggaatcta 10011683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 15395589 - 15395543
Alignment:
Q  149 aaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||||||    
T  15395589 aaaccaaaagtgacctattttacagggggtaaaaacctattaaccct 15395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 25962857 - 25962791
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttatttaaa 205  Q
    |||||||| |||||  ||| || ||||||||||||||||||||   |||||||||||||| ||||||    
T  25962857 acagggggtaaaaccgaaaatgacctatattacagggggtaaaacactattaacccttttttttaaa 25962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 34407904 - 34407950
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||| ||||||| | ||||||||||||||||||||||| |||||||    
T  34407904 aaaaccaaaagtgacttatattacagggggtaaataccttttaaccc 34407950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 35599368 - 35599330
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg 177  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  35599368 acagggggcaaaaccaaaagtgacctatattacaggggg 35599330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 38482350 - 38482316
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  38482350 cctatattacagggggtaaagacctattaaccctt 38482316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 9750503 - 9750446
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattac-agggggtaaatacctattaaccct 195  Q
    ||||||| |||||| ||||||| |||||||||| ||||||||||  ||||||||||||    
T  9750503 acaggggacaaaaccaaaagtgacctatattacaagggggtaaaggcctattaaccct 9750446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 10012810 - 10012863
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||| |||||| |||||| ||||||||||||| || |||| ||||||||||||    
T  10012810 aggggacaaaaccaaaagtaccctatattacagaggataaagacctattaaccc 10012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 18254370 - 18254427
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||| ||||| |||| || |||||||||||||||||||||  | ||||||||||    
T  18254370 acaggggggaaaacaaaaaatgacctatattacagggggtaaatcaccattaaccctt 18254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 22551554 - 22551521
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  22551554 cctatattacagggggtaaagacctattaaccct 22551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 889123 - 889067
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||| || ||||| ||| ||| ||||||||||| |||||||| |||||||||||||    
T  889123 acaggagggaaaaccaaatgtggcctatattacaaggggtaaagacctattaaccct 889067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 12399611 - 12399643
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  12399611 cctatattacagggggtaaagacctattaaccc 12399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 26888459 - 26888515
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| ||||||||| || |||||||   |||||||||||    
T  26888459 acagggggcaaaaccaaaagtgacctatattatagagggtaaaacactattaaccct 26888515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 31312796 - 31312840
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttatttaaaa 206  Q
    ||||||||||||||||||||   |||||||||||||||| |||||    
T  31312796 cctatattacagggggtaaaacactattaacccttttatctaaaa 31312840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 35600544 - 35600600
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttt 198  Q
    |||||||||| ||||||| ||||||||||| |||||||||  |||||||||| ||||    
T  35600544 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccttttt 35600600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 5e-51; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 20962349 - 20962191
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                
T  20962349 atgtaggcgccacatcatagattctgctgagtcacagggctcaggaggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaattttt 20962250  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||| ||||||||| |||||||||||||||||| | |||||||||||||    
T  20962249 acagggggcaaaaccaaaagtgccatatattacagggggtaaagatctattaacccttt 20962191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 34740044 - 34739887
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  34740044 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaattttttt 34739945  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  34739944 acaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 34739887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 29248389 - 29248240
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||| |||    
T  29248389 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaataaatttacagcggg 29248290  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
     ||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  29248289 taaaaccaaaagtgtcctatattacagggggtaaagacctattaaccctt 29248240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 39 - 191
Target Start/End: Original strand, 34741295 - 34741448
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  34741295 atgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaatttt 34741394  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaa 191  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  34741395 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaa 34741448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 20963601 - 20963757
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||                
T  20963601 atgtaggtgccacatcatagattctgctgagtcacagggctcaggggacaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaattt 20963700  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 194  Q
    |||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||    
T  20963701 acagggggcaaagccaaaagtgccctatattacaggggggtaaagacctattaaccc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 29249611 - 29249769
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||                
T  29249611 atgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaaaaattt 29249710  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    |||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||||||    
T  29249711 acagggggcaaaaccaaaagttccctatattacaggggggtaaagacctattaaccctt 29249769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 49 - 194
Target Start/End: Original strand, 12566850 - 12566996
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||            ||||||||||    
T  12566850 cacatcatagattcagctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaagaaacaaattttacagggggca 12566949  T
Q  149 aaactaaaagtgccctatattac-agggggtaaatacctattaaccc 194  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||    
T  12566950 aaaccaaaagtgccctatattacaagggggtaaagacctattaaccc 12566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 39 - 197
Target Start/End: Original strand, 50881325 - 50881482
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| | ||||||||| ||||||||||||||||||||| ||||||||||||                
T  50881325 atgtaggtgccacatcaaagattctgctgagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaatgacggaatctaa-ttttttttttt 50881423  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  50881424 acagggggcaaaaccaaaagtggcctatattacagggggtaaagacctattaacccttt 50881482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 54554529 - 54554380
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||| |||||||||||||| |  ||||| ||| ||||||| ||||| | |||||||||||||||||| |||||||            ||||||||    
T  54554529 gccacatcaaagattctgctgagttaatgggcttaggtggcaatcgtgaagga-cttcattttacaaggacgaaatctaaaaacaaaatattacaggggg 54554431  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  54554430 caaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 54554380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 46427158 - 46427230
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  46427158 cacatcatagattctgctgagtcacagggctcagggggcaatcttgatgaatctttattttataaggacggaa 46427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 55499406 - 55499319
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  55499406 atgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatctaa 55499319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 50880053 - 50879976
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  50880053 cacatcatagattctgctgagtcacaaggctcagggggcaatcctgaaaaatctttattttaccaggacggaatctaa 50879976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 55500306 - 55500464
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aannnnnnnnnnn 137  Q
    ||||||| ||||||||| |||||||||| |||||  ||||| ||||||||||| |||||||||||||||||||| ||| ||||||| ||               
T  55500306 atgtaggtgccacatcaaagattctgcttagtcaacgggcttagggggcaatcgtgaagaatcttcattttacagggatggaatctaaaaaaaataaaat 55500405  T
Q  138 nacagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
     |||||||||||||| |||| || ||||||||||| ||||||||| |||||||||||||    
T  55500406 tacagggggcaaaaccaaaaatgtcctatattacaggggggtaaagacctattaaccct 55500464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 43537596 - 43537519
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43537596 cacatcaaagattctgctgagtcacaaggcatagggggcaatcctgaagaatctttattttacaaggacggaatctaa 43537519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 43537752 - 43537826
Alignment:
Q  52 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||| || |||||| |||||||||||||||    
T  43537752 atcatagattctgctgagtcatatggctcagggggcaatcctgaagaatttttattttagaaggacggaatctaa 43537826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 51752812 - 51752686
Alignment:
