View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6655_low_3 (Length: 226)

Name: NF6655_low_3
Description: NF6655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6655_low_3
NF6655_low_3
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-226)||(66062-66285)
scaffold0004 (9-86)||(75915-75991)
scaffold0004 (9-76)||(111347-111414)
scaffold0004 (11-86)||(73065-73139)
[»] chr1 (45 HSPs)
chr1 (1-226)||(17901784-17902009)
chr1 (1-226)||(6834011-6834238)
chr1 (9-221)||(35894949-35895153)
chr1 (109-226)||(21239133-21239250)
chr1 (9-226)||(8306449-8306660)
chr1 (11-220)||(22145666-22145870)
chr1 (135-223)||(7052129-7052217)
chr1 (135-226)||(24723576-24723667)
chr1 (9-211)||(7702973-7703176)
chr1 (123-215)||(21243841-21243933)
chr1 (9-89)||(28476732-28476812)
chr1 (9-226)||(38056670-38056880)
chr1 (9-89)||(50544846-50544926)
chr1 (9-159)||(34392678-34392822)
chr1 (9-73)||(12710857-12710921)
chr1 (11-91)||(16401885-16401963)
chr1 (14-74)||(24719514-24719573)
chr1 (9-71)||(635002-635064)
chr1 (10-87)||(8275988-8276065)
chr1 (9-86)||(45499520-45499596)
chr1 (11-77)||(20588622-20588690)
chr1 (11-77)||(20593160-20593228)
chr1 (1-74)||(24007215-24007287)
chr1 (146-226)||(8276117-8276197)
chr1 (133-226)||(46197860-46197952)
chr1 (135-226)||(21188149-21188240)
chr1 (122-184)||(14792666-14792728)
chr1 (9-63)||(16058312-16058366)
chr1 (122-184)||(44892336-44892398)
chr1 (1-75)||(51336467-51336541)
chr1 (177-226)||(23194669-23194718)
chr1 (177-226)||(45574176-45574225)
chr1 (183-226)||(297202-297245)
chr1 (1-75)||(12327733-12327807)
chr1 (135-201)||(44822246-44822312)
chr1 (177-226)||(13880693-13880742)
chr1 (177-226)||(22130182-22130231)
chr1 (177-226)||(28313195-28313244)
chr1 (133-226)||(50001321-50001413)
chr1 (11-63)||(19676711-19676763)
chr1 (11-63)||(21046049-21046101)
chr1 (1-41)||(29763622-29763662)
chr1 (122-166)||(41225557-41225601)
chr1 (122-166)||(41226810-41226854)
chr1 (1-41)||(46197735-46197775)
[»] scaffold0594 (1 HSPs)
scaffold0594 (9-226)||(2085-2301)
[»] chr6 (42 HSPs)
chr6 (1-226)||(29045109-29045333)
chr6 (122-221)||(25921851-25921950)
chr6 (10-88)||(21683074-21683152)
chr6 (9-86)||(10446195-10446271)
chr6 (9-74)||(23658078-23658143)
chr6 (9-89)||(19825484-19825564)
chr6 (11-74)||(20410512-20410575)
chr6 (9-87)||(18982548-18982626)
chr6 (138-226)||(25601445-25601533)
chr6 (144-209)||(16447896-16447961)
chr6 (144-209)||(21119948-21120013)
chr6 (144-209)||(19102604-19102669)
chr6 (173-226)||(27557509-27557562)
chr6 (10-89)||(15998863-15998942)
chr6 (135-226)||(35057389-35057480)
chr6 (9-87)||(13285724-13285802)
chr6 (135-201)||(18982282-18982348)
chr6 (122-184)||(23431550-23431612)
chr6 (177-226)||(13765193-13765242)
chr6 (177-226)||(20556189-20556238)
chr6 (177-226)||(23226014-23226063)
chr6 (177-226)||(23956709-23956758)
chr6 (177-226)||(31021878-31021927)
chr6 (9-77)||(15890710-15890778)
chr6 (146-226)||(19825614-19825694)
chr6 (122-166)||(23657993-23658037)
chr6 (1-77)||(27329971-27330047)
chr6 (1-77)||(27390711-27390787)
chr6 (51-90)||(34140559-34140598)
chr6 (51-90)||(34153175-34153214)
chr6 (122-184)||(7217346-7217408)
chr6 (122-184)||(22557135-22557197)
chr6 (122-184)||(32259732-32259794)
chr6 (9-63)||(34140454-34140506)
chr6 (9-63)||(34153070-34153122)
chr6 (133-226)||(15891684-15891776)
chr6 (133-226)||(15900769-15900861)
chr6 (177-226)||(25619054-25619103)
chr6 (11-63)||(7827972-7828024)
chr6 (177-209)||(14978698-14978730)
chr6 (11-63)||(23150287-23150339)
chr6 (122-166)||(31734612-31734656)
[»] chr7 (64 HSPs)
chr7 (11-226)||(19282891-19283108)
chr7 (9-226)||(13315080-13315288)
chr7 (69-221)||(38295452-38295603)
chr7 (9-157)||(16250220-16250366)
chr7 (135-226)||(12754781-12754872)
chr7 (135-226)||(47975007-47975098)
chr7 (9-73)||(38299738-38299802)
chr7 (135-226)||(708637-708728)
chr7 (9-74)||(708427-708492)
chr7 (9-74)||(15575647-15575712)
chr7 (9-86)||(20252180-20252257)
chr7 (9-89)||(47095426-47095506)
chr7 (10-89)||(43745630-43745709)
chr7 (9-95)||(8930763-8930845)
chr7 (9-77)||(58411-58479)
chr7 (10-74)||(8488093-8488157)
chr7 (10-74)||(8513752-8513816)
chr7 (9-89)||(19195586-19195665)
chr7 (9-95)||(33556103-33556185)
chr7 (9-77)||(13744508-13744576)
chr7 (9-65)||(18874663-18874719)
chr7 (11-76)||(25943254-25943319)
chr7 (11-64)||(43276744-43276797)
chr7 (9-77)||(36300639-36300707)
chr7 (9-64)||(3287743-3287798)
chr7 (11-86)||(15720757-15720831)
chr7 (144-206)||(48274349-48274411)
chr7 (135-226)||(14274068-14274159)
chr7 (9-76)||(18570634-18570701)
chr7 (22-87)||(831861-831926)
chr7 (22-87)||(1197041-1197106)
chr7 (144-209)||(10063025-10063090)
chr7 (133-226)||(16550117-16550209)
chr7 (133-226)||(16615453-16615545)
chr7 (133-226)||(32160315-32160407)
chr7 (22-87)||(34958321-34958386)
chr7 (10-74)||(4690662-4690726)
chr7 (9-77)||(15700733-15700801)
chr7 (150-226)||(17070421-17070497)
chr7 (135-226)||(37539293-37539384)
chr7 (15-81)||(15700887-15700953)
chr7 (10-89)||(48212726-48212807)
chr7 (177-226)||(4325942-4325991)
chr7 (177-226)||(14105584-14105633)
chr7 (177-226)||(14415601-14415650)
chr7 (177-226)||(44190373-44190422)
chr7 (9-77)||(12127161-12127229)
chr7 (135-226)||(42565948-42566039)
chr7 (122-184)||(9743182-9743244)
chr7 (122-184)||(15119410-15119472)
chr7 (9-63)||(20214147-20214201)
chr7 (9-63)||(20586352-20586406)
chr7 (122-184)||(43276847-43276909)
chr7 (177-226)||(14188450-14188499)
chr7 (177-226)||(16462915-16462964)
chr7 (177-226)||(17505121-17505170)
chr7 (177-226)||(17548044-17548093)
chr7 (177-226)||(25942317-25942366)
chr7 (11-63)||(8851159-8851211)
chr7 (11-63)||(12372274-12372326)
chr7 (11-63)||(12465260-12465312)
chr7 (122-158)||(14160959-14160995)
chr7 (122-166)||(14317977-14318021)
chr7 (1-41)||(29052172-29052212)
[»] chr3 (60 HSPs)
chr3 (9-221)||(12917304-12917515)
chr3 (9-221)||(45803329-45803539)
chr3 (135-226)||(6805043-6805134)
chr3 (9-95)||(22841277-22841363)
chr3 (9-226)||(29907481-29907693)
chr3 (9-226)||(29948647-29948859)
chr3 (9-226)||(29997801-29998013)
chr3 (9-89)||(14641546-14641626)
chr3 (9-89)||(17208498-17208578)
chr3 (10-74)||(14152398-14152462)
chr3 (9-89)||(14520420-14520500)
chr3 (11-95)||(54875474-54875554)
chr3 (9-86)||(6156689-6156764)
chr3 (9-90)||(25202109-25202188)
chr3 (9-77)||(3527155-3527223)
chr3 (11-74)||(5215636-5215699)
chr3 (22-87)||(2247877-2247942)
chr3 (9-95)||(2841504-2841586)
chr3 (9-86)||(6159383-6159459)
chr3 (9-86)||(14442153-14442229)
chr3 (11-76)||(17684835-17684900)
chr3 (11-95)||(17669698-17669778)
chr3 (146-226)||(14641676-14641756)
chr3 (144-209)||(10551167-10551232)
chr3 (9-74)||(15566733-15566798)
chr3 (133-226)||(22652618-22652710)
chr3 (144-209)||(36167394-36167459)
chr3 (9-90)||(48043476-48043555)
chr3 (133-226)||(48631177-48631270)
chr3 (10-86)||(24547178-24547253)
chr3 (177-226)||(42374-42423)
chr3 (133-226)||(16979757-16979849)
chr3 (177-226)||(43549812-43549861)
chr3 (177-226)||(46722743-46722792)
chr3 (177-226)||(55291758-55291807)
chr3 (3-63)||(24177728-24177788)
chr3 (183-226)||(13437085-13437128)
chr3 (115-226)||(13522445-13522555)
chr3 (10-73)||(24548953-24549016)
chr3 (135-201)||(3160742-3160808)
chr3 (51-89)||(13520367-13520405)
chr3 (122-184)||(14152503-14152565)
chr3 (9-63)||(40807996-40808050)
chr3 (9-63)||(44274418-44274472)
chr3 (9-63)||(49900730-49900784)
chr3 (23-77)||(50755266-50755320)
chr3 (122-184)||(53646162-53646224)
chr3 (122-184)||(54330410-54330472)
chr3 (177-226)||(6820016-6820065)
chr3 (177-226)||(10555153-10555202)
chr3 (10-75)||(16050915-16050980)
chr3 (177-226)||(18890270-18890319)
chr3 (177-226)||(18893529-18893578)
chr3 (177-209)||(16643946-16643978)
chr3 (11-63)||(17044966-17045018)
chr3 (11-63)||(17047126-17047178)
chr3 (11-63)||(17541434-17541486)
chr3 (11-63)||(22306583-22306635)
chr3 (177-209)||(24152541-24152573)
chr3 (178-226)||(50350976-50351024)
[»] chr8 (53 HSPs)
chr8 (15-221)||(22483630-22483834)
chr8 (9-172)||(22483829-22483991)
chr8 (9-112)||(22345119-22345218)
chr8 (9-112)||(22356779-22356878)
chr8 (122-226)||(12037267-12037371)
chr8 (9-74)||(22208258-22208323)
chr8 (11-89)||(18816295-18816373)
chr8 (11-89)||(21514665-21514743)
chr8 (51-226)||(36732517-36732691)
chr8 (10-89)||(36732411-36732490)
chr8 (9-95)||(36305966-36306051)
chr8 (9-86)||(21399695-21399771)
chr8 (9-86)||(21794188-21794264)
chr8 (1-74)||(12577869-12577941)
chr8 (22-87)||(18023567-18023632)
chr8 (9-77)||(22610265-22610333)
chr8 (10-89)||(4380616-4380695)
chr8 (11-74)||(22258306-22258369)
chr8 (11-77)||(18834409-18834474)
chr8 (22-76)||(38184923-38184977)
chr8 (144-209)||(26220415-26220480)
chr8 (144-208)||(26222473-26222537)
chr8 (9-87)||(21676498-21676574)
chr8 (9-87)||(21676591-21676667)
chr8 (9-87)||(21678844-21678920)
chr8 (122-184)||(22474643-22474705)
chr8 (132-226)||(25657628-25657721)
chr8 (9-77)||(23884157-23884223)
chr8 (132-210)||(20879334-20879412)
chr8 (130-216)||(22610377-22610463)
chr8 (177-226)||(8413905-8413954)
chr8 (133-226)||(16198681-16198773)
chr8 (133-226)||(19880668-19880760)
chr8 (177-226)||(19882794-19882843)
chr8 (141-201)||(21676713-21676773)
chr8 (135-226)||(20517172-20517263)
chr8 (125-184)||(21579312-21579371)
chr8 (135-226)||(22344968-22345059)
chr8 (135-226)||(22356628-22356719)
chr8 (136-226)||(23478927-23479016)
chr8 (122-184)||(29762971-29763033)
chr8 (177-226)||(20455833-20455882)
chr8 (177-226)||(20460811-20460860)
chr8 (113-166)||(22258402-22258454)
chr8 (177-226)||(23661143-23661192)
chr8 (177-226)||(25483598-25483647)
chr8 (1-41)||(17158953-17158993)
chr8 (177-209)||(17460364-17460396)
chr8 (1-41)||(19880844-19880884)
chr8 (177-209)||(20455114-20455146)
chr8 (177-209)||(20463058-20463090)
chr8 (1-41)||(23479104-23479144)
chr8 (1-41)||(26454730-26454770)
[»] chr2 (36 HSPs)
chr2 (9-213)||(23801351-23801550)
chr2 (49-221)||(12626464-12626634)
chr2 (9-226)||(149499-149713)
chr2 (122-226)||(14179831-14179935)
