View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6657_low_5 (Length: 311)

Name: NF6657_low_5
Description: NF6657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6657_low_5
NF6657_low_5
[»] chr5 (56 HSPs)
chr5 (15-203)||(14980006-14980194)
chr5 (15-195)||(43257815-43257998)
chr5 (15-236)||(36660392-36660623)
chr5 (15-202)||(166604-166803)
chr5 (15-115)||(4967446-4967546)
chr5 (15-125)||(31889807-31889917)
chr5 (15-202)||(34919752-34919933)
chr5 (18-202)||(4011618-4011790)
chr5 (15-147)||(12167565-12167700)
chr5 (15-202)||(31557295-31557489)
chr5 (18-202)||(7388150-7388335)
chr5 (15-195)||(36783361-36783553)
chr5 (14-199)||(16886087-16886268)
chr5 (32-195)||(33693746-33693911)
chr5 (72-202)||(42329556-42329700)
chr5 (15-195)||(15400177-15400370)
chr5 (15-202)||(4751485-4751685)
chr5 (31-128)||(39059890-39059987)
chr5 (72-235)||(793616-793793)
chr5 (15-125)||(27652274-27652384)
chr5 (15-202)||(4742221-4742421)
chr5 (36-125)||(8961011-8961099)
chr5 (43-202)||(27810345-27810517)
chr5 (135-202)||(13066712-13066780)
chr5 (135-202)||(29653600-29653668)
chr5 (15-120)||(1513072-1513177)
chr5 (72-125)||(33822513-33822566)
chr5 (51-241)||(33584964-33585168)
chr5 (72-125)||(34171251-34171304)
chr5 (135-202)||(4371362-4371430)
chr5 (135-202)||(38982231-38982299)
chr5 (138-236)||(33822592-33822691)
chr5 (135-202)||(12992063-12992129)
chr5 (135-236)||(17674173-17674275)
chr5 (73-122)||(29044811-29044860)
chr5 (135-202)||(4833719-4833787)
chr5 (159-202)||(27658682-27658726)
chr5 (72-124)||(36296144-36296196)
chr5 (74-125)||(29653526-29653577)
chr5 (18-72)||(24436498-24436552)
chr5 (135-241)||(32963095-32963199)
chr5 (15-125)||(4371451-4371548)
chr5 (86-123)||(4833657-4833694)
chr5 (139-199)||(32690821-32690882)
chr5 (138-202)||(34171163-34171227)
chr5 (83-120)||(38982168-38982205)
chr5 (135-202)||(39059805-39059872)
chr5 (141-202)||(31889741-31889804)
chr5 (82-125)||(32690753-32690796)
chr5 (136-202)||(33741464-33741531)
chr5 (141-199)||(41845374-41845433)
chr5 (11-84)||(17674329-17674402)
chr5 (135-195)||(28640088-28640149)
chr5 (74-119)||(32963022-32963066)
chr5 (81-122)||(33741556-33741597)
chr5 (32-92)||(8755591-8755651)
[»] chr3 (74 HSPs)
chr3 (15-236)||(26965463-26965687)
chr3 (15-201)||(27483148-27483337)
chr3 (18-202)||(2567970-2568157)
chr3 (15-236)||(34059840-34060063)
chr3 (18-202)||(37225553-37225749)
chr3 (15-203)||(19552538-19552730)
chr3 (15-203)||(36771531-36771722)
chr3 (18-195)||(1340887-1341067)
chr3 (15-236)||(25061670-25061891)
chr3 (15-202)||(44648365-44648555)
chr3 (15-236)||(647547-647779)
chr3 (15-203)||(790094-790270)
chr3 (20-162)||(40048925-40049067)
chr3 (15-201)||(38457460-38457658)
chr3 (15-202)||(46362965-46363165)
chr3 (20-201)||(53716029-53716196)
chr3 (15-202)||(83295-83493)
chr3 (14-125)||(2662446-2662557)
chr3 (15-195)||(31290929-31291111)
chr3 (18-197)||(35239390-35239556)
chr3 (15-203)||(43580473-43580677)
chr3 (18-119)||(44854409-44854508)
chr3 (51-202)||(54933194-54933359)
chr3 (32-203)||(9167661-9167831)
chr3 (16-111)||(38165617-38165712)
chr3 (85-236)||(43599855-43600009)
chr3 (36-128)||(41287163-41287255)
chr3 (32-195)||(42740238-42740403)
chr3 (15-125)||(27039415-27039524)
chr3 (15-125)||(5244673-5244782)
chr3 (32-113)||(43736842-43736922)
chr3 (72-236)||(43169299-43169477)
chr3 (72-202)||(2988620-2988763)
chr3 (32-195)||(4476334-4476498)
chr3 (15-125)||(20512449-20512559)
chr3 (15-125)||(54261505-54261615)
chr3 (51-199)||(25722450-25722612)
chr3 (72-125)||(51381814-51381867)
chr3 (18-199)||(22414757-22414948)
chr3 (15-202)||(27027732-27027933)
chr3 (153-236)||(13485909-13485993)
chr3 (51-125)||(43687872-43687946)
chr3 (20-195)||(45095559-45095723)
chr3 (135-197)||(52222831-52222892)
chr3 (20-125)||(4391992-4392088)
chr3 (138-202)||(22730924-22730989)
chr3 (135-203)||(32303991-32304060)
chr3 (72-125)||(53560754-53560807)
chr3 (18-110)||(22731035-22731126)
chr3 (72-199)||(44645340-44645481)
chr3 (83-125)||(3000841-3000883)
chr3 (136-200)||(35099453-35099518)
chr3 (138-202)||(36310339-36310404)
chr3 (22-125)||(43600152-43600257)
chr3 (135-202)||(54261414-54261482)
chr3 (72-119)||(42007072-42007119)
chr3 (83-125)||(16240664-16240706)
chr3 (135-236)||(36541455-36541558)
chr3 (72-121)||(32303915-32303964)
chr3 (72-125)||(36541581-36541634)
chr3 (135-202)||(43687969-43688040)
chr3 (135-202)||(51381720-51381789)
chr3 (32-83)||(43599520-43599571)
chr3 (140-202)||(49470788-49470851)
chr3 (138-202)||(20512585-20512651)
chr3 (141-202)||(52202383-52202445)
chr3 (135-203)||(5244584-5244652)
chr3 (83-120)||(35099389-35099426)
chr3 (135-199)||(43600277-43600341)
chr3 (135-195)||(41287082-41287145)
chr3 (15-71)||(42857046-42857102)
chr3 (138-201)||(42857148-42857212)
chr3 (139-202)||(50420258-50420321)
chr3 (140-203)||(53560663-53560726)
[»] chr4 (61 HSPs)
chr4 (18-236)||(52732560-52732782)
chr4 (15-203)||(43421082-43421273)
chr4 (17-179)||(34360033-34360197)
chr4 (20-236)||(51930561-51930765)
chr4 (32-202)||(15501129-15501302)
chr4 (15-195)||(54512034-54512217)
chr4 (15-203)||(21045150-21045327)
chr4 (15-125)||(44855328-44855438)
chr4 (15-202)||(32140944-32141119)
chr4 (22-236)||(50072242-50072438)
chr4 (15-202)||(36805408-36805600)
chr4 (15-236)||(31817157-31817365)
chr4 (20-202)||(19849079-19849273)
chr4 (32-202)||(37445655-37445837)
chr4 (15-114)||(56422957-56423056)
chr4 (19-202)||(39671068-39671238)
chr4 (15-125)||(34096100-34096210)
chr4 (15-202)||(22212336-22212535)
chr4 (18-125)||(45520419-45520526)
chr4 (51-202)||(24259606-24259771)
chr4 (18-203)||(30022062-30022258)
chr4 (15-121)||(42672477-42672583)
chr4 (48-239)||(35928449-35928650)
chr4 (15-202)||(56556237-56556410)
chr4 (72-202)||(45889559-45889702)
chr4 (134-202)||(6462004-6462073)
chr4 (73-125)||(54233902-54233954)
chr4 (18-125)||(3093433-3093539)
chr4 (18-199)||(11835105-11835295)
chr4 (72-202)||(31941553-31941697)
chr4 (15-125)||(34124381-34124491)
chr4 (15-203)||(47321138-47321341)
chr4 (74-202)||(17499732-17499874)
chr4 (72-199)||(28116243-28116384)
chr4 (18-82)||(45903377-45903441)
chr4 (51-125)||(4408169-4408243)
chr4 (138-202)||(19282501-19282567)
chr4 (135-236)||(29840036-29840139)
chr4 (19-129)||(38761788-38761898)
chr4 (21-125)||(29289852-29289959)
chr4 (83-195)||(31987306-31987430)
chr4 (72-125)||(51434270-51434323)
chr4 (83-125)||(38692474-38692516)
chr4 (15-104)||(51737280-51737367)
chr4 (135-203)||(34124289-34124358)
chr4 (15-193)||(30492732-30492914)
chr4 (135-202)||(51434346-51434414)
chr4 (72-123)||(6462102-6462153)
chr4 (74-237)||(6510078-6510253)
chr4 (15-125)||(17317805-17317910)
chr4 (78-123)||(34534111-34534157)
chr4 (142-199)||(45903501-45903559)
chr4 (72-121)||(55126587-55126636)
chr4 (136-195)||(45520548-45520607)
chr4 (153-203)||(6232141-6232192)
chr4 (141-203)||(38692408-38692471)
chr4 (153-201)||(17317950-17317999)
chr4 (15-63)||(29840201-29840249)
chr4 (135-182)||(44835350-44835398)
chr4 (135-202)||(54091953-54092021)
chr4 (73-125)||(55548234-55548286)
[»] chr2 (47 HSPs)
chr2 (15-180)||(40410473-40410640)
chr2 (17-241)||(29795156-29795383)
chr2 (15-195)||(40987237-40987418)
chr2 (35-202)||(1381748-1381916)
chr2 (15-202)||(4840682-4840881)
chr2 (15-200)||(7743401-7743598)
chr2 (32-241)||(4766184-4766380)
chr2 (18-125)||(1298738-1298845)
chr2 (32-197)||(36360347-36360522)
chr2 (32-236)||(4536538-4536742)
chr2 (18-202)||(34225771-34225944)
chr2 (21-125)||(43460860-43460961)
chr2 (31-117)||(14378219-14378305)
chr2 (15-125)||(24775276-24775386)
chr2 (15-125)||(37106949-37107061)
chr2 (58-125)||(16316796-16316863)
chr2 (15-236)||(43388612-43388845)
chr2 (32-195)||(42969904-42970069)
chr2 (135-203)||(33093365-33093434)
chr2 (135-202)||(18374850-18374918)
chr2 (15-202)||(14698010-14698187)
chr2 (32-125)||(43344195-43344288)
chr2 (51-122)||(775875-775946)
chr2 (72-202)||(2459771-2459915)
chr2 (51-125)||(4566112-4566186)
chr2 (14-116)||(11171839-11171941)
chr2 (83-202)||(1360175-1360306)
chr2 (135-202)||(10580944-10581012)
chr2 (72-202)||(41984416-41984561)
chr2 (72-125)||(25332659-25332712)
chr2 (72-125)||(39866683-39866736)
chr2 (73-125)||(10580869-10580921)
chr2 (19-69)||(44228609-44228659)
chr2 (139-199)||(16316710-16316771)
chr2 (135-202)||(775972-776039)
chr2 (72-124)||(33093458-33093510)
chr2 (141-195)||(14378316-14378371)
chr2 (152-202)||(45148055-45148106)
chr2 (154-199)||(1298885-1298931)
chr2 (153-202)||(6591963-6592013)
chr2 (138-195)||(39866762-39866820)
chr2 (138-202)||(43344312-43344375)
chr2 (83-120)||(14511552-14511589)
chr2 (135-203)||(24775186-24775255)
chr2 (136-177)||(37106886-37106927)
chr2 (140-203)||(25332568-25332631)
chr2 (66-125)||(45147982-45148042)
[»] scaffold0072 (1 HSPs)
scaffold0072 (18-195)||(12040-12219)
[»] chr7 (48 HSPs)
chr7 (20-236)||(28044101-28044319)
chr7 (16-203)||(36447567-36447757)
chr7 (15-203)||(18886667-18886843)
chr7 (15-202)||(32275203-32275393)
chr7 (15-203)||(41905890-41906089)
chr7 (19-196)||(22627313-22627495)
chr7 (18-203)||(33056242-33056433)
chr7 (15-202)||(42121549-42121740)
chr7 (15-192)||(34002087-34002277)
chr7 (15-203)||(17869235-17869435)
chr7 (49-236)||(40207379-40207566)
chr7 (22-128)||(34733394-34733500)
chr7 (15-202)||(3680878-3681077)
chr7 (16-203)||(1103482-1103681)
chr7 (15-236)||(40298812-40299036)
chr7 (32-125)||(42259521-42259614)
chr7 (51-202)||(26963478-26963643)
chr7 (15-203)||(32345789-32345991)
chr7 (138-247)||(36836013-36836123)
chr7 (72-202)||(19906413-19906555)
chr7 (18-117)||(26527356-26527454)
chr7 (38-125)||(42010553-42010640)
chr7 (135-236)||(22597195-22597297)
chr7 (138-202)||(30514972-30515037)
chr7 (15-125)||(48838635-48838750)
chr7 (51-125)||(10684820-10684894)
chr7 (51-125)||(39117479-39117553)
chr7 (135-236)||(19288434-19288536)
chr7 (135-203)||(43813431-43813500)
chr7 (73-242)||(29001577-29001736)
chr7 (73-202)||(31416763-31416906)
chr7 (72-125)||(6521907-6521960)
chr7 (136-241)||(10684918-10685024)
chr7 (72-125)||(19277057-19277110)
chr7 (31-128)||(30833066-30833162)
chr7 (74-202)||(36447083-36447225)
chr7 (135-199)||(42044066-42044131)
chr7 (51-124)||(47272240-47272313)
chr7 (32-128)||(33845391-33845478)
chr7 (135-195)||(19920358-19920419)
chr7 (85-128)||(18733540-18733583)
chr7 (87-125)||(5723090-5723128)
chr7 (153-202)||(18733452-18733502)
chr7 (135-236)||(42259635-42259736)
chr7 (135-198)||(5723006-5723069)
chr7 (74-125)||(36836148-36836199)
chr7 (135-195)||(26527483-26527544)
chr7 (21-62)||(32873127-32873168)
[»] chr1 (56 HSPs)
chr1 (15-202)||(48259818-48260008)
chr1 (16-202)||(11650056-11650254)
chr1 (15-199)||(40060861-40061048)
chr1 (19-202)||(24040983-24041155)
chr1 (15-202)||(84473-84648)
chr1 (16-125)||(52403563-52403672)
chr1 (15-201)||(1430491-1430666)
chr1 (15-202)||(43929683-43929881)
chr1 (18-236)||(5317535-5317765)
chr1 (15-158)||(30006182-30006327)
chr1 (20-201)||(1428865-1429059)
chr1 (15-241)||(28751363-28751602)
chr1 (15-125)||(10690910-10691020)
chr1 (15-128)||(6332251-6332364)
chr1 (15-202)||(12002244-12002443)
chr1 (32-199)||(17919793-17919971)
chr1 (15-182)||(37437358-37437529)
chr1 (20-125)||(43105562-43105667)
chr1 (15-236)||(50349812-50350046)
chr1 (15-203)||(2459005-2459203)
chr1 (72-202)||(38132202-38132322)
chr1 (73-199)||(44582791-44582931)
chr1 (31-115)||(45749470-45749554)
chr1 (72-202)||(26252116-26252260)
chr1 (18-120)||(2245880-2245982)
chr1 (58-202)||(22664937-22665091)
chr1 (75-202)||(254926-255068)
chr1 (83-202)||(12851739-12851870)
chr1 (53-236)||(43755017-43755187)
chr1 (51-199)||(49894807-49894943)
chr1 (15-115)||(44583869-44583968)
chr1 (40-202)||(48319981-48320144)
chr1 (77-236)||(17806392-17806563)
chr1 (18-84)||(50158276-50158342)
chr1 (32-195)||(40719020-40719195)
chr1 (72-125)||(42650261-42650314)
chr1 (135-199)||(45377236-45377301)
chr1 (74-125)||(5854238-5854289)
chr1 (79-125)||(672300-672346)
chr1 (15-202)||(15698705-15698905)
chr1 (72-125)||(28200234-28200287)
chr1 (73-125)||(9552368-9552420)
chr1 (135-202)||(44024543-44024611)
chr1 (20-123)||(43738214-43738317)
chr1 (75-117)||(35149394-35149436)
chr1 (140-199)||(50158397-50158458)
chr1 (155-202)||(9552436-9552484)
chr1 (51-123)||(50591309-50591381)
chr1 (141-202)||(26582923-26582985)
chr1 (135-195)||(2245791-2245852)
chr1 (135-203)||(5854312-5854381)
chr1 (213-242)||(48260021-48260050)
chr1 (136-202)||(15647150-15647215)
chr1 (138-182)||(42650339-42650383)
chr1 (139-202)||(43738344-43738408)
chr1 (136-203)||(44583769-44583837)
[»] chr6 (29 HSPs)
chr6 (20-239)||(1924634-1924855)
chr6 (32-202)||(12828653-12828835)
chr6 (15-241)||(29915499-29915740)
chr6 (15-202)||(31275596-31275796)
chr6 (18-197)||(26669056-26669247)
chr6 (15-239)||(23936538-23936773)
chr6 (15-202)||(29927205-29927405)
chr6 (15-202)||(32258720-32258910)
chr6 (20-121)||(34439368-34439470)
chr6 (72-202)||(17345146-17345290)
chr6 (138-202)||(6143082-6143147)
chr6 (74-202)||(34576542-34576684)
chr6 (135-202)||(4123941-4124009)
chr6 (135-202)||(11785189-11785255)
chr6 (59-125)||(10494760-10494827)
chr6 (15-123)||(4131903-4132008)
chr6 (135-247)||(30627044-30627157)
chr6 (138-202)||(34439503-34439567)
chr6 (135-202)||(4132061-4132129)
chr6 (72-202)||(26189506-26189651)
chr6 (137-202)||(10494850-10494916)
chr6 (138-202)||(6140598-6140662)
chr6 (72-125)||(25932718-25932771)
chr6 (72-107)||(6992508-6992543)
chr6 (32-119)||(30627184-30627262)
chr6 (153-197)||(3015919-3015964)
chr6 (22-71)||(19689809-19689858)
chr6 (20-123)||(4123815-4123918)
chr6 (135-202)||(8052343-8052410)
[»] chr8 (52 HSPs)
chr8 (15-202)||(7612496-7612694)
chr8 (15-236)||(38329010-38329218)
chr8 (15-239)||(45187251-45187476)
chr8 (74-236)||(1774085-1774248)
chr8 (15-203)||(27109775-27109976)
chr8 (32-236)||(22601100-22601315)
chr8 (18-124)||(2067788-2067894)
chr8 (15-202)||(9022393-9022593)
chr8 (43-236)||(29931224-29931419)
chr8 (15-128)||(32326680-32326793)
chr8 (16-202)||(36915365-36915561)
chr8 (15-125)||(6839294-6839404)
chr8 (51-199)||(16208951-16209102)
chr8 (15-125)||(11335994-11336098)
chr8 (72-197)||(34168224-34168355)
chr8 (18-199)||(7129302-7129476)
chr8 (49-199)||(18666534-18666672)
chr8 (32-201)||(30788934-30789115)
chr8 (72-202)||(8471279-8471399)
chr8 (83-202)||(156239-156358)
chr8 (32-195)||(41414847-41415012)
chr8 (16-117)||(32737861-32737961)
chr8 (16-81)||(24732079-24732144)
chr8 (51-202)||(14541737-14541900)
chr8 (15-125)||(11257627-11257736)
chr8 (32-125)||(41790113-41790206)
chr8 (82-203)||(2803268-2803393)
chr8 (73-200)||(34461595-34461737)
chr8 (74-195)||(26438980-26439102)
chr8 (138-202)||(5588563-5588628)
chr8 (18-110)||(5588426-5588517)
chr8 (135-200)||(3095590-3095656)
chr8 (72-122)||(27416593-27416643)
chr8 (20-73)||(2812915-2812968)
chr8 (83-195)||(8382501-8382625)
chr8 (72-125)||(13109076-13109129)
chr8 (32-125)||(39970412-39970496)
chr8 (51-123)||(5044218-5044290)
chr8 (19-119)||(42709949-42710048)
chr8 (82-192)||(8107191-8107304)
chr8 (135-199)||(27416502-27416565)
chr8 (138-199)||(33870755-33870817)
chr8 (141-202)||(35052469-35052531)
chr8 (153-198)||(2067725-2067770)
chr8 (135-202)||(39970323-39970390)
chr8 (135-202)||(42946120-42946188)
chr8 (15-69)||(32061414-32061468)
chr8 (87-125)||(32661392-32661430)
chr8 (15-72)||(3095468-3095525)
chr8 (143-199)||(13108989-13109045)
chr8 (135-180)||(32661326-32661371)
chr8 (140-202)||(11257540-11257601)
[»] scaffold0119 (1 HSPs)
scaffold0119 (18-197)||(1546-1737)
[»] scaffold0580 (2 HSPs)
scaffold0580 (18-97)||(1689-1768)
scaffold0580 (18-97)||(9428-9507)
[»] scaffold0238 (1 HSPs)
scaffold0238 (15-125)||(15995-16104)
[»] scaffold0047 (1 HSPs)
scaffold0047 (72-202)||(70465-70609)
[»] scaffold0194 (2 HSPs)
scaffold0194 (15-84)||(8277-8346)
scaffold0194 (140-202)||(8156-8221)
[»] scaffold0003 (2 HSPs)
scaffold0003 (135-202)||(321724-321792)
scaffold0003 (72-125)||(321815-321868)
[»] scaffold0886 (2 HSPs)
scaffold0886 (15-125)||(4063-4174)
scaffold0886 (135-202)||(4195-4263)
[»] scaffold0189 (1 HSPs)
scaffold0189 (15-236)||(13023-13247)
[»] scaffold0007 (1 HSPs)
scaffold0007 (83-117)||(158195-158229)
[»] scaffold0519 (1 HSPs)
scaffold0519 (92-125)||(7732-7765)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 14980006 - 14980194
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980006 cacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 14980105  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||| || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  14980106 attgtgaga-aaaagttggagagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 14980194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 43257815 - 43257998
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||  |||  ||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  43257815 cacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgcccttactttataagaaatagacaaacttaaagttgcattgaaa 43257914  T
Q  115 attgtgtgagaaa--agatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||||||||  || ||  |||| |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  43257915 attgtgtgagaaaacagttgaagaggataaagttgaaagaaaaaaattaaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 36660623 - 36660392
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||| ||  |||    
T  36660623 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgtataaaaa 36660524  T
Q  115 attgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaan 204  Q
    |||||| |||||||| |||          ||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||      
T  36660523 attgtgagagaaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatt 36660424  T
Q  205 nnnnnngactaaagtgacactcattttgaaac 236  Q
          | ||||||||||||||||||||||||    
T  36660423 ttttttggctaaagtgacactcattttgaaac 36660392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 166604 - 166803
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||||||   ||||| |||||||||||| |||||||||||||||||    
T  166604 cacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtattatatgaaaaagacaaacttaaagttgcattgaaa 166703  T
Q  115 attgtgtgag--aaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||  ||||| |||          ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  166704 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 4967446 - 4967546
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4967446 cacagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaa 4967545  T
Q  115 a 115  Q
    |    
T  4967546 a 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 31889917 - 31889807
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| |||||||||||| |||| |||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31889917 cacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 31889818  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  31889817 attgtgtgaga 31889807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 34919933 - 34919752
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||| |||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||| |||       ||| | |    
T  34919933 cacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttataagaaaaagacaaactta-------attaata 34919841  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||| |||||||| || |||| || |||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  34919840 attgtgagagaaaagttgaggagagtcaagttggaagaaaaaaattaaagttatattaggaatgtaaagtgacattcattttgaaacaa 34919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 4011618 - 4011790
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||| |||| ||||||||||||||||||||  |||| | ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4011618 agattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattgaaaatt 4011717  T
Q  118 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||             ||||||||||| |||||||||||||| ||| ||||||||||| |||| |||||||| ||||||    
T  4011718 gtgtgagaaa-------------aaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 12167565 - 12167700
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  12167565 cacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttactttataagaaaaggtcaaacttaaagttgcattgaaa 12167664  T
Q  115 at---tgtgtgagaaaagatggggagggtaaagttg 147  Q
    ||   |||| |||||||| ||| |||||||||||||    
T  12167665 atttgtgtgagagaaaagttggagagggtaaagttg 12167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 31557295 - 31557489
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| |||||||||| ||||||||||||||||  |||||| |||||||  ||||  ||||| ||||||||||||||||||||| ||||||||||||||||    
T  31557295 cacatattaagaaatagaatgaaataatcattaaatataatacttttagtaaacaaccctttactttataagaaaaagacaaacttaaagttgcattgaa 31557394  T
Q  114 aattgtgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||||||| || |     |   ||   |||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  31557395 aattgtgtgagagaatagtatttattgaaaataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 7388150 - 7388335
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||| ||||  ||| ||||||||||| || |||| | |||||| ||| || ||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  7388150 agattaataaatgaaataaaataatcattagacataatatttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaatt 7388249  T
Q  118 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||| |||||||| ||  |||| ||||| ||||||  |||||||||| || ||||| |||| |||| ||||||||||||| ||||||    
T  7388250 gtgagagaaaagttgaagaggataaagatggaagataaaaattaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 36783553 - 36783361
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||| ||  ||||||||||||||| || |||||| |||||| ||| |||||||||||  || |||||||||||| |||||||||||||||||    
T  36783553 cacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttacttgttatgaaaaagacaaatttaaagttgcattgaaa 36783454  T
Q  115 attgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||  |||||||| ||| |         ||||||||||| |||| ||||||||| |||| ||||||||||||||| ||||||| |||||    
T  36783453 attgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 16886268 - 16886087
Alignment:
Q  14 gcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||||||| ||| |||  ||||||||||| ||| ||  |||||| ||||| |||||||||||||||||||| ||||        ||||||||||||||||    
T  16886268 gcacagatcaaggaatgaaatgaaataattattagacgtaacacatttactaaactgcccttactttataacaaaac-------ttaaagttgcattgaa 16886176  T
Q  114 aattgtgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||||  |||||| ||| ||||||||||||||||| |||||||||||||| ||||| ||||| |||  ||| ||||||||||||    
T  16886175 aattgtgtgatagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaagcgacgttcattttgaaa 16886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 33693911 - 33693746
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaag 129  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||||||||||  |||||    
T  33693911 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 33693813  T
Q  130 atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
     || ||| |||||| ||||||| ||||||||||||| |||||  ||||||||| ||||||| |||||    
T  33693812 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatgtaaagtgacatttatttt 33693746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 42329556 - 42329700
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    |||| ||  |         |||||||||||||||| ||||||    
T  42329556 ccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaa 42329655  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  42329656 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 15400370 - 15400177
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||| ||| | ||| ||||||||||||||||||  ||| |||||||| ||||| |    
T  15400370 cacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattgga 15400271  T
Q  114 aattg--tgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||  || |||||||| | |          |||| |||||||||||| | |||||||||||| ||||||||||||||| |||||||||||||    
T  15400270 aattgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 4751485 - 4751685
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||||  |||||  |||||| |||||| ||||| ||||||||| |||||||    
T  4751485 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaa 4751584  T
Q  115 attgtgtgag--aaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||||||  ||||| |||          |||||||||||||||||  |||||||||||||| |||| ||||| |||| |||||||||||||||||||    