Q  65 ctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccct 164  Q
    ||||||||  ||||| | ||||||||| ||||||||||||||||||||||||||||||||||            |||||||||||||  ||||||| | |    
T  51752812 ctgagtcaatgggcttatggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttattttttttacagggggcaaaatcaaaagtgtcat 51752713  T
Q  165 atattacagggggtaaatacctattaa 191  Q
    ||||||||||||||||| |||||||||    
T  51752712 atattacagggggtaaagacctattaa 51752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 2438389 - 2438320
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||| |||||||||||| |||||||||    
T  2438389 agattctgctgagtcataggggtcagggagcaatcctgaagaatctttattttacaaggatggaatctaa 2438320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 40479442 - 40479574
Alignment:
Q  63 tgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgcc 162  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||||| |||            |||| || |||||| |||||| ||    
T  40479442 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtacc 40479541  T
Q  163 ctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||| || |||  |||||||||||||    
T  40479542 ctatattacagaggataatgacctattaaccct 40479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 21994441 - 21994328
Alignment:
Q  78 ctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacaggggg 177  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||            ||||||| |||||  ||||||| ||||||||||||||||    
T  21994441 ctcagggggcaatcctaaagaatctttattttacaaggacggaatctaa--aaaaaaaattacaggggacaaaatcaaaagtgtcctatattacaggggg 21994344  T
Q  178 taaatacctattaacc 193  Q
    |||| |||||||||||    
T  21994343 taaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 51754118 - 51754187
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| || ||||||| |||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  51754118 agattttgttgagtcatagggatcatggggcaatcctgaagaatctttattttacaaggacggaatctaa 51754187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 37600951 - 37600875
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc 123  Q
    ||||||||| |||||||||||||||| ||| || || || ||||| | ||||||||| |||||||||||||||||||    
T  37600951 gccacatcagagattctgctgagtcataggacttagaggccaatcctaaagaatctttattttacaaggacggaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 550724 - 550673
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  550724 ggggcaaaactaaaaatgacctatattacagggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 34027196 - 34027251
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||    
T  34027196 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 54555353 - 54555408
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||||| |||||||||||||||||| || |||||||||    
T  54555353 acagggggcaaaaccaaaagtgccatatattacagggggtaaagacttattaaccc 54555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 43860923 - 43860973
Alignment:
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  43860923 caaaaccaaaagtgccctatattacaggaggtaaagacctattaacccttt 43860973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 9410137 - 9410076
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacg 118  Q
    |||||||||||||||| |||| ||||||||||||  |||||||| || ||||||||||||||    
T  9410137 agattctgctgagtcataggggtcagggggcaatactgaagaatatttattttacaaggacg 9410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 49630509 - 49630586
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| | ||||||||||||||  |  || |||| |||||| |||| |||||||||||||||||||||||||||||    
T  49630509 cacatcaaaaattctgctgagtcaatgatcttagggtgcaatcgtgaaaaatcttcattttacaaggacggaatctaa 49630586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 14183729 - 14183609
Alignment:
Q  76 ggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacaggg 175  Q
    |||||||||||||||  ||||||||||| ||||||| |||||| |||||||            |||| | ||||||| ||||||||||||||||| ||||    
T  14183729 ggctcagggggcaattatgaagaatcttgattttacgaggacgaaatctaaatttatttttttacagagagcaaaaccaaaagtgccctatattagaggg 14183630  T
Q  176 ggtaaatacctattaaccctt 196  Q
    ||||||   ||||||||||||    
T  14183629 ggtaaaacactattaaccctt 14183609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 17695884 - 17696012
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    ||||||| | ||||||||||||||  || ||  || ||||||| ||||||||||||||||||||| |||| |||||||            ||||||||||    
T  17695884 cacatcaaatattctgctgagtcaatggacttcggtggcaatcgtgaagaatcttcattttacaatgacgaaatctaaaataaaaaaattacagggggca 17695983  T
Q  149 aaactaaaagtgccctatattacaggggg 177  Q
    |||| ||||||| | ||||||||||||||    
T  17695984 aaaccaaaagtgtcttatattacaggggg 17696012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 9136406 - 9136465
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||    
T  9136406 acagggggcaaaaccaaaagtgatctatattacaggggataaatgcctattaaccttttt 9136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 46426216 - 46426169
Alignment:
Q  79 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  46426216 tcagtgggcaattttgaagaatctttattttacaaggacggaatctaa 46426169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 20125443 - 20125481
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttat 200  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20125443 cctatattacagggggtaaagacctattaacccttttat 20125481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 7533727 - 7533658
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  7533727 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 7533658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 9410200 - 9410269
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| |||||||| ||||  |||||||||||  ||||||||||| |||||||||||| | |||||||    
T  9410200 agattctactgagtcataggggacagggggcaatactgaagaatctttattttacaaggatgaaatctaa 9410269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 15695096 - 15695165
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||   |||| ||||| ||||| ||||||||||||||||||| |||||| |||||||    
T  15695096 agattctgctgactcaactggcttaggggacaatcctgaagaatcttcattttacgaggacgaaatctaa 15695165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 35539805 - 35539838
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||||||||||||||||||||||||||    
T  35539805 cctatattacagggggtaaatacctattaaccct 35539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 37421821 - 37421890
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||| | |||| || | |||||||| |||| |||||| |||||||||||| |||||||||    
T  37421821 agattctgctgagttataggggtctgagggcaatcctgaataatctttattttacaaggatggaatctaa 37421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 51164022 - 51164075
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 192  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||  |||||||||    
T  51164022 acagggggcaaaaccaaaagtgacctatattatagggggtaaaggcctattaac 51164075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 21780154 - 21780119
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||||| |||||||||||||||    
T  21780154 cctatattacagggggtaaagacctattaacccttt 21780119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 22272962 - 22272927
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||||||||| |||||||||||||||    
T  22272962 cctatattacagggggtaaaaacctattaacccttt 22272927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 38656066 - 38656117
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctttta 199  Q
    ||||| |||| || ||||||||| |||||||||| |||||||||||||||||    
T  38656066 aaaacaaaaaatgacctatattatagggggtaaagacctattaaccctttta 38656117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 48029469 - 48029411
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||| |||| || |||| |||||||||||||||  |||||||||||||||    
T  48029469 acagggggcaaaaccaaaa-tgacctaaattacagggggtaaaggcctattaaccctttt 48029411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 49629779 - 49629701
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||| |||||||||||| ||| | ||||| || || |||| ||||||||||| ||||||| ||||||||||||||    
T  49629779 gccacgtcagagattctgctgactcaaatggctc-ggaggaaatcctgaagaatctttattttaccaggacggaatctaa 49629701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 50138543 - 50138488
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||| |||||  ||| || |||||||||||||||||||| ||||||||||||    
T  50138543 acagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 51754210 - 51754261
Alignment:
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||| |||||| |||||||||||||||||||||   ||||||||||||||    
T  51754210 caaaaccaaaagtaccctatattacagggggtaaagctctattaaccctttt 51754261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 54555259 - 54555338
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||| ||||| |||| | ||| |||||||  ||||||||| ||||||||||| |||||||||||||  |||||||    
T  54555259 gccacgtcagagattttgcttactcaaagggctcgaggggcaatcgtgaagaatctttattttacaaggacataatctaa 54555338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 15694571 - 15694529
Alignment:
Q  84 gggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||    
T  15694571 gggcaatcctgaagaatcttcattttacgaggaccgaatctaa 15694529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 24215766 - 24215800
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  24215766 cctatattacagggggtaaagacctattaaccctt 24215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 50879962 - 50879908
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||| ||||||| ||||||| |||||||||||||  ||||| |||||||||||||    