chr2 (122-226)||(14183569-14183673)
chr2 (135-226)||(1383768-1383859)
chr2 (9-74)||(21315474-21315539)
chr2 (9-74)||(21335264-21335329)
chr2 (1-93)||(34491230-34491322)
chr2 (138-226)||(28652670-28652758)
chr2 (9-74)||(21369282-21369347)
chr2 (10-74)||(23610615-23610679)
chr2 (9-90)||(36734449-36734528)
chr2 (9-77)||(28344986-28345054)
chr2 (132-226)||(19647079-19647173)
chr2 (135-210)||(45535787-45535862)
chr2 (1-63)||(40912320-40912382)
chr2 (9-86)||(20005969-20006045)
chr2 (177-226)||(20590439-20590488)
chr2 (177-226)||(36734610-36734659)
chr2 (9-77)||(24516172-24516240)
chr2 (122-166)||(24717924-24717968)
chr2 (177-225)||(41301086-41301134)
chr2 (183-226)||(23338562-23338605)
chr2 (1-63)||(357881-357943)
chr2 (9-63)||(17307486-17307540)
chr2 (122-180)||(23968726-23968784)
chr2 (144-198)||(24941456-24941510)
chr2 (177-226)||(21072845-21072894)
chr2 (177-226)||(22173134-22173183)
chr2 (133-226)||(25184034-25184126)
chr2 (177-226)||(43707204-43707253)
chr2 (11-63)||(5031129-5031181)
chr2 (1-41)||(21080959-21080999)
chr2 (11-63)||(24780840-24780892)
chr2 (141-201)||(45535666-45535726)
[»] scaffold0148 (1 HSPs)
scaffold0148 (9-226)||(8686-8898)
[»] scaffold0730 (1 HSPs)
scaffold0730 (9-226)||(6503-6711)
[»] scaffold0174 (3 HSPs)
scaffold0174 (11-184)||(11497-11668)
scaffold0174 (9-180)||(5340-5508)
scaffold0174 (9-86)||(19834-19910)
[»] scaffold0086 (4 HSPs)
scaffold0086 (9-172)||(35184-35346)
scaffold0086 (15-172)||(35341-35495)
scaffold0086 (15-90)||(35490-35563)
scaffold0086 (177-226)||(35644-35693)
[»] chr5 (32 HSPs)
chr5 (16-184)||(31621859-31622023)
chr5 (135-226)||(36508859-36508950)
chr5 (9-74)||(18744863-18744928)
chr5 (9-89)||(16063725-16063805)
chr5 (11-74)||(23199207-23199270)
chr5 (9-90)||(20313250-20313329)
chr5 (9-95)||(32607314-32607396)
chr5 (10-89)||(660764-660841)
chr5 (144-209)||(18318326-18318391)
chr5 (144-209)||(20765371-20765436)
chr5 (9-77)||(21398642-21398711)
chr5 (132-221)||(21503989-21504078)
chr5 (9-89)||(6551288-6551368)
chr5 (130-226)||(16063528-16063624)
chr5 (15-65)||(1627071-1627121)
chr5 (145-226)||(21398924-21399005)
chr5 (46-89)||(10774813-10774856)
chr5 (122-184)||(8833309-8833371)
chr5 (133-226)||(17011573-17011665)
chr5 (177-226)||(27868731-27868780)
chr5 (133-226)||(29448685-29448777)
chr5 (177-226)||(33472720-33472769)
chr5 (122-184)||(8503991-8504053)
chr5 (135-201)||(17875927-17875993)
chr5 (9-63)||(21300042-21300096)
chr5 (9-63)||(31622117-31622171)
chr5 (177-226)||(18419298-18419347)
chr5 (177-226)||(24594220-24594269)
chr5 (177-226)||(24668314-24668363)
chr5 (177-226)||(24738083-24738132)
chr5 (177-226)||(24750852-24750901)
chr5 (1-41)||(17011750-17011790)
[»] chr4 (44 HSPs)
chr4 (122-226)||(16296716-16296820)
chr4 (51-226)||(35660733-35660903)
chr4 (135-226)||(14549495-14549586)
chr4 (135-226)||(19434775-19434866)
chr4 (9-89)||(16296912-16296992)
chr4 (9-89)||(14631109-14631189)
chr4 (9-89)||(25513825-25513905)
chr4 (9-226)||(9638854-9639064)
chr4 (9-123)||(10273331-10273437)
chr4 (9-216)||(9622342-9622543)
chr4 (11-74)||(33186892-33186955)
chr4 (11-65)||(12424290-12424344)
chr4 (9-86)||(55583174-55583250)
chr4 (17-89)||(35660930-35661002)
chr4 (10-73)||(26446197-26446260)
chr4 (10-71)||(13847193-13847254)
chr4 (9-74)||(15239814-15239879)
chr4 (144-209)||(14281113-14281178)
chr4 (133-226)||(10694360-10694452)
chr4 (177-226)||(51463185-51463234)
chr4 (144-209)||(54798028-54798093)
chr4 (32-87)||(15747794-15747849)
chr4 (122-184)||(33186789-33186851)
chr4 (122-184)||(33243397-33243459)
chr4 (122-184)||(44023706-44023768)
chr4 (177-226)||(12611757-12611806)
chr4 (22-87)||(17142998-17143063)
chr4 (177-226)||(28386090-28386139)
chr4 (10-73)||(2424386-2424449)
chr4 (9-63)||(15115222-15115276)
chr4 (122-184)||(19566021-19566083)
chr4 (122-184)||(40230193-40230255)
chr4 (122-184)||(46741086-46741148)
chr4 (177-226)||(15344781-15344830)
chr4 (177-226)||(15447534-15447583)
chr4 (177-226)||(16277444-16277493)
chr4 (177-226)||(23802561-23802610)
chr4 (177-226)||(53387054-53387103)
chr4 (11-63)||(11425943-11425995)
chr4 (122-158)||(12623229-12623265)
chr4 (1-41)||(15008985-15009025)
chr4 (11-63)||(25091653-25091705)
chr4 (9-77)||(37019656-37019724)
chr4 (11-63)||(53630474-53630526)
[»] scaffold0048 (2 HSPs)
scaffold0048 (9-166)||(68724-68876)
scaffold0048 (122-184)||(56863-56925)
[»] scaffold0676 (2 HSPs)
scaffold0676 (122-226)||(2659-2763)
scaffold0676 (9-89)||(2855-2935)
[»] scaffold0149 (2 HSPs)
scaffold0149 (138-226)||(21385-21473)
scaffold0149 (9-41)||(21633-21665)
[»] scaffold0026 (2 HSPs)
scaffold0026 (135-226)||(21967-22058)
scaffold0026 (135-184)||(9912-9961)
[»] scaffold0061 (2 HSPs)
scaffold0061 (9-226)||(14584-14793)
scaffold0061 (9-226)||(23642-23851)
[»] scaffold1186 (1 HSPs)
scaffold1186 (9-89)||(1994-2074)
[»] scaffold0007 (4 HSPs)
scaffold0007 (9-206)||(16417-16609)
scaffold0007 (130-206)||(18815-18892)
scaffold0007 (9-72)||(18699-18762)
scaffold0007 (135-226)||(18976-19067)
[»] scaffold0005 (1 HSPs)
scaffold0005 (9-89)||(186194-186274)
[»] scaffold0056 (1 HSPs)
scaffold0056 (10-89)||(18249-18328)
[»] scaffold0220 (2 HSPs)
scaffold0220 (9-74)||(13938-14003)
scaffold0220 (146-226)||(13793-13873)
[»] scaffold0878 (1 HSPs)
scaffold0878 (9-89)||(3420-3500)
[»] scaffold0205 (1 HSPs)
scaffold0205 (9-90)||(5614-5693)
[»] scaffold0035 (2 HSPs)
scaffold0035 (9-86)||(43785-43860)
scaffold0035 (9-90)||(39093-39172)
[»] scaffold0231 (1 HSPs)
scaffold0231 (9-89)||(17519-17599)
[»] scaffold0247 (1 HSPs)
scaffold0247 (11-74)||(1065-1128)
[»] scaffold0040 (1 HSPs)
scaffold0040 (135-226)||(106277-106368)
[»] scaffold0853 (1 HSPs)
scaffold0853 (11-65)||(2454-2508)
[»] scaffold0431 (1 HSPs)
scaffold0431 (11-65)||(5631-5685)
[»] scaffold0031 (1 HSPs)
scaffold0031 (9-95)||(127341-127423)
[»] scaffold0505 (1 HSPs)
scaffold0505 (11-74)||(4926-4988)
[»] scaffold0379 (1 HSPs)
scaffold0379 (11-86)||(10926-10999)
[»] scaffold0328 (2 HSPs)
scaffold0328 (9-89)||(18638-18719)
scaffold0328 (146-226)||(18769-18849)
[»] scaffold0298 (1 HSPs)
scaffold0298 (22-87)||(361-426)
[»] scaffold0256 (1 HSPs)
scaffold0256 (137-209)||(1958-2031)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-70)||(23527-23596)
scaffold0139 (169-221)||(23395-23446)
[»] scaffold0369 (1 HSPs)
scaffold0369 (9-89)||(15614-15693)
[»] scaffold1256 (1 HSPs)
scaffold1256 (10-89)||(2199-2278)
[»] scaffold0414 (1 HSPs)
scaffold0414 (11-95)||(11160-11240)
[»] scaffold0098 (1 HSPs)
scaffold0098 (9-86)||(40085-40161)
[»] scaffold0022 (1 HSPs)
scaffold0022 (144-209)||(117293-117358)
[»] scaffold0203 (1 HSPs)
scaffold0203 (9-89)||(17938-18018)
[»] scaffold0108 (2 HSPs)
scaffold0108 (9-73)||(6408-6472)
scaffold0108 (122-184)||(6303-6365)
[»] scaffold0017 (2 HSPs)
scaffold0017 (9-89)||(26701-26781)
scaffold0017 (135-226)||(26536-26627)
[»] scaffold0819 (1 HSPs)
scaffold0819 (46-89)||(5226-5269)
[»] scaffold0516 (1 HSPs)
scaffold0516 (10-89)||(5304-5383)
[»] scaffold0217 (1 HSPs)
scaffold0217 (135-202)||(28583-28650)
[»] scaffold0555 (2 HSPs)
scaffold0555 (135-221)||(8913-8999)
scaffold0555 (9-70)||(8744-8805)
[»] scaffold0439 (2 HSPs)
scaffold0439 (132-226)||(12086-12179)
scaffold0439 (122-166)||(4326-4370)
[»] scaffold0021 (3 HSPs)
scaffold0021 (135-201)||(16977-17043)
scaffold0021 (135-201)||(26508-26574)
scaffold0021 (122-183)||(169328-169389)
[»] scaffold0213 (1 HSPs)
scaffold0213 (9-74)||(19196-19261)
[»] scaffold0180 (1 HSPs)
scaffold0180 (22-87)||(10572-10636)
[»] scaffold0063 (1 HSPs)
scaffold0063 (122-184)||(62605-62667)
[»] scaffold0046 (1 HSPs)
scaffold0046 (136-226)||(21895-21984)
[»] scaffold0011 (1 HSPs)
scaffold0011 (122-184)||(33341-33403)
[»] scaffold1439 (1 HSPs)
scaffold1439 (177-226)||(922-971)
[»] scaffold0436 (2 HSPs)
scaffold0436 (133-226)||(8805-8897)
scaffold0436 (1-41)||(8982-9022)
[»] scaffold0364 (1 HSPs)
scaffold0364 (177-226)||(8010-8059)
[»] scaffold0138 (3 HSPs)
scaffold0138 (133-226)||(20942-21034)
scaffold0138 (1-41)||(21119-21159)
scaffold0138 (1-41)||(34134-34174)
[»] scaffold0083 (1 HSPs)
scaffold0083 (133-226)||(1782-1874)
[»] scaffold0057 (3 HSPs)
scaffold0057 (177-226)||(72283-72332)
scaffold0057 (133-226)||(69968-70060)
scaffold0057 (1-41)||(69843-69883)
[»] scaffold0034 (1 HSPs)
scaffold0034 (133-226)||(29331-29423)
[»] scaffold1941 (1 HSPs)
scaffold1941 (9-77)||(124-192)
[»] scaffold0151 (1 HSPs)
scaffold0151 (177-225)||(9942-9990)
[»] scaffold0125 (2 HSPs)
scaffold0125 (138-226)||(28397-28485)
scaffold0125 (177-226)||(1207-1256)
[»] scaffold0058 (2 HSPs)
scaffold0058 (177-225)||(39969-40017)
scaffold0058 (135-201)||(59771-59837)
[»] scaffold1939 (1 HSPs)
scaffold1939 (131-197)||(1-67)
[»] scaffold1800 (1 HSPs)
scaffold1800 (135-226)||(451-544)
[»] scaffold0371 (1 HSPs)
scaffold0371 (122-184)||(10549-10611)
[»] scaffold0112 (1 HSPs)
scaffold0112 (9-63)||(2889-2943)
[»] scaffold0039 (1 HSPs)
scaffold0039 (122-184)||(10031-10093)
[»] scaffold0001 (2 HSPs)
scaffold0001 (184-226)||(169286-169328)
scaffold0001 (184-226)||(176639-176681)
[»] scaffold0956 (1 HSPs)
scaffold0956 (177-226)||(2252-2301)
[»] scaffold0401 (1 HSPs)
scaffold0401 (122-183)||(8709-8770)
[»] scaffold0394 (1 HSPs)
scaffold0394 (177-226)||(12896-12945)
[»] scaffold0070 (1 HSPs)
scaffold0070 (177-226)||(8937-8986)
[»] scaffold1633 (1 HSPs)
scaffold1633 (11-63)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (11-63)||(468-520)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-41)||(5051-5091)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-41)||(5051-5091)
[»] scaffold0113 (1 HSPs)
scaffold0113 (177-221)||(35342-35386)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-63)||(78185-78237)
[»] scaffold0032 (1 HSPs)
scaffold0032 (9-89)||(61846-61925)
[»] scaffold0020 (1 HSPs)
scaffold0020 (122-166)||(174126-174170)
[»] scaffold0019 (1 HSPs)
scaffold0019 (11-63)||(24131-24183)