T  4751585 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaaca 4751684  T
Q  202 a 202  Q
    |    
T  4751685 a 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 39059987 - 39059890
Alignment:
Q  31 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 128  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||  |||||| |||||| ||||| |||||||||||||||||||||| ||||||||    
T  39059987 gaatgaaataatcattagacataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaa 39059890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 793616 - 793793
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    |||| |   |         |||||| ||||||||| ||||||    
T  793616 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaagaaaaaaa 793715  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaa 235  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||       | |||||| ||||||||||||||||    
T  793716 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatttttttggctaaagcgacactcattttgaaa 793793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 27652274 - 27652384
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| |||| ||||| |||   |  |||||| |||||| ||| |  ||||||||||||||||||||||||| |||||||||||||||||    
T  27652274 cacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaatttaaagttgcattgaaa 27652373  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  27652374 attgtgtgaga 27652384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 4742221 - 4742421
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||  || ||||||||||||| ||||  |||||  |||||| |||||| ||||| ||||||||| |||||||    
T  4742221 cacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaa 4742320  T
Q  115 attgtgtgag--aaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||||||  ||||| |||          |||||||||||||||||  |||||||||||||| |||| ||||| |||| |||||||||||||||||||    
T  4742321 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaaca 4742420  T
Q  202 a 202  Q
    |    
T  4742421 a 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 8961011 - 8961099
Alignment:
Q  36 aaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||| || ||||||||||||| |||||| | ||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  8961011 aaataatcattagacataacacttttactaaactgtc-ttattttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgaga 8961099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 27810517 - 27810345
Alignment:
Q  43 cattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaattgtgtgagaaaaga---tggg---- 134  Q
    ||||| ||||||||||||||| |||||||| ||  |||||| |||||| || ||| ||||||||| ||||||||||||||||||||| |   || |        
T  27810517 cattgcatataacacttttactaaactgccattgttttatatgaaaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatt 27810418  T
Q  135 ----gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
        |||| |||||||| ||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  27810417 tattgaggataaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 13066780 - 13066712
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  13066780 gagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 29653600 - 29653668
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  29653600 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgcaacaa 29653668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 1513177 - 1513072
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  |||||||||||||||  | |||| ||||||  |||||| ||||||||||| |||| ||| ||||| |||||||||| ||||||    
T  1513177 cacaaattaagaaatgaaatgaaataatcattaaacataatacttttttcaaactacccttactttacaagagaaaaacaaacttaaagttgctttgaaa 1513078  T
Q  115 attgtg 120  Q
    ||||||    
T  1513077 attgtg 1513072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 33822513 - 33822566
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  33822513 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgaga 33822566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 33584964 - 33585168
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg----agaaaagatgg---------ggag 137  Q
    |||||| |||||| ||| |  |||||||||| | ||| |||||||| |||||||||||||||||||||||||    ||||||| |||          ||     
T  33584964 ataacaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaa 33585063  T
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||| |||| |||||||| ||||||          ||||||||||||||||||||||||    
T  33585064 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaattttttttatctaaagtgacactcattttgaaac 33585163  T
Q  237 agatg 241  Q
     ||||    
T  33585164 ggatg 33585168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 34171304 - 34171251
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||    
T  34171304 ccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgaga 34171251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 4371430 - 4371362
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||| | || |||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  4371430 gagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 38982231 - 38982299
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| || |||||||||||||| |||||||||| |||| ||||||||||||| ||||||    
T  38982231 gagggtaaagttgggagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 33822592 - 33822691
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||||||| ||| | |||||||||||| ||||| ||||||||| |||||||||||||||| |||        ||||||||||| ||||||||||||||    
T  33822592 ggtaaagttgaaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaatcaattttttttgactaaagtgatactcattttgaaac 33822691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 12992129 - 12992063
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||| |||||||||||  |||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  12992129 gaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 17674275 - 17674173
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttga 233  Q
    |||| ||||||| || | |||||||||||||| ||||| ||| ||||| ||||||||||||||||||||        ||||||||||||||||||||| |    
T  17674275 gaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacattcattttgaaacaattttatttgactaaagtgacactcattttaa 17674176  T
Q  234 aac 236  Q
    |||    
T  17674175 aac 17674173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 29044860 - 29044811
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 122  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  29044860 cttactttataagaataagataaacttaaagttgcattgaaaattgtgtg 29044811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 4833719 - 4833787
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||   ||||||||||||||||||    
T  4833719 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 36296144 - 36296196
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag 124  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  36296144 ccttaatttataggaacaagacaaacttaaagttgcattgaaaattgtgtgag 36296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 29653526 - 29653577
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||| |||||||| |||||||||||||  |||||||||||||    
T  29653526 ttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgaga 29653577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24436498 - 24436552
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 72  Q
    |||||||| |||  ||||||||||||||| |||||||||||||||||||| ||||    
T  24436498 agattaaggaataaaatgaaataatcattagatataacacttttaccaaaatgcc 24436552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 32963095 - 32963199
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttga 233  Q
    |||||||||||| |||  |||||| ||||||| ||||||||||||||| ||  |||||||||||||||||       ||||||||||||||||||||| |    
T  32963095 gagggtaaagtttgaa--aaaaaaataaagttgtattggaaatgtaaagtggtattcattttgaaacaaa-ctttttgactaaagtgacactcattttaa 32963191  T
Q  234 aacagatg 241  Q
    ||| ||||    
T  32963192 aacggatg 32963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 4371548 - 4371451
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| ||| |||||||||||||||| || ||| ||||||||| ||||||||         ||||||||||||||    |||||||||||||||    
T  4371548 cacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaactgcc---------taagaaaaagacaa----aaagttgcattgaaa 4371462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 4833657 - 4833694
Alignment:
Q  86 aaaaagacaaaattaaagttgcattgaaaattgtgtga 123  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  4833657 aaaaagacaaacttaaagttgcattgaaaattgtgtga 4833694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 32690821 - 32690882
Alignment:
Q  139 gtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||||  || |||||||||||||| |||| |||||||||| |||||||||||||||||    
T  32690821 gtaaagttgagagaaaaaaattaaagttgtatttgaaatgtaaagtgacattcattttgaaa 32690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 34171227 - 34171163
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||  |||||||||||||| ||||| ||||||||| ||||||||||||| ||||||    
T  34171227 ggtaaagttggaaa-aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 38982168 - 38982205
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtg 120  Q
    |||||||||||||| |||||||||||||||||||||||    
T  38982168 aagaaaaagacaaacttaaagttgcattgaaaattgtg 38982205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 39059872 - 39059805
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||| |||| |||||||||||||| ||||| |||||||||   ||||||||||||||||||    
T  39059872 gagggtaaagttagaag-aaaaaattaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 31889804 - 31889741
Alignment:
Q  141 aaagttggaaggaaaaaa-ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||  |||||| |||||||| ||||||||||||||| ||||||| ||||||||||||    
T  31889804 aaagttggaaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 32690753 - 32690796
Alignment:
Q  82 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||  |||||||||||||||||||||| ||||    
T  32690753 taagaaaaagacaaacctaaagttgcattgaaaattgtgcgaga 32690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 33741531 - 33741464
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||| |||| ||||||| ||||||  |||| ||||||||| |||||||||| |||||||||    
T  33741531 agggtaaagtttgaagaaaaaaatgaaagttgcattgaaaatgtaaagtgacattcatattgaaacaa 33741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 41845374 - 41845433
Alignment:
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||| ||| ||||||||||| || ||||| ||||||||| |||||||||||||||||    
T  41845374 aaagttgaaagaaaaaaattaaaattgtattgaaaatgtaaagtgacattcattttgaaa 41845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 17674402 - 17674329
Alignment:
Q  11 ggagcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa 84  Q
    |||| ||| ||||| ||||  |||||||||||||||  | |||||| |||||  ||||||||||||||||||||    
T  17674402 ggagtacatattaaaaaatgaaatgaaataatcattaaacataacatttttattaaactgcccttactttataa 17674329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 28640149 - 28640088
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||||||||| || ||||||||||||||  |||| ||||||||| ||||||| |||||    
T  28640149 gagggtaaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttatttt 28640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 32963022 - 32963066
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||    
T  32963022 ttactttataagaaaaagacaaacttaaa-ttgcattggaaattgt 32963066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 33741597 - 33741556
Alignment:
Q  81 ataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 122  Q
    |||||||||||| ||| |||||||||||||| ||||||||||    
T  33741597 ataagaaaaagataaacttaaagttgcattggaaattgtgtg 33741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 8755591 - 8755651
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaaga 92  Q
    ||||||||||||||  || ||||||||||||  |||||| ||||  |||||||||||||||    
T  8755591 aatgaaataatcatcagacataacacttttattaaactgtcctttttttataagaaaaaga 8755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 26965463 - 26965687
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26965463 cacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 26965562  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnng 211  Q
    |||||||  |||||||| ||| ||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||        |    
T  26965563 attgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatattttttg 26965662  T
Q  212 actaaagtgacactcattttgaaac 236  Q
     ||||||||||||||||||| ||||    
T  26965663 gctaaagtgacactcattttaaaac 26965687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 27483148 - 27483337
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  27483148 cacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttataagaaaaagacaaacttaaagttgcattgaaa 27483247  T
Q  115 at--tgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||  |||| |||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  27483248 attatgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 2567970 - 2568157
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2567970 agattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 2568069  T
Q  118 gtgtgagaaaaga--tggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||| || |  | |  |||||||||||||||| |||||||||||||| ||||| ||||||||| | ||||||||||| ||||||    
T  2568070 gtgtgagagaaaaattagaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 34060063 - 34059840
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| |||||||||||| |||||||||||   |||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  34060063 cacagattaagaaatggaatgaaataataattggatataaagtttttactaaactacccttactttataagaaaaagac--aattaaagttgcattgaaa 34059966  T
Q  115 attgt--gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaa-nnnnnnn 210  Q
    |||||  | |||||||| ||| ||||||||||||| ||| |||||||||||||| ||||| |||||| |||||||||||||||| |||||||            
T  34059965 attgtgcgagagaaaagttggagagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaatttttttt 34059866  T
Q  211 gactaaagtgacactcattttgaaac 236  Q
    ||||||||||||||||||||| ||||    
T  34059865 gactaaagtgacactcattttaaaac 34059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 37225553 - 37225749
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37225553 agattaagaaatacaatgaaataatcattggatataatacttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 37225652  T
Q  118 gtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||  |||||||| | |          ||||||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  37225653 gtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 19552730 - 19552538
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacactttt-accaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| ||||||||||  ||||||||||||||||||||||||  |||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  19552730 cacaaattaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaa 19552631  T
Q  114 aat--tgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||  |||| |||||||| | | ||||||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||||||||| |||||||    
T  19552630 aattctgtgagagaaaagttagagagggtaaagttggaagaaaaaatttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaaa 19552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 36771531 - 36771722
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  ||||||||||| ||| || |||| | |||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  36771531 cacatattaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattgaaa 36771630  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||  |||||||| ||| |||| |||||||| ||| |||||||||||||| ||||| ||||||||| ||||||||||||| |||||||    
T  36771631 attgtgtgagagaaaagttggagaggataaagttgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaacaaa 36771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 1340887 - 1341067
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||  ||| |||||||||||| ||| || ||||||||||| | ||| || | ||||||||||||||||||||||| ||||||||||||||||||||    
T  1340887 agattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaaacttaaagttgcattgaaaatt 1340986  T
Q  118 gtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    ||||  |||||||| ||| |||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||||||||||    
T  1340987 gtgtgagagaaaagttggagagggtaacgttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 25061891 - 25061670
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  25061891 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaa--acaaacttaaagttgcattgaaa 25061794  T
Q  115 attg--tgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnng 211  Q
    ||||  || |||||||| ||| ||| |||||||||| || |||||||||||||| ||||||||||||||| || |||||||||| |||| ||       |    
T  25061793 attgtatgagagaaaagttggagagagtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttaaaac-aatttttttg 25061695  T
Q  212 actaaagtgacactcattttgaaac 236  Q
     ||||||||||||||||||||||||    
T  25061694 gctaaagtgacactcattttgaaac 25061670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 44648365 - 44648555
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag-aaaaagacaaaattaaagttgcattgaa 113  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||| ||||||||| || ||||||||||| ||||||||| ||||||    
T  44648365 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcctttactttatgagaaaaaagacaaacttaaagttgaattgaa 44648464  T
Q  114 aattgtgtgag--aaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||  ||||| ||| ||| ||||||||||||  |||||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  44648465 aattgtgtgagaaaaaagttggagagagtaaagttggaa-aaaaaaaataaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 647547 - 647779
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||  ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  647547 cacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaa 647646  T
Q  115 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||| |||  |||||||| | |          ||||||||||||||||| |||||||||||||| ||||| |||||| |||||| | ||||||| ||||||    
T  647647 attctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgata-tcatttttaaacaa 647745  T
Q  203 annnnnnngactaaagtgacactcattttgaaac 236  Q
    |       |  |||||||||||||||||||||||    
T  647746 atttttttggttaaagtgacactcattttgaaac 647779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 790270 - 790094
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  790270 cacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaa 790171  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||||||             | |||||| |||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  790170 attgtgtgaga-------------gaaaagtttgaagaaaaaaattaaagttgtattggaaatgtaaagtgacattaattttgaaacaaa 790094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 40049067 - 40048925
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    |||||| ||| |||||||||||||||| || ||||||||||||  ||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  40049067 attaaggaatggaatgaaataatcattagacataacacttttattaaattgcctttactttataagaaaaagacaaatttaaagttgcattgaaaattat 40048968  T
Q  120 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaa 162  Q
    | |||||||| ||| |||||||||| |||||| ||||||||||    
T  40048967 gagagaaaagttggagagggtaaagctggaagaaaaaaattaa 40048925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 38457658 - 38457460
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||||||||||||||||||||||||  | ||||||||||||| |||||||| ||||||||| ||||||||| ||| ||||| |||||||||||    
T  38457658 cacaaattaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaa 38457559  T
Q  115 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaaca 201  Q
    |||||||  |||||||| |||          ||||||||||||||| | |||||||||||||| ||||| |||||| |||||| |||||||||||||||    
T  38457558 attgtgtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 46362965 - 46363165
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||||||||||||||||||| ||  ||||| |||||| |||||| ||||||||||||||||||| ||||| |||||||||||||| ||    
T  46362965 cacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaa 46363064  T
Q  115 attgtgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    |||||||  |||||||| |||          |||||||||||||||||  |||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  46363065 attgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaaca 46363164  T
Q  202 a 202  Q
    |    
T  46363165 a 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 53716196 - 53716029
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||  |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||| |||    
T  53716196 attaagaaatgaaatgaaataatcattggatataacgcttttactaaactgctcttactttataagaaaaagac--aattaaagttgcattgaaaactgt 53716099  T
Q  120 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||             | ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||| |||||    
T  53716098 gtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 83493 - 83295
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  |||||| |||||||| || | ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  83493 cacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaa 83394  T
Q  115 att--gtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||  ||| |||||||| | |          |||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  83393 attgcgtgagagaaaagttagagtatttaatgagggtaaagttggaa-gaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 2662446 - 2662557
Alignment:
Q  14 gcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||||||||||  |||  ||||||||||||||| || ||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  2662446 gcacagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaa 2662545  T
Q  114 aattgtgtgaga 125  Q
    ||||||||||||    
T  2662546 aattgtgtgaga 2662557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 31290929 - 31291111
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||| ||| || ||||||||||||| |||||||| ||| ||||| ||||||||| ||| ||||||||||| |||||    
T  31290929 cacagattaaggaatgaaatgaaataattattagacataacacttttactaaactgcctttattttattagaaaaaga-aaacttaaagttgcaatgaaa 31291027  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||  |||||||| ||  |||  |||||||| ||| |||||||||||||| |||| |||||||||| ||| |||||||||    
T  31291028 attgtgtgagagaaaagttgaagagcataaagttgaaagaaaaaaattaaagttgtattagaaatgtaaagtgatattcatttt 31291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 35239556 - 35239390
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||| ||||||||| ||||||||||| |  |||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  35239556 agattaaaaaattgaataaaataatcattaggcataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaatt 35239457  T
Q  118 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttga 197  Q
    ||||||||             | |||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||    
T  35239456 gtgtgaga-------------gaaaagttggaa-gaaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 35239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 43580677 - 43580473
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa--gaaaaagacaaaattaaagttgcattga 112  Q
    ||||||||||| ||| ||||||||||||||||  |||||||| |||||| |||||||||||  ||||||   |||||||||||| |||||||||||||||    
T  43580677 cacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatttaaagttgcattga 43580578  T
Q  113 aaattgtgtgag---aaaagatgggg---------agggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaa 198  Q
    ||||||||||||   ||||| ||| |         ||||||||||||||||  |||||||||||||| ||||| ||||||||| ||||||| ||||||||    
T  43580577 aaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttgaa 43580478  T
Q  199 acaaa 203  Q
    |||||    
T  43580477 acaaa 43580473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 44854508 - 44854409
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||  |||||||||||||||||||| || |  |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  44854508 agattaatgaattgaatgaaataatcattagaca--acacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaatt 44854411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 202
Target Start/End: Original strand, 54933194 - 54933359
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------ag 137  Q