T  50879962 agggagcaaaaccaaaagtggcctatattacaggaagtaaagacctattaaccct 50879908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 7535347 - 7535416
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | |||||  |||| ||||||||||||||||| |||||  |||||||||    
T  7535347 agattctgctgagtcattggggtgaggggctaatcctgaagaatcttcatttttcaagggtggaatctaa 7535416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 11563542 - 11563575
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  11563542 cctatattacagggggtaaagacctattaaccct 11563575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 11861951 - 11861902
Alignment:
Q  146 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||| |||||||| |||||||||||||||||||  || |||||||||    
T  11861951 gcaaaaccaaaagtgctctatattacagggggtaaaggcccattaaccct 11861902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 37273420 - 37273453
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  37273420 cctatattacagggggtaaagacctattaaccct 37273453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 50727622 - 50727589
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  50727622 cctatattacagggggtaaaaacctattaaccct 50727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 50735636 - 50735603
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  50735636 cctatattacagggggtaaaaacctattaaccct 50735603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 52264545 - 52264512
Alignment:
Q  93 tgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||| ||||||||||||||||||||||    
T  52264545 tgaagaatcttgattttacaaggacggaatctaa 52264512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 9001475 - 9001443
Alignment:
Q  163 ctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||||||||||| |||||||||||||    
T  9001475 ctatattacagggggtaaaaacctattaaccct 9001443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 9410284 - 9410340
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 194  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||   ||||||||||    
T  9410284 acaggggacaaaaccaaaagtgccctatattacagaggggtaaaacactattaaccc 9410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 11862028 - 11862084
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| |||||||  ||||||||||  |||||||  ||||||||||||    
T  11862028 acagggggcaaaaccaaaagtgttctatattacaaagggtaaaggcctattaaccct 11862084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 12352470 - 12352514
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaac 192  Q
    ||||| ||||||| ||||||||||||||||||||  |||||||||    
T  12352470 aaaaccaaaagtgacctatattacagggggtaaaggcctattaac 12352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 13128436 - 13128484
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| ||||||| ||||||||| || |||||||| |||||||||||||    
T  13128436 aaaaccaaaagtgacctatattatagagggtaaatgcctattaaccctt 13128484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 16493550 - 16493502
Alignment:
Q  162 cctatattacagggggtaaatacctattaacccttttatttaaaactca 210  Q
    ||||||||||||| |||||| |||||||||||||| | ||||| |||||    
T  16493550 cctatattacaggaggtaaagacctattaacccttgtttttaatactca 16493502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 17289980 - 17290032
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||| ||||| |||| || ||||||||| |||||||||| |||||||||||    
T  17289980 aggggggaaaacaaaaaatgacctatattatagggggtaaagacctattaacc 17290032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 20613021 - 20612969
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaa 191  Q
    |||||||| ||||| ||||||| |||||||| |||||||||||  ||||||||    
T  20613021 acaggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaa 20612969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 41331824 - 41331768
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||| || ||||| ||||||| |||||||| |||||| |||| |||||||||||||    
T  41331824 acaggaggaaaaaccaaaagtgacctatattgcaggggataaagacctattaaccct 41331768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 24235532 - 24235690
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||                
T  24235532 atgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaaaataaattttt 24235631  T
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccctt 196  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  24235632 acagggggcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccctt 24235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 22056638 - 22056482
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||                
T  22056638 atgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaattt 22056539  T
Q  139 acagggggcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccc 194  Q
    |||||||||||||| |||||||||||||||||||||| | |||| ||||||||||||    
T  22056538 acagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 22056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 22058180 - 22058336
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||                
T  22058180 atgtaggtgccacatcatagattctgctgagtcatagggctcaaggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaagaattt 22058279  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  22058280 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 22058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 49 - 196
Target Start/End: Complemental strand, 24234475 - 24234327
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||    
T  24234475 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggca 24234376  T
Q  149 aaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    |||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  24234375 aaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 24234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 56014 - 56170
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||                
T  56014 atgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaacgacggaatctaaaaaaaaaaaatt 56113  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  56114 acaggggacaaaatcaaaagtgccctatattacagggggtaaagacctattaaccct 56170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 24914586 - 24914456
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  24914586 gccacatcatagattctgctgagtcacaggacttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacaggggg 24914487  T
Q  147 caaaactaaaagtgccctatattacaggggg 177  Q
    |||||  ||||||| ||||||||||||||||    
T  24914486 caaaatcaaaagtgtcctatattacaggggg 24914456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 12322713 - 12322862
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||            ||||||||    
T  12322713 gccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaa-aaaaaaaaattacaggggg 12322811  T
Q  147 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    |||||  ||||||||||||||||||| ||||||||| ||||||||||||||    
T  12322812 caaaatcaaaagtgccctatattacaggggggtaaagacctattaaccctt 12322862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 194
Target Start/End: Complemental strand, 54961 - 54807
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    |||||||  |||||||| ||||||||||||||||  | ||| ||||||||||| |||| |||||||||||||||||||||||||||||                
T  54961 atgtaggtaccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaataatcttcattttacaaggacggaatctaatttttttttttt 54862  T
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||||| |||||| ||||||| ||||||||||||| || ||| ||||||||||||    
T  54861 acaggggacaaaaccaaaagtgtcctatattacaggagg-aaagacctattaaccc 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 12321718 - 12321560
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| |||||||||| |||||   |||| | ||||||||| |||||||||||||||||||||||||| ||||||                 
T  12321718 atgtaggtgccacatcaaagattctgctaagtcaataggcttaaggggcaatcgtgaagaatcttcattttacaaggacgaaatctataaaaaaaaaatt 12321619  T
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccctt 196  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||| ||||||||||||||    
T  12321618 acaggaggcaaaaccaaaagtaccctatattacagggggataaagacctattaaccctt 12321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 34762319 - 34762181
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||||||||||||  ||||| ||||||||||  |||||||||||||||||||||||||| ||||||             |||||| ||||||| |||    
T  34762319 agattctgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacgaaatctataaaaaaaaatttacagggagcaaaaccaaa 34762220  T
Q  157 agtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||| |||||| |||||||| ||||    
T  34762219 agtgccctatattacaggaggtaaagacctattagccct 34762181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 5999857 - 5999793
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttac 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  5999857 gccacatcatagattctgctgagtcacagagctcagggggcaatcctgaagaatctttattttac 5999793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 6000582 - 6000657
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 124  Q
    ||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||| |||||||    
T  6000582 cacatcaaagattctgctgagtcacagggcatagggggcaatcctgaagaatctttattttacaaggatggaatct 6000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 14328648 - 14328703
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  14328648 acagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 14421658 - 14421713
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  14421658 acagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14421713  T