Alignment Details
Target: scaffold0004 (Bit Score: 198; Significance: 1e-108; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 66062 - 66285
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaattta 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  66062 tcatctattctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaattta 66161  T
Q  101 gattgttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaata 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  66162 gattgttgagaaaattaggtttttgaaactaaaattgatt-ttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaata 66260  T
Q  201 atcataggtagagttttctatcaaat 226  Q
    ||||||||||||| ||||||||||||    
T  66261 atcataggtagag-tttctatcaaat 66285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 75991 - 75915
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  75991 tctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 75915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 111414 - 111347
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacat 76  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| ||||| |||| |||||||||||    
T  111414 tctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 111347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 73139 - 73065
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||| |||| ||||||||||| |||||||||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacat-gttgttgtt 73065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 17901784 - 17902009
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaattta 100  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17901784 tcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaacatggttgtttttgttttgttaattta 17901883  T
Q  101 gattgttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaata 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  17901884 gattgttaagaaaattaggtttttgaaactaaaattgattgttgaaagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaata 17901983  T
Q  201 atcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||||    
T  17901984 atcataggtagagttttctatcaaat 17902009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6834238 - 6834011
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaattta 100  Q
    ||||| ||||||||| |||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6834238 tcatctattctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaattta 6834139  T
Q  101 gattgttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatc---tgatgaactaaggtaataattggtgttcaggttgtaga 197  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  6834138 gattgttgagaaaattagg-ttttgaaactaaaattgattgttgaaagagtaggtaatccgatgatgaactaaggtaataattggtgttcaggttgtaga 6834040  T
Q  198 ataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||||||||||||    
T  6834039 ataatcataggtagagttttctatcaaat 6834011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 35895153 - 35894949
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||| |||| ||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||  |||||||    
T  35895153 tctaaggtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaacatg-------ttgttttgttaattttaattgttg 35895061  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||| |||||||||||||| |||||||||||||||||||| | ||||||| |||||| |||||||||||||||||||||||| || ||||||||||| |    
T  35895060 agaaa-ttaggtttttgaaattaaaattgattgttgaaagaattggtaatccgatgaagtaaggtaataattggtgttcaggtggtggaataatcatatg 35894962  T
Q  209 tagagttttctat 221  Q
     ||||||||||||    
T  35894961 aagagttttctat 35894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 21239133 - 21239250
Alignment:
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21239133 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcatagg 21239232  T
Q  209 tagagttttctatcaaat 226  Q
    ||||||||||||||||||    
T  21239233 tagagttttctatcaaat 21239250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 8306660 - 8306449
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    |||| ||||||||| ||| |||  |      
T  8306660 tctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatg----ttgtcgttttgttagttttgatgttat 8306565  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||    
T  8306564 agaaa-ttagggttt-gaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcatagg 8306467  T
Q  209 tagagttttctatcaaat 226  Q
    |  ||||| |||||||||    
T  8306466 ttaagtttcctatcaaat 8306449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 22145666 - 22145870
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgag 110  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| | || |||||||||  |||  |   |||  | ||     
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttgttaggtt--tgaggat--tagat 22145761  T
Q  111 aaaattaggtttttgaaactaaaattg-attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    ||| | |||  || |||| |||||||| ||||||||| ||||||||||||  ||||| ||| |||||||||| |||||| |||||||| |||||||||||    
T  22145762 aaattaagg--ttagaaattaaaattgaattgttgaaggagtaggtaatccaatgaattaaagtaataattgatgttcaagttgtagattaatcataggt 22145859  T
Q  210 agagttttcta 220  Q
    |||||||||||    
T  22145860 agagttttcta 22145870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 7052129 - 7052217
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatca 223  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  7052129 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatca 7052217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 24723576 - 24723667
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  24723576 ttgattgttgaaagagtatgtaatatgatgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaat 24723667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 7703176 - 7702973
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa--gggtttaacatggttgttgttgttttgttaa-tttagattg 105  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||  ||||||  |||||||||||| |||||||||||||||||| ||| | |||    
T  7703176 tctaaggtaagggtgggactagctttctctaataatgagtt-tataatttggaaaaaaagggtttaacatgtttgttgttgttttgttaatttttggttg 7703078  T
Q  106 ttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcat 205  Q
    ||| | ||||||||||||  ||| | || |||||||||||||| ||||||||||  ||| |  |  || | ||||| |||| |||||||||||||||| |    
T  7703077 ttgtg-aaattaggttttgaaaattgaatttgattgttgaaagtgtaggtaatccaatggatcattgtgaaaattgatgtttaggttgtagaataatcct 7702979  T
Q  206 aggtag 211  Q
    ||||||    
T  7702978 aggtag 7702973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 21243841 - 21243933
Alignment:
Q  123 ttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagtt 215  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| || | |||||||||||||||||||||||||||||||||||| ||||||    
T  21243841 ttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttaataattggtgttcaggttgtagaataatcataggcagagtt 21243933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 28476732 - 28476812
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||    
T  28476732 tctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 28476812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 38056670 - 38056880
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| | || ||||     |||||| ||| || ||||     
T  38056670 tctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttg-----ttgttagttttga-tgttt 38056763  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
     |  ||||||| ||| |||  |  ||||| ||| |  |||||||| |||||||||||| || ||||||||||||||| || |||| ||| ||||||||||    
T  38056764 tgggaattagg-tttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcatagg 38056862  T
Q  209 tagagttttctatcaaat 226  Q
    |  ||||| |||||||||    
T  38056863 ttaagtttcctatcaaat 38056880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 50544926 - 50544846
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  50544926 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 50544846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 34392822 - 34392678
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| ||||| |||| ||||||||||    |||||||||||||||| ||| || ||||     
T  34392822 tctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca----tgttgttgttttgttagttttga-tgtta 34392728  T
Q  109 agaaaattaggtttttgaaact--aaaattgattgttgaaagagtaggtaatc 159  Q
       |||||||| ||   ||| |  |||||||||||||||||||||||||||||    
T  34392727 tagaaattagggtt---aaattgcaaaattgattgttgaaagagtaggtaatc 34392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 12710921 - 12710857
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaa 73  Q
    |||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  12710921 tctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaa 12710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 16401963 - 16401885
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtttt 91  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||    
T  16401963 taaggtaagggtgggacta-acttctctaataatgggtt-tataattctgaaatagggtttaacatgtttgttgttatttt 16401885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 24719514 - 24719573
Alignment:
Q  14 ggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24719514 ggtaagggtgg-actagctttctctaataatgggttgtataattctgaaaaagggtttaac 24719573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 635002 - 635064
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggttt 71  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||    
T  635002 tctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 8275988 - 8276065
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    |||||||||||||| |||||| ||| |||||||||| || ||||||||||||||||||||||||| | || |||||||    
T  8275988 ctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagttgttg 8276065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 45499596 - 45499520
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||||  ||| ||||||||||| |||||||||    
T  45499596 tctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaacat-gttgttgtt 45499520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 20588690 - 20588622
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattct--gaaaaagggtttaacatg 77  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||||   |||||||||||||||||    
T  20588690 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatg 20588622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 20593228 - 20593160
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattct--gaaaaagggtttaacatg 77  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||||   |||||||||||||||||    
T  20593228 taaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatg 20593160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24007215 - 24007287
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||| || ||||||||||||||||||||| ||||||| ||||| | |||||||||||||||||| ||||||||    
T  24007215 tcatctatactaaggtaagggtgggactagctttctctgataat-gattgtataattctgaaaaaaggtttaac 24007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 8276117 - 8276197
Alignment:
Q  146 aagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||| |||||||||||| || ||||||||||||||| || |||| ||| |||||||||||  ||||| |||||||||    
T  8276117 aagagtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaat 8276197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 46197860 - 46197952
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| |||||||||||||||  ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  46197860 aattgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 46197952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 21188149 - 21188240
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||  ||| |||  |||| |||||||||    
T  21188149 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaat 21188240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 14792666 - 14792728
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| |||||||||||| || | | ||||||||||    
T  14792666 tttgaaactaaaattgatcgtagaaagagtagataatctgatgaattaggttgataattggtg 14792728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 16058312 - 16058366
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    ||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  16058312 tctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaa 16058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 44892398 - 44892336
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  44892398 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 44892336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51336541 - 51336467
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaaca 75  Q
    |||||||| ||||||||||||||||||||  ||||||||||  |  ||||||| |||||||||| || |||||||    
T  51336541 tcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 51336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 23194669 - 23194718
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  23194669 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 23194718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 45574176 - 45574225
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  45574176 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 45574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 297245 - 297202
Alignment:
Q  183 tgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  297245 tgttcaggttgtagaataaacataggttgagtttcctatcaaat 297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12327733 - 12327807
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaaca 75  Q
    |||||||| |||||||||||||| |||||  ||||||||||  |  ||||||| |||||||||| || |||||||    
T  12327733 tcatcaatactaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 12327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 44822246 - 44822312
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||||||||| ||||||||||  ||||| |||  ||  ||||| |||||||||||||||||||    
T  44822246 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 44822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 13880693 - 13880742
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  13880693 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 13880742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 22130182 - 22130231
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||| ||||||||||||||||||||||  ||||| |||||||||    
T  22130182 aattgatgttaaggttgtagaataatcataggttaagtttcctatcaaat 22130231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 28313244 - 28313195
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||| ||||||||||||||  ||||| |||||||||    
T  28313244 aattgatgttcaggttgtggaataatcataggttaagtttcctatcaaat 28313195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 50001413 - 50001321
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| |||| || |||||| |||||||||    
T  50001413 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatatgttgagtttcctatcaaat 50001321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 19676763 - 19676711
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 21046049 - 21046101
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29763622 - 29763662
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  29763622 tcatcaatactaaggtaagggtgggactaactttctctaat 29763662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 41225557 - 41225601
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    ||||||||||||||||| ||| |||||||||| ||||| ||||||    
T  41225557 tttgaaactaaaattgaatgtagaaagagtagataatccgatgaa 41225601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 41226810 - 41226854
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    ||||||||||||||||| ||| |||||||||| ||||| ||||||    
T  41226810 tttgaaactaaaattgaatgtagaaagagtagataatccgatgaa 41226854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46197735 - 46197775
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  46197735 tcatcaatactaaggtaagggtgggactaactttctctaat 46197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 2301 - 2085
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2301 tctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaacatagttgttgttgttttgttaatttagattgttg 2202  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2201 agaaaatcagg-ttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 2103  T
Q  209 tagagttttctatcaaat 226  Q
    |||| |||||||||||||    
T  2102 tagatttttctatcaaat 2085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 29045333 - 29045109
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaattta 100  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  29045333 tcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaaaagggtttaacatggttattgttgttttgttaattta 29045234  T
Q  101 gattgttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaata 200  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  29045233 gattgttaagaaaattagg-ttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaata 29045135  T
Q  201 atcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||||    
T  29045134 atcataggtagagttttctatcaaat 29045109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 25921950 - 25921851
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||||||||||||| |||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  25921950 tttgaaactaaaattgattgtagaaagagtaaataatctgatgaattaaggtaatgattggtgttcaggttgtagaataatcataggaaaagttttctat 25921851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 21683074 - 21683152
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgt 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttgt 21683152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 10446271 - 10446195
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  10446271 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 10446195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 23658143 - 23658078
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  23658143 tctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaac 23658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 19825484 - 19825564
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||| | || |||||||||    
T  19825484 tctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgtt 19825564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 20410512 - 20410575
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaac 20410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 18982626 - 18982548
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    |||||||||| ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  18982626 tctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 18982548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 25601445 - 25601533
Alignment:
Q  138 attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||| |||||||||||||||  | ||| |||||||||||||| |||||| |||||| |||||||||||| ||| |||||||| ||||    
T  25601445 attgttaaaagagtaggtaatccaaagaattaaggtaataattgatgttcatgttgtataataatcataggaagaattttctataaaat 25601533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 16447896 - 16447961
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  16447896 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 16447961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 21119948 - 21120013
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  21119948 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 21120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 19102604 - 19102669
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||| | |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  19102604 gaaagagtggataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 19102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 27557562 - 27557509
Alignment:
Q  173 taataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||  |||||||||||||||||| ||||||| ||||||||||||||||    
T  27557562 taataattgaagttcaggttgtagaataaacataggttgagttttctatcaaat 27557509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 15998942 - 15998863
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| |||||  ||||||||||  |  |||||||||||||||||||| ||||||| | || |||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaaccttgtagttgttgtt 15998863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 35057480 - 35057389
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  |||||  | ||| | ||||| | ||||||||||||||||||| || ||  |||||||||||||||    
T  35057480 ttgattgttgaaagtgtaggtaatccaatgaatcatggtgaaaattgttattcaggttgtagaataatcttaagttaagttttctatcaaat 35057389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 13285802 - 13285724
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    |||||||||||||||||||||   |||| |||| ||| |||  ||||||||||||| ||||||| ||| ||||||||||    
T  13285802 tctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggtttaccattgttgttgttg 13285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 18982348 - 18982282
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||||||||| ||||||||||  |||||||||  ||| ||| | |||||||||||||||||||    
T  18982348 ttgattgttgaaagcgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataa 18982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 23431550 - 23431612
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  23431550 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 23431612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 13765242 - 13765193
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  13765242 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 13765193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 20556189 - 20556238
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| |||||    
T  20556189 aattgatgttcaggttgtagaataatcataggttaagttttctaacaaat 20556238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 23226014 - 23226063
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  23226014 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 23226063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 23956758 - 23956709
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  23956758 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 23956709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 31021878 - 31021927
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  31021878 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 31021927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 15890710 - 15890778
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||  | ||||||||||    
T  15890710 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatg 15890778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 19825614 - 19825694
Alignment:
Q  146 aagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||| | || ||||||| || ||||||||||||||| || |||| ||| |||||||||||  ||||| |||||||||    
T  19825614 aagagtagatgatatgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaat 19825694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 23658037 - 23657993
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||    
T  23658037 tttgaaactaaaattgattgtagaaagagtagataatccgatgaa 23657993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27329971 - 27330047
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||| |||||||||| ||| |||||  ||||||||||  | ||||||||||||||||||  | ||||||||||    
T  27329971 tcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatg 27330047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27390711 - 27390787
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||| |||||||||| ||| |||||  ||||||||||  | ||||||||||||||||||  | ||||||||||    
T  27390711 tcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatg 27390787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 34140559 - 34140598
Alignment:
Q  51 tataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  34140559 tataattctggaatagggtttaacatggttgttgttgttt 34140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 34153175 - 34153214
Alignment:
Q  51 tataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  34153175 tataattctggaatagggtttaacatggttgttgttgttt 34153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 7217346 - 7217408
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| | || | ||||||||||    
T  7217346 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattcagttgataattggtg 7217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 22557197 - 22557135
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  22557197 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 22557135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 32259794 - 32259732
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  32259794 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 32259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 34140454 - 34140506
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  34140454 tctaaggtaagggtgggactag-cttctctaataatgggtt-tataattttgaaa 34140506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 34153070 - 34153122