    |||||| |||||| ||| |  |||||||||||||||||| |||||| ||||||||||||||||||||||||||||    |||| ||| |         ||    
T  54933194 ataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 54933293  T
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  54933294 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 9167661 - 9167831
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagat 131  Q
    |||||||||||||||  | |||||| |||||| |||||||||||||||||| | ||||| | ||| ||||| ||||||||||||| |||  ||||||| |    
T  9167661 aatgaaataatcatttcacataacatttttactaaactgcccttactttattaaaaaaaaa-aaacttaaaattgcattgaaaatcgtgaaagaaaagtt 9167759  T
Q  132 ggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaatgacattcattttgaaacaaa 203  Q
    |  || |||||||| ||||| |||||||||||||| ||||| |||| ||||  | |||| ||||||||||||    
T  9167760 gaagatggtaaagtaggaagaaaaaaattaaagttgtattgaaaatataaaaaagattcgttttgaaacaaa 9167831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 38165617 - 38165712
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattg 111  Q
    |||||||||| |||  |||||||||||||||  | ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  38165617 acagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 43599855 - 43600009
Alignment:
Q  85 gaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aa 181  Q
    |||||||||||| ||||||||||||| ||||||||||  |||||||| ||| ||||||||||||  ||| |||||||||||||| |||   |||||| ||    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagttggagagggtaaagttaaaagaaaaaaattaaagttgtatgaaaaatgtaaa 43599954  T
Q  182 atgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    | ||||||||||||||||||||       ||||||||| || |||||||||||||    
T  43599955 acgacattcattttgaaacaaatttgtttgactaaagtaaccctcattttgaaac 43600009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 41287255 - 41287163
Alignment:
Q  36 aaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 128  Q
    ||||||||||| || ||||||||||||| ||||||| |||| |||||| ||||||  |||| |||||||||||||||||||||||||||||||    
T  41287255 aaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgagaaaa 41287163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 42740403 - 42740238
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaag 129  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||||||||||  |||||    
T  42740403 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 42740305  T
Q  130 atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
     || ||| |||||| ||||||| ||||||||||||| |||||  |||| |||| ||||||| |||||    
T  42740304 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttatttt 42740238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 27039524 - 27039415
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaa 113  Q
    |||| |||||| ||| ||||||||  ||||||  ||||||||||||||| ||| || ||||||||||||| ||||| |||||| ||||||||||||||||    
T  27039524 cacatattaagtaatggaatgaaa--atcattaaatataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaa 27039427  T
Q  114 aattgtgtgaga 125  Q
    ||||||||||||    
T  27039426 aattgtgtgaga 27039415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 5244782 - 5244673
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||  ||| |  | |||| |||||||||||| ||||| |||||||||||||||||    
T  5244782 cacatattaagaaattgaatgaaataatcattagacataacacttttattaaagtctctttac-ttataagaaaaaaacaaacttaaagttgcattgaaa 5244684  T
Q  115 attgtgtgaga 125  Q
    ||  |||||||    
T  5244683 ataatgtgaga 5244673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 43736842 - 43736922
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    ||||||||||||||| |||||||||||||||| ||||| | |||| ||||||||||||||| ||| ||||||||||||||||    
T  43736842 aatgaaataatcattagatataacacttttactaaactactcttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 43169477 - 43169299
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    |||| | | |         | ||||||||| |||| ||||||    
T  43169477 ccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaagaaaaaaa 43169378  T
Q  159 ttaaagttatattggaaatgt-aaatgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||||| |||||||||||| |||||||||||||||||||||||        |||||||| |||||||||||| ||||    
T  43169377 ttaaagttgtattggaaatgtaaaatgacattcattttgaaacaattttttttgactaaagcgacactcattttaaaac 43169299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 2988620 - 2988763
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    |||| | | |         |||||||||||||||| ||||||    
T  2988620 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaa 2988719  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||    
T  2988720 ttaaa-ttgtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 4476334 - 4476498
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaag 129  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||| | | ||  |||||||||||||||||||||||||||  |||||    
T  4476334 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaata-ataagcttaaagttgcattgaaaattgtgtgagaaaaaag 4476431  T
Q  130 atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
     || ||| |||||| ||| ||| ||||||||||| | |||||  ||||||||| ||||||| |||||    
T  4476432 ttgaggaaggtaaaattgaaagaaaaaaattaaaatgatattaaaaatgtaaagtgacatttatttt 4476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 20512449 - 20512559
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||| ||||| |||   |  ||| || |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  20512449 cacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 20512548  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  20512549 attgtgtgaga 20512559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 54261615 - 54261505
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  54261615 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 54261516  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  54261515 attgtgtgaga 54261505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 25722450 - 25722612
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgggg---------ag 137  Q
    |||||| |||||| ||| |  |||||||||| ||||| |||||||| ||||||||||||||||||||||||    |||||||| ||| |         ||    
T  25722450 ataacaattttactaaaataaccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttag 25722549  T
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||  |||| |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  25722550 ggtaaagtatgaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 25722612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 51381867 - 51381814
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  51381867 ccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgaga 51381814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 22414948 - 22414757
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||||||  ||||||||||| ||| || |||| |||||||  ||||| ||  || |||||||||||| || ||| ||||||||||||||||||||    
T  22414948 agattaagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataagaaaa-gagaaacttaaagttgcattgaaaatt 22414850  T
Q  118 gtgtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||| ||| ||| | |          || ||||||||||||||  |||||||||||||||||||  ||||||||| |||||||||||||||||    
T  22414849 gtgtaagagaaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 27027933 - 27027732
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa----gacaaaattaaagttgcatt 110  Q
    |||| |||||| ||| ||||||||  ||||||  | ||||||||||||  ||| || ||||||||||||| |||||    |||||| |||||||||||||    
T  27027933 cacatattaagtaatggaatgaaa--atcattaaacataacacttttaataaagtgtccttactttataaaaaaaaaaaagacaaatttaaagttgcatt 27027836  T
Q  111 gaaaattgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaa 198  Q
    |||||||||||  |||||||| ||| |         ||| ||||||| |||| ||||||||||| || ||||||||||||||| ||||||| ||||||||    
T  27027835 gaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattggaaatgtaaattgacattaattttgaa 27027736  T
Q  199 acaa 202  Q
    ||||    
T  27027735 acaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 13485909 - 13485993
Alignment:
Q  153 aaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||    
T  13485909 aaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaaattgtttttgctaaagtgacactcattttgaaac 13485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 43687872 - 43687946
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  43687872 ataacaattttactaaaataaccttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgaga 43687946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 45095723 - 45095559
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacac-ttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||| ||| ||||||||||||||||  | ||||||| |||||| ||| ||||| |||||||||||||||| |||||| |||||| ||               
T  45095723 attaaggaatggaatgaaataatcattaaacataacacattttactaaaatgccccttactttataagaaaaggacaaacttaaaggtg----------- 45095635  T
Q  118 gtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
     || |||||||| ||| ||||||||||||||||  |||||||||||||| ||||| ||||||||| |||||||||||||    
T  45095634 -tgagagaaaagttggagagggtaaagttggaa--aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 52222831 - 52222892
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaatgacattcattttga 197  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  52222831 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatg-aaacgacattcattttga 52222892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 4392088 - 4391992
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||  ||||||||||| ||| || ||||||||||||| |||||||||         |||||||||||||| ||||||||||||||||||||||    
T  4392088 attaagaaatgaaatgaaataattattagacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgt 4391998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 22730989 - 22730924
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  22730989 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 32303991 - 32304060
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||  |||||||    
T  32303991 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaacaaa 32304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 53560807 - 53560754
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  53560807 ccttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgaga 53560754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 22731126 - 22731035
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcatt 110  Q
    ||||||||||||  |||||||||||||||  | |||||| |||||| |||||| ||| | ||||||||||||||||||| |||||||| ||||    
T  22731126 agattaagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagttacatt 22731035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 44645481 - 44645340
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||| |||    |||||||| ||| |         |||||||||||||||| ||||||    
T  44645481 ccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 44645382  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||  || |||||||||||  ||||||||||||||||    
T  44645381 ttaaagttgcatgggaaatgtaaagcgacattcattttgaaa 44645340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 3000883 - 3000841
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  3000883 aagaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 3000841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 35099453 - 35099518
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaac 200  Q
    ||||||||||||| || |||||||||||||| |||||||||||| |||||||||| ||| ||||||    
T  35099453 agggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaaatgacatttattatgaaac 35099518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 36310339 - 36310404
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||||||| || |||||| ||||||| |||||||||||| |||||||||| ||||||||||||    
T  36310339 ggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacatttattttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 43600152 - 43600257
Alignment:
Q  22 taagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaa-gacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||  ||| ||||||| ||| ||||||||| |||||| ||||| ||||| ||||||||| ||||| |||||| ||||||||  |||| |||||||    
T  43600152 taagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaattgt 43600251  T
Q  120 gtgaga 125  Q
    ||||||    
T  43600252 gtgaga 43600257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 54261482 - 54261414
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||  ||| |||||||||||||||    
T  54261482 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttgaaacaa 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 42007072 - 42007119
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  42007072 ccttattttataagaacaagacaaacttaaagttgcattgaaaattgt 42007119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 16240706 - 16240664
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  16240706 aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 16240664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 36541558 - 36541455
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttg-aaacaaannnnnnngactaaagtgacactcattttg 232  Q
    ||||||||||||||||| || ||| ||||||| ||||| |||||| ||| ||||||||||||| |||||||        ||||||| |||||||||||||    
T  36541558 gagggtaaagttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcattttgaaaacaaatttctttaactaaagcgacactcattttg 36541459  T
Q  233 aaac 236  Q
    ||||    
T  36541458 aaac 36541455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 32303915 - 32303964
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 121  Q
    |||||||||||||||||||| |||| |||||| || ||||||||||||||    
T  32303915 ccttactttataagaaaaaggcaaacttaaagctgtattgaaaattgtgt 32303964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 36541634 - 36541581
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||| ||||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  36541634 ccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgaga 36541581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 43687969 - 43688040
Alignment:
Q  135 gagggtaaagttggaaggaaaa---aattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||||||| |||||| |||||    
T  43687969 gagggtaaagttggaagaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttggaacaa 43688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 51381789 - 51381720
Alignment:
Q  135 gagggtaaagttggaaggaaaaaa-ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||| |||| |||||| |||||||| ||||| ||||||||| ||||||| ||||||||||||    
T  51381789 gagggtaaagttagaagaaaaaaaattaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 43599520 - 43599571
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttata 83  Q
    ||||||||||||||| || |||| |||||||| |||||||||||| ||||||    
T  43599520 aatgaaataatcattagacataatacttttactaaactgcccttattttata 43599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 49470851 - 49470788
Alignment:
Q  140 taaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||| ||||| | |||||||||||||| ||||| |||||| ||| |||||||||||||||||||    
T  49470851 taaatttggatgaaaaaaattaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 20512585 - 20512651
Alignment:
Q  138 ggtaaagttggaaggaaaaaa-ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| |||||| ||||||||  |||| |||||||||  |||||||||||||||||||    
T  20512585 ggtaaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 52202383 - 52202445
Alignment:
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatg-taaatgacattcattttgaaacaa 202  Q
    ||||||||||| |||||||||||||| ||||| |||||  ||| |||||||||||| ||||||    
T  52202383 aaagttggaagaaaaaaattaaagttgtattgaaaatgcaaaacgacattcattttaaaacaa 52202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 5244652 - 5244584
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaa-atgacattcattttgaaacaaa 203  Q
    |||||||||||||||   |||||||||||||||||||  ||||||||  ||||||||||||| |||||||    
T  5244652 gagggtaaagttggata-aaaaaattaaagttatattaaaaatgtaaggtgacattcattttaaaacaaa 5244584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 120
Target Start/End: Original strand, 35099389 - 35099426
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtg 120  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  35099389 aagaaaaagacaaacttaaaattgcattgaaaattgtg 35099426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 43600277 - 43600341
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||||||||||| |||||||||||| || ||||| ||||||||| | ||||| |||||||||    
T  43600277 gagggtaaagttggaa-gaaaaaattaaaattgtattgaaaatgtaaagtaacatttattttgaaa 43600341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 41287145 - 41287082
Alignment:
Q  135 gagggtaaagttggaaggaaaaaa--ttaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    ||||| ||||||||||| ||||||  |||||||| ||||||||||||||| |||||| ||||||    
T  41287145 gagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccatttt 41287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 42857046 - 42857102
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgc 71  Q
    ||||||||||| |||  ||||||||||||||| || |||||| |||||| |||||||    
T  42857046 cacagattaaggaatcaaatgaaataatcattagacataacatttttactaaactgc 42857102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 42857148 - 42857212
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||||| |||| |||||||||| ||| ||| ||||||||||| |||||||| |||| |||||    
T  42857148 ggtaaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaaca 42857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 50420321 - 50420258
Alignment:
Q  139 gtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||||||||| |||||||||||||| ||||  |||||| |||||||||| ||||| ||||||    
T  50420321 gtaaagttggaag-aaaaaattaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 53560726 - 53560663
Alignment:
Q  140 taaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaa 203  Q
    |||||||||||| ||||||||||||||  |||| |||||| ||| |||||| |||||||||||||    
T  53560726 taaagttggaag-aaaaaattaaagttgcattgtaaatgtaaaacgacatttattttgaaacaaa 53560663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 52732782 - 52732560
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52732782 agattaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 52732683  T
Q  118 gtgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngac 213  Q
    ||||  |||||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||| ||||||         ||    
T  52732682 gtgtgagagaaaagttggggagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaattttttttaac 52732583  T
Q  214 taaagtgacactcattttgaaac 236  Q
    |||||||||||||||||||||||    
T  52732582 taaagtgacactcattttgaaac 52732560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 43421082 - 43421273
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||     
T  43421082 cacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgctcttactttataagaaaaagacaaaattaaagttgcattgaat 43421181  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||  |||||||  ||| ||||||||||||||||| |||||||||||||| ||| ||||||||||| |||| ||||||||||||||||    
T  43421182 attgtgtgagagaaaacctggagagggtaaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcattttgaaacaaa 43421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 34360197 - 34360033
Alignment:
Q  17 cagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 116  Q
    ||||||||| |||  ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34360197 cagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat 34360098  T
Q  117 tgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt 179  Q
    |||||  |||||||| ||| ||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  34360097 tgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaaataaagttgtattgaaaatgt 34360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 51930765 - 51930561
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    |||| ||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51930765 attatgaaatggaatgaaataataattggatataacgcttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgt 51930666  T
Q  120 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaag 218  Q
    ||||||             | ||||||||||| ||||||||||| || |||||||||||||||  ||||||||||||||||||||        |||||||    
T  51930665 gtgaga-------------gaaaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcattttgaaacaaatttttttaactaaag 51930579  T
Q  219 tgacactcattttgaaac 236  Q
    ||||||||||||||||||    
T  51930578 tgacactcattttgaaac 51930561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 15501129 - 15501302
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaag 129  Q
    ||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||  ||||||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaag 15501228  T
Q  130 atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
     ||  ||| |||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  15501229 ttgaagagagtaatgttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 54512217 - 54512034
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  ||||||||||| ||||||||||||  |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||     
T  54512217 cacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactgctcttactttataagaaaatgacaaaattaaagttgcattgaac 54512118  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||  |||||||| ||| |||| ||||||||||||  ||||||||||||||||||  ||||||||| ||| |||||||||    
T  54512117 attgtgtgagagaaaagttggagaggataaagttggaagataaaaattaaagttatattaaaaatgtaaagtgatattcatttt 54512034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 21045327 - 21045150
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| ||| ||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21045327 cacagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 21045228  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||||||             | |||||||||||  |||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  21045227 attgtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaa 21045150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 44855438 - 44855328
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44855438 cacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaa 44855339  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  44855338 attgtgtgaga 44855328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 32140944 - 32141119
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||||  ||||||||||  |||| |||||||||||    
T  32140944 cacagattaagaaattgaatgaaataatcattagacataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaa 32141043  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||             | ||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  32141044 attgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 22 - 236
Target Start/End: Complemental strand, 50072438 - 50072242
Alignment:
Q  22 taagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 121  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  50072438 taagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttat------aagacaaaattaaagttgcattgaaaattgtgt 50072345  T
Q  122 gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtg 220  Q
    ||||||             ||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||        | ||||||||    
T  50072344 gagaaa-------------aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtg 50072258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 36805408 - 36805600
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||| ||||| |||||| |||||||||||| ||||||||| |||||||    
T  36805408 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagtttatatgaaaaagacaaacttaaagttgtattgaaa 36805507  T
Q  115 attgtgtgag--aaaagatg--gggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||||||  ||||| ||  | |||| |||||||||||| |||||||||||||| ||||| |||||| |||| |||| |||||| ||||||    
T  36805508 attgtgtgagaaaaaagttggagtgaggttaaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacattttaaaacaa 36805600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 31817157 - 31817365
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag-aaaaagacaaaattaaagttgcattgaa 113  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  31817157 cacaaattaagaaatggaatgaaataatcattggatataacgtttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaa 31817256  T
