View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6663_low_7 (Length: 347)

Name: NF6663_low_7
Description: NF6663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6663_low_7
NF6663_low_7
[»] chr1 (12 HSPs)
chr1 (104-235)||(38837975-38838104)
chr1 (265-329)||(2476876-2476940)
chr1 (265-329)||(17679813-17679877)
chr1 (265-329)||(31469583-31469647)
chr1 (265-329)||(45240596-45240660)
chr1 (265-329)||(48386655-48386719)
chr1 (265-329)||(48405780-48405844)
chr1 (265-328)||(47299049-47299112)
chr1 (265-330)||(8469776-8469841)
chr1 (265-329)||(33165826-33165890)
chr1 (265-329)||(51521648-51521712)
chr1 (265-328)||(17784819-17784882)
[»] chr8 (5 HSPs)
chr8 (265-329)||(15055091-15055155)
chr8 (265-329)||(1956770-1956834)
chr8 (265-329)||(13816393-13816457)
chr8 (265-329)||(17743143-17743207)
chr8 (265-329)||(30531097-30531161)
[»] chr7 (5 HSPs)
chr7 (265-329)||(22192665-22192729)
chr7 (265-329)||(36519964-36520028)
chr7 (265-327)||(22658132-22658194)
chr7 (265-329)||(26813593-26813657)
chr7 (265-329)||(32128794-32128858)
[»] chr6 (7 HSPs)
chr6 (265-329)||(632972-633036)
chr6 (265-329)||(6379050-6379114)
chr6 (265-329)||(8220402-8220466)
chr6 (265-329)||(17959811-17959875)
chr6 (265-329)||(34840039-34840103)
chr6 (265-329)||(24931811-24931875)
chr6 (265-329)||(18640861-18640925)
[»] chr5 (5 HSPs)
chr5 (265-329)||(29618149-29618213)
chr5 (265-329)||(32975117-32975181)
chr5 (265-329)||(40890355-40890419)
chr5 (268-329)||(27943953-27944014)
chr5 (265-329)||(9273821-9273885)
[»] chr4 (9 HSPs)
chr4 (265-329)||(2213836-2213900)
chr4 (265-329)||(3531856-3531920)
chr4 (265-329)||(3617001-3617065)
chr4 (265-329)||(8993244-8993308)
chr4 (265-329)||(13112022-13112086)
chr4 (265-329)||(46916063-46916127)
chr4 (265-328)||(16173568-16173631)
chr4 (265-328)||(34436692-34436755)
chr4 (265-326)||(33605591-33605652)
[»] chr3 (14 HSPs)
chr3 (265-329)||(6047243-6047307)
chr3 (265-329)||(17467972-17468036)
chr3 (265-329)||(25789328-25789392)
chr3 (265-329)||(25831285-25831349)
chr3 (265-329)||(30416977-30417041)
chr3 (265-329)||(33189393-33189457)
chr3 (265-329)||(47145623-47145687)
chr3 (265-329)||(30689668-30689732)
chr3 (265-325)||(21230987-21231047)
chr3 (265-329)||(51428548-51428612)
chr3 (265-329)||(21226721-21226785)
chr3 (265-329)||(42562359-42562423)
chr3 (265-326)||(33750137-33750198)
chr3 (282-329)||(50018464-50018511)
[»] chr2 (7 HSPs)
chr2 (265-329)||(7587050-7587114)
chr2 (265-329)||(8853513-8853577)
chr2 (265-329)||(12856475-12856539)
chr2 (265-329)||(22350161-22350225)
chr2 (265-329)||(30821130-30821194)
chr2 (265-329)||(40880286-40880350)
chr2 (266-326)||(31206462-31206522)
[»] scaffold1240 (1 HSPs)
scaffold1240 (265-330)||(1319-1384)
[»] scaffold0007 (1 HSPs)
scaffold0007 (265-326)||(167793-167854)
[»] scaffold0004 (1 HSPs)
scaffold0004 (265-329)||(104299-104363)
[»] scaffold0100 (1 HSPs)
scaffold0100 (265-326)||(29099-29160)


Alignment Details
Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 38838104 - 38837975
Alignment:
Q  104 caggattaagtgcaagccactcggtgtcaaacccaataacctttgtcttatgattggaattacttgttgaaccaaaagaaaaaatatggtcatccaccac 203  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38838104 caggattaggtgcaagccactcggtgtcaaacccaataacctttgtcttatgattggaattacttgttgaaccaaaagaaaaaatatggtcatccaccac 38838005  T
Q  204 attctgcttgtctgtatagtaatggttttgat 235  Q
    ||||||||| ||||  ||||||||||||||||    
T  38838004 attctgcttatctg--tagtaatggttttgat 38837975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 2476940 - 2476876
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  2476940 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 2476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 17679877 - 17679813
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  17679877 gaaacattgcaacatcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 17679813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 31469583 - 31469647
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  31469583 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 31469647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 45240596 - 45240660
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  45240596 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 45240660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 48386719 - 48386655
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  48386719 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 48386655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 48405780 - 48405844
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  48405780 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 48405844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 47299112 - 47299049
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgc 328  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  47299112 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgc 47299049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 8469776 - 8469841
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcca 330  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||||| ||||||||||||||    
T  8469776 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgattctttggtttgcca 8469841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 33165826 - 33165890
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| || |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  33165826 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 33165890  T

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Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 51521648 - 51521712
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||| |||||||| ||||||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  51521648 gaaagattgcatcgtcatatgtaggctcattggaaaagtagtcgtcaattagtctttggtttgcc 51521712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 17784819 - 17784882
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgc 328  Q
    ||||||||||||| || |||||||  ||||||| ||||||||||||||| |||||| |||||||    
T  17784819 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcgtcaattagtcttcggtttgc 17784882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 15055091 - 15055155
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  15055091 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 15055155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 1956834 - 1956770