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  34153070 tctaaggtaagggtgggactag-cttctctaataatgggtt-tataattttgaaa 34153122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 15891684 - 15891776
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||| ||||| ||||||| |||||| |||||||||    
T  15891684 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaat 15891776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 15900769 - 15900861
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||| ||||| ||||||| |||||| |||||||||    
T  15900769 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaat 15900861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 25619054 - 25619103
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  25619054 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 25619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 7828024 - 7827972
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 14978698 - 14978730
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  14978698 aattgatgttcaggttgtagaataatcataggt 14978730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 23150287 - 23150339
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 31734656 - 31734612
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    |||||||||||||||||| || |||||||||| ||||| ||||||    
T  31734656 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaa 31734612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 19283108 - 19282891
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaaggg--tttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaagggggtttaacatggttgttgttgttttgttaatttagattgttg 19283009  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19283008 agaaaattaggtttttgaaattaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcatagg 19282909  T
Q  209 tagagttttctatcaaat 226  Q
    ||||||||||||||||||    
T  19282908 tagagttttctatcaaat 19282891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 13315080 - 13315288
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||       ||||||||||||||| ||||||||    
T  13315080 tctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaacatg-------ttgttttgttaattttgattgttg 13315172  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||| |  ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  13315173 agaaa-ttaggtttt-gaaattaaaattgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcatagg 13315270  T
Q  209 tagagttttctatcaaat 226  Q
    ||||||||||||||||||    
T  13315271 tagagttttctatcaaat 13315288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 38295603 - 38295452
Alignment:
Q  69 tttaacatggttgttgttgttttgttaatttagattgttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaact 168  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| | ||||||||||||||| |||||||||||||| |||||| |    
T  38295603 tttaacatggttgttgttgttttgttaatttacattgttgagaaa-ttaagtttttgacattaaaattgattgttgcaagagtaggtaatccgatgaagt 38295505  T
Q  169 aaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38295504 aaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctat 38295452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 16250220 - 16250366
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  16250220 tctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaacatcgttggtgttgttttgttaattttgattgttg 16250319  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaa 157  Q
    | ||||||| | |||||||||||||||||||||||||||||||||||||    
T  16250320 a-aaaattaag-ttttgaaactaaaattgattgttgaaagagtaggtaa 16250366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 12754781 - 12754872
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  12754781 ttgattgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaat 12754872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 47975007 - 47975098
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  47975007 ttgattgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaat 47975098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 38299802 - 38299738
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaa 73  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38299802 tctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 708637 - 708728
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||| ||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  708637 ttgattgttgaaagagtaggcaatatgatggattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaat 708728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 708427 - 708492
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  708427 tctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15575647 - 15575712
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15575647 tctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 15575712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 20252180 - 20252257
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  20252180 tctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgtt 20252257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 47095506 - 47095426
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| | || |||||||||    
T  47095506 tctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgtt 47095426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 43745709 - 43745630
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| | || |||||||||    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttgtt 43745630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 8930763 - 8930845
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||    ||||||||||||||    
T  8930763 tctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaacatg----ttgttgttttgtta 8930845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 58411 - 58479
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    
T  58411 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 58479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 8488093 - 8488157
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 8513752 - 8513816
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 19195665 - 19195586
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| | || |||||||||    
T  19195665 tctaaggtaagggtgggactagctttctctaataatgagttgtataattctg-aaaagggtttaaccttgtagttgttgtt 19195586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 33556103 - 33556185
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    ||||||||||||||    
T  33556103 tctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg----ttgttgttttgtta 33556185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 13744508 - 13744576
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| ||||| |||| ||||||||||||    
T  13744508 tctaaggtaagggtgggactagctttctctaataatgggttttatgattctaaaaaggggtttaacatg 13744576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 18874663 - 18874719
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa 65  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18874663 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaa 18874719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 25943319 - 25943254
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacat 76  Q
    |||||||||||||||||||| ||||||||||||||||||||||  || |||||| |||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaacat 25943254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 43276744 - 43276797
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaa 64  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaa 43276797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 36300639 - 36300707
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    
T  36300639 tctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg 36300707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 3287798 - 3287743
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaa 64  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  3287798 tctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 15720831 - 15720757
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||| ||||||||||| ||||||| |||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  15720831 taaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 15720757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 48274411 - 48274349
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcata 206  Q
    |||||||||| |||||||||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  48274411 gaaagagtagataatctgatgaattaaagtaataagtggtgttcatgttgtagaataatcata 48274349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 14274159 - 14274068
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  ||||| |||  ||  ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  14274159 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 14274068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 18570701 - 18570634
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacat 76  Q
    ||||||||||||||| |||||| |||||||||||||||||||||  |||||  ||| |||||||||||    
T  18570701 tctaaggtaagggtgagactagctttctctaataatgggttgtaagattctagaaaggggtttaacat 18570634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 831861 - 831926
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  |||||||||| |||||| |||||||||||||||| || |||||||    
T  831861 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 1197041 - 1197106
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  |||||||||| |||||| |||||||||||||||| || |||||||    
T  1197041 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 1197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 10063025 - 10063090
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||| ||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  10063025 gaaagagtagataatttgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 10063090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 16550117 - 16550209
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| ||||||||||||||||    
T  16550117 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaat 16550209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 16615545 - 16615453
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| ||||||||||||||||    
T  16615545 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagttttctatcaaat 16615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 32160315 - 32160407
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| |||||||||||||||  ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  32160315 aattgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 32160407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 34958386 - 34958321
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  ||| ||||||||||||||||||||| |||||||| || |||||||    
T  34958386 tgggactagctttctctaaagatgagttgtataattctgaaaaaggatttaacattgtagttgttg 34958321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 4690662 - 4690726
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||| ||||||||||  ||||||||||  |  ||||||||||||||||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4690726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 15700733 - 15700801
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||| ||  ||||| ||||||||||||||||||||||  |||| |||| ||||||||||||    
T  15700733 tctaaggtaaggatgatactagctttctctaataatgggttgtatggttctaaaaaggggtttaacatg 15700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 17070421 - 17070497
Alignment:
Q  150 gtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||| |||||||||||| || ||||||||||||||| || |||| ||| |||||||||||  ||||| |||||||||    
T  17070421 gtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaat 17070497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 37539384 - 37539293
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  |||||  | ||| | ||||| | ||||||||||||||||||| |||||  ||||| |||||||||    
T  37539384 ttgattgttgaaagtgtaggtaatccaatgaatcatggtgaaaattgttattcaggttgtagaataatcttaggttaagtttcctatcaaat 37539293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 15700887 - 15700953
Alignment:
Q  15 gtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttg 81  Q
    ||||||| | |||||| |||||||||||||| ||||||| ||||| |||| ||||||||||| ||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaacattgttg 15700953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 48212726 - 48212807
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa--gggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| |||||| |||||| |||||| |||||||| ||||| |||||  ||||||||||| ||  ||||||||    
T  48212726 ctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattgttgtt 48212807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 4325991 - 4325942
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  4325991 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 4325942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 14105584 - 14105633
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  14105584 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 14105633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 14415601 - 14415650
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  14415601 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 14415650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 44190373 - 44190422
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  44190373 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 44190422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 12127161 - 12127229
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||  | ||||||||||    
T  12127161 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatg 12127229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 42565948 - 42566039
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||| ||||||  ||||| |||  ||  ||||| |||||||||||||||||||  |||||||  |||| |||||||||    
T  42565948 ttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaat 42566039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 9743182 - 9743244
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  9743182 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 9743244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 15119410 - 15119472
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  15119410 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 15119472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 20214201 - 20214147
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  |||||| |||  || |||||||||||||||||    
T  20214201 tctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaa 20214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 20586406 - 20586352
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  20586406 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 20586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 43276847 - 43276909
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||  ||||| |||||| || | | ||||||||||    
T  43276847 tttgaaactaaaattgattgtagaaagagtaaataatccgatgaattaggttgataattggtg 43276909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 14188450 - 14188499
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||| ||||||||||||||||||||  ||||| |||||||||    
T  14188450 aattgatgttcaagttgtagaataatcataggttaagtttcctatcaaat 14188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 16462964 - 16462915
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||||||||||||||||||| |  ||||| |||||||||    
T  16462964 aattgatgttcaggttgtagaataatcatagattaagtttcctatcaaat 16462915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 17505121 - 17505170
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  17505121 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 17505170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 17548093 - 17548044
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  17548093 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 17548044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 25942366 - 25942317
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||||||||||||||| |||||  ||||| |||||||||    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaat 25942317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 8851159 - 8851211
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 12372326 - 12372274
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 12465260 - 12465312
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 14160959 - 14160995
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaat 158  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  14160959 tttgaaactaaaattgattgtagaaagagtagataat 14160995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 14318021 - 14317977
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    |||||||||||||||||| || |||||||||| ||||| ||||||    
T  14318021 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaa 14317977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29052172 - 29052212
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  29052172 tcatcaatactaaggtaagggtgggactaactttctctaat 29052212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 12917304 - 12917515
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12917304 tctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 12917403  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    || ||||||||||||||||| ||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  12917404 ag-aaattaggtttttgaaattaaaattgattgttggaaaagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtaaaataatcatagg 12917502  T
Q  209 tagagttttctat 221  Q
    |||||||| ||||    
T  12917503 tagagtttcctat 12917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 45803329 - 45803539
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  45803329 tctaaagttagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttgttttgttaattttgattgttg 45803428  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||  ||| ||||| ||| ||||||||||||||| ||||||    
T  45803429 ag-aaattagg-ttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacatagg 45803526  T
Q  209 tagagttttctat 221  Q
    | |||||| ||||    
T  45803527 ttgagtttcctat 45803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 6805043 - 6805134
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  6805043 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaat 6805134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 22841277 - 22841363
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22841277 tctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatgattgttgttgttttgtta 22841363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 29907693 - 29907481
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| | || |||||||||  |||  |   |||  | |    
T  29907693 tctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtt--tgatgat--tag 29907598  T
Q  109 agaaaattaggtttttgaaactaaaattg-attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatag 207  Q
    || ||||||||  || |||| |||||||| ||||||||||| ||||||||| ||||||| || |||| | ||||||||||  |||| ||||||| |||||    
T  29907597 ag-aaattagg-gttagaaattaaaattgaattgttgaaagtgtaggtaatatgatgaattagggtatttattggtgttcgagttgcagaataaacatag 29907500  T
Q  208 gtagagttttctatcaaat 226  Q
    ||||| ||| |||||||||    
T  29907499 gtagaatttcctatcaaat 29907481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 29948859 - 29948647
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| | || |||||||||  |||  |   |||  | |    
T  29948859 tctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtt--tgatgat--tag 29948764  T
Q  109 agaaaattaggtttttgaaactaaaattg-attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatag 207  Q
    || ||||||||  || |||| |||||||| ||||||||||| ||||||||| ||||||| || |||| | ||||||||||  |||| ||||||| |||||    
T  29948763 ag-aaattagg-gttagaaattaaaattgaattgttgaaagtgtaggtaatatgatgaattagggtatttattggtgttcgagttgcagaataaacatag 29948666  T
Q  208 gtagagttttctatcaaat 226  Q
    ||||| ||| |||||||||    
T  29948665 gtagaatttcctatcaaat 29948647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 29998013 - 29997801
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| | || |||||||||  |||  |   |||  | |    
T  29998013 tctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtt--tgatgat--tag 29997918  T
Q  109 agaaaattaggtttttgaaactaaaattg-attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatag 207  Q
    || ||||||||  || |||| |||||||| ||||||||||| ||||||||| ||||||| || |||| | ||||||||||  |||| ||||||| |||||    
T  29997917 ag-aaattagg-gttagaaattaaaattgaattgttgaaagtgtaggtaatatgatgaattagggtatttattggtgttcgagttgcagaataaacatag 29997820  T
Q  208 gtagagttttctatcaaat 226  Q
    ||||| ||| |||||||||    
T  29997819 gtagaatttcctatcaaat 29997801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 14641546 - 14641626
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  14641546 tctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgtt 14641626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 17208578 - 17208498
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| | || |||||||||    
T  17208578 tctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgtt 17208498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 14152398 - 14152462
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaac 14152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 14520500 - 14520420
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||| | || |||||||||    
T  14520500 tctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgtt 14520420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 54875474 - 54875554
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    ||||||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg----ttgttgttttgtta 54875554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 6156764 - 6156689
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  6156764 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaggggtttaacat-gttgttgtt 6156689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 25202188 - 25202109
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||||||||||||| || | ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  25202188 tctaaggtaagggtgggactagctt-cgctaataatgggtt-tataaatctgaaatagggtttaacatggttgttgttgttt 25202109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 3527155 - 3527223
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| | |||| ||||||||||||    
T  3527155 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaacatg 3527223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 5215699 - 5215636
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  5215699 taaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaac 5215636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 2247877 - 2247942
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||| || |||||||    
T  2247877 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 2247942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 2841504 - 2841586
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||  |||||||||||    ||||||||||||||    
T  2841504 tctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaacatg----ttgttgttttgtta 2841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 6159459 - 6159383
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    ||||||||||||||| |||| | |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  6159459 tctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 6159383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 14442229 - 14442153
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||  |||||||||| |||||||||    
T  14442229 tctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaacat-gttgttgtt 14442153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 17684835 - 17684900
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacat 76  Q
    |||||||||||||||||||| ||||| |||||||||||||||| ||||| |||| |||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaacat 17684900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 17669698 - 17669778
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    |||||||| | ||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    ||||||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg----ttgttgttttgtta 17669778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 14641676 - 14641756
Alignment:
Q  146 aagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||| |||||||||||| || ||||||||||||||| || |||| ||| |||||||||||  ||||| |||||||||    
T  14641676 aagagtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaat 14641756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 10551232 - 10551167
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||| | ||| ||||||  ||||||||| ||||||||||||||||||||    
T  10551232 gaaagagtagataatctgatggattaaagtaataggtggtgttcatgttgtagaataatcataggt 10551167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 15566798 - 15566733