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Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 33483833 - 33483696
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||||||||||||  ||||| ||| ||||||  |||| |||||||||||||||||||||||||| ||            |||| ||||||||| |||    
T  33483833 agattctgctgagtcaatgggcttaggtggcaattgtgaataatcttcattttacaaggacggaatc-aaatttttttttttacagagggcaaaaccaaa 33483735  T
Q  157 agtgccctatattacaggg-ggtaaatacctattaaccc 194  Q
    |||| |||||||||||||| |||||| ||||||||||||    
T  33483734 agtgtcctatattacagggtggtaaagacctattaaccc 33483696  T

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Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 3063489 - 3063542
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  3063489 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccctt 3063542  T

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Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 198
Target Start/End: Original strand, 11425688 - 11425829
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    |||||||||| ||| | |||| | |||||| |||||||| ||||||| ||||||||| |||||||| |||            ||||| || |||||||||    
T  11425688 agattctgctaagtgataggggttagggggtaatcttgatgaatctttattttacaaagacggaatttaaaaaaaatattttacaggagggaaaactaaa 11425787  T
Q  157 agtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||||||||||| ||||   ||||||||||||||    
T  11425788 agtgccctatattacaggggataaaacactattaaccctttt 11425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 33485017 - 33485115
Alignment:
Q  79 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacaggggg 177  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |            |||||||||||||| |||||| |||||||||||||||||    
T  33485017 tcagggggcaatcctgaagaatctttattttacaaggacggaattttaaaaaaaaaatttacagggggcaaaaccaaaagtaccctatattacaggggg 33485115  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 14327424 - 14327370
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| ||||||| | ||||||||||||||||||  ||||||||||    
T  14327424 acagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14327370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 14420434 - 14420380
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 193  Q
    |||||||||||||| ||||||| | ||||||||||||||||||  ||||||||||    
T  14420434 acagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14420380  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 31851813 - 31851752
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttat 200  Q
    |||||||| |||||  ||| || ||||||||||||||| |||| ||||||||||||||||||    
T  31851813 acaggggggaaaaccgaaaatgacctatattacaggggataaagacctattaacccttttat 31851752  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 16129539 - 16129485
Alignment:
Q  149 aaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 203  Q
    |||| ||||||| | |||||||||||||||||| || ||||||||||||| ||||    
T  16129539 aaaccaaaagtgacatatattacagggggtaaagacttattaaccctttttttta 16129485  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 22366235 - 22366277
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||    
T  22366235 aaaagtgacctatattgcagggggtaaagacctattaaccctt 22366277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 29942468 - 29942502
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  29942468 cctatattacagggggtaaagacctattaaccctt 29942502  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 6759106 - 6759073
Alignment:
Q  93 tgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||| ||||||||||||||||||||||    
T  6759106 tgaagaatctttattttacaaggacggaatctaa 6759073  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 11424895 - 11424830
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 122  Q
    |||||| ||||||||| |||  | ||||| ||||| ||||||||||| |||||||||||| |||||    
T  11424895 agattcagctgagtcataggagttaggggacaatcctgaagaatctttattttacaaggatggaat 11424830  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 22574056 - 22574089
Alignment:
Q  163 ctatattacagggggtaaatacctattaaccctt 196  Q
    ||||||||||||||||||| ||||||||||||||    
T  22574056 ctatattacagggggtaaagacctattaaccctt 22574089  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 6000674 - 6000729
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||| ||||| |||||||| |||||||||||||||||||   |||||||||||    
T  6000674 acaggggg-aaaaccaaaagtgctctatattacagggggtaaagctctattaaccct 6000729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 10344082 - 10344050
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  10344082 cctatattacagggggtaaagacctattaaccc 10344050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 13114430 - 13114398
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  13114430 cctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 22573853 - 22573801
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||| ||||| |||| || ||||||||| |||||||||| |||||||||||||    
T  22573853 ggggaaaaacaaaaaatgacctatattatagggggtaaagacctattaaccct 22573801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 23270226 - 23270266
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||||| ||||||||| |||||||||| ||||||||||||    
T  23270226 aaaagtgacctatattaaagggggtaaagacctattaaccc 23270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 24387786 - 24387818
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  24387786 cctatattacagggggtaaagacctattaaccc 24387818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 30409671 - 30409727
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||| ||||| ||||||| |||||||| |||| ||||||  ||||||||||||    
T  30409671 acaggggggaaaaccaaaagtgacctatattgcaggaggtaaaggcctattaaccct 30409727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 2e-47; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 17764601 - 17764757
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  17764601 atgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaatttttttt 17764700  T
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 194  Q
    |||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||    
T  17764701 acagggggcaaaaccaaaagtgccctatattacagtggagtaaagacctattaaccc 17764757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 17763484 - 17763335
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  17763484 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacaggggg 17763385  T
Q  147 caaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 195  Q
    |||||| ||||||| |||||||||||| |||||||| |||||||||||||    
T  17763384 caaaaccaaaagtgtcctatattacagaggggtaaagacctattaaccct 17763335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 48170163 - 48170250
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48170163 atgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 48170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 34158203 - 34158054
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||             |||||||||    
T  34158203 cacatcatagattctgctgagtcacagggatctgggggcaatcttgaagaatcttcattttacaaggacggaatctaa-tttttttttttncagggggca 34158105  T
Q  149 aaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttt 198  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  34158104 aaaccaaaagtgccctatattacaggggggtaaagacctattaaccctttt 34158054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 39 - 198
Target Start/End: Original strand, 9554161 - 9554321