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||||||||||||  |||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  1956834 gaaacattgcatcgccatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 1956770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 13816393 - 13816457
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  13816393 gaaacattgcatcatcgtatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 13816457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 17743143 - 17743207
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  17743143 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 17743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 30531161 - 30531097
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| || |||||||  ||||||| ||||||||| ||||| |||||||||||||||    
T  30531161 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcatcaattagtctttggtttgcc 30531097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 22192665 - 22192729
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  22192665 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 22192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 36519964 - 36520028
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  36519964 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 36520028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 22658132 - 22658194
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttg 327  Q
    ||||||||| ||| ||||||||||  || |||| |||||||||||||||||||||||||||||    
T  22658132 gaaacattggatcgtcatatgtaggctcgttggcaaagtagtcgtcaatgagtctttggtttg 22658194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 26813593 - 26813657
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||| ||| || |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  26813593 gaaacattgtatcgtcctatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 26813657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 32128858 - 32128794
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||| |||||||  || |||||||  ||||| | ||||||||||||||| |||||||||||||||    
T  32128858 gaaatattgcattgtcgtatgtaggctcattagcaaagtagtcgtcaattagtctttggtttgcc 32128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 632972 - 633036
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  632972 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 633036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 6379114 - 6379050
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  6379114 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 6379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 8220402 - 8220466
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  8220402 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 8220466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 17959875 - 17959811
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  17959875 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 17959811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 34840039 - 34840103
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  34840039 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 34840103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 24931875 - 24931811
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| || ||| |||  ||||||| ||||||||||||||| |||||||||||||||    
T  24931875 gaaacattgcatcgtcgtatttaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 24931811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 18640861 - 18640925
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||| ||| || |||||||  |||||||  |||||||||||||| |||||||||||||||    
T  18640861 gaaacattgaatcgtcgtatgtaggctcattggccaagtagtcgtcaattagtctttggtttgcc 18640925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 29618213 - 29618149
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  29618213 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 29618149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 32975181 - 32975117
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  32975181 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 32975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 40890355 - 40890419
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  40890355 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 40890419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 27943953 - 27944014
Alignment:
Q  268 acattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  27943953 acattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 27944014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 9273885 - 9273821
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||| | |||||||||||||    
T  9273885 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaattattctttggtttgcc 9273821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 2213900 - 2213836
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  2213900 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 2213836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 3531920 - 3531856
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  3531920 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 3531856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 3617065 - 3617001
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  3617065 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 3617001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 8993244 - 8993308
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  8993244 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 8993308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 13112022 - 13112086
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  13112022 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 13112086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 46916127 - 46916063
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  46916127 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcggcaatgagtctttggtttgcc 46916063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 16173631 - 16173568
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgc 328  Q
    ||||||||||||| |||||| |||  ||||||| ||||||||||||||||||||||||||||||    
T  16173631 gaaacattgcatcgtcatatataggctcattggcaaagtagtcgtcaatgagtctttggtttgc 16173568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 34436755 - 34436692
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgc 328  Q
    ||||||||||||| || |||||||  ||||||| ||||||| ||||||| ||||||||||||||    
T  34436755 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagccgtcaattagtctttggtttgc 34436692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 33605591 - 33605652