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||| |||||||||||||||  ||||||||||  |  ||||||||||||||||||||||||||||    
T  15566798 tctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 15566733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 22652710 - 22652618
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  22652710 aattgattgtt-aaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 22652618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 36167459 - 36167394
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||| ||||||||||    
T  36167459 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaagaatcataggt 36167394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 48043476 - 48043555
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||||||  ||||| || |||||||||||| || ||||||| ||||| ||||||||||||| ||||||||||||    
T  48043476 tctaaggtaagggtgtaactagctt-ctctaataatggatt-tataattttgaaatagggtttaacatgattgttgttgttt 48043555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 48631270 - 48631177
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||| |||||||||   ||||| |||  ||| ||||| |||||||||||||||||||  |||||||  |||| |||||||||    
T  48631270 aattgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaat 48631177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 24547253 - 24547178
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    ||||||||||| || |||||  |||||||||||||||||||||| ||||| |||| | ||||||||| |||||||||    
T  24547253 ctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaacat-gttgttgtt 24547178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 42423 - 42374
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  42423 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 42374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 16979849 - 16979757
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  16979849 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 16979757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 43549812 - 43549861
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  43549812 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 43549861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 46722743 - 46722792
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  46722743 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 46722792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 55291758 - 55291807
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  55291758 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 55291807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 24177728 - 24177788
Alignment:
Q  3 atcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||| |||||||||||||||||| |  |||||||||| ||  |||||||||||||||||    
T  24177728 atcaatactaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaa 24177788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 13437128 - 13437085
Alignment:
Q  183 tgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  13437128 tgttcaggttgtagaataaacataggttgagtttcctatcaaat 13437085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 13522445 - 13522555
Alignment:
Q  115 ttaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagt 214  Q
    ||||| |||||||  | |||||||| ||| |||||||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||  ||||||   ||    
T  13522445 ttagggttttgaatttcaaattgatcgtt-aaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgt 13522543  T
Q  215 tttctatcaaat 226  Q
    || |||||||||    
T  13522544 ttcctatcaaat 13522555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 24548953 - 24549016
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaa 73  Q
    |||| ||||||||| |||||  ||| |||||||||||||||||| ||||| |||| ||||||||    
T  24548953 ctaaagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaa 24549016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 3160742 - 3160808
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    ||||||||||||||||||||||||   ||||| |||  ||| ||||| |||| ||||||||||||||    
T  3160742 ttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataa 3160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 13520405 - 13520367
Alignment:
Q  51 tataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||| || |||||||||||||||||||||||||    
T  13520405 tataattctggaatagggtttaacatggttgttgttgtt 13520367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 14152503 - 14152565
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||||||  ||||||||| ||||| |||||| || | | ||||||||||    
T  14152503 tttgaaactaaaattgattgtataaagagtagataatccgatgaattaggttgataattggtg 14152565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 40808050 - 40807996
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  40808050 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40807996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 44274472 - 44274418
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  44274472 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 49900784 - 49900730
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  49900784 tctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 49900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 50755266 - 50755320
Alignment:
Q  23 gggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||  ||||||||||||||| |||||| ||||| |||| ||||||||||||    
T  50755266 gggactaactttctctaataatggattgtatgattctaaaaaggggtttaacatg 50755320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 53646162 - 53646224
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  53646162 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 53646224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 54330410 - 54330472
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  54330410 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 54330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 6820065 - 6820016
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  6820065 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 6820016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 10555202 - 10555153
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  10555202 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 10555153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 16050980 - 16050915
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaaca 75  Q
    ||||||||||||||||||||  ||||||||||  |  ||||||| |||||||||  ||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaaca 16050915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 18890319 - 18890270
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||| ||||||||||||||  ||||| |||||||||    
T  18890319 aattgatgttcaggttgtggaataatcataggttaagtttcctatcaaat 18890270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 18893578 - 18893529
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||| ||||| ||||||||||||||  |||||||||||||||    
T  18893578 aattgatgttcacgttgtggaataatcataggttaagttttctatcaaat 18893529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 16643978 - 16643946
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  16643978 aattgatgttcaggttgtagaataatcataggt 16643946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17045018 - 17044966
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17047178 - 17047126
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17541486 - 17541434
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22306583 - 22306635
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 24152541 - 24152573
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  24152541 aattgatgttcaggttgtagaataatcataggt 24152573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 50350976 - 50351024
Alignment:
Q  178 attggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||| ||||||||||||| ||||| |||||| |||||||||||| ||||    
T  50350976 attgatgttcaggttgtataataaacataggaagagttttctataaaat 50351024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 7e-73; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 22483834 - 22483630
Alignment:
Q  15 gtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgagaaaa 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| |||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttattttgttaattttgattgttgag-aaa 22483736  T
Q  115 ttaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagt 214  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||  ||| ||||| ||||||||||||||||||| ||||||| ||||    
T  22483735 ttagg-ttttgaaactaaaatttattgttgaaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagt 22483637  T
Q  215 tttctat 221  Q
    || ||||    
T  22483636 ttcctat 22483630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 22483991 - 22483829
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||||| | |||||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||    
T  22483991 tctaaggtaagcg-gggactaactttctctaataatgagttgtataattcttaaaaagggtttaacatggttgttgttgttttattgatttagattgttg 22483893  T
Q  109 agaaaattaggttttt-gaaactaaaattgattgttgaaagagtaggtaatctgatgaactaagg 172  Q
    ||||| |||||||||| |||| ||||||||||||||| |||||||||||||| |||||| |||||    
T  22483892 agaaa-ttaggttttttgaaattaaaattgattgttgcaagagtaggtaatccgatgaagtaagg 22483829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 22345218 - 22345119
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||    |||||||||||||||||||| ||||||||    
T  22345218 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaaca----tgttgttgttttgttaattttgattgttg 22345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 22356878 - 22356779
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||    |||||||||||||||||||| ||||||||    
T  22356878 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaaca----tgttgttgttttgttaattttgattgttg 22356783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 12037267 - 12037371
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | |||||||||||||| ||||||||||||||||||||||||||  | ||||    
T  12037267 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttaataattggtgtttaggttgtagaataatcataggtagagactcctat 12037366  T
Q  222 caaat 226  Q
    |||||    
T  12037367 caaat 12037371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22208323 - 22208258
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22208323 tctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22208258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 18816295 - 18816373
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 18816373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21514743 - 21514665
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | || |||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttgtt 21514665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 51 - 226
Target Start/End: Original strand, 36732517 - 36732691
Alignment:
Q  51 tataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgagaaaattaggtttttgaaact--aaaattgattgttgaaag 148  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    |||||||| ||   ||  |  ||||||||||||||||||    
T  36732517 tataattctaaaaaagggtttaacatggttgttgttgttttgttaatttagattgttattgaaattagggtt---aatttgcaaaattgattgttgaaag 36732613  T
Q  149 agtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||| |   |||| ||| ||||  |  |  |||||| |||||||||||||||||||  ||||| |||||||||    
T  36732614 agtaggtaaaccattgaattaacgtaaggaaggaggttcagattgtagaataatcataggtcaagtttcctatcaaat 36732691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 36732411 - 36732490
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttgtt 36732490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 36306051 - 36305966
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    ||||||||||||||| |||||| |||||||||||| || |||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  36306051 tctaaggtaagggtgagactagctttctctaataacgg-ttgtatgattctgaaaaaggttttaaaatggttgttgttgttttgtta 36305966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 21399771 - 21399695
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  21399771 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 21399695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 21794264 - 21794188
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  21794264 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 21794188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12577941 - 12577869
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||| ||||||||||||||||||||  |||||||||||||  |||||||||||| |||||||||||||||    
T  12577941 tcatcaatactaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaac 12577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 18023567 - 18023632
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||| || |||||||    
T  18023567 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 18023632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 22610265 - 22610333
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||  |||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  22610265 tctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatg 22610333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 4380616 - 4380695
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||  ||||||||||  |  |||||||||||||||||||||||||||| | || |||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 4380695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 22258306 - 22258369
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaac 22258369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 18834474 - 18834409
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||| |||| ||||||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattct-aaaaggggtttaacatg 18834409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 38184923 - 38184977
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacat 76  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  38184923 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacat 38184977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 26220480 - 26220415
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  26220480 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 26220415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 26222473 - 26222537
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| |||||||||||||||||||    
T  26222473 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcatagg 26222537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 21676498 - 21676574
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||||| | || |||||||    
T  21676498 tctaaggtaagggtgggactag-cttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttg 21676574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 21676591 - 21676667
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||||| | || |||||||    
T  21676591 tctaaggtaagggtgggactag-cttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttg 21676667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 21678844 - 21678920
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||||| | || |||||||    
T  21678844 tctaaggtaagggtgggactag-cttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttg 21678920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 22474705 - 22474643
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || | | ||||||||||    
T  22474705 tttgaaactaaaattgattgtcgaaagagtagataatctgatgaattaggttgataattggtg 22474643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 25657628 - 25657721
Alignment:
Q  132 aaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||| ||||||||||||||   ||||| |||  ||| ||||| |||||||| |||||||||| ||||||| |||||| |||||||||    
T  25657628 aaattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaat 25657721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 23884223 - 23884157
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    ||||||||||||| |||||||| |||||||||  ||||||||||| ||||| |||| ||||||||||||    
T  23884223 tctaaggtaagggcgggactagctttctctaa--atgggttgtatgattctaaaaaggggtttaacatg 23884157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 20879412 - 20879334
Alignment:
Q  132 aaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggta 210  Q
    |||||||||||| |||| ||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||  |||||||    
T  20879412 aaattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggta 20879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 22610377 - 22610463
Alignment:
Q  130 taaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttt 216  Q
    ||||||||||||||||||||||||||||||   |||| ||| ||||  | ||  |||||| ||||||||||| ||||||| ||||||    
T  22610377 taaaattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagttt 22610463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 8413905 - 8413954
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  8413905 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 8413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 16198773 - 16198681
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  16198773 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 16198681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 19880760 - 19880668
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  19880760 aattgattgtt-aaagagtaggtaattaaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 19880668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 19882843 - 19882794
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  19882843 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 19882794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 21676713 - 21676773
Alignment:
Q  141 gttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||||||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||    
T  21676713 gttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 20517172 - 20517263
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  ||||| |||  ||| ||| | |||||||||||||||||||  ||||||   |||| |||||||||    
T  20517172 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaat 20517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 21579312 - 21579371
Alignment:
Q  125 gaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  21579312 gaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 21579371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 22345059 - 22344968
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  ||||| |||  ||| ||| | |||||||||||||||||||  ||||||   |||| |||||||||    
T  22345059 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaat 22344968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 22356719 - 22356628
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  ||||| |||  ||| ||| | |||||||||||||||||||  ||||||   |||| |||||||||    
T  22356719 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaat 22356628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 23479016 - 23478927
Alignment:
Q  136 tgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  23479016 tgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 23478927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 29762971 - 29763033
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||  |||||| || | | ||||||||||    
T  29762971 tttgaaactaaaattgattgtagaaagagtagataatgcgatgaattaggttgataattggtg 29763033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 20455882 - 20455833
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  20455882 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 20455833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 20460860 - 20460811
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  20460860 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 20460811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 22258402 - 22258454
Alignment:
Q  113 aattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    ||||||||||| |||||||||| ||||||| |||||||||| ||||| ||||||    
T  22258402 aattaggtttt-gaaactaaaactgattgtagaaagagtagataatccgatgaa 22258454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 23661192 - 23661143
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  23661192 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 23661143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 25483598 - 25483647
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||| ||||||||||||||||||||||  ||||| |||||||||    
T  25483598 aattgatgtttaggttgtagaataatcataggttaagtttcctatcaaat 25483647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17158953 - 17158993
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  17158953 tcatcaatactaaggtaagggtgggactaactttctctaat 17158993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 17460364 - 17460396
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  17460364 aattgatgttcaggttgtagaataatcataggt 17460396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19880884 - 19880844
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  19880884 tcatcaatactaaggtaagggtgggactaactttctctaat 19880844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 20455146 - 20455114
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  20455146 aattgatgttcaggttgtagaataatcataggt 20455114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 20463090 - 20463058
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggt 209  Q
    ||||| |||||||||||||||||||||||||||    
T  20463090 aattgatgttcaggttgtagaataatcataggt 20463058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23479144 - 23479104
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  23479144 tcatcaatactaaggtaagggtgggactaactttctctaat 23479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26454770 - 26454730
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  26454770 tcatcaatactaaggtaagggtgggactaactttctctaat 26454730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 23801550 - 23801351
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    |||||||||| ||||||| ||||||||    
T  23801550 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg----ttgttgttttattaattttgattgttg 23801455  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  23801454 agaaa-ttaggtttttaaaattaaaattgattgttgaaagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataatagg 23801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 12626464 - 12626634
Alignment:
Q  49 tgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgagaaaattaggtttttgaaactaaaattgattgttgaaag 148  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  12626464 tgtataattctgaaaaagggtttaacatcgtttgtgttgttttgttaattttgattgttgagaaa-ttaggtttt-gaaactaaaattgattgttgaaag 12626561  T
Q  149 agtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||| |||||| |||   || ||||| ||||||||||||||||||| |||| || |||||| ||||    
T  12626562 agtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaacataagttgagtttcctat 12626634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 149499 - 149713
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa---gggtttaacatggttgttgttgttttgttaatttagattg 105  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||   ||||||||||||    |||| ||||||||| ||| |||      
T  149499 tctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatg----ttgtcgttttgttagttttgatgt 149594  T
Q  106 ttgagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcat 205  Q
    |  ||||| ||||| ||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||    
T  149595 tatagaaa-ttagggttt-gaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcat 149692  T
Q  206 aggtagagttttctatcaaat 226  Q
    ||||  ||||| |||||||||    
T  149693 aggttaagtttcctatcaaat 149713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 14179831 - 14179935
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||| ||||    
T  14179831 tttgaaactaaaattgattgtagaaagagtagataatctgatgaactaggttaataattggtgttcaggttgtggaataatcataggtagtgtttcctat 14179930  T
Q  222 caaat 226  Q
    |||||    
T  14179931 caaat 14179935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 14183569 - 14183673
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||||||||||||| ||||| |||| ||||| |||||||||   |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  14183569 tttgaaactaaaattgattgtagaaagggtagataatccgatgaactagtttaataattggtgttcaggttgtggaataatcataggtagagtttcctat 14183668  T
Q  222 caaat 226  Q
    |||||    
T  14183669 caaat 14183673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 1383768 - 1383859
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||  ||||| |||||||||    
T  1383768 ttgattgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaat 1383859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21315474 - 21315539
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21315474 tctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21335264 - 21335329
