View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6655_low_2 (Length: 363)
Name: NF6655_low_2
Description: NF6655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6655_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 17 - 358
Target Start/End: Original strand, 43860613 - 43860954
Alignment:
| Q |
17 |
tcttctacccgtaagtacttcccaatttggtttattcttaaactgtaataaaaaatatgaatgaatcaatatgatgctacatgcataaatatgtatagac |
116 |
Q |
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| T |
43860613 |
tcttctacccgtaagcacttcccaatttggtttattcttaaactgtaataaaaaatatgaatgaatcaatatgatgctacatgcataaatatgtatagac |
43860712 |
T |
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| Q |
117 |
tcgtctctagctagcttgataaattactaacagcatctctagtagccaatgtgagtatatcagcacatgaaacaattcctggacatttttcctccaaagc |
216 |
Q |
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| T |
43860713 |
tcgtctctagctagcttgataaattactaacagcatctctagtagccaatgtgagtatatcagcacatgaaacaattcctggacatttttcctccaaagc |
43860812 |
T |
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| Q |
217 |
ttcttttatgtcttctattacatcaaagcctgctaatgataaattaggaatggcatccttctccgccgtgttaccagcagtggactccaacaaaaccgat |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860813 |
ttcttttatgtcttctattacatcaaagcctgctaatgataaattaggaatggcatccttctccgccgtgttaccagcagtggactccaacaaaaccgat |
43860912 |
T |
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| Q |
317 |
gcgtcacacccctgaaacgcaaccatagatattcatctcact |
358 |
Q |
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| T |
43860913 |
gcgtcacacccctgaaacgcaaccatagatatgcatgtcact |
43860954 |
T |
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