Q  114 aattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnnga 212  Q
    ||||||||||||             | ||||||||||| ||||||  ||||||  |||||||||||||| |||||||||||||||||||||       |     
T  31817257 aattgtgtgaga-------------gaaaagttggaagaaaaaaa--aaagttgcattggaaatgtaaagtgacattcattttgaaacaaatttttttgg 31817341  T
Q  213 ctaaagtgacactcattttgaaac 236  Q
    |||| |||||||||||||||||||    
T  31817342 ctaatgtgacactcattttgaaac 31817365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 19849273 - 19849079
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||  ||| ||||||| |||  |||||||| |||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  19849273 attaagaaatgaaataaaataattattacatataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgt 19849174  T
Q  120 gt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||  |||||||| |||          ||||||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| ||||||    
T  19849173 gtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 37445837 - 37445655
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg--agaaaag 129  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||  ||||||     
T  37445837 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaagaaaaa 37445738  T
Q  130 atgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
     | |          ||||||||||||||||| |||||||||||||| ||||  |||||| |||||||||||||||| ||||||    
T  37445737 tttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 56422957 - 56423056
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||| |||||||| |||||||||||    
T  56422957 cacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactgtctttactttataagaaaaagacgaaattaaaattgcattgaaa 56423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 39671068 - 39671238
Alignment:
Q  19 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    ||||||||||| ||||||||| |||||| || ||||||| ||||| ||||| || ||||||||||||||||| ||||| |||||||||||||||||||||    
T  39671068 gattaagaaatggaatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattg 39671167  T
Q  119 tgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||             | |||||| ||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  39671168 tgtgaga-------------gaaaagtt-gaaagaaaaaattaaagttgtattggaaatgtaaaacgacattcattttgaaacaa 39671238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 34096210 - 34096100
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||| ||||  ||||||||||||||| ||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  34096210 cacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgcccttactttataagaaaaagacaaacttaaagtttcattgaaa 34096111  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  34096110 attgtgtgaga 34096100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 22212535 - 22212336
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| |||||||| ||  ||||||  |||||  |||| ||||||||| |||||||    
T  22212535 cacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactgcctttgttttatataaaaaactcaaacttaaagttgtattgaaa 22212436  T
Q  115 attgtgtgagaaaa--gatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaa-atgacattcattttgaaacaa 202  Q
    ||||||||||||||  | |||          ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  22212435 attgtgtgagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 45520419 - 45520526
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||| |||| ||||||||||| || ||||||||||||| || |||||||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  45520419 agattaagaaatggaataaaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaatt 45520518  T
Q  118 gtgtgaga 125  Q
    || |||||    
T  45520519 gtatgaga 45520526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 202
Target Start/End: Complemental strand, 24259771 - 24259606
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------ag 137  Q
    |||||| |||||| ||| |  |||||||||||||||||| |||||| ||||||||||||||||||||||||||||    |||| ||| |         ||    
T  24259771 ataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 24259672  T
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  24259671 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 30022258 - 30022062
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||| |||  ||| |||||||||||  ||||||||||||||| ||||| || ||  | ||||||||||||||||| | ||||||||||||||||||    
T  30022258 agattaaggaatgaaataaaataatcattatatataacacttttactaaactacc-ttcttgtataagaaaaagacaaactcaaagttgcattgaaaatt 30022160  T
Q  118 gtgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaa 203  Q
    ||||  |||||||| ||           ||||||||||||||||| |||||||||||||| |||||||||||| || | |||||||||||||||||||    
T  30022159 gtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtcaagtaacattcattttgaaacaaa 30022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 42672583 - 42672477
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||||| | | |||||||||||||||||||||| ||||||||| |||||||    
T  42672583 cacaaattaaggaatataatgaaataatcattagacataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaa 42672484  T
Q  115 attgtgt 121  Q
    |||||||    
T  42672483 attgtgt 42672477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 35928650 - 35928449
Alignment:
Q  48 gatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg---------agg 138  Q
    |||||| ||||||||| ||| |||| | ||||||||||||||||| ||| ||||| |||||||||||||||||  ||||| | ||  |         |||    
T  35928650 gatatatcacttttactaaattgccatgactttataagaaaaagataaacttaaaattgcattgaaaattgtgaaagaaacgttgcagtatttattgagg 35928551  T
Q  139 gtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaaca 237  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||| ||| ||| ||||||||||||        || |||||||||||||||| |||||||    
T  35928550 gtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatatttattttgaaacaattttttttgattaaagtgacactcattgtgaaaca 35928451  T
Q  238 ga 239  Q
    ||    
T  35928450 ga 35928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 56556237 - 56556410
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||||||||||||   |||| || ||||||||||||| ||| |  |||| |||||||||||||| ||||| ||||  || ||||||||    
T  56556237 cacagattaaggaattgaatgaaat---cattagacataacacttttactaaattatccttgctttataagaaaaatacaaacttaacattacattgaaa 56556333  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||             | |||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  56556334 attgtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 45889702 - 45889559
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaa 158  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    |||||||| |||          ||||||||||| ||||| |||||     
T  45889702 ccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaag 45889603  T
Q  159 ttaaagttatattggaaatgtaaatgacattcattttgaaacaa 202  Q
    |||||||| ||||| ||||||||  |||||||||||||||||||    
T  45889602 ttaaagttgtattgaaaatgtaagcgacattcattttgaaacaa 45889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 6462073 - 6462004
Alignment:
Q  134 ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  6462073 ggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 54233954 - 54233902
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54233954 cttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 54233902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 3093539 - 3093433
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||||||||||| ||||||||||| || |||||||||| |  ||| || |||| |||||||||||||| | ||| |||||||||||| | |||||    
T  3093539 agattaagaaattgaataaaataatcattagacataacactttcattaaattgtccttcctttataagaaaaa-agaaatttaaagttgcatcggaaatt 3093441  T
Q  118 gtgtgaga 125  Q
    ||||||||    
T  3093440 gtgtgaga 3093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 11835295 - 11835105
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||||||  ||||||||||| ||| |  ||||||||||||  ||||| ||  || |||||||||||| || ||| ||||||||||||||||||||    
T  11835295 agattaagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagtttataagaaaa-gataaacttaaagttgcattgaaaatt 11835197  T
Q  118 gtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||| ||| | |          || |||||| ||| ||| |||||||||||||||||||  ||||||||| |||||||||||||||||    
T  11835196 gtgtgagagaaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 11835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 31941697 - 31941553
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaa----agatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||||| |    || ||| |         |||||||||||||||| ||||||    
T  31941697 ccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaa 31941598  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||| ||||| ||||||||| ||||||||||||| ||||||    
T  31941597 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 34124491 - 34124381
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  34124491 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 34124392  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  34124391 attgtgtgaga 34124381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 47321341 - 47321138
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||||||| ||||| |||   |  ||| || |||||| ||| |  ||||||||||||||||||||||||  |||||||||||||||||    
T  47321341 cacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaccttaaagttgcattgaaa 47321242  T
Q  115 attgt----gtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||    |||||||||| | |          |||||||||||||||||  |||||||||||||| ||||| ||||||||| ||||||||||||| |||    
T  47321241 attgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 47321142  T
Q  200 caaa 203  Q
    ||||    
T  47321141 caaa 47321138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 17499732 - 17499874
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgt----gtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaatt 160  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    | |||||||| | |          ||||||||||||||||| ||||||||    
T  17499732 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 17499831  T
Q  161 aaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||| ||  ||||||||||||||  |||||||||||||||||||    
T  17499832 aaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 28116384 - 28116243
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| |||||||| || ||||||||||||    |||||||| | | |         |||||||||||||||| ||||||    
T  28116384 ccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaagaaaaaaa 28116285  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||| ||||||||||||||| ||||||| |||||||||    
T  28116284 ttaaagttgtattggaaatgtaaagtgacatttattttgaaa 28116243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 45903377 - 45903441
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttat 82  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  45903377 agattaagaaatagaatgaaataatcattggatataacgcttttattaaactgctcttactttat 45903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 4408169 - 4408243
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| |||||| ||| |  ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4408169 ataacaattttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 4408243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19282501 - 19282567
Alignment:
Q  138 ggtaaagttggaaggaaaa-aattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19282501 ggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 29840139 - 29840036
Alignment:
Q  135 gagggtaaagttggaaggaaaaaa-ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttg 232  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||||| ||||||||||||||||||||        | ||||||||||| ||||||||    
T  29840139 gagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacagtcattttg 29840040  T
Q  233 aaac 236  Q
    ||||    
T  29840039 aaac 29840036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 38761788 - 38761898
Alignment:
Q  19 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    ||||||||||| |||| ||||||| | | || ||||||||||||| |||   |||||||||||| ||| ||||||| | |||||||| | ||||||||||    
T  38761788 gattaagaaatagaattaaataattaatagacataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaattg 38761887  T
Q  119 tgtgagaaaag 129  Q
    || ||||||||    
T  38761888 tgagagaaaag 38761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 29289852 - 29289959
Alignment:
Q  21 ttaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaa---agacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||| |||||||||||||||| || |||| | |||||  |||  ||| ||||||||||| ||||   ||||||| ||||| ||||||||||||||    
T  29289852 ttaagaaatggaatgaaataatcattagacataatatttttaataaatcgcctttactttataaaaaaaaaaagacaaacttaaaattgcattgaaaatt 29289951  T
Q  118 gtgtgaga 125  Q
    ||||||||    
T  29289952 gtgtgaga 29289959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 31987430 - 31987306
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatatt 171  Q
    |||||||||||||| |||||||||||||||||||  || | |||||||| |||          ||||||||||||||||| |||||||||||||| ||||    
T  31987430 aagaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtatt 31987331  T
Q  172 ggaaatgtaaa-tgacattcatttt 195  Q
     |||||||||| |||||||||||||    
T  31987330 agaaatgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 51434270 - 51434323
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||||||    
T  51434270 ccttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgaga 51434323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 38692516 - 38692474
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  38692516 aagaaaaagacaaaattaaagttgcattgaaaattgtgcgaga 38692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 51737280 - 51737367
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagt 104  Q
    |||| |||||| ||| |||||||||||| ||| || ||||||||||||| ||| | ||||||||||||  |||||||||||| |||||||    
T  51737280 cacaaattaaggaatagaatgaaataataattagacataacacttttactaaattacccttactttat--gaaaaagacaaacttaaagt 51737367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 34124358 - 34124289
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||  |||||||||||| |||||||    
T  34124358 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaacaaa 34124289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 30492914 - 30492732
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| ||| |||||||||||||||| || |||||||||||||  ||||||||         |||||||||||||| ||||||||||||| |||    
T  30492914 cacaaattaaggaatggaatgaaataatcattagacataacacttttactgaactgccc---------aagaaaaagacaaacttaaagttgcattaaaa 30492824  T
Q  115 a-ttgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatt 193  Q
    | |||||   |||||||| ||| |         ||||||||||||| || |||||||||||||| ||||| ||||||||| |||||||||||    
T  30492823 aattgtgcaagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 51434346 - 51434414
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||| |||||||||||||||||||  ||| ||||||||||  |||||||||||| ||||||    
T  51434346 gagggtaaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 6462153 - 6462102
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga 123  Q
    |||||||||||||||| || ||||| |||||||||||||||| |||||||||    
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtga 6462102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 6510253 - 6510078
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaa 162  Q
    ||||||||||| ||||||||||| ||||| || |||| ||||||||||  |||||||| ||| |         ||||||||||||  || ||||| ||||    
T  6510253 ttactttataataaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtggagtatttattgagggtaaagttgagagaaaaaagttaa 6510154  T
Q  163 agttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaaca 237  Q
    |||| ||||| |||| |||| ||||||| |||||||||||||       ||||||||||||| ||||||| |||||    
T  6510153 agttgtattgaaaatataaagtgacatttattttgaaacaaattattttgactaaagtgacattcattttaaaaca 6510078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 17317805 - 17317910
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||| ||||  ||| ||||||||||| || ||  | ||||||| ||||| | ||||||||||||||||| |||||| ||     ||||||||||    
T  17317805 cacagattaaaaaataaaataaaataatcattagacattgctcttttactaaactacgcttactttataagaaaaggacaaattt-----tgcattgaaa 17317899  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  17317900 attgtgtgaga 17317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 34534111 - 34534157
Alignment:
Q  78 tttataagaaaaagacaaaattaaa-gttgcattgaaaattgtgtga 123  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  34534111 tttataagaaaaagacaaacttaaaagttgcattgaaaattgtgtga 34534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 45903501 - 45903559
Alignment:
Q  142 aagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||| || |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  45903501 aagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 45903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 55126636 - 55126587
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 121  Q
    |||||||||||||||| |||||||| |||||||||||  |||||||||||    
T  55126636 ccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgt 55126587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 45520548 - 45520607
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    ||| |||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||    
T  45520548 aggataaagttggaag-aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 6232141 - 6232192
Alignment:
Q  153 aaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||||||||| ||||| ||||||||| ||||||| |||||||||||||    
T  6232141 aaaaaattaaagttgtattgaaaatgtaaattgacatttattttgaaacaaa 6232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 38692471 - 38692408
Alignment:
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||| || ||||||||||||||  |||| ||||||||| ||||||||||||| |||||||    
T  38692471 aaagttgggagaaaaaaattaaagtttaattgaaaatgtaaagtgacattcattttaaaacaaa 38692408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 17317950 - 17317999
Alignment:
Q  153 aaaaaattaaagttatattggaaatgtaa-atgacattcattttgaaaca 201  Q
    |||||||||||||| ||||||||||||||  ||||||||| |||||||||    
T  17317950 aaaaaattaaagttgtattggaaatgtaatgtgacattcagtttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 29840249 - 29840201
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttac 63  Q
    |||| |||||| ||| |||||||||||||||| || |||||||||||||    
T  29840249 cacaaattaaggaatggaatgaaataatcattagacataacacttttac 29840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 44835398 - 44835350
Alignment:
Q  135 gagggtaaagtt-ggaaggaaaaaattaaagttatattggaaatgtaaa 182  Q
    |||||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  44835398 gagggtaaagtttggaagaaaaaaattaaagttgtattcgaaatgtaaa 44835350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 54092021 - 54091953
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||  || |||||||||||||| ||||  |||| |||| ||||||||||||| ||||||    
T  54092021 gagggtaaagttgagagaaaaaaattaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 55548234 - 55548286
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||  || ||||||||| |||||||||||||| |||||||| ||||    
T  55548234 cttactttatttgacaaagacaaacttaaagttgcattggaaattgtgagaga 55548286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 40410640 - 40410473
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40410640 cacagattaagaaatggaatgacataatcattggatataacgcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 40410541  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgta 180  Q
    |||||||  |||||||| ||| |||||||||||||| || |||||||||||||| |||||||||||||    
T  40410540 attgtgtcagagaaaagttggagagggtaaagttgggagaaaaaaattaaagttgtattggaaatgta 40410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 29795156 - 29795383
Alignment:
Q  17 cagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 116  Q
    ||||||||  ||| |||||||||||||||| || |||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  29795156 cagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaactttaaagttgcattgaaaat 29795255  T
Q  117 tgtgtg--agaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngac 213  Q
    ||||||  ||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||       | |    
T  29795256 tgtgtgaaagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatatttttggc 29795355  T
Q  214 taaagtgacactcattttgaaacagatg 241  Q
    |||||||||| ||||||| |||| ||||    
T  29795356 taaagtgacattcattttaaaacggatg 29795383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 40987237 - 40987418
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||| ||| |||||||||||||||||    
T  40987237 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattgtccttactttataagaaaaagataaatttaaagttgcattgaaa 40987336  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||| |||||||| ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||  ||||||||||||    
T  40987337 attgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcatttt 40987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 1381916 - 1381748
Alignment:
Q  35 gaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggg 134  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||| |||     
T  1381916 gaaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgtgagagaaaagttgga 1381817  T
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    || |||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||| ||||||    
T  1381816 gaaggtaaagttggaagaaaaaaatcaaagttatattggaaatgtaaagtaacattcattttaaaacaa 1381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 4840682 - 4840881
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4840682 cacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 4840781  T
Q  115 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    | |||||  |||||||| | |          ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  4840782 actgtgtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttggaacaa 4840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 7743598 - 7743401
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||  |||| ||||||||||||||  |||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  7743598 cacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgcccttactttataagaaaaagacaaatttaaagttgcattgaaa 7743499  T
Q  115 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaac 200  Q
    |||||||  |||||||| |||          ||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||| ||||    
T  7743498 attgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 4766184 - 4766380
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagat 131  Q
    ||||||||||||||||||||||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  4766184 aatgaaataatcattggatataacgttattactaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga------ 4766277  T
Q  132 ggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattt 230  Q
           | ||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||| |       | ||||||||||||||||||    
T  4766278 -------gaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaacagatttttttg-ctaaagtgacactcattt 4766369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 1298738 - 1298845
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||||||  |||||||||||||||| |||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1298738 agattaagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1298837  T
Q  118 gtgtgaga 125  Q
     |||||||    
T  1298838 atgtgaga 1298845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 36360347 - 36360522
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaag-- 129  Q
    ||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||      
T  36360347 aatgaaataatcattagacataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgtgagaaaagtt 36360446  T
Q  130 -------atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttga 197  Q
           ||   ||||||||||||| ||| |||||||||||||| ||||| ||||| ||| ||| |||||||||||    
T  36360447 tgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcattttga 36360522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 236
Target Start/End: Complemental strand, 4536742 - 4536538