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21335264 tctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21335329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34491230 - 34491322
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaa-taatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgt 93  Q
    |||||||| ||||||||||||||||||||| || |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  34491230 tcatcaatactaaggtaagggtgggactagctt-ctctaaataacgagttgtataattctgaaaaagggtttaacatggttgttgttgttttgt 34491322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 28652670 - 28652758
Alignment:
Q  138 attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||| |||||||||||||||  ||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| ||||    
T  28652670 attgttaaaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaaat 28652758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 21369347 - 21369282
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||    
T  21369347 tctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaac 21369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 23610679 - 23610615
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 23610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 36734449 - 36734528
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||||||||| || | ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  36734449 tctaaggtaagggtgggatta-acttctctaataatgggtt-tataattctaaaatagggtttaacatggttgttgttgttt 36734528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 28344986 - 28345054
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||| |||||||| |||||| |||||||||||||||| ||||| ||||| |||| ||||||||||||    
T  28344986 tctaagataagggtgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaacatg 28345054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 19647173 - 19647079
Alignment:
Q  132 aaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||  ||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||  |||||||  |||| |||||||||    
T  19647173 aaattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaat 19647079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 45535862 - 45535787
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggta 210  Q
    |||||||||||||| ||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||  |||||||    
T  45535862 ttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggta 45535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40912382 - 40912320
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||| ||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  40912382 tcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40912320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 20005969 - 20006045
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    ||||||||||||||||||||||  |||| |||| ||| ||  |||||||||||||||||||||||  | |||||||||    
T  20005969 tctaaggtaagggtgggactagccttctttaatcatgagtc-tataattctgaaaaagggtttaattttgttgttgtt 20006045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 20590439 - 20590488
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  |||||||||||||||    
T  20590439 aattgatgttcaggtggtagaataatcataggttaagttttctatcaaat 20590488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 36734610 - 36734659
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||||| |||||  ||||| |||||||||    
T  36734610 aattggtgttcaggttgtagaataatcttaggttaagtttcctatcaaat 36734659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 24516240 - 24516172
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||  | ||||||||||    
T  24516240 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatg 24516172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 24717968 - 24717924
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||    
T  24717968 tttgaaactaaaattgattgtagaaagagtagataatccgatgaa 24717924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 41301086 - 41301134
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaa 225  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||||||||    
T  41301086 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaa 41301134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 23338562 - 23338605
Alignment:
Q  183 tgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  23338562 tgttcaggttgtagaataaacataggttgagtttcctatcaaat 23338605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 357943 - 357881
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||| ||||||||||||||||||||  ||||||||||  |  ||||||| |||||||||    
T  357943 tcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 357881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 17307540 - 17307486
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  17307540 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 23968726 - 23968784
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataatt 180  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| |||| | ||||||    
T  23968726 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaagttgataatt 23968784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 24941510 - 24941456
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaa 198  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| |||||||||    
T  24941510 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaa 24941456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 21072845 - 21072894
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||| ||||||||||||||  ||||| |||||||||    
T  21072845 aattgatgttcaggttgtggaataatcataggttaagtttcctatcaaat 21072894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 22173134 - 22173183
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||   |||||||| |||||    
T  22173134 aattgatgttcaggttgtagaataatcataggttatgttttctaacaaat 22173183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 25184126 - 25184034
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||  |||||||||| ||||||| |||||| |||||||||    
T  25184126 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataaacataggttgagtttcctatcaaat 25184034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 43707204 - 43707253
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||| ||||||||||||||||||||  ||||| |||||||||    
T  43707204 aattgatgttcaagttgtagaataatcataggttaagtttcctatcaaat 43707253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 5031129 - 5031181
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5031181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21080959 - 21080999
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  21080959 tcatcaatactaaggtaagggtgggactaactttctctaat 21080999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 24780840 - 24780892
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 45535726 - 45535666
Alignment:
Q  141 gttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||| ||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||    
T  45535726 gttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 8898 - 8686
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaaggg-tttaacatggttgttgttgttttgttaatttagattgtt 107  Q
    |||||| ||||||||||||||| ||| ||||||||||| |||||| |||||||||| ||| |||||||||    |||||||||||||||||| |||| ||    
T  8898 tctaagttaagggtgggactagctttatctaataatggattgtatgattctgaaaagggggtttaacatg----ttgttgttttgttaattttgattttt 8803  T
Q  108 gagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatag 207  Q
    |||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||||    
T  8802 gagaaa-ttaggtttt-gaaattaaaattgattgttgaaagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcatag 8705  T
Q  208 gtagagttttctatcaaat 226  Q
    |||||||||||||||||||    
T  8704 gtagagttttctatcaaat 8686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 6503 - 6711
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||| || |||||||  |||||||||||||||||||||| |||||||||| ||||||||||||       ||||||||||||||| ||||||||    
T  6503 tctaaggtaaaggcgggactacctttctctaataatgggttgtatgattctgaaaaggggtttaacatg-------ttgttttgttaattttgattgttg 6595  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||||| |||||||| |||||||| |    
T  6596 agaaa-ttaggtttt-gaaattaaaattgattgttgaaagagtaggtaattagatgaattaaggtaataattcgtgttcatgttgtagagtaatcataag 6693  T
Q  209 tagagttttctatcaaat 226  Q
    ||||||||||||||||||    
T  6694 tagagttttctatcaaat 6711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 114; Significance: 6e-58; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 11668 - 11497
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgag 110  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacatcgttgttgttgttttgttaattttgattgttgag 11569  T
Q  111 aaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
     |||||||| |||||||| |||||| ||||||||||||||||||||| ||| |||| | |||||||||||||||    
T  11568 -aaattagg-ttttgaaattaaaatcgattgttgaaagagtaggtaaactgttgaattgaggtaataattggtg 11497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 5508 - 5340
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||    
T  5508 tctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttt-acatcgttgttgttgttatgttaattttgattgttg 5410  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataatt 180  Q
    || |||||||| |||||||| ||||||| |||||||||||||||||||| | |||||| |||| ||||||||    
T  5409 ag-aaattagg-ttttgaaattaaaatttattgttgaaagagtaggtaaaccgatgaattaagctaataatt 5340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 19910 - 19834
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  19910 tctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 19834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 112; Significance: 9e-57; HSPs: 4)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 35184 - 35346
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35184 tctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 35283  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaagg 172  Q
    || |||| || ||||||||| ||||||||||||||| ||||||| |||||| |||||| |||||    
T  35284 ag-aaatgagatttttgaaaataaaattgattgttgcaagagtatgtaatccgatgaagtaagg 35346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 35341 - 35495
Alignment:
Q  15 gtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgagaaaa 114  Q
    |||||||||||| ||| || ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35341 gtaagggtgggattagctt-ctctaatgatgggtt-tataattctgaaatagggtttaacatggttgttgttgttttgttaatttagattgttgag-aaa 35437  T
Q  115 ttaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaagg 172  Q
    | || ||||||||| ||||||||||||||| ||||||| |||||| |||||| |||||    
T  35438 tgagatttttgaaaataaaattgattgttgcaagagtatgtaatccgatgaagtaagg 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35490 - 35563
Alignment:
Q  15 gtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||| ||| || ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  35490 gtaagggtgggattagctt-ctctaatgatgggtt-tataattctgaaatagggtttaacatggttgttgttgttt 35563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 35644 - 35693
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| | |||||||||||||||||||||||||  ||||| |||||||||    
T  35644 aattgttattcaggttgtagaataatcataggtttagtttcctatcaaat 35693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 31622023 - 31621859
Alignment:
Q  16 taagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgagaaaat 115  Q
    ||||||||| ||||  ||||||||||||| |||||||| ||||| |||| ||||||||||    |||||||||||||||||||| |||||||||| ||||    
T  31622023 taagggtggaactatctttctctaataattggttgtatgattctaaaaatgggtttaaca----tgttgttgttttgttaattttgattgttgag-aaat 31621929  T
Q  116 taggtttttgaaactaaaattgattgttg-aaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||||    
T  31621928 taggtttttgaaattaaaattgattgttgaaaagagtaggtaaaccgatgaattaaggtaataattggtg 31621859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 36508859 - 36508950
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  36508859 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaat 36508950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 18744928 - 18744863
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  18744928 tctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaac 18744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 16063805 - 16063725
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  16063805 tctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgtt 16063725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 23199207 - 23199270
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaac 23199270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 20313329 - 20313250
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||||||||||||| || |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  20313329 tctaaggtaagggtgggactagctt-ctctaatagtgggtt-tataattctgaaatagggtttaacatggttgttgttgttt 20313250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 32607314 - 32607396
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||    ||||||||||||||    
T  32607314 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatg----ttgttgttttgtta 32607396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 660841 - 660764
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| |||||||| | || |||||||||    
T  660841 ctaaggtaaggg-gggactagctttctctaataaggggttgtataattctgaaaaa-ggtttaaccttgtagttgttgtt 660764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 18318326 - 18318391
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  18318326 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 18318391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 20765371 - 20765436
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||| ||||||||| | ||||||||||||||||||    
T  20765371 gaaagagtagataatctgatgaattaaagtaataagtggtgttcatgatgtagaataatcataggt 20765436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 21398642 - 21398711
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaa-agggtttaacatg 77  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||  ||||||||||||    
T  21398642 tctaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaagggggtttaacatg 21398711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 21504078 - 21503989
Alignment:
Q  132 aaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||| |||||||||||||||||| |||  ||||| |||  ||| || || ||||||||||||||||||||||||||| |||||| ||||    
T  21504078 aaattcattgttgaaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctat 21503989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 6551288 - 6551368
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||  ||||||||||  |  |||||||||||||||||||||||||||| | || |||||||||    
T  6551288 tctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 6551368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 16063624 - 16063528
Alignment:
Q  130 taaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| |||| |||||  ||||||||||||| | |||||||| ||| |||| |||||||||||||| | ||||||  |||| |||||||||    
T  16063624 taaaattgatttttgagagagtgagtaatctgatgaagtgaggtaatatttgatgtttaggttgtagaataaacctaggtaatgtttcctatcaaat 16063528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 1627071 - 1627121
Alignment:
Q  15 gtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa 65  Q
    |||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaa 1627121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 21398924 - 21399005
Alignment:
Q  145 aaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||| || || ||  |||  ||||| ||||||||||||||||||| |||||| |||||||||||| ||||    
T  21398924 aaagagtaggtaatctaattaattagtgtacaaattgatgttcaggttgtagaataaacataggaagagttttctataaaat 21399005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 10774813 - 10774856
Alignment:
Q  46 ggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
T  10774813 ggttgtataattctaaaacagggtttaacatggttgttgttgtt 10774856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 8833309 - 8833371
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| |||||||||||| || | | ||||||||||    
T  8833309 tttgaaactaaaattgatcgtagaaagagtagataatctgatgaattaggttgataattggtg 8833371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 17011665 - 17011573
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  17011665 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 17011573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 27868731 - 27868780
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  27868731 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 27868780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 29448777 - 29448685
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||| |  ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  29448777 aattgattgtt-aaagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 29448685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 33472720 - 33472769
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  33472720 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 33472769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 8503991 - 8504053
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  8503991 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 8504053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 17875993 - 17875927
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||||||||| ||||||||||  ||||| |||  ||  ||||| |||||||||||||||||||    
T  17875993 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 17875927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 21300042 - 21300096
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  21300042 tctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 31622171 - 31622117
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||| ||  ||||||||||  | ||||||||||||||||||    
T  31622171 tctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 31622117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 18419347 - 18419298
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||||||||||||||||||| |  ||||| |||||||||    
T  18419347 aattgatgttcaggttgtagaataatcatagattaagtttcctatcaaat 18419298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24594220 - 24594269
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  24594220 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 24594269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24668314 - 24668363
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  24668314 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 24668363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24738083 - 24738132
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  24738083 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 24738132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 24750852 - 24750901
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  24750852 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 24750901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17011790 - 17011750
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  17011790 tcatcaatactaaggtaagggtgggactaactttctctaat 17011750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 16296820 - 16296716
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||    
T  16296820 tttgaaattaaaattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctat 16296721  T
Q  222 caaat 226  Q
    |||||    
T  16296720 caaat 16296716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 226
Target Start/End: Complemental strand, 35660903 - 35660733
Alignment:
Q  51 tataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttgaga-aaattaggtttttgaaactaaaattgattgttgaaaga 149  Q
    |||||||||| || ||||||||||||||||||||||||||     |||| |||  || ||| |||||||| ||| |||  |||||||||||||||| |||    
T  35660903 tataattctggaatagggtttaacatggttgttgttgtttg----attttgatgatt-agagaaattagggttt-gaatttaaaattgattgttgagaga 35660810  T
Q  150 gtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||    
T  35660809 gtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaat 35660733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 14549586 - 14549495
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||    
T  14549586 ttgattgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaat 14549495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 19434775 - 19434866
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  19434775 ttgattgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaat 19434866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 16296992 - 16296912
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||    
T  16296992 tctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgtt 16296912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 14631189 - 14631109
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  14631189 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 14631109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 25513905 - 25513825
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  25513905 tctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgtt 25513825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 9639064 - 9638854
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| | || ||||     ||| |||||| || ||||     
T  9639064 tctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttg-----ttgataattttga-tgttt 9638971  T
Q  109 agaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 208  Q
     |  ||||||| ||| |||  |  ||||| ||| |  |||||||| |||||||||||| || ||||||||||||||| || |||| ||| ||||||||||    
T  9638970 tgggaattagg-tttagaagttgtaattggttgatttaagagtagataatctgatgaattagggtaataattggtgtccaagttgcagattaatcatagg 9638872  T
Q  209 tagagttttctatcaaat 226  Q
    |  ||||| |||||||||    
T  9638871 ttaagtttcctatcaaat 9638854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 10273437 - 10273331
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||| |||||       ||||||||||||||||| ||||||||    
T  10273437 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataaca-------tgttgttttgttaattttgattgttg 10273345  T
Q  109 agaaaattaggtttt 123  Q
    || ||||||||||||    
T  10273344 ag-aaattaggtttt 10273331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 9622543 - 9622342
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||| |||| ||||||||||    |||||||||||||||| ||| || ||||     
T  9622543 tctaaggtaagggtgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaaca----tgttgttgttttgttagttttga-tgtta 9622449  T
Q  109 agaaaattaggtttttgaaact--aaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcata 206  Q
       |||||||| ||   ||| |  |||||||||||||||||||||||||||||   |||| ||| ||||  | ||  |||||| ||||||||||| ||||    
T  9622448 tagaaattagggtt---aaattgcaaaattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacata 9622352  T
Q  207 ggtagagttt 216  Q
    ||| ||||||    
T  9622351 ggttgagttt 9622342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 33186955 - 33186892
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33186955 taaggtaggggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 33186892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 12424290 - 12424344
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa 65  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaa 12424344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 55583250 - 55583174
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| | |||| ||||||||||| |||||||||    
T  55583250 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattataaaaaggggtttaacat-gttgttgtt 55583174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 35661002 - 35660930
Alignment:
Q  17 aagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| | || |||||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgtt 35660930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 26446260 - 26446197
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaa 73  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  26446260 ctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaa 26446197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 13847254 - 13847193
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggttt 71  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||    
T  13847254 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15239814 - 15239879
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||||| ||||||||||||||||||    
T  15239814 tctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaac 15239879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14281178 - 14281113
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  14281178 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatgttgtagaataatcataggt 14281113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 10694360 - 10694452
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| |||||||||||||||  ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  10694360 aattgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 10694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 51463185 - 51463234