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggttt 326  Q
    ||||||||||||| || ||||||   ||||||| |||| |||||||||| ||||||||||||    
T  33605591 gaaacattgcatcgtcgtatgtacgctcattggcaaagcagtcgtcaattagtctttggttt 33605652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 6047307 - 6047243
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  6047307 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 6047243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 17467972 - 17468036
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  17467972 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 17468036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 25789392 - 25789328
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  25789392 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 25789328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 25831349 - 25831285
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  25831349 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 25831285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 30417041 - 30416977
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  30417041 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 30416977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 33189457 - 33189393
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  33189457 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 33189393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 47145623 - 47145687
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  47145623 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 47145687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 30689732 - 30689668
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  30689732 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 30689668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 21231047 - 21230987
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtt 325  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||| |||||||||||    
T  21231047 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaattagtctttggtt 21230987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 51428548 - 51428612
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| || |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  51428548 gaaacattgcatcttcgtatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 51428612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 21226721 - 21226785
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  | ||||| ||||||||||| ||| |||||||||||||||    
T  21226721 gaaacattgcatcgtcatatgtaggcttattggcaaagtagtcgttaattagtctttggtttgcc 21226785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 42562359 - 42562423
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| || |||||||  ||||||| ||||||||| |||| ||||||||||||||||    
T  42562359 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcatcaacgagtctttggtttgcc 42562423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 33750137 - 33750198
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggttt 326  Q
    ||||||||||||| || |||||||  ||||||| ||||||||||| ||| ||||||||||||    
T  33750137 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcgttaattagtctttggttt 33750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 50018464 - 50018511
Alignment:
Q  282 tatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  50018464 tatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 50018511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 7587114 - 7587050
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  7587114 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 7587050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 8853513 - 8853577
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  8853513 gaaacattgcatcgtcatatgtaggctcattggtaaagtagtcgtcaatgagtctttggtttgcc 8853577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 12856475 - 12856539
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  12856475 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 12856539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 22350225 - 22350161
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  22350225 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 22350161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 30821194 - 30821130
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  30821194 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaatgagtctttggtttgcc 30821130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 40880350 - 40880286
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  40880350 gaaacattgcatcatcgtatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 40880286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 326
Target Start/End: Complemental strand, 31206522 - 31206462
Alignment:
Q  266 aaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggttt 326  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||||||| ||||||| ||||    
T  31206522 aaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaattagtctttagttt 31206462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1240
Description:

Target: scaffold1240; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 1384 - 1319
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcca 330  Q
    ||||||||||||| || |||||||  ||||||| ||||||||||||||| ||||||||||||||||    
T  1384 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcca 1319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 167854 - 167793
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggttt 326  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||| ||||||||||||    
T  167854 gaaacattgcatcgtcatatgtaggctcattggcaaagtagtcgtcaattagtctttggttt 167793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 104299 - 104363
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggtttgcc 329  Q
    ||||||||||||| || |||||||  ||||||| ||||||||||||||| |||||||||||||||    
T  104299 gaaacattgcatcgtcgtatgtaggctcattggcaaagtagtcgtcaattagtctttggtttgcc 104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 29160 - 29099
Alignment:
Q  265 gaaacattgcatcatcatatgtagaatcattgggaaagtagtcgtcaatgagtctttggttt 326  Q
    ||||||||||||| || |||||||  ||||||| ||| ||||||||||| ||||||||||||    
T  29160 gaaacattgcatcgtcgtatgtaggctcattggcaaattagtcgtcaattagtctttggttt 29099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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