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaa---a 128  Q
    ||||||||||||||| || ||| ||||||||| |||||||||         |||||||||||||| ||||||||||||||||||||||||||||||   |    
T  4536742 aatgaaataatcattagacatatcacttttactaaactgccc---------aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaagtta 4536652  T
Q  129 ga-----tggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgac 222  Q
    ||     ||  |||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||        | ||||||||||    
T  4536651 gagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgac 4536552  T
Q  223 actcattttgaaac 236  Q
    ||||||||||||||    
T  4536551 actcattttgaaac 4536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 34225944 - 34225771
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||| |||  ||||||||||||||| || |||| | |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34225944 agattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 34225845  T
Q  118 gtgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||             | |||||||||||  |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  34225844 gtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 43460961 - 43460860
Alignment:
Q  21 ttaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtg 120  Q
    ||||||||| |||||||||||||||||||||   ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||    
T  43460961 ttaagaaatggaatgaaataatcattggata---cacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatg 43460865  T
Q  121 tgaga 125  Q
    |||||    
T  43460864 tgaga 43460860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 14378219 - 14378305
Alignment:
Q  31 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14378219 gaatgaaataatcatttaatataacacttttactaaactgcccttactttataagaaaaagataaatttaaagttgcattgaaaatt 14378305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 24775386 - 24775276
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||||||||  |||||||    
T  24775386 cacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaa 24775287  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  24775286 attgtgtgaga 24775276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 37107061 - 37106949
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag--aaaaagacaaaattaaagttgcattga 112  Q
    |||| |||||||||| |||||||||||| ||| || | ||||||||||| ||| |||||||||||||||||  ||||||| ||| |||||||||||||||    
T  37107061 cacacattaagaaatggaatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattga 37106962  T
Q  113 aaattgtgtgaga 125  Q
    |||||||||||||    
T  37106961 aaattgtgtgaga 37106949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 16316863 - 16316796
Alignment:
Q  58 ttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16316863 ttttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 16316796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 43388612 - 43388845
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  43388612 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 43388711  T
Q  115 attgtgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||| ||||||| || |   || |        ||||||||||||||||| ||||||||||||||  |||| |||||||||  |||||||||||||||||||    
T  43388712 attatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 43388811  T
Q  203 annnnnnngactaaagtgacactcattttgaaac 236  Q
    |       | ||||| ||||||||||||||||||    
T  43388812 atttttttggctaaaatgacactcattttgaaac 43388845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 42970069 - 42969904
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaag 129  Q
    ||||||||||| ||| ||  |||||||||||| || |||| |||| ||||||| |||| || ||  |||||||||||||||||||||||||||  |||||    
T  42970069 aatgaaataattattagacgtaacacttttactaa-ctgctcttattttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgagaaaaaag 42969971  T
Q  130 atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
     |||||| |||||| || |||| |||||||||||||  ||||  ||||||||| ||||||| |||||    
T  42969970 ttggggaaggtaaaattagaagaaaaaaattaaagtggtattaaaaatgtaaagtgacatttatttt 42969904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 33093434 - 33093365
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  33093434 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaa 33093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 18374850 - 18374918
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  18374850 gagggtaaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 14698187 - 14698010
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||| || || |||   |  ||| || |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  14698187 cacagattaagaaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 14698088  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||           ||| | ||||||||||| ||||||||||||||  |||| |||||||||  |||||||||||||||||||    
T  14698087 attgtgtga-----------gagagaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 43344195 - 43344288
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||| || |||||| |||||  ||||  |||||||||||||||||||||| ||  ||||||||| |||||||||| |||||||    
T  43344195 aatgaaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgaga 43344288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 775875 - 775946
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 122  Q
    |||||| |||||| ||| |  ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  775875 ataacaattttactaaaataaccttaatttataagaaaaagacaaacttaaagttgcattgaaaattgtgtg 775946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 2459915 - 2459771
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    ||||| |||||||||| | |||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||||    
T  2459915 ccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 2459816  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||  ||||||||||||||  |||||||||||| ||||||    
T  2459815 ttaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 4566112 - 4566186
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| |||||| ||| |  ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  4566112 ataacaattttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgaga 4566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 11171941 - 11171839
Alignment:
Q  14 gcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    ||||| ||||||||||||||| ||||||||| | || ||||||||||||| ||| |  ||| |||||||  |||||||||||| |||||||| ||||| |    
T  11171941 gcacaaattaagaaattgaataaaataatcaatagacataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattgga 11171842  T
Q  114 aat 116  Q
    |||    
T  11171841 aat 11171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 1360306 - 1360175
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttatatt 171  Q
    |||||||||||||| |||||||||||||||||||||| |  |||||||| ||           ||||||||| |||| || |||||||||||||| ||||    
T  1360306 aagaaaaagacaaacttaaagttgcattgaaaattgtttaagagaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtatt 1360207  T
Q  172 ggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||| ||| ||||||||||||||||||||    
T  1360206 ggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 10580944 - 10581012
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| |||||||||||||| ||||| |||| |||| ||| ||||||||||||||||    
T  10580944 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 41984561 - 41984416
Alignment:
Q  72 ccttactttataagaaaaagacaaaa-ttaaagttgcattgaaaattgtgt----gagaaaagatgggg---------agggtaaagttggaaggaaaaa 157  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||    |||||||| ||| |         | |||||||||||||| |||||    
T  41984561 ccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaa 41984462  T
Q  158 attaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||| ||||| |||||||||  || ||| ||||||||||||    
T  41984461 attaaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 25332712 - 25332659
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  25332712 ccttactttataagaaaaagacaaacttagagttgtattgaaaattgtatgaga 25332659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 39866683 - 39866736
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||||||||||||||    
T  39866683 ccttactttacaagaaaatgacaaacttaaagttgtattgaaaattgtgtgaga 39866736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 10580869 - 10580921
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  10580869 cttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgaga 10580921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44228659 - 44228609
Alignment:
Q  19 gattaagaaattgaatgaaataatcattggatataacacttttaccaaact 69  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||    
T  44228659 gattaaaaaatggaatgaaataatcattagatataacacttttactaaact 44228609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 16316771 - 16316710
Alignment:
Q  139 gtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||| ||||||| |||||||||||||| |||||||||| |||| ||||||||| |||||||    
T  16316771 gtaaatttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcaatttgaaa 16316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 775972 - 776039
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||| |||| ||||||||||||||  |||| |||||||||  |||||||||||||||||||    
T  775972 gagggtaaagttagaag-aaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 33093510 - 33093458
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag 124  Q
    ||||||||||||| |  |||| ||| |||||||||||||||||||||||||||    
T  33093510 ccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgag 33093458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 14378316 - 14378371
Alignment:
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||| || |||||||||||||| ||||| ||||||||| |||||||||||||    
T  14378316 aaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 45148055 - 45148106
Alignment:
Q  152 gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||    
T  45148055 gaaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 1298885 - 1298931
Alignment:
Q  154 aaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||    
T  1298885 aaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 6592013 - 6591963
Alignment:
Q  153 aaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||||||||| |||||||||||| |||||| ||||||||| ||||||    
T  6592013 aaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 39866762 - 39866820
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||||||||| ||||||||||| ||  ||||||||||||||  ||||||||||||    
T  39866762 ggtaaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcatttt 39866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 43344312 - 43344375
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||  ||||||||||||| ||||| |||| |||  ||||||||||||||||||||    
T  43344312 ggtaaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 14511589 - 14511552
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtg 120  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  14511589 aagaaaaagacaaatttaaagttacattgaaaattgtg 14511552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 24775255 - 24775186
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||||| |||| || ||||||||||| || ||||| ||||||||| ||||| ||||||| |||||||    
T  24775255 gagggtaaacttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaaa 24775186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 37106927 - 37106886
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaat 177  Q
    |||||||||||||||| |||||||||||||| ||||| ||||    
T  37106927 agggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 25332631 - 25332568
Alignment:
Q  140 taaagttggaaggaaaaaattaaagttatattggaaatgtaa-atgacattcattttgaaacaaa 203  Q
    |||||||||||| ||||||||||||||  |||||||||||||   ||| ||||||||||||||||    
T  25332631 taaagttggaag-aaaaaattaaagttgcattggaaatgtaaggcgacgttcattttgaaacaaa 25332568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 45147982 - 45148042
Alignment:
Q  66 aactgcccttactttataagaaaaag-acaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| |||||||||||| |||||  ||||  ||||||||||||| ||||||||||||||    
T  45147982 aactgctcttactttataaaaaaaaatacaatcttaaagttgcattaaaaattgtgtgaga 45148042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 12040 - 12219
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||| ||| |||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  12040 agattaaggaatggaatgaaataatcattagacataacacttttactaaactgcc-ttactttataagaaaaagacaaacttaaagttgcattgaaaatt 12138  T
Q  118 gtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcatttt 195  Q
    ||||  |||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  12139 gtgtgagagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 28044101 - 28044319
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||  ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28044101 attaagaaataaaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgt 28044200  T
Q  120 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaa 216  Q
    ||  |||||||  ||| |||| |||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||| |||| ||        |||||    
T  28044201 gtgagagaaaaattggagaggataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaac-aattttttttactaa 28044299  T
Q  217 agtgacactcattttgaaac 236  Q
    ||||||||||||||||||||    
T  28044300 agtgacactcattttgaaac 28044319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 36447567 - 36447757
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 115  Q
    |||||||||||||| |||||||||||| | |||||||||| ||||||  |||||| | ||||||||||||||||||| ||||||||||||| ||||||||    
T  36447567 acagattaagaaatggaatgaaataattactggatataactcttttattaaactgtctttactttataagaaaaagataaaattaaagttgaattgaaaa 36447666  T
Q  116 t--tgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |  |||| |||||||| |||  |||||||||||||||| |||||||||||||| ||||| |||| |||| ||| ||||||||| |||||||    
T  36447667 ttatgtgagagaaaagttggaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttaaaacaaa 36447757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 18886843 - 18886667
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18886843 cacagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaa 18886744  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||||   |||||          ||||||||||| |||||||||||||| ||||| ||||||||| ||| ||||||||| |||||||    
T  18886743 attgtgtg---aaaga----------aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaacaaa 18886667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 32275393 - 32275203
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  |||||||||||||||  | || ||  |||||| |||||||| |||||||||||||||||  |||| |||||||||||||||||    
T  32275393 cacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgcctttactttataagaaaaaatcaaacttaaagttgcattgaaa 32275294  T
Q  115 attgtgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||  |||||| | | ||||||||||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||||||    
T  32275293 attgtgtgaaggaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtggcattcattttgaaacaa 32275203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 41905890 - 41906089
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||  | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41905890 cacagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 41905989  T
Q  115 attgtgt--gagaaaagatgggg--------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||||  |||||||| ||| |          ||||||||||||||  |||| |||||||| |||| |||||||||| ||||||| ||||| |||||||    
T  41905990 attgtgtaagagaaaagttggagtatttattgaggtaaagttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaaa 41906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 22627313 - 22627495
Alignment:
Q  19 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    ||||||| |||  |||||||||||| ||  | ||||||| ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||||||    
T  22627313 gattaaggaatgaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattg 22627412  T
Q  119 tgt--gagaaaagatggggagggtaaagttggaag--gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttg 196  Q
    |||  |||||||| ||| |||||||||||||||||   |||||||||||||| ||||||||||||||| ||||||||||||||    
T  22627413 tgtgagagaaaagttggagagggtaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 22627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 33056242 - 33056433
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttacttta-taagaaaaagacaaaattaaagttgcattgaaaat 116  Q
    |||||||| |||  |||||||||||||||  | ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  33056242 agattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgcccttactttattaagaaaaagacaaatttaaaactgcattgaaaat 33056341  T
Q  117 tgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt----aaatgacattcattttgaaacaaa 203  Q
    |||||  |||||||| ||| |||| ||||||| ||| ||||||||||||||| ||||||||||||    |||||||||| |||||||||||||    
T  33056342 tgtgtgagagaaaagttggagaggataaagtt-gaaagaaaaaattaaagttgtattggaaatgttgtaaaatgacatttattttgaaacaaa 33056433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 42121740 - 42121549
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||| ||||||||||| || ||| ||||||||| |||||| ||||||||||| ||||||||| | | |||||||||||||||||    
T  42121740 cacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttattagaaaaagatacacttaaagttgcattgaaa 42121641  T
Q  115 attg--tgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||  || |||||||| ||| ||| |||||||||||||  |||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  42121640 attgtttgagagaaaagttggagagagtaaagttggaagaaaaaaaattaaagttgtattggaaatataaagtgacattcattttgaaacaa 42121549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 34002087 - 34002277
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||| | ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  34002087 cacagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactgcactttactttataagaaaaagacaaaattaaagttgcattgaa 34002186  T
Q  114 aattgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcat 192  Q
    ||||||||  |||||||| |||          ||||||||||||||||| | ||||||||| || ||||||||||||||| ||||||||||    
T  34002187 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 17869435 - 17869235
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||  ||| || | ||||||||||||||||| ||||| |||||||||||||||||    
T  17869435 cacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtctttactttataagaaaaatacaaacttaaagttgcattgaaa 17869336  T
Q  115 attgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||  |||||||||| |          |||| |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  17869335 attgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcattggaaatgtaaaatgacattcattttgaaacaa 17869236  T
Q  203 a 203  Q
    |    
T  17869235 a 17869235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 236
Target Start/End: Original strand, 40207379 - 40207566
Alignment:
Q  49 atataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttgg 148  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| | |||||| ||  |||| ||||||||     
T  40207379 atataacacttttactaaactgcccttactttataagaaaatgacaaacttaaaattgcattgaaaattgtgag-gaaaagttgaagaggataaagttga 40207477  T
Q  149 aaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    ||| |||||||||||||| ||||  |||| | ||||||||||||||||||| |||        | ||||||||||||||||||||||||    
T  40207478 aagaaaaaaattaaagttgtattaaaaatataaaatgacattcattttgaagcaattttttttggctaaagtgacactcattttgaaac 40207566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 34733500 - 34733394
Alignment:
Q  22 taagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 121  Q
    ||||||||  ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  34733500 taagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtga 34733401  T
Q  122 gagaaaa 128  Q
    |||||||    
T  34733400 gagaaaa 34733394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 3680878 - 3681077
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||| |||| |||||||||||||||| || |||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||    
T  3680878 cacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaa 3680977  T
Q  115 at--tgtgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||  |||| |||||||| | | |         | |||||||||||||| | |||||||||||| ||||| ||||||||| ||||||||||||| ||||||    
T  3680978 attctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 1103681 - 1103482
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 115  Q
    ||||||||||||||  |||||||||||||   || | |||| |||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||||||    
T  1103681 acagattaagaaataaaatgaaataatcaccagacaaaacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaa 1103582  T
Q  116 ttgtgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaa 203  Q
    ||||||  |||||||| ||           ||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  1103581 ttgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaaa 1103482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 40299036 - 40298812
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||| |||||| ||||||||||||| |||||||||         |||||||||||||| |||||||| ||||||||    
T  40299036 cacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttacattgaaa 40298946  T
Q  115 attgtgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||  |||| ||| |         ||||||||||||| || |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  40298945 attgtgtgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 40298846  T
Q  203 annnnnnngactaaagtgacactcattttgaaac 236  Q
            | ||||||||||||||||||||||||    
T  40298845 ttttttttggctaaagtgacactcattttgaaac 40298812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 42259521 - 42259614
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||| ||||| ||| || ||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  42259521 aatgagataattattagacataacacttttactaaaatgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgaga 42259614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 51 - 202
Target Start/End: Complemental strand, 26963643 - 26963478
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgg---------ggag 137  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||| |||||||||||||||||||| |||    |||||||| |||          |||    
T  26963643 ataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgag 26963544  T
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaat-gacattcattttgaaacaa 202  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||| |||||| ||||||||||||    
T  26963543 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 32345789 - 32345991
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  32345789 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 32345888  T
Q  115 attgtgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaac 200  Q
    |||||||    |||||||| |||          ||||||||||||||||| ||||||||||||||  |||| |||||||||  |||||||||||||||||    
T  32345889 attgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaac 32345988  T
Q  201 aaa 203  Q
    |||    
T  32345989 aaa 32345991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 36836123 - 36836013
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||  ||||||||||||||||||||       |||||||| |||||||||||||||||    
T  36836123 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaaattattttgactaaagcgacactcattttgaaac 36836024  T
Q  237 agatgagtata 247  Q
     || |||||||    
T  36836023 ggaggagtata 36836013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 19906555 - 19906413
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatggg---------gagggtaaagttggaaggaaaaaatt 160  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||  |||| |||          ||||||||||||||||| |||||||     
T  19906555 ccttactttataggaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaata 19906456  T
Q  161 aaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||| |||||||||||||||  |||||||||||||||||||    
T  19906455 aaagttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 26527356 - 26527454
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||| ||||| |||||||||| || ||||||| ||||| |||||||  ||||||||||||||||| | ||| ||||||||||||||||||||    