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  51463185 aattgatgttcaggttgtagaataatcataggtaaagttttctaacaaat 51463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 54798028 - 54798093
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  |||||||||  |||||||||||||||||||    
T  54798028 gaaagagtagataatctgatgaattaaagtaataggtggtgttcatattgtagaataatcataggt 54798093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 15747794 - 15747849
Alignment:
Q  32 tttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    |||||||||  ||| |||||||||||||||||||||||||||||| || |||||||    
T  15747794 tttctctaaagatgagttgtataattctgaaaaagggtttaacattgtagttgttg 15747849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 33186851 - 33186789
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  33186851 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 33186789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 33243397 - 33243459
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  33243397 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 33243459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 44023706 - 44023768
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| |||||||||||| || | | ||||||||||    
T  44023706 tttgaaactaaaattgatcgtagaaagagtagataatctgatgaattaggttgataattggtg 44023768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 12611806 - 12611757
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| |||||    
T  12611806 aattgatgttcaggttgtagaataatcataggttaagttttctaacaaat 12611757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 17143063 - 17142998
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||| ||| |||||||||  ||| |||||||||||||||||| ||||||||||| || |||||||    
T  17143063 tgggaatagctttctctaaagatgagttgtataattctgaaaaggggtttaacattgtagttgttg 17142998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 28386139 - 28386090
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  28386139 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 28386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 2424386 - 2424449
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaa 73  Q
    |||||||||||||| |||||  ||||||||||  |  ||||||||||| |||||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaa 2424449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 15115276 - 15115222
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  15115276 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15115222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 19566021 - 19566083
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  19566021 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 19566083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 40230255 - 40230193
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  40230255 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 40230193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 46741148 - 46741086
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||| | ||||| |||||| || | | ||||||||||    
T  46741148 tttgaaactaaaattgattgtagaaagagtggataatccgatgaattaggttgataattggtg 46741086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15344830 - 15344781
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  15344830 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 15344781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 15447534 - 15447583
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  15447534 aattgatgttcaggttgtagaataatcataggttaagtttgctaacaaat 15447583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 16277444 - 16277493
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  16277444 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 16277493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 23802561 - 23802610
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  23802561 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 23802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 53387054 - 53387103
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| ||||||||| |||||||||||||||||  ||||| |||||||||    
T  53387054 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaat 53387103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 11425995 - 11425943
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 11425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 12623265 - 12623229
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaat 158  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  12623265 tttgaaactaaaattgattgtagaaagagtagataat 12623229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15009025 - 15008985
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  15009025 tcatcaatactaaggtaagggtgggactaactttctctaat 15008985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25091705 - 25091653
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 37019724 - 37019656
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    ||||||||||||||| |||||  ||||||||||  |  |||||||||||||||||  | ||||||||||    
T  37019724 tctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatg 37019656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 53630474 - 53630526
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 68724 - 68876
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttaga-ttgtt 107  Q
    |||||||||||||||||||||  |||||||||||||||||| ||| ||||| |||| ||||||||||    |||||||||||||||||||| || |||||    
T  68724 tctaaggtaagggtgggactacctttctctaataatgggttatatgattctaaaaacgggtttaaca----tgttgttgttttgttaattttgatttgtt 68819  T
Q  108 gagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    ||| |||||||| |||||||| ||||||||||||| |||||||||||||| | ||||||    
T  68820 gag-aaattagg-ttttgaaattaaaattgattgtcgaaagagtaggtaaaccgatgaa 68876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 56925 - 56863
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||  |||||| || | | ||||||||||    
T  56925 tttgaaactaaaattgattgtagaaagagtagataattcgatgaattaggttgataattggtg 56863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 2763 - 2659
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||  ||||| ||||    
T  2763 tttgaaattaaaattgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaagtttcctat 2664  T
Q  222 caaat 226  Q
    |||||    
T  2663 caaat 2659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 2935 - 2855
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  2935 tctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 2855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 21473 - 21385
Alignment:
Q  138 attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  21473 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaat 21385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 21665 - 21633
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||||||||||||||||| ||||||||||    
T  21665 tctaaggtaagggtgggactagctttctctaat 21633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 22058 - 21967
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  22058 ttgattgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaat 21967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 9961 - 9912
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9961 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtg 9912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 14584 - 14793
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgtt- 107  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||  |||||| ||| |||  ||     
T  14584 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaa-at--ttgtagttg--ttgttagttttgatgatta 14678  T
Q  108 gagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatag 207  Q
    ||| |||||||||||| |    |  ||||||||||| |||||||||||||||| || || |||  ||| |||||  |||||||||||||||||| |||||    
T  14679 gag-aaattaggttttgg--tttggaattgattgtt-aaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaataaacatag 14774  T
Q  208 gtagagttttctatcaaat 226  Q
    || |||||| |||||||||    
T  14775 gttgagtttcctatcaaat 14793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 23642 - 23851
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgtt- 107  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||  |||||| ||| |||  ||     
T  23642 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaa-at--ttgtagttg--ttgttagttttgatgatta 23736  T
Q  108 gagaaaattaggtttttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcatag 207  Q
    ||| |||||||||||| |    |  ||||||||||| |||||||||||||||| || || |||  ||| |||||  |||||||||||||||||| |||||    
T  23737 gag-aaattaggttttgg--tttggaattgattgtt-aaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaataaacatag 23832  T
Q  208 gtagagttttctatcaaat 226  Q
    || |||||| |||||||||    
T  23833 gttgagtttcctatcaaat 23851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 2074 - 1994
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  2074 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 1994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 2e-26; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 16417 - 16609
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgttaatttagattgttg 108  Q
    ||||||||||||||| || ||  ||| ||||||||||||||||||||||||||||||||||||||| | || |||||||||  |||   |  ||||   |    
T  16417 tctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgat--gatta--g 16512  T
Q  109 agaaaattaggtttttgaaactaaaattgatt-gttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcata 206  Q
    ||||| ||||| ||  || | ||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||| |||||| ||||||||||||    
T  16513 agaaa-ttagggtta-gagattaaaattgatttgttgaaagagtaggtaatatgatgaattagggtaataattggtgtttaggttgcagaataatcata 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 18815 - 18892
Alignment:
Q  130 taaaattgatt-gttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcata 206  Q
    ||||||||||| |||||||||||||||||| | ||||| || |||||||||||||||| |||||| ||||| ||||||    
T  18815 taaaattgatttgttgaaagagtaggtaatataatgaattagggtaataattggtgtttaggttggagaatgatcata 18892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 18699 - 18762
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggttta 72  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||||||||||| ||||| ||||||    
T  18699 tctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggttta 18762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 18976 - 19067
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| ||||||||||  |||||||||  ||| ||| | |||||||||||||||||||  ||||||   |||| |||||||||    
T  18976 ttgattgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaat 19067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 186194 - 186274
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  186194 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 186274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 18328 - 18249
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 18249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14003 - 13938
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  14003 tctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaac 13938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 13873 - 13793
Alignment:
Q  146 aagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||| |||||||||||| |  |||||||||||||||  | |||| ||| |||||||||||  ||||| |||||||||    
T  13873 aagagtagataatctgatgaattggggtaataattggtgtcaaagttgcagattaatcataggttaagtttcctatcaaat 13793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 3420 - 3500
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| | || |||||||||    
T  3420 tctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgtt 3500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 5614 - 5693
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  5614 tctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattctgaaataggatttaacatggttgttgttgttt 5693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 43785 - 43860
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  43785 tctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattctgaaatagggtttaacatggttgttgtt 43860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 39093 - 39172
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttt 90  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||    
T  39093 tctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattatgaaatacggtgtaacatggttgttgttgttt 39172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 17519 - 17599
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| | || |||||||||    
T  17519 tctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgtt 17599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 1128 - 1065
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaac 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 106277 - 106368
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||||| ||||||| |||||  ||||| |||||||||    
T  106277 ttgattgttgaaagagaaggtaatttgatgaattaaggtaataattattgttcaggttgtaaaataatcgtaggttaagtttcctatcaaat 106368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 2454 - 2508
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa 65  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaa 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5685 - 5631
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaa 65  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaa 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 127341 - 127423
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    |||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||| ||||||||||||    ||||||||||||||    
T  127341 tctaaggtaagggtgggactagctttctctaataatggattgtatgattctaaaaaggggtttaacatg----ttgttgttttgtta 127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 4988 - 4926
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  4988 taaggtaagggtgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaac 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 10999 - 10926
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  10999 taaggtaagggtggaactagctttctctaataatgggttgtatgattct-aaaaagggtttaacat-gttgttgtt 10926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 18638 - 18719
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgt-ataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||| |||||||| | || |||||||||    
T  18638 tctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgtt 18719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 18769 - 18849
Alignment:
Q  146 aagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||| ||| |||||||||||| || ||||||||||||||| || |||| ||| | |||||||||  ||||| |||||||||    
T  18769 aagactagataatctgatgaattagggtaataattggtgtccaagttgcagatttatcataggttaagtttcctatcaaat 18849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 426 - 361
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||| || |||||||    
T  426 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 1958 - 2031
Alignment:
Q  137 gattgttgaaaga-gtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||| |||| |||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  1958 gattgttggaagaagtagataatctgatgaattaaggtaataagtggtgttcatgttgtagaataatcataggt 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23596 - 23527
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtt 70  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||| |||| |||||    
T  23596 tcatcaatactaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggtt 23527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 23446 - 23395
Alignment:
Q  169 aaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||||||| ||||    
T  23446 aaggtaataattg-tgttcaaattgtagaataatcataggaagagtttcctat 23395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15614 - 15693
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||| | |||||||||||||| |||||| ||||| |||||||||||||| | || |||||||||    
T  15614 tctaaggtaagggtgggacta-acttctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgtt 15693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 2199 - 2278
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||  ||||||||||  |  |||||||||||||||||||||||||||| | || |||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgtt 2278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 11160 - 11240
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgttttgtta 95  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||| ||||||| ||||    ||||||||||||||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttatcatg----ttgttgttttgtta 11240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 40161 - 40085
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgtt 86  Q
    |||||||||||| || |||||  |||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  40161 tctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgtt 40085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 117358 - 117293
Alignment:
Q  144 gaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggt 209  Q
    |||||||||| |||||||||||| ||| ||||||  ||||||||| ||||||||||||||||||||    
T  117358 gaaagagtagataatctgatgaattaaagtaataggtggtgttcaagttgtagaataatcataggt 117293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 17938 - 18018
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||||||  ||||||||||  |  ||||||||||||||||||||| |||||| | || |||||||||    
T  17938 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgtt 18018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 6472 - 6408
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaa 73  Q
    ||||||||||||||  |||||| |||||||||||||| ||||| |||||||||||||||| ||||    
T  6472 tctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaa 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 6365 - 6303
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  6365 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 26781 - 26701
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||| ||||||||||||| ||  ||||||||||  | ||||||||||||||||||||||||||||| | || |||||||||    
T  26781 tctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaactttgtagttgttgtt 26701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 26627 - 26536
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||| ||||||| ||| ||||||||||||| ||| || | | ||| |||| |||||||||| ||| | ||||||  ||||||||||||||    
T  26627 ttgattcttgaaagtgtaagtaatctgatgaattaatgtgaaagttgatgtttaggttgtagagtaaccctaggtaatgttttctatcaaat 26536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 5269 - 5226
Alignment:
Q  46 ggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  5269 ggttgtataattctgaaacagggtttaacatggttgttgttgtt 5226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 5304 - 5383
Alignment:
Q  10 ctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||||||||  ||||||||||  |  ||||||||||||| |||||||||||||| | || |||||||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgttgtt 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 28650 - 28583
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataat 202  Q
    |||||||||||||| ||||||||||| ||||| |||  ||| ||||| ||||||||||||||||||||    
T  28650 ttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataat 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 8913 - 8999
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||||||||| |||||||||| ||  ||||| ||| |||| ||||| ||||||||||||||||||| | ||||| |||||| ||||    
T  8913 ttgattgttgagagagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataaacttaggttgagtttcctat 8999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 8744 - 8805
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtt 70  Q
    ||||||||||||||| |||||| || ||||||||||||||||||| ||||| |||| |||||    
T  8744 tctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggtt 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 12179 - 12086
Alignment:
Q  132 aaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||| ||||||||||||| |  ||||| |||  ||| ||||| |||||||||||||||||||||||||||   |||| |||||||||    
T  12179 aaattgattgtt-aaagagtaggtaacccaatgaattaacataagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaat 12086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 4370 - 4326
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    |||||||||||||||||| || |||||||||| ||||| ||||||    
T  4370 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaa 4326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 17043 - 16977
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||||||||||||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||    
T  17043 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 16977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 26574 - 26508
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    |||||||||||||||||||||||||  ||||| |||  ||| ||||| |||||||||||||||||||    
T  26574 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 26508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 169389 - 169328
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggt 183  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | |||||||||    
T  169389 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggt 169328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 19261 - 19196
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaac 74  Q
    ||||| |||||||||||||||  ||||||||||  |  ||||||||||||||||||||||||||||    
T  19261 tctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 19196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 10636 - 10572
Alignment:
Q  22 tgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 87  Q
    ||||||||| |||||||||  |||| ||||||||||||||||||||||||||||| || |||||||    
T  10636 tgggactagctttctctaaagatgg-ttgtataattctgaaaaagggtttaacattgtagttgttg 10572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 62667 - 62605
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| || | | ||||||||||    
T  62667 tttgaaactaaaattgattgtagaaagagtagataatccgatgaattaggttgataattggtg 62605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 21895 - 21984
Alignment:
Q  136 tgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||| ||||||||||||||   ||||| |||  ||| ||||| |||||||| |||||||||| ||||||| |||||| |||||||||    
T  21895 tgattgtt-aaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaat 21984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 33403 - 33341
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||| || | | ||||||||||    
T  33403 tttgaaactaaaattgattgttgaaatagtagataatccgatgaattaggttgataattggtg 33341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 971 - 922
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| |||||    
T  971 aattgatgttcaggttgtagaataatcataggttaagttttctaacaaat 922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 8897 - 8805
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  8897 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9022 - 8982
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  9022 tcatcaatactaaggtaagggtgggactaactttctctaat 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 8059 - 8010
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||||||||    
T  8059 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaat 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 21034 - 20942
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  21034 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 20942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21159 - 21119
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  21159 tcatcaatactaaggtaagggtgggactaactttctctaat 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34174 - 34134
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  34174 tcatcaatactaaggtaagggtgggactaactttctctaat 34134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 1874 - 1782
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  1874 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 72332 - 72283
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| |||||    
T  72332 aattgatgttcaggttgtagaataatcataggttaagttttctaacaaat 72283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 69968 - 70060
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| |||||||||||||||  ||||| |||  ||| |||||  ||||||| ||||||| ||  |||||| |||||| |||||||||    
T  69968 aattgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaat 70060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 69843 - 69883
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  69843 tcatcaatactaaggtaagggtgggactaactttctctaat 69883  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 29331 - 29423
Alignment:
Q  133 aattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||| ||||||||||||||   ||||| |||  ||| |||||  ||||||| |||||||||| ||||||| |||||| |||||||||    
T  29331 aattgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 29423  T