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||||||||| ||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||                
T  9554161 atgtaggtgccacatcatagattatgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttttttttt 9554260  T
Q  139 acagggggcaaaactaaaagtgccctatattacagg-gggtaaatacctattaaccctttt 198  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |  |||||||||||||    
T  9554261 acagggggcaaaaccaaaagtgccctatattacaggagggtaaagatttattaaccctttt 9554321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 1831892 - 1832045
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 148  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||            |||||||| |    
T  1831892 cacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatctttattttacaaggatagaatctaaaaaaaaaaatttacaggggg-a 1831990  T
Q  149 aaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 203  Q
    |||  ||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  1831991 aaatcaaaagtgccctatattacagggggtaaagccctattaaccctttaattta 1832045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 196
Target Start/End: Complemental strand, 9553546 - 9553398
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aannnnnnnnnnnnacagggggc 147  Q
    ||||||| ||||| |||||||| |  ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||            ||||| |||    
T  9553546 cacatcaaagattatgctgagttattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataatttacaggaggc 9553447  T
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  9553446 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 9553398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 1830959 - 1830811
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||            ||| ||||    
T  1830959 gccacaccatagattctgctaagtcacagggctcagggagcaatcttgaagaatctttattttacaaagacggaatctaaaaaaaaaaatttacaagggg 1830860  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
     ||||  ||||||  ||||||||||||||||||||  ||||||||||||    
T  1830859 gaaaatcaaaagtatcctatattacagggggtaaagccctattaaccct 1830811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 25776407 - 25776494
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||| ||||||||||||||||  ||||| ||||||||||  |||||||| |||||||||||||||||||||||||    
T  25776407 atgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaattttcattttacaaggacggaatctaa 25776494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 11056880 - 11056803
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 124  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11056880 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 11056803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 48168971 - 48168915
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttca 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48168971 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatgttca 48168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 13772551 - 13772629
Alignment:
Q  49 cacatcatagattctgctga-gtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  13772551 cacatcattgattctgctgaagtcacagagctcagggggtaatcttgaagaatctttattttacaaggatggaatctaa 13772629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 48168905 - 48168847
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  48168905 acagggggcaaaaccaaaagtgccctatattacagagggtaaagacctattaacccttt 48168847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 24436305 - 24436374
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| | || ||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  24436305 agattctgctgagtcatatgggtcagggggcaatcctgaggaatctttattttacaaggacggaatctaa 24436374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 35891144 - 35891075
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||| |||| |||||||    
T  35891144 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaagacgaaatctaa 35891075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 1594127 - 1594184
Alignment:
Q  140 cagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  1594127 caggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaacccttt 1594184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 21237349 - 21237404
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||    
T  21237349 agggggcaaaaccaaaagtgacctatattatagggggtaaatgcctattaaccctt 21237404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 33767303 - 33767378
Alignment:
Q  51 catcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||||| ||||||||||  ||||| ||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  33767303 catcaaagattgtgctgagtcaatgggcttaggggacaatcgtgaagaatcttaattttacaaagacggaatctaa 33767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 47637853 - 47637794
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaagga 116  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||| ||||||||||||    
T  47637853 agattctgatgagtcataggggtcagggggcaatcatgaagaatctttattttacaagga 47637794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 13771706 - 13771629
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| |||||||||||||||| || ||  | ||||||||||||||||||||| |||||| ||| ||| |||||||    
T  13771706 cacatcaaagattctgctgagtcatagtgcatatggggcaatcttgaagaatctttattttataagaacgaaatctaa 13771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 42509040 - 42509097
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| |||||||||||||||||||| |||||||   ||||||||||||    
T  42509040 acagggggcaaaaccaaaagtgccctatattacagagggtaaaacactattaaccctt 42509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 8175004 - 8174888
Alignment:
Q  75 gggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-nnnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacag 173  Q
    ||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||             |||||  ||||||| |||| |||||||||||||||    
T  8175004 gggcttaggggacaatcgtgaagaatcttcattttacaaagacggaatctaatttttttttttttacaggatgcaaaaccaaaaatgccctatattacag 8174905  T
Q  174 ggggtaaatacctatta 190  Q
    |||||||| ||||||||    
T  8174904 ggggtaaagacctatta 8174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 11056781 - 11056725
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccctttt 198  Q
    |||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||    
T  11056781 ggggcaaaaccaaaagtgccttatattacaggggggtaaagacctattaaccctttt 11056725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 48945235 - 48945181
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||||||| |||| || |||||||||||| ||||||| |||||||||||||||    
T  48945235 ggggcaaaaccaaaaatgacctatattacagagggtaaaaacctattaacccttt 48945181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 6269574 - 6269525
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 197  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||||||    
T  6269574 aaaactgaaaatgacctatattacagggggtaaagacctattaacccttt 6269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 24434963 - 24434906
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 195  Q
    |||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  24434963 acagagggcaaaacgaaaagtgcccgatattacaggggggtaaagacctattaaccct 24434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 33757463 - 33757402
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattt 202  Q
    |||||| ||||  ||||||| |||||||||||||||||||| | ||||||||||||| ||||    