T  26527356 agattaagaaatggaatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaa-aaaaatttaaagttgcattgaaaatt 26527454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 42010553 - 42010640
Alignment:
Q  38 ataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||| || |||| | |||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  42010553 ataatcattagacataatatttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaattgtatgaga 42010640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 22597297 - 22597195
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttga 233  Q
    |||| |||||||| ||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||       | |||||||||||||||||||||    
T  22597297 gaggttaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaattcttttggctaaagtgacactcattttga 22597198  T
Q  234 aac 236  Q
    |||    
T  22597197 aac 22597195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 30515037 - 30514972
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  30515037 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 48838635 - 48838750
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaa-----aaagacaaaattaaagttgcat 109  Q
    |||| |||||| |||  ||||||||||||||| || |||||| || ||| |||||| ||||||||||||| ||     ||||||||| ||||||||||||    
T  48838635 cacaaattaaggaataaaatgaaataatcattagacataacatttatactaaactgaccttactttataaaaataaaaaaagacaaatttaaagttgcat 48838734  T
Q  110 tgaaaattgtgtgaga 125  Q
    ||||||||||||||||    
T  48838735 tgaaaattgtgtgaga 48838750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 10684820 - 10684894
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10684820 ataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgaga 10684894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 39117479 - 39117553
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  39117479 ataacaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgaga 39117553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 19288434 - 19288536
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttga 233  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||| ||||||||||||||||| ||         ||||||||||||||||||||||    
T  19288434 gagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaataatttttttttactaaagtgacactcattttga 19288533  T
Q  234 aac 236  Q
    |||    
T  19288534 aac 19288536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 43813431 - 43813500
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||||||| |||||||    
T  43813431 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaaa 43813500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 242
Target Start/End: Original strand, 29001577 - 29001736
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattg 172  Q
    |||| |||||| ||| || ||||| ||||||||||||||||||||||||||||||             ||||||||||| | |||||||| |||||||||    
T  29001577 cttattttataggaacaaaacaaacttaaagttgcattgaaaattgtgtgagaaa-----------taaaagttggaagaataaaattaaggttatattg 29001665  T
Q  173 gaaatgt-aaatgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaacagatga 242  Q
    ||||||| ||| |||||| ||||||||||||        ||||||||||||||||||||| |||| |||||    
T  29001666 gaaatgtaaaacgacattaattttgaaacaattatttttgactaaagtgacactcattttaaaacggatga 29001736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 31416763 - 31416906
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga---aaagatgg----------ggagggtaaagttggaaggaaaaaat 159  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||   ||| || |           ||||||||||||||||| |||||||    
T  31416763 cttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaat 31416862  T
Q  160 taaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||| ||||| ||||||||| ||| ||||||||| ||||||    
T  31416863 taaagttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 6521960 - 6521907
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  6521960 ccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgaga 6521907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 10684918 - 10685024
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaatga-cattcattttgaaacaaannnnnnngactaaagtgacactcattttgaa 234  Q
    |||||||||||||||| ||||||||||||||  |||| |||||||||  | ||||||||||||||||||       | |||||| |||||||||||||||    
T  10684918 agggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttgaaacaaattattttggctaaagcgacactcattttgaa 10685017  T
Q  235 acagatg 241  Q
    | |||||    
T  10685018 agagatg 10685024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 19277057 - 19277110
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  19277057 ccttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 30833066 - 30833162
Alignment:
Q  31 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 128  Q
    |||||||||||| ||| |||||||||||||||| ||| || | ||  |||||| |||||||||||| ||| |||| || |||||||||||||||||||    
T  30833066 gaatgaaataattattagatataacacttttactaaattgtc-ttgttttatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaaa 30833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 36447083 - 36447225
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaatt 160  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||    |||||||| |||          |||| ||||||||||||  |||||||    
T  36447083 ttactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaatt 36447182  T
Q  161 aaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||| || ||||| |||||| |||||||||||||||||||||||    
T  36447183 aaaattgtattgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 42044066 - 42044131
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||| |||||||||    
T  42044066 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattaattttgaaa 42044131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 47272313 - 47272240
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag 124  Q
    |||||| |||||| |||||||||||  |||||| ||||||||||||  |||| |||||||||||||||||||||    
T  47272313 ataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag 47272240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 33845391 - 33845478
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 128  Q
    |||||||||||||||  || |||||||||||| |||||||||         |||||||||||||| ||||||||||||||||||||||| |||||||    
T  33845391 aatgaaataatcattacatgtaacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaa 33845478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 19920358 - 19920419
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
    |||||||||||||  || |||||||||||||| ||||||||||||||| |||||||||||||    
T  19920358 gagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 18733583 - 18733540
Alignment:
Q  85 gaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaa 128  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaa 18733540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 5723128 - 5723090
Alignment:
Q  87 aaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5723128 aaaagacaaacttaaagttgcattgaaaattgtgtgaga 5723090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 18733502 - 18733452
Alignment:
Q  153 aaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  18733502 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 42259635 - 42259736
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaannnnnnngactaaagtgacactcattttga 233  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| || |||| ||||||||||| ||||||         |||||||||||||| |||||||    
T  42259635 gagggtaaagttggaa-gaaaaaattaaagttgtattgaaaacgtaaaataacattcattttaaaacaattttttttaactaaagtgacacttattttga 42259733  T
Q  234 aac 236  Q
    |||    
T  42259734 aac 42259736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 5723069 - 5723006
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaa 198  Q
    |||||||||||| | || |||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  5723069 gagggtaaagttaggag-aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaa 5723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 36836199 - 36836148
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||  || |||||||| |||||||||||||||||||| |||||||    
T  36836199 ttactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgaga 36836148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 26527483 - 26527544
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcatttt 195  Q
    |||| ||||||| |||| |||||||||||||| ||||| |||||| |||| |||||||||||    
T  26527483 gaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcatttt 26527544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 32873127 - 32873168
Alignment:
Q  21 ttaagaaattgaatgaaataatcattggatataacactttta 62  Q
    ||||||||||||||| |||||||||| ||||||||| |||||    
T  32873127 ttaagaaattgaatgcaataatcattagatataacattttta 32873168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 48259818 - 48260008
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| ||| ||||||||||||| || || ||||||||||||  ||||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  48259818 cacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgcccttgctttataagaaaaagataaacttaaagttgcattgaaa 48259917  T
Q  115 attgtgtg--agaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||  ||||||| | | ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  48259918 attgtgtgaaagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 11650254 - 11650056
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 115  Q
    |||||||||||||||||||||||||| |||| ||||||  | |||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  11650254 acagattaagaaattgaatgaaataaccattagatatagtatttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaa 11650155  T
Q  116 ttgtgtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||| ||| || ||          ||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  11650154 ttgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 40060861 - 40061048
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  ||||||||||| ||| || ||||||||||||| ||| |||||||||||||||||||||||| ||  ||| |||||||||||||    
T  40060861 cacatattaagaaatgaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaa 40060960  T
Q  115 attgtgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||| |||  |||||||| ||| |||||||||||| |||  |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  40060961 attttgtaagagaaaagttggagagggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 40061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 24040983 - 24041155
Alignment:
Q  19 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    ||||||| ||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24040983 gattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattg 24041082  T
Q  119 tgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||             | |||||||||||  |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  24041083 tgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 84473 - 84648
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  84473 cacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaa 84572  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||| ||||             | ||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  84573 attgtgcgaga-------------gaaaaattggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 84648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 52403672 - 52403563
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 115  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  52403672 acagattaagaaatggaatgaaataatcattggatataacactgttattaaactgcccttactttataaggaaaagacaaaattaaagttgcactgaaaa 52403573  T
Q  116 ttgtgtgaga 125  Q
    || |||||||    
T  52403572 ttatgtgaga 52403563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 1430491 - 1430666
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgc-ccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||||||| |    
T  1430491 cacagattaagaaatttaatgaaataataattagatataacacttttactaaactgcactttactttataagaaaaagacaaacttaaagttgcattgga 1430590  T
Q  114 aattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||||| ||             | ||||||||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  1430591 aattgtgtgtga-------------gaaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaaca 1430666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 43929881 - 43929683
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||| | ||| || |||||||||||||||||||| || ||||||||| || ||||    
T  43929881 cacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcgaaa 43929782  T
Q  115 attgtgtgagaaaagatggg----------gagggtaaagttggaaggaaaaaattaaagttatattggaaa-tgtaaatgacattcattttgaaacaa 202  Q
    ||| ||||||| || |  ||          |||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  43929781 attatgtgagagaaaagtggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaacaa 43929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 5317535 - 5317765
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaat 116  Q
    |||||||| |||  ||||||||||||||| || ||||||||||||| ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  5317535 agattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttattttataagaaaaagacaaacttaaagttgcattgaaaat 5317634  T
Q  117 tgt-gtgagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaann 205  Q
    ||| | |||||||| ||           ||||||||||||||||| |||||||||||||| ||||| || |||||| |||||||||||||||||||||      
T  5317635 tgtggagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaattgtaaagtgacattcattttgaaacaaatt 5317734  T
Q  206 nnnnngactaaagtgacactcattttgaaac 236  Q
         |  |||||||||||||||||||||||    
T  5317735 ttgttggataaagtgacactcattttgaaac 5317765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 30006327 - 30006182
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||  |||||||||||||||||||| || |||||||| |||| ||| ||| |||||||||||||||||||| ||| |||||||||||||||||    
T  30006327 cacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttactttataagaaaaagataaatttaaagttgcattgaaa 30006228  T
Q  115 attg--tgtgagaaaagatggggagggtaaagttggaaggaaaaaa 158  Q
    ||||  || |||||||| ||| ||||||||||||| ||| ||||||    
T  30006227 attgtttgagagaaaagttggagagggtaaagttgaaagaaaaaaa 30006182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 1429059 - 1428865
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||| |||| ||||||    
T  1429059 attaagaaattgaatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaacttaaagttgaattggaaattg 1428960  T
Q  119 tgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    |||  |||||||| | |          ||||||||||||| ||| |||||||| ||||| |||| |||||||||| ||||||||||||| |||||    
T  1428959 tgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 28751363 - 28751602
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||| ||||||||||| || |||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  28751363 cacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgcccttactttataagaaaaggacaaacttaaagttacattgaaa 28751462  T
Q  115 attgt--gtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgaca-ttcattttgaaaca 201  Q
    |||||  | |||||||| | |          ||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||||||||| |    
T  28751463 attgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatttcattttgaaata 28751562  T
Q  202 aannnnnnngactaaagtgacactcattttgaaacagatg 241  Q
    |        | |||||||||||||||||||||||| ||||    
T  28751563 attttttttggctaaagtgacactcattttgaaacggatg 28751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 10690910 - 10691020
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  ||||||||||||||| ||||||||| |||||| ||||||| |||||||  ||||||||||||||| |||||||||||||||||    
T  10690910 cacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattgaaa 10691009  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  10691010 attgtgtgaga 10691020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 6332364 - 6332251
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||| ||  |||||| ||||||||||||  ||||||| ||||||||    
T  6332364 cacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatgaaaaagacaaacataaagttacattgaaa 6332265  T
Q  115 attgtgtgagaaaa 128  Q
    ||||||||||||||    
T  6332264 attgtgtgagaaaa 6332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 12002443 - 12002244
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||| |||  ||||||||||||||  || |||| |||||||| |||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  12002443 cacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaa 12002344  T
Q  115 attgtgtgagaaaagatggggag-----------ggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||||||||| |   ||||           ||||||| |||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  12002343 attgtgtgagaaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 17919793 - 17919971
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaa---- 127  Q
    |||||||||||||||  | ||||||||||||| |||||||||||  ||||||  ||||||||||| ||||||||||||||||||||||||||||||        
T  17919793 aatgaaataatcatta-acataacacttttactaaactgcccttgttttatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaag 17919891  T
Q  128 -------agatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
           | ||   ||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  17919892 ttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgatattcattttgaaa 17919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 37437358 - 37437529
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacactttt-accaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| |||||| |||  ||||||||| ||||| || ||||||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  37437358 cacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaa 37437457  T
Q  114 aattgtgtgag---aaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa 182  Q
    |||||||||||   ||||  | | |||| |||||||| ||| ||| ||||||| || ||||| |||||||||    
T  37437458 aattgtgtgagagaaaaaattagagaggataaagttgaaagaaaataattaaaattgtattgaaaatgtaaa 37437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 43105562 - 43105667
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||| | || ||| ||||||||||||||||||| ||||| |||||||||||||||     
T  43105562 attaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaattgc 43105661  T
Q  120 gtgaga 125  Q
    ||||||    
T  43105662 gtgaga 43105667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 50349812 - 50350046
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa------gaaaaagacaaaattaaagttgca 108  Q
    |||| |||||| ||| |||||||||||||||| || ||||||||||||| ||||||||||||||||||||      |||||||||||| |||||||||||    
T  50349812 cacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataattataagaaaaagacaaacttaaagttgca 50349911  T
Q  109 ttgaaaattgtgtgaga--aaagatggggagggtaa--agttggaaggaaaaaattaaagttatattggaaatgtaaa-tgac--attcattttgaaaca 201  Q
    |||||||||||||||||  |||| | | |    ||   || |||||| |||||||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  50349912 ttgaaaattgtgtgagagaaaagtttgagtatttattgaggtggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatattcattttgaaaca 50350011  T
Q  202 aannnnnnngactaaagtgacactcattttgaaac 236  Q
    |        | ||||||||| ||||||||||||||    
T  50350012 attttttttggctaaagtgatactcattttgaaac 50350046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 2459203 - 2459005
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||| |||||| || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  2459203 cacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 2459104  T
Q  115 attgtgtgagaaaag---------atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||||| ||||||||          ||  ||||||||||||||||| ||||||||||||||  |||| |||||||||  ||||||||||||||||||||    
T  2459103 attgtgagagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaaa 2459005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 38132202 - 38132322
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatatt 171  Q
    |||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||           | ||||||||||| |||||||||||||| ||||    
T  38132202 ccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaa-----------gaaaagttggaagaaaaaaattaaagttgtatt 38132290  T
Q  172 ggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||| ||||||||||||||||||||    
T  38132291 ggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 44582791 - 44582931
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaat 159  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||    |||| ||| |         |||||||||||||||| |||||||    
T  44582791 cttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaat 44582890  T
Q  160 taaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  44582891 taaagttgtattggaaatgtaaagtgacatttattttgaaa 44582931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 45749470 - 45749554
Alignment:
Q  31 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 115  Q
    |||| ||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  45749470 gaataaaataatcattagacataacacttttactaaaccgcccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 26252260 - 26252116
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    |||| | | |         |||||||||||||||| ||||||    
T  26252260 ccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaa 26252161  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    || ||||| ||||||||||||||| ||||||||||||||||||||    
T  26252160 tttaagttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 2245982 - 2245880
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||| ||||||| ||||||||  | |||| | |||||| |||||| | || |||||||||||||||||||| |||||| |||||||||||||    
T  2245982 agattaagaaatggaatgaagtaatcattaaacataatatttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattgaaaatt 2245883  T
Q  118 gtg 120  Q
    |||    
T  2245882 gtg 2245880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 22665091 - 22664937
Alignment:
Q  58 ttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatgggg---------agggtaaagttgg 148  Q
    |||||| |||||  |||||||||||||||| |||||||| ||||||||| ||| ||||||||| |||| ||| ||| |         |||||||||||||    
T  22665091 ttttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaattgtgagagagaagttggagtatttattgagggtaaagttgg 22664992  T
Q  149 aaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||| ||  |||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  22664991 aagaaattaattaacgttgtattggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 254926 - 255068
Alignment:
Q  75 tactttataagaaaaagacaaaattaaagttgcattgaaaattgt----gtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaatt 160  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    |||||||||| |||          |||||||||||||||||  ||||||||    
T  254926 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaatt 255025  T
Q  161 aaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||  ||||||||||||||  |||||||||||||||||||    
T  255026 aaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 12851870 - 12851739
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgtga--gaaaag---------atggggagggtaaagttggaaggaaaaaattaaagttatatt 171  Q
    |||||||||||||||||||||||||||| |||||||| |||  ||||||         ||   |||||||||||||| || |||||||||||||| ||||    
T  12851870 aagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttgagtatatattgagggtaaagttgggagaaaaaaattaaagttctatt 12851771  T
Q  172 ggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||| ||||||||||||||||||||    
T  12851770 ggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 236
Target Start/End: Complemental strand, 43755187 - 43755017
Alignment:
Q  53 aacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaagg 152  Q
    ||||||||||| |||  |||||||||| |||||||||||||||| |||||||||  |||||||||||||||||             | |||||||||| |    
T  43755187 aacacttttactaaatcgcccttacttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgaga-------------gaaaagttggaa-g 43755102  T
Q  153 aaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||||||||||| ||||| ||||||||| |||| |||||||||||| ||        | ||||||||||||||||||||||||    
T  43755101 aaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttgaaataattttttttggctaaagtgacactcattttgaaac 43755017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 49894943 - 49894807
