View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6659_low_10 (Length: 270)
Name: NF6659_low_10
Description: NF6659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6659_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 40690329 - 40690591
Alignment:
| Q |
1 |
aacaaacaaatttgtcttgatcatcaacattcaaatctagaaatatatttgttgtaagatattatattcttttgattcattatcaacttgaacaagcacc |
100 |
Q |
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| T |
40690329 |
aacaaacaaatttgtcttgatcatcaacattcaaatctagaaatatatttgttgtaagatattatattcttttgattcattatcaacttgaacaagcacc |
40690428 |
T |
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| Q |
101 |
tgataatttttacaaaattcagttgtttattgaagaannnnnnnnaatttggtctatgaaaaggtctacacaacaactcatgtatagctcatgttgtgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||| | |
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| T |
40690429 |
tgataatttttacaaaattcagttgtttattgaagaatttttttaattttgttctatgaaaaggcctacacaacaactcatgtatagctcatgttgtgta |
40690528 |
T |
|
| Q |
201 |
tctttttcatattaattttttctatttgctctttttattctgtgccaaagaatgtgatgatgt |
263 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
40690529 |
tctttttcatattaattttttctatttgctcttttttttctgtgccaaagaatgtgatgatgt |
40690591 |
T |
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