T  33757463 aggggggaaaatcaaaagtgacctatattacagggggtaaagatctattaaccctttaattt 33757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 47638737 - 47638806
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| || ||||||| | || ||||| ||||||| ||||||||||| |||||||||| |||||||||||    
T  47638737 agattttgttgagtcatatggatcaggaggcaatcctgaagaatctttattttacaagtacggaatctaa 47638806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 5219038 - 5219098
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttt 198  Q
    |||||||||||||  ||||||| ||||||||||| |||||||||  |||||||||||||||    
T  5219038 acagggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccctttt 5219098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 14554450 - 14554506
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||| ||||| |||| || ||||||||||||||||||||  ||||||||||||    
T  14554450 acaggggggaaaacaaaaaatgacctatattacagggggtaaaggcctattaaccct 14554506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 19272460 - 19272508
Alignment:
Q  148 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    ||||| |||| || |||||||||||||||||||| ||||||||||||||    
T  19272460 aaaaccaaaaatgacctatattacagggggtaaagacctattaaccctt 19272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 48896527 - 48896475
Alignment:
Q  146 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||| |||||    
T  48896527 gcaaaaccaaaagtgacctatattacaggaggtaaagacctattaactctttt 48896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 8175894 - 8175956
Alignment:
Q  63 tgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||| |||| ||||||| ||||| |||||||||   ||||||||||||||||||||||    
T  8175894 tgctgagtcataggggtcagggg-caatcctgaagaatcactattttacaaggacggaatctaa 8175956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 9113410 - 9113343
Alignment:
Q  59 attctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||| |||  ||| | ||||| ||||||||||||||||||||||| |||||  |||||||||    
T  9113410 attctgctgactcattggggtgaggggccaatcttgaagaatcttcatttttcaagggtggaatctaa 9113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 13279419 - 13279474
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    |||||||| |||||  ||| || |||||||||||||||||||| ||||||||||||    
T  13279419 acagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 126
Target Start/End: Complemental strand, 24435011 - 24434980
Alignment:
Q  95 aagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||||||||||||||||||    
T  24435011 aagaatcttcattttacaaggacggaatctaa 24434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 1589441 - 1589403
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg 177  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  1589441 acagggggcaaaaccaaaagtgacctatattacaggggg 1589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 9915683 - 9915649
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  9915683 cctatattacagggggtaaagacctattaaccctt 9915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 9923595 - 9923561
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  9923595 cctatattacagggggtaaagacctattaaccctt 9923561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 23784616 - 23784582
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||||||||| ||||||||||||||    
T  23784616 cctatattacagggggtaaagacctattaaccctt 23784582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 11058092 - 11058161
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| | |  | ||||||||||| |||||||| || |||||||||| || ||||||||    
T  11058092 agattctgctgagtcataagtgtgagggggcaatcatgaagaatttttattttacaagaacagaatctaa 11058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 17238206 - 17238275
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  17238206 agattctgctgactcattggggtgaggggtcaatcctgaagaatcttcatttttcaagggtggaatctaa 17238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 24555926 - 24555959
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  24555926 cctatattacagggggtaaaaacctattaaccct 24555959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 31433559 - 31433628
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  31433559 agattctgctgactcattggggtgaggggtcaatcctgaagaatcttcatttttcaagggtggaatctaa 31433628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 37413832 - 37413787
Alignment:
Q  81 agggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| ||||| ||||||||||||||||| |||||| |||||||||    
T  37413832 aggggtcaatcctgaagaatcttcatttttcaaggatggaatctaa 37413787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 13882635 - 13882599
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  13882635 cctatattacagagggtaaagacctattaaccctttt 13882599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 23371481 - 23371449
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  23371481 cctatattacagggggtaaagacctattaaccc 23371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 24757995 - 24758051
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 196  Q
    |||||||||||| || ||||  |||||||||| ||||||||| ||||||||||||||    
T  24757995 agggggcaaaaccaatagtgatctatattacaggggggtaaagacctattaaccctt 24758051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 26050428 - 26050464
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26050428 cctatattacaggggttaaagacctattaaccctttt 26050464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 26059787 - 26059823
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26059787 cctatattacaggggttaaagacctattaaccctttt 26059823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 35913310 - 35913342
Alignment:
Q  163 ctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||||||||||| |||||||||||||    
T  35913310 ctatattacagggggtaaagacctattaaccct 35913342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 38193219 - 38193251
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  38193219 cctatattacagggggtaaagacctattaaccc 38193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 39580191 - 39580223
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  39580191 cctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 42202201 - 42202161
Alignment:
Q  154 aaaagtgccctatattacagggggtaaatacctattaaccc 194  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  42202201 aaaagtgacctatattgcagggggtaaagacctattaaccc 42202161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 196 - 346
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aannnnnnnnnnnnacagggg 145  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||            |||||||    
T  196 gccacatcatagattctgctgagtcaaagggctcagggggcaatcttgaagaatcttcattttataaggacggaatctaaaaaaaaactttttacagggg 295  T
Q  146 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  296 gcaaaaccaaaagtgccctatattacatgggggtaaagacctattaaccct 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 2889 - 2729
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaagg-acggaatctaannnnnnnnnnn 137  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||               
T  2889 atgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaattttcattt-acaagggacggaatctaaaaaaaaaaatt 2791  T
Q  138 nacagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctttt 198  Q
     ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2790 tacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctttt 2729  T