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Target: scaffold1941 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 192 - 124
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatg 77  Q
    |||||||||||||||||||||  ||||||||||  |  |||||||||||||||||  | ||||||||||    
T  192 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatg 124  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 9990 - 9942
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaa 225  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||||||||    
T  9990 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaa 9942  T

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Target: scaffold0125 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 28485 - 28397
Alignment:
Q  138 attgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||| |||||||||||||||  || || ||  |||  ||||| || |||||||||||||||| |||||| |||||||||||| ||||    
T  28485 attgttaaaagagtaggtaatccaattaattagtgtacaaattgatggtcaggttgtagaataaacataggaagagttttctataaaat 28397  T

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Target: scaffold0125; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 1207 - 1256
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||| |||||    
T  1207 aattgatgttcaggttgtagaataatcataggttaagtttcctaacaaat 1256  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 39969 - 40017
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaa 225  Q
    ||||| |||||||||||||||||||||||||||  ||||| ||||||||    
T  39969 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaa 40017  T

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Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 59771 - 59837
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtagaataa 201  Q
    ||||||||||||| |||||||||||  ||||| |||  ||| ||||| |||| ||||||||||||||    
T  59771 ttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataa 59837  T

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Target: scaffold1939 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 67 - 1
Alignment:
Q  131 aaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtgttcaggttgtaga 197  Q
    |||||||||||||||||||||||||||||  | ||| |||  ||| ||||| |||||| ||||||||    
T  67 aaaattgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

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Target: scaffold1800 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 544 - 451
Alignment:
Q  135 ttgattgttgaaagagtaggtaatctgatgaactaaggtaata--attggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    |||||||||||||| |||||||||   ||||| |||  |||||  |||| ||||| |||||||||||||  |||||||  ||||||||||||||    
T  544 ttgattgttgaaagtgtaggtaattcaatgaattaatataatacaattgatgttcgggttgtagaataacaataggtaatgttttctatcaaat 451  T

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Target: scaffold0371 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 10549 - 10611
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    ||||||||||||||||||||| |||||||||| ||||  |||||| || | | ||||||||||    
T  10549 tttgaaactaaaattgattgtagaaagagtagataatacgatgaattaggttgataattggtg 10611  T

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Target: scaffold0112 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 2943 - 2889
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||| ||  ||||||||||  | ||||||||||||||||||    
T  2943 tctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 2889  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 10031 - 10093
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggtg 184  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | ||||||||||    
T  10031 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggtg 10093  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 169328 - 169286
Alignment:
Q  184 gttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||||  ||||| |||||||||    
T  169328 gttcaggttgtagaataatcataggttaagtttcctatcaaat 169286  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 176681 - 176639
Alignment:
Q  184 gttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||||||||||||||||||||||||  ||||| |||||||||    
T  176681 gttcaggttgtagaataatcataggttaagtttcctatcaaat 176639  T

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Target: scaffold0956 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 2252 - 2301
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||| ||||  ||||| |||||||||    
T  2252 aattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaat 2301  T

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Target: scaffold0401 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 8770 - 8709
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaactaaggtaataattggt 183  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| || | | |||||||||    
T  8770 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaattaggttgataattggt 8709  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 12945 - 12896
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||| ||||||||||||||||||||  ||||||||| |||||    
T  12945 aattgatgttcatgttgtagaataatcataggttaagttttctaacaaat 12896  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 8986 - 8937
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctatcaaat 226  Q
    ||||| |||||||||||||||||||||||| ||  ||||| |||||||||    
T  8986 aattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaat 8937  T

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Target: scaffold1633 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 1257 - 1205
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 468 - 520
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

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Target: scaffold0515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5091 - 5051
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  5091 tcatcaatactaaggtaagggtgggactaactttctctaat 5051  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5091 - 5051
Alignment:
Q  1 tcatcaattctaaggtaagggtgggactagatttctctaat 41  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  5091 tcatcaatactaaggtaagggtgggactaactttctctaat 5051  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 35386 - 35342
Alignment:
Q  177 aattggtgttcaggttgtagaataatcataggtagagttttctat 221  Q
    ||||| ||||||||||||||||||| ||||||| |||||| ||||    
T  35386 aattgatgttcaggttgtagaataaacataggttgagtttcctat 35342  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 78185 - 78237
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 61846 - 61925
Alignment:
Q  9 tctaaggtaagggtgggactagatttctctaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 89  Q
    ||||||||||||||| |||||  ||||||||||  |  |||||||||||||| |||||| |||||| | || |||||||||    
T  61846 tctaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaaaggatttaaccttgtagttgttgtt 61925  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 174170 - 174126
Alignment:
Q  122 tttgaaactaaaattgattgttgaaagagtaggtaatctgatgaa 166  Q
    |||||||||||||||||| || |||||||||| ||||| ||||||    
T  174170 tttgaaactaaaattgatcgtagaaagagtagataatccgatgaa 174126  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 24131 - 24183
Alignment:
Q  11 taaggtaagggtgggactagatttctctaataatgggttgtataattctgaaa 63  Q
    |||||||||||||||||||  ||||||||||  |  |||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

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