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaa 150  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||| |||||||||||||||||||             | |||||| |||    
T  49894943 ataacaattttactaaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgaga-------------gaaaagttagaa 49894857  T
Q  151 ggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaa 199  Q
    | |||||||||||||| |||||||||||| |||| |||||||||||||||    
T  49894856 gaaaaaaattaaagttgtattggaaatgtaaaataacattcattttgaaa 49894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 44583968 - 44583869
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  ||| ||||||||||| || |||||| |||| | |||||||| ||| ||||||||||||||||||| |||| ||||||||||||    
T  44583968 cacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgcc-ttattttataagaaaaagacaaacttaatgttgcattgaaa 44583870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 48319981 - 48320144
Alignment:
Q  40 aatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat-tgtgtgagaaaagatggggagg 138  Q
    ||||||| || |||| |||||||| ||| |||||||||||||||| | ||||||||| |||||||||||| |||| | |||| |||| ||  ||| |||     
T  48319981 aatcattagacataagacttttactaaattgcccttactttataaaagaaagacaaacttaaagttgcatcgaaattgtgtgagagataaattggagaga 48320080  T
Q  139 gtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||| ||| |||||||||||| || ||||| |||| |||| | ||||| ||||| ||||||    
T  48320081 gtaaagtt-gaaagaaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 17806392 - 17806563
Alignment:
Q  77 ctttataagaaaaagacaaaattaaagttgcattgaaaattg--tgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagt 165  Q
    |||||||||||||||||||| ||||| |||||||||||||||  || |||||||| |||          || |||||| ||||||| |||||||||||||    
T  17806392 ctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaagtaaaaaattaaagt 17806491  T
Q  166 tatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    | |||||||||||||||  |||| ||||||| ||||||        | ||||||||||||||||||||||||    
T  17806492 tgtattggaaatgtaaagcgacactcattttaaaacaattttttttggctaaagtgacactcattttgaaac 17806563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 50158276 - 50158342
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa 84  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  50158276 agattaagaaatataatgcaataatcattggatataacacttttactaaacttcccttgctttataa 50158342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 40719195 - 40719020
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagat 131  Q
    ||||||||||||||| || || ||| |||||| |||||||| ||  |||||| |||||||| ||| ||||||||| ||||| |||||||| |||||| |     
T  40719195 aatgaaataatcattagacatcacatttttactaaactgccattgttttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaaaaag 40719096  T
Q  132 ggggag-----------ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
      ||||           |||||||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||    
T  40719095 ttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 42650261 - 42650314
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  42650261 ccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 42650314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 45377236 - 45377301
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||||||||| || |||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  45377236 gagggtaaagttgggagaaaaaaagtaaagttgtattggaaatgtaaagtgacattcattttgaaa 45377301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 5854238 - 5854289
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  5854238 ttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgaga 5854289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 672300 - 672346
Alignment:
Q  79 ttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  672300 ttataagaaaaagacaaacttaaatttgcattgaaaattgtgtgaga 672346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 15698705 - 15698905
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccct-tactttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| |||||| |||  ||| ||||||||||| || |||||||||| |  ||||| || | |||||||||||||||||| ||| ||||||||  ||||||    
T  15698705 cacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtactttataagaaaaagataaacttaaagttctattgaa 15698804  T
Q  114 aattgtgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    |||| ||||||| || |   || |        ||| ||||||||||||| | |||||||||||| |||||||||| |||| ||||||||||||| |||||    
T  15698805 aattatgtgagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcattttaaaaca 15698904  T
Q  202 a 202  Q
    |    
T  15698905 a 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 28200234 - 28200287
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  28200234 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgcgaga 28200287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 9552368 - 9552420
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  9552368 cttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgaga 9552420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 44024611 - 44024543
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||  | |||||||||||||||||    
T  44024611 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttgaaacaa 44024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 43738214 - 43738317
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||  ||| ||||||| ||| || |||| | |||||| ||||| || ||||||||||||||||||| |||  ||||||| | ||||||||||     
T  43738214 attaagaaatgaaataaaataattattagacataatatttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaattgc 43738313  T
Q  120 gtga 123  Q
    ||||    
T  43738314 gtga 43738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 35149394 - 35149436
Alignment:
Q  75 tactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  35149394 tactttataagaaaaagataaaattaaagttgcattgataatt 35149436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 50158397 - 50158458
Alignment:
Q  140 taaagttggaaggaaaa-aattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||||||| |||| |||||||||| ||||| ||||||||| |||||||||||||||||    
T  50158397 taaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 50158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 9552436 - 9552484
Alignment:
Q  155 aaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 50591309 - 50591381
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga 123  Q
    |||||| |||||| ||| |  ||||| |||||| ||| |||||||| ||||| ||||||||||||||||||||    
T  50591309 ataacaattttactaaaataaccttattttataggaacaagacaaacttaaaattgcattgaaaattgtgtga 50591381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 26582985 - 26582923
Alignment:
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||| |||| |||||||||||||| ||||||||||||||| | ||||| ||||| ||||||    
T  26582985 aaagttcgaagaaaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 2245852 - 2245791
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaa-atgacattcatttt 195  Q
    ||||||||||||| ||| |||| ||||||||| ||||| ||||||||  |||||||||||||    
T  2245852 gagggtaaagttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcatttt 2245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 5854312 - 5854381
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    |||| |||||||||||  ||||||||||||||  ||||||||||||||  |||||| ||| |||||||||    
T  5854312 gaggataaagttggaataaaaaaattaaagttgcattggaaatgtaaagcgacatttattctgaaacaaa 5854381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 48260021 - 48260050
Alignment:
Q  213 ctaaagtgacactcattttgaaacagatga 242  Q
    ||||||||||||||||||||||||||||||    
T  48260021 ctaaagtgacactcattttgaaacagatga 48260050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 15647150 - 15647215
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||| || ||||||  ||| || ||||| ||||||||| ||||||||||||||||||||    
T  15647150 agggtaaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 42650339 - 42650383
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa 182  Q
    ||||||| |||||| |||||||||||||| |||| ||||||||||    
T  42650339 ggtaaagctggaagaaaaaaattaaagttgtattagaaatgtaaa 42650383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 43738344 - 43738408
Alignment:
Q  139 gtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||| ||| |||||||| ||||| ||||| |||||| || ||||||||||||| ||||||    
T  43738344 gtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 44583837 - 44583769
Alignment:
Q  136 agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaa-atgacattcattttgaaacaaa 203  Q
    ||||||||||  |||| |||||||||||||| ||||  ||||||||  ||||||||||||| |||||||    
T  44583837 agggtaaagtcagaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaacaaa 44583769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 1924634 - 1924855
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||  ||||||||||||||||||||||||  |||||| ||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  1924634 attaagaaatataatgaaataatcattggatataacgtttttactaaacttctcttactttataaggaaaatacaaaattaaagttgcattgaaaattgt 1924733  T
Q  120 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaaannnnnnngactaa 216  Q
    ||  |||||||| ||| |||||| ||||| |||  |||||||||||||| ||||| |||||| |||||||||||||||| |||||||       | ||||    
T  1924734 gtgagagaaaagttggagagggtgaagtt-gaaaaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaatttttttggctaa 1924832  T
Q  217 agtgacactcattttgaaacaga 239  Q
    |||||||||||||||||||||||    
T  1924833 agtgacactcattttgaaacaga 1924855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 12828653 - 12828835
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaag 129  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||    
T  12828653 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaag 12828752  T
Q  130 atg---------gggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
     ||           ||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  12828753 ttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 241
Target Start/End: Complemental strand, 29915740 - 29915499
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| ||||||||||||||||||||||| ||| || ||||||||||||| |||||||| || |||||||||||||||||||||  ||||||||||||| |    
T  29915740 cacatattaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcattgga 29915641  T
Q  114 aattgtgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaac 200  Q
    ||||||||  |||||||| |||          |||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  29915640 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 29915541  T
Q  201 aa-annnnnnngactaaagtgacactcattttgaaacagatg 241  Q
    ||         |||||||||||||||||||||||||| ||||    
T  29915540 aatttttttttgactaaagtgacactcattttgaaacggatg 29915499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 31275596 - 31275796
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| ||   |||||||||| |||| ||  ||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  31275596 cacagattaaggaaagaaatgaaataaccattagacgtaacacttttaccaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaa 31275695  T
Q  115 attgtgtgag--aaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||||||  ||||| |||          |||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  31275696 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 31275795  T
Q  202 a 202  Q
    |    
T  31275796 a 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 26669056 - 26669247
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat- 116  Q
    ||||||||||||  ||||||||||| ||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  26669056 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 26669155  T
Q  117 -tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttga 197  Q
     |||| |||||||| |||          |||| |||||||||| |  ||||||||||||| |||||||||| |||| |||||||||||||||    
T  26669156 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 23936538 - 23936773
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| |||||||||| |||||||||||||||| ||||||||| ||||||  || ||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  23936538 cacatattaagaaatggaatgaaataatcattagatataacatttttactgaattgccctttactttataagaaaaaaacaaatttaaagttgcattgaa 23936637  T
Q  114 aattgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaa 203  Q
    ||||||| |||||| | |||          ||||||||||||||||| ||||||| ||||||  |||| ||||||||| | |||||||||||||||||      
T  23936638 aattgtgagagaaaggttggagtatatattgagggtaaagttggaagaaaaaaatgaaagttgcattgaaaatgtaaagtaacattcattttgaaacagt 23936737  T
Q  204 nnnnnnngactaaagtgacactcattttgaaacaga 239  Q
             |||||||||||||||||||||||||||    
T  23936738 ttttttttgctaaagtgacactcattttgaaacaga 23936773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 29927405 - 29927205
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||| |||| |||||||||||||||| || ||||||||||||| ||  |  ||||||||||||||||||||||||| |||||||||||||||||    
T  29927405 cacagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaa 29927306  T
Q  115 att--gtgtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    | |   || |||||||| |||          |||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  29927305 actacatgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 29927206  T
Q  202 a 202  Q
    |    
T  29927205 a 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 32258910 - 32258720
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||||| ||||||           |||||||||||||||||||||    
T  32258910 cacagattaagaaatcgattgaaataatcattggatataacgcttttactaaactgcccttgctttat-----------aaaattaaagttgcattgaaa 32258822  T
Q  115 attgtgtgag---aaaagatgggg----------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaac 200  Q
    ||||||||||   ||||| ||| |          ||| |||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  32258821 attgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaac 32258722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 34439368 - 34439470
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||  ||| ||||||| | |||||||||||||||||||  ||||||||||||| ||||||    
T  34439368 attaagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttattttataagaaaaagacaaacataaagttgcattggaaattg 34439467  T
Q  119 tgt 121  Q
    |||    
T  34439468 tgt 34439470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 17345146 - 17345290
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaa 158  Q
    |||||||||||||||| |||||||| || |||||||||||||||||||||    |||||||| |||          ||||||||||||||||| |||| |    
T  17345146 ccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaata 17345245  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||| |||| |||||||||| ||| ||||||||| ||||||    
T  17345246 ttaaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 6143147 - 6143082
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||| ||||||    
T  6143147 ggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 34576684 - 34576542
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 160  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||||||||    |||| ||  |         ||| |||||||||||| ||||||||    
T  34576684 ttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaagaaaaaaatt 34576585  T
Q  161 aaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||| |||||||||||| |||||| ||||||||| ||||||    
T  34576584 aaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 4123941 - 4124009
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||| ||| |||||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  4123941 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 11785189 - 11785255
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  11785189 gagggtaaagttggaag-aaaaaattaaagttgtattggaaatgtaaagtgaca-tcattttgaaacaa 11785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 10494760 - 10494827
Alignment:
Q  59 tttaccaaactgcccttactttataagaaaa-agacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||| ||||| ||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgaga 10494827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 4131903 - 4132008
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||||||||  ||| |||||||||||  |||||||| |||||| ||||| || ||| |||||||||||||   |||| | || |||||||||||    
T  4131903 cacatattaagaaataaaattaaataatcattatatataacatttttactaaactacctttattttataagaaaaa---aaaacttaaattgcattgaaa 4131999  T
Q  115 attgtgtga 123  Q
    |||||||||    
T  4132000 attgtgtga 4132008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 30627157 - 30627044
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttga 233  Q
    |||||||||||||  || |||||||||||||| ||||| |||| |||| ||||||| |||||||||||||       | ||||||||||||||||| |||    
T  30627157 gagggtaaagttgagagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaattttttag-ctaaagtgacactcattatga 30627059  T
Q  234 aacag-atgagtata 247  Q
    ||||| |||||||||    
T  30627058 aacagaatgagtata 30627044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 34439503 - 34439567
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| ||| ||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  34439503 ggtaaagttggaag-aaagaatgaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 34439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 4132061 - 4132129
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||| ||| |||||||||||||| ||||  ||||||||| ||||||||||||| ||||||    
T  4132061 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 26189651 - 26189506
Alignment:
Q  72 ccttactttataagaaaaaga-caaaattaaagttgcattgaaaattgtgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaa 157  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||    |||||||  |||          ||||||||||||||||| ||||     
T  26189651 ccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaat 26189552  T
Q  158 attaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    |||||||||  ||||||||||| |||  ||||||||||||||||||    
T  26189551 attaaagttgcattggaaatgtaaaacaacattcattttgaaacaa 26189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 10494850 - 10494916
Alignment:
Q  137 gggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||| ||||||| ||| ||||||||||||||  |||||||||||||| ||||||||||||| ||||||    
T  10494850 gggcaaagttgaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 6140662 - 6140598
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||  |||||||||||| ||||||    
T  6140662 ggtaaagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 25932771 - 25932718
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||  || |||||||| |||||||| |||||||||||||||||||    
T  25932771 ccttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgaga 25932718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 6992543 - 6992508
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgc 107  Q
    ||||||||||||||||||||||||| ||||||||||    
T  6992543 ccttactttataagaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 30627262 - 30627184
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgt 119  Q
    ||||||||||||||| |||||||||||||||| ||| || ||         |||||||| ||||| ||||||||||||||||||||||    
T  30627262 aatgaaataatcattagatataacacttttactaaagtgtcc---------aagaaaaaaacaaatttaaagttgcattgaaaattgt 30627184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 3015964 - 3015919
Alignment:
Q  153 aaaaaattaaagttatattggaaatgtaaa-tgacattcattttga 197  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  3015964 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 3015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 19689809 - 19689858
Alignment:
Q  22 taagaaattgaatgaaataatcattggatataacacttttaccaaactgc 71  Q
    |||||||| |||||||||||| ||| ||||||||| |||||| |||||||    
T  19689809 taagaaatggaatgaaataattattagatataacaattttactaaactgc 19689858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 4123815 - 4123918
Alignment:
Q  20 attaagaaattgaatgaaat-aatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    |||||||||| |||| |||| |||||||  | |||| | |||||  |||||  ||||| |||||||| |||| ||||| ||||| |||||||||||||||    
T  4123815 attaagaaatagaattaaattaatcattacacataataattttattaaactatccttattttataaggaaaaaacaaacttaaa-ttgcattgaaaattg 4123913  T
Q  119 tgtga 123  Q
    |||||    
T  4123914 tgtga 4123918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 8052410 - 8052343
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||| |||| || |||||||||||||| |||| ||||| |||| ||||||||||||| ||||||    
T  8052410 gagggtaaaattgggag-aaaaaattaaagttgtattagaaatataaagtgacattcattttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 7612694 - 7612496
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7612694 cacagattaagaaatagaatgaaataatcattggatataacgcttt-actaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 7612596  T
Q  115 attgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||  |||||||| ||| |         ||||||||||||||||  |||| |||| ||| ||||| ||||||||| ||||||||||||| ||||||    
T  7612595 attgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 38329010 - 38329218
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| ||| |||||||||||||||| || ||||||||||||| |||||||| |||||||||||  |||||||||| |||||||||||||||||    
T  38329010 cacagattaaggaatggaatgaaataatcattagacataacacttttactaaactgcc-ttactttataatcaaaagacaaacttaaagttgcattgaaa 38329108  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngac 213  Q
    |||||||             ||||||||||||| ||| |||||||||||||| ||||| |||| |||| ||||||||||||| |||||||       |||    
T  38329109 attgtgt-------------gagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaacaaatttttttgac 38329195  T
Q  214 taaagtgacactcattttgaaac 236  Q
    |||||||||||||||||||||||    
T  38329196 taaagtgacactcattttgaaac 38329218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 45187251 - 45187476
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| || || |||||||||| |||||| ||||  ||||||||||||||||||| |||||||||| ||||||    
T  45187251 cacagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaaagacaaacttaaagttgctttgaaa 45187350  T
Q  115 attgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngac 213  Q
    |||||| |||||||| | | |||| ||| |||  ||| |||||||||||||| ||||| |||| |||| ||||||| |||||||||||||       | |    
T  45187351 attgtgagagaaaagttagagaggataatgttaaaagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaatatttttggc 45187450  T
Q  214 taaagtgacactcattttgaaacaga 239  Q
    |||||||| ||| |||||||||||||    
T  45187451 taaagtgagacttattttgaaacaga 45187476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 1774085 - 1774248
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattgg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | | ||| ||||||||||||| |||||||||||||| |||||     
T  1774085 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtaagagaaaagttagagagcgtaaagttggaagaaaaaaattaaagttgtattga 1774184  T
Q  174 aaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    ||||||||| ||||||||||||| ||||||        | ||||||||||||||||||| ||||    
T  1774185 aaatgtaaattgacattcattttaaaacaattttttttggctaaagtgacactcattttaaaac 1774248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 27109775 - 27109976
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 113  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||| ||| || | || |||||||||||||| |||||| |||||||||||||| |    
T  27109775 cacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttttactttataagaaaaggacaaacttaaagttgcattgga 27109874  T
Q  114 aattgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    ||||||||  |||||||| | |          ||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  27109875 aattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatggaaagtgacattcattttgaaaca 27109974  T
Q  202 aa 203  Q
    ||    
T  27109975 aa 27109976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 236
Target Start/End: Complemental strand, 22601315 - 22601100
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga-aaaga 130  Q
    ||||||||||||||| || ||||| ||||||| ||| || | ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||     
T  22601315 aatgaaataatcattagacataactcttttactaaattgtctttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaagg 22601216  T
Q  131 tggg----------gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagt 219  Q