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Target: scaffold0250 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 10227 - 10076
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 146  Q
    ||||| ||| ||||| ||||||||||  ||| | ||||||||||  ||||||||||||||||||||||||| ||||||||            ||||||||    
T  10227 gccacctcagagattttgctgagtcaatgggattagggggcaattgtgaagaatcttcattttacaaggactgaatctaattttttttttttacaggggg 10128  T
Q  147 caaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 198  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10127 caaaactaaaagtgccctatattacagggggtaaagacctattaaccctttt 10076  T

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Target: scaffold0250; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 11488 - 11557
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  11488 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaatctaa 11557  T

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Target: scaffold0210 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 195
Target Start/End: Complemental strand, 4863 - 4706
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn 138  Q
    ||||||| ||||||||| ||||||||||||||||   | || | ||||||||| ||||||||||||||||||||||||||||||||||                
T  4863 atgtaggtgccacatcaaagattctgctgagtcaattgacttacggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttttttttt 4764  T
Q  139 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  4763 acaggaggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 4706  T

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Target: scaffold0210; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 5794 - 5962
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta---annnnnnnnn 135  Q
    ||||||| ||||||||| | ||||||||||||||  ||||| ||||||||||| ||||| |||||||||||||||||||||||||||   |             
T  5794 atgtaggtgccacatcaaatattctgctgagtcaatgggcttagggggcaatcgtgaagtatcttcattttacaaggacggaatctataaaaaaaaaaaa 5893  T
Q  136 nnnacagggggcaaaactaaaagtgccctatattacagg-gggtaaatacctattaacccttttattta 203  Q
       ||| |||||||||| ||||||||||||||||||||| | ||||| |||||||||||| ||| ||||    
T  5894 attacaaggggcaaaaccaaaagtgccctatattacaggagtgtaaagacctattaacccattttttta 5962  T

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Target: scaffold0040 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 194
Target Start/End: Complemental strand, 64640 - 64503
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 156  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||            |||||||||||||| |||    
T  64640 agattctgctgagtcacaggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaa-aaaaaaaaattacagggggcaaaaccaaa 64542  T
Q  157 agtgccctatattaca-gggggtaaatacctattaaccc 194  Q
    ||| |||||||||||| ||||||||| ||||||||||||    
T  64541 agtaccctatattacaggggggtaaagacctattaaccc 64503  T

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Target: scaffold0040; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 65962 - 66102
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-nnnnnnnnnnnnacagggggcaaaactaa 155  Q
    ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||             |||||||||||||| ||    
T  65962 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttttttttttacagggggcaaaaccaa 66061  T
Q  156 aagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||| | ||||||||| ||||||||| |||||||||||||    
T  66062 aagtgtcatatattacaggggggtaaagacctattaaccct 66102  T

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Target: scaffold0246 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 16030 - 15947
Alignment:
Q  39 atgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 122  Q
    ||||||| ||||||||||||||| || |||||||  ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  16030 atgtaggtgccacatcatagattttgttgagtcaatgggcttagggggcaatctcgaagaatcttcattttacaaggacggaat 15947  T

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Target: scaffold0246; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 17381 - 17513
Alignment:
Q  63 tgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgcc 162  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||||| |||            |||| || |||||| |||||| ||    
T  17381 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtacc 17480  T
Q  163 ctatattacagggggtaaatacctattaaccct 195  Q
    ||||||||||| || |||  |||||||||||||    
T  17481 ctatattacagaggataatgacctattaaccct 17513  T

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Target: scaffold0246; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 15927 - 15871
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    ||||||| |||||| ||||||| | ||||||||||||| |||| |||||||||||||    
T  15927 acaggggacaaaacaaaaagtgtcatatattacaggggataaagacctattaaccct 15871  T

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Target: scaffold0228 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 8230 - 8081
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc-taannnnnnnnnnnnacagggg 145  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||||||||||| |||            ||| |||    
T  8230 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-ggg 8132  T
Q  146 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  8131 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 8081  T

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Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 15812 - 15663
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc-taannnnnnnnnnnnacagggg 145  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||||||||||| |||            ||| |||    
T  15812 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-ggg 15714  T
Q  146 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  15713 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15663  T

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Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 25764 - 25615
Alignment:
Q  47 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc-taannnnnnnnnnnnacagggg 145  Q
    ||||| ||| ||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||||||||||| |||            ||| |||    
T  25764 gccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-ggg 25666  T
Q  146 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 195  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  25665 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 25615  T

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Target: scaffold0227 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 24857 - 24922
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 122  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  24857 agattttgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaat 24922  T

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Target: scaffold0725 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 3969 - 3912
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 196  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||    
T  3969 acagggggcaaaaccaaaagtgtcctacattacagggggtaaagacctattaaccctt 3912  T

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Target: scaffold0725; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 4958 - 5017
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccctt 196  Q
    |||||||||||||| ||||||| |||||||||||  ||||||||| || |||||||||||    
T  4958 acagggggcaaaaccaaaagtgacctatattacagggggggtaaagacttattaaccctt 5017  T

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Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 20985 - 20908
Alignment:
Q  49 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||| ||||||||||||||||   | || ||||||||||| |||| | |||||||||||||||||||||||||||    
T  20985 cacatcagagattctgctgagtcaatagacttagggggcaatcgtgaaaattcttcattttacaaggacggaatctaa 20908  T

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Target: scaffold0093 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 8967 - 9036
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||| |||||||||| |||| | ||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  8967 agattttgctgagtcataggggttaggaggcaatcctgaagaatctttattttacaaggacggaatctaa 9036  T

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Target: scaffold0093; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 2797 - 2741
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaa 113  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| |||||||||    
T  2797 agattctgctgagtcatagggattagggggcaatcctgaataatctttattttacaa 2741  T

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Target: scaffold0093; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 7420 - 7364
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaa 113  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| |||||||||    
T  7420 agattctgctgagtcatagggattagggggcaatcctgaataatctttattttacaa 7364  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 228588 - 228645
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  228588 acagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 228645  T

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Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 227423 - 227368
Alignment:
Q  141 agggggcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccct 195  Q
    |||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||    
T  227423 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 37335 - 37380
Alignment:
Q  81 agggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  37335 agggggcaatcctgaagaatctttattttacaaggacggaatctaa 37380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 30826 - 30793
Alignment:
Q  93 tgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||| ||||||||||||||||||||||    
T  30826 tgaagaatctttattttacaaggacggaatctaa 30793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 36199 - 36138
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacg 118  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| ||||||||||||||    
T  36199 agattctgctgagtcataggggttagggggcaatcctgaaaaatctttattttacaaggacg 36138  T

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Target: scaffold0112; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 36919 - 36988
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||||||| |||| | ||||||||||| | |||||||   ||||||||||| || |||||||    
T  36919 agattctgctgagtcatagggattagggggcaatcctaaagaatcactattttacaaggtcgaaatctaa 36988  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 35654 - 35598
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||| ||||||| ||||||||  |||||||||| |||||||||||||    
T  35654 acagggggcaaaaccaaaagtgacctatattttagggggtaaagacctattaaccct 35598  T

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Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 638 - 694
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 195  Q
    |||||||| ||||| | || || |||||||||||| ||||||| |||||||||||||    
T  638 acaggggggaaaaccataaatgacctatattacagagggtaaagacctattaaccct 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 91101 - 91041
Alignment:
Q  143 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 203  Q
    |||| ||||||| || || |||||||||||||||||||| |||||||||||||||| ||||    
T  91101 gggggaaaactagaaatgacctatattacagggggtaaagacctattaaccctttttttta 91041  T

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Target: scaffold1571 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 183 - 114
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  183 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 114  T

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Target: scaffold1147 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 2598 - 2529
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  2598 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 2529  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 110465 - 110406
Alignment:
Q  139 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaacccttt 197  Q
    |||||| ||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||    
T  110465 acagggagcaaaaccaaaagtgacatatattacagggggataaatgcctattaacccttt 110406  T

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Target: scaffold0850 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0850
Description:

Target: scaffold0850; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 1589 - 1520
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  1589 agattctgctgactcattggggtgaggggtcaatcctgaagaatcttcatttttcaagggtggaatctaa 1520  T

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Target: scaffold0850; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 4564 - 4633
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  4564 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 4633  T

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Target: scaffold0769 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 4176 - 4209
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccct 195  Q
    |||||||||||||||||||| |||||||||||||    
T  4176 cctatattacagggggtaaagacctattaaccct 4209  T

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Target: scaffold0497 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 1469 - 1538
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| |||  ||| | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  1469 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 1538  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 3540 - 3609
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 126  Q
    |||||||||||| ||| || |||||| || ||||| | ||||||||| |||||||| ||||| |||||||    
T  3540 agattctgctgactcaaagagctcagaggacaatcctaaagaatctttattttacatggacgaaatctaa 3609  T

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Target: scaffold0933 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 2637 - 2697
Alignment:
Q  57 agattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggac 117  Q
    |||||||||||||| | |||| ||| | | ||||| ||||||||||| |||||||||||||    
T  2637 agattctgctgagtgatagggatcatgagacaatcctgaagaatctttattttacaaggac 2697  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 4452 - 4484
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  4452 cctatattacagggggtaaagacctattaaccc 4484  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 34851 - 34883
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  34851 cctatattacagggggtaaagacctattaaccc 34883  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 1859 - 1827
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  1859 cctatattacagggggtaaagacctattaaccc 1827  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 26340 - 26308
Alignment:
Q  162 cctatattacagggggtaaatacctattaaccc 194  Q
    |||||||||||||||||||| ||||||||||||    
T  26340 cctatattacagggggtaaagacctattaaccc 26308  T

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