    | ||          |||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||       | |||||||    
T  22601215 ttggagtatttatcgagggtaaagttggaa-gaaacaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaaactttttggctaaagt 22601117  T
Q  220 gacactcattttgaaac 236  Q
    ||||||||| |||||||    
T  22601116 gacactcatcttgaaac 22601100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 2067894 - 2067788
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||  ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  2067894 agattaagaaatggaatgaaataatcatttgatataacgcttttattaaactgcccttactttataaggaaaagaccaaattaaagttgcattaaaaatt 2067795  T
Q  118 gtgtgag 124  Q
    |||||||    
T  2067794 gtgtgag 2067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 9022593 - 9022393
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaatt-aaagttgcattgaa 113  Q
    |||||||||| |||| ||||||| |||||||| || ||||||||||||| ||||||| |||  |||||| |||||||||||| || ||||||||||||||    
T  9022593 cacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgttttatatgaaaaagacaaacttaaaagttgcattgaa 9022494  T
Q  114 aattgtgtgag--aaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
    |||||||||||  ||||| |||          ||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||| |||||    
T  9022493 aattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcattttaaaaca 9022394  T
Q  202 a 202  Q
    |    
T  9022393 a 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 236
Target Start/End: Original strand, 29931224 - 29931419
Alignment:
Q  43 cattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaagatggggagggt 140  Q
    ||||| ||||||||||||||  |||||||| ||| ||||||||| ||||| |||||||||||||||||||||||  |||| |||||||| | | ||| ||    
T  29931224 cattgaatataacacttttattaaactgcctttattttataagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtttgagagagt 29931323  T
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaaannnnnnngactaaagtgacactcattttgaaac 236  Q
    |||||| |||| |||||||||||||| ||||||||||||||| ||| ||| ||||| ||||||        | ||||||||||||||||||||||||    
T  29931324 aaagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaacaattttttttg-ctaaagtgacactcattttgaaac 29931419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 32326680 - 32326793
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| ||  |||||||||||| |||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  32326680 cacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttgttttatatgaaaaagacaaatttaaagttgcattgaaa 32326779  T
Q  115 attgtgtgagaaaa 128  Q
    ||||||||||||||    
T  32326780 attgtgtgagaaaa 32326793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 36915561 - 36915365
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 115  Q
    |||||||||| ||| |||||||||||||||| || |||| | |||||| ||| |||||||  |||||| |||||||||||| ||||||||||||||||||    
T  36915561 acagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaa 36915462  T
Q  116 ttgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||| || ||||  | |          || |||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  36915461 ttgtgagaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 6839404 - 6839294
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||| |||| |||||||||||||||| || ||||||||||||| ||| |||| |||||||||||||||||||||||  |||| |||||||||||    
T  6839404 cacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgcattgaaa 6839305  T
Q  115 attgtgtgaga 125  Q
    ||| |||||||    
T  6839304 attatgtgaga 6839294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 199
Target Start/End: Complemental strand, 16209102 - 16208951
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaagatggggagggtaaagttgg 148  Q
    ||||||||||||  || ||| ||||| |||||| |||||||||||| |||||||||||||||||||  |||| |||||||| ||  ||||||||| ||      
T  16209102 ataacacttttattaatctgtccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttgtagagggtaaaattta 16209003  T
Q  149 aaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||| |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  16209002 aagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 16208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 11335994 - 11336098
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||  |||||| ||| |||| |||||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||||    
T  11335994 cacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaa------ttactttataagaaaaagacaaaattaaagttgcattgaaa 11336087  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  11336088 attgtgtgaga 11336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 34168224 - 34168355
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagtt 166  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||     |   ||||||||||||||||| ||||| ||||||||    
T  34168224 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaagagtatttcttgagggtaaagttggaagaaaaaagttaaagtt 34168323  T
Q  167 atattggaaatgtaaa-tgacattcattttga 197  Q
     ||||| ||||||||| |||||||||||||||    
T  34168324 gtattgaaaatgtaaagtgacattcattttga 34168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 7129476 - 7129302
Alignment:
Q  18 agattaagaaattgaatgaaata-----atcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 112  Q
    |||||||||||| ||||||||||     ||||||| ||||||| ||||||| ||||||   |||||||||||||| |||||||||||||||||||||||     
T  7129476 agattaagaaatggaatgaaatagtataatcattgaatataacgcttttactaaactgattttactttataagaataagacaaaattaaagttgcattgg 7129377  T
Q  113 aaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||||||||             | ||||||||||| ||||||||||||||  |||| ||||||||| |||||||||||||||||    
T  7129376 aaattgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaa 7129302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 18666534 - 18666672
Alignment:
Q  49 atataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttgg 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||||| ||||||||||||||             | ||||||||    
T  18666534 atataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgaga-------------gaaaagttgg 18666620  T
Q  149 aaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||| |||||| |||||||  |||||||||||||| |||||||||||||||||    
T  18666621 aagaaaaaaactaaagttgcattggaaatgtaaagtgacattcattttgaaa 18666672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 30789115 - 30788934
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat--tgtgtgagaaaag 129  Q
    ||||||||||||||| || ||||||||||||  ||| || ||||||||||||||||||||||||| ||||||||| |||||||||  |||| ||||||||    
T  30789115 aatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaag 30789016  T
Q  130 atgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaaca 201  Q
     ||| |         ||||||||||| |||| |||||||||||||| ||||| | ||||||| ||||||| ||||| |||||    
T  30789015 ttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 8471399 - 8471279
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatatt 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||           ||| | ||||||||||| ||||||||||||||  |||    
T  8471399 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtga-----------gagagaaaagttggaagaaaaaaattaaagttgcatt 8471311  T
Q  172 ggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||  |||||||||||||||||||    
T  8471310 ggaaatgtaaagcgacattcattttgaaacaa 8471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 156358 - 156239
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa 182  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||| || | | |||  |||||||||| || ||||||||||||||||||||| ||||||||    
T  156358 aagaaaaggacaaacttaaagttgtattgaaaattgtgcgagagaaaa-gtggaaagtaaagttgggagaaaaaaattaaagttatattgggaatgtaaa 156260  T
Q  183 -tgacattcattttgaaacaa 202  Q
     ||||||||||||||||||||    
T  156259 gtgacattcattttgaaacaa 156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 41415012 - 41414847
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--aaaag 129  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||||||||||  |||||    
T  41415012 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 41414914  T
Q  130 atggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcatttt 195  Q
     || ||| |||||| ||||||| ||||||||||||| |||||  |||| |||| ||||||| |||||    
T  41414913 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttatttt 41414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 32737961 - 32737861
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||   ||||||||| ||||||||||||||||||| ||| ||||| |||||||||||    
T  32737961 acagattaagaaattgaatgaaat-atcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaa-ttgcattgaaa 32737864  T
Q  115 att 117  Q
    |||    
T  32737863 att 32737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 24732144 - 24732079
Alignment:
Q  16 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttacttta 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  24732144 acagattaagaaattgaatgaaatagtcattggatataacacttttactaaactgcccctacttta 24732079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 202
Target Start/End: Original strand, 14541737 - 14541900
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatgggg---------aggg 139  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||  |||| ||  |         |||     
T  14541737 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaagga 14541836  T
Q  140 taaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  14541837 taaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 11257736 - 11257627
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| |||||||||| |||||||||||| |||  | | |||| |||||| ||||| || ||| ||||||||||| ||||||| |||||||||||||||||    
T  11257736 cacaaattaagaaatggaatgaaataattattaaaaa-aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaa 11257638  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  11257637 attgtgtgaga 11257627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 41790113 - 41790206
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||| || |||| |||||||  ||| || | || |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  41790113 aatgaaataatcattagacataatacttttattaaattgtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgaga 41790206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 2803268 - 2803393
Alignment:
Q  82 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgagaaaagatggggagggtaaagttggaag---gaaaaaattaaagttatattggaaatg 178  Q
    ||||||||||||||| ||||||||| |||||||||||||  ||| || |   ||||||||||||||| ||   |||||||||||| || ||||| |||||    
T  2803268 taagaaaaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagttggagggtaaagttgggagggagaaaaaattaaaattgtattgaaaatg 2803367  T
Q  179 taaa-tgacattcattttgaaacaaa 203  Q
    |||| ||||||| |||||||||||||    
T  2803368 taaagtgacatttattttgaaacaaa 2803393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 34461595 - 34461737
Alignment:
Q  73 cttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaa-aa 158  Q
    ||||||||| | ||| |||||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| |||| ||    
T  34461595 cttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaa 34461694  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaac 200  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  34461695 ttaaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 26439102 - 26438980
Alignment:
Q  74 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttatat 170  Q
    ||||||||||| |||||  |||| ||||||||||||||||||||||||  |||||||| | | |||| ||||||||||||  |||||||||||||| ||     
T  26439102 ttactttataacaaaaa--caaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagaggataaagttggaagaaaaaaaattaaagttgta- 26439006  T
Q  171 tggaaatgtaaa-tgacattcatttt 195  Q
    |||||||||||| || ||||||||||    
T  26439005 tggaaatgtaaagtggcattcatttt 26438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 5588563 - 5588628
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  5588563 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 5588426 - 5588517
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcatt 110  Q
    ||||||||||||  |||||||||||||||  | |||||| |||||| |||||| ||| | ||||||||||||||||||| |||||||| ||||    
T  5588426 agattaagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagttacatt 5588517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 3095590 - 3095656
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaac 200  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||| | ||||||||||| ||||    
T  3095590 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 27416643 - 27416593
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtg 122  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  27416643 ccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtg 27416593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 2812968 - 2812915
Alignment:
Q  20 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc 73  Q
    |||||| |||||||||||||||||||| || ||||||||||||| |||||||||    
T  2812968 attaagtaattgaatgaaataatcattagacataacacttttactaaactgccc 2812915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 8382501 - 8382625
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaattgtgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatatt 171  Q
    |||||||||||||| ||| ||||||||||||||||||||  |||||||| |||          |||||||||||||  || |||||||||||||| ||||    
T  8382501 aagaaaaagacaaacttatagttgcattgaaaattgtgtgagagaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtatt 8382600  T
Q  172 ggaaatgtaaa-tgacattcatttt 195  Q
    | ||||||||| |||||||||||||    
T  8382601 gaaaatgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 13109129 - 13109076
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  13109129 ccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgaga 13109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 39970496 - 39970412
Alignment:
Q  32 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||||||||||||| || ||| ||||||||| |||||||||         |||||||||||||| ||||||||||||||||||||||| ||||    
T  39970496 aatgaaataatcattagacataccacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 39970412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 5044218 - 5044290
Alignment:
Q  51 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtga 123  Q
    |||| |||||||  ||||||| |||||||||||| ||||| ||||| ||||||||| ||| ||||||||||||    
T  5044218 ataatacttttattaaactgctcttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtga 5044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 42709949 - 42710048
Alignment:
Q  19 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattg 118  Q
    |||||||||||| ||| |||| |||||| || || ||||||  || |||||  ||||||||||| | ||||||| |||||||||||||| ||||||||||    
T  42709949 gattaagaaattaaataaaattatcattagacatgacacttg-actaaactatccttactttattaaaaaaagataaaattaaagttgcgttgaaaattg 42710047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 8107191 - 8107304
Alignment:
Q  82 taagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttatattggaaatgt 179  Q
    ||||||||||||||| ||||||||  |||||||||||| |||||  |||| ||| |||  |||| ||  ||  |||||||||||||| ||||| ||||||    
T  8107191 taagaaaaagacaaatttaaagttctattgaaaattgtctgagagaaaagttggagagaataaaatttaaaaaaaaaaattaaagttgtattgaaaatgt 8107290  T
Q  180 aaa-tgacattcat 192  Q
    ||| ||||||||||    
T  8107291 aaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 27416565 - 27416502
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||||||||| |  ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  27416565 gagggtaaagttggacg--aaaaactaaagttgtattggaaatgtaaagtgacattcattttgaaa 27416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 33870817 - 33870755
Alignment:
Q  138 ggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    |||||||||||||| |||||||||||||| ||||| |||| |||| |||||| ||||||||||    
T  33870817 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccattttgaaa 33870755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 35052531 - 35052469
Alignment:
Q  141 aaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||| |||||||||||| ||||||    
T  35052531 aaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 2067770 - 2067725
Alignment:
Q  153 aaaaaattaaagttatattggaaatgtaaatgacattcattttgaa 198  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||    
T  2067770 aaaaaattaaaattgtattgaaaatgtaaatgacattcattttgaa 2067725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 39970390 - 39970323
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||||||||| || |||||| ||| ||| ||||||||||||||| | ||||||||||||||||||    
T  39970390 gagggtaaagttgggag-aaaaaactaatgttgtattggaaatgtaaagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 42946188 - 42946120
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgt-aaatgacattcattttgaaacaa 202  Q
    ||||||||| ||| ||| |||||||||||||| ||||  |||||| |||||||||||||||| ||||||    
T  42946188 gagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 32061414 - 32061468
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaact 69  Q
    |||| |||||||||||||| |||||||||||  || ||||||||||||| |||||    
T  32061414 cacatattaagaaattgaacgaaataatcatcagacataacacttttactaaact 32061468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 32661430 - 32661392
Alignment:
Q  87 aaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  32661430 aaaagacaaacttaaagttgtattgaaaattgtgtgaga 32661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 3095468 - 3095525
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 72  Q
    |||| ||||| |||| ||||||||||||||||  |||| |||||||||| ||||||||    
T  3095468 cacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgcc 3095525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 13109045 - 13108989
Alignment:
Q  143 agttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaa 199  Q
    ||||||||| ||||||||||||||  |||| ||||||||| |||||||||||||||||    
T  13109045 agttggaag-aaaaaattaaagttgcattgaaaatgtaaaatgacattcattttgaaa 13108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 32661371 - 32661326
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgta 180  Q
    |||||||||||||| || |||||||||||||| ||||| |||||||    
T  32661371 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgta 32661326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 11257601 - 11257540
Alignment:
Q  140 taaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||  ||||||||||||| ||||  ||||||||| ||||||||||||| ||||||    
T  11257601 taaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 1737 - 1546
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat- 116  Q
    ||||||||||||  ||||||||||| ||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  1737 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1638  T
Q  117 -tgtgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttga 197  Q
     |||| |||||||| |||          |||| |||||||||| |  ||||||||||||| |||||||||| |||| |||||||||||||||    
T  1637 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 1546  T

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Target: scaffold0580 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 1768 - 1689
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaa 97  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  1768 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 1689  T

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Target: scaffold0580; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 9507 - 9428
Alignment:
Q  18 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaa 97  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  9507 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 9428  T

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Target: scaffold0238 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 15995 - 16104
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    |||| ||||| ||||| |||||||||||||||  |||||||| |||||| ||||| || ||||||||||| |||| |||||| |||||||||||||||||    
T  15995 cacatattaaaaaattaaatgaaataatcattatatataacatttttactaaactacctttactttataa-aaaatgacaaacttaaagttgcattgaaa 16093  T
Q  115 attgtgtgaga 125  Q
    |||||||||||    
T  16094 attgtgtgaga 16104  T

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Target: scaffold0047 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 70465 - 70609
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 158  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    |||| ||| |         |||||||||||||||| ||||||    
T  70465 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 70564  T
Q  159 ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||  |||| ||||||||| ||||||||||||||||||||    
T  70565 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 70609  T

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Target: scaffold0194 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 8346 - 8277
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa 84  Q
    |||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  8346 cacagattaaaaaatggaatgaaataatcattggatataaggcttttactaaactgcccttgctttataa 8277  T

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Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 8221 - 8156
Alignment:
Q  140 taaagttggaaggaaaaaa--ttaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||||||| ||| ||||||  |||||||| ||||| ||||||||| ||||||||||||||||||||    
T  8221 taaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaacaa 8156  T

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Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 321792 - 321724
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||| ||||||    
T  321792 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

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Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 321868 - 321815
Alignment:
Q  72 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    |||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  321868 ccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgaga 321815  T

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Target: scaffold0886 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 4063 - 4174
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaa 113  Q
    |||| |||||||||| |||||||| |||||||  | |||||| |||||| ||| || ||||||||||||| ||||| |||||| ||||||||  ||||||    
T  4063 cacatattaagaaatggaatgaaacaatcattatacataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaa 4162  T
Q  114 aattgtgtgaga 125  Q
    |||| |||||||    
T  4163 aattatgtgaga 4174  T

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Target: scaffold0886; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 4195 - 4263
Alignment:
Q  135 gagggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    |||| |||||||||||| ||||||||||| || |||| |||||||||| | ||||| ||||| ||||||    
T  4195 gaggataaagttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 13023 - 13247
Alignment:
Q  15 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 114  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| ||| |||          |||||||||||||||||||||||| ||||||||    
T  13023 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagttacattgaaa 13113  T
Q  115 attgtgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttatattggaaatgtaaa-tgacattcattttgaaacaa 202  Q
    ||||||   |||||||| ||  |         ||||||||||||| || ||||||||||| || ||||||||||||||| |||| |||||||| ||||||    
T  13114 attgtgccggagaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaacaa 13213  T
Q  203 annnnnnngactaaagtgacactcattttgaaac 236  Q
            |  |||||||||||||||||||||||    
T  13214 ttttttttggttaaagtgacactcattttgaaac 13247  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 158229 - 158195
Alignment:
Q  83 aagaaaaagacaaaattaaagttgcattgaaaatt 117  Q
    |||||||||||||| ||||||||||||||||||||    
T  158229 aagaaaaagacaaacttaaagttgcattgaaaatt 158195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 7732 - 7765
Alignment:
Q  92 acaaaattaaagttgcattgaaaattgtgtgaga 125  Q
    ||||| ||||||||||||||||||||||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgaga 7765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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