View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6666_low_3 (Length: 469)

Name: NF6666_low_3
Description: NF6666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6666_low_3
NF6666_low_3
[»] chr2 (53 HSPs)
chr2 (122-294)||(37802343-37802515)
chr2 (342-449)||(37802239-37802346)
chr2 (122-256)||(41637616-41637751)
chr2 (122-256)||(30783336-30783471)
chr2 (130-256)||(26687692-26687820)
chr2 (122-256)||(31266352-31266487)
chr2 (122-256)||(29749405-29749540)
chr2 (125-256)||(28319581-28319713)
chr2 (122-256)||(13788057-13788192)
chr2 (122-256)||(21293713-21293848)
chr2 (142-256)||(28841344-28841459)
chr2 (122-248)||(32300449-32300576)
chr2 (130-256)||(37552233-37552360)
chr2 (122-256)||(41736170-41736305)
chr2 (124-256)||(27327616-27327749)
chr2 (129-256)||(43408513-43408641)
chr2 (129-256)||(44476377-44476505)
chr2 (130-256)||(12779606-12779733)
chr2 (122-256)||(22140366-22140501)
chr2 (122-256)||(23388380-23388515)
chr2 (144-250)||(35697475-35697582)
chr2 (132-256)||(14757123-14757248)
chr2 (129-256)||(7093573-7093701)
chr2 (130-249)||(18916410-18916529)
chr2 (122-256)||(32008950-32009086)
chr2 (130-253)||(37723997-37724121)
chr2 (122-248)||(1141534-1141661)
chr2 (122-256)||(8430294-8430429)
chr2 (122-248)||(15636745-15636872)
chr2 (122-256)||(20065076-20065211)
chr2 (130-256)||(23857960-23858086)
chr2 (122-256)||(40018800-40018935)
chr2 (133-248)||(13613103-13613219)
chr2 (121-256)||(44722929-44723065)
chr2 (122-248)||(2556093-2556220)
chr2 (122-256)||(32185830-32185965)
chr2 (132-256)||(36550844-36550968)
chr2 (122-248)||(18551263-18551390)
chr2 (122-255)||(28262362-28262496)
chr2 (122-251)||(44366004-44366134)
chr2 (144-256)||(26243323-26243436)
chr2 (164-256)||(27039910-27040003)
chr2 (129-252)||(8763639-8763763)
chr2 (122-232)||(13134646-13134757)
chr2 (7-50)||(37802587-37802630)
chr2 (122-196)||(27523009-27523083)
chr2 (122-184)||(29998634-29998696)
chr2 (195-256)||(22192251-22192312)
chr2 (129-253)||(38362276-38362401)
chr2 (177-256)||(16098919-16098999)
chr2 (122-256)||(36373898-36374031)
chr2 (122-221)||(9004345-9004445)
chr2 (150-221)||(31966562-31966633)
[»] chr7 (63 HSPs)
chr7 (122-261)||(816188-816328)
chr7 (122-256)||(1907357-1907492)
chr7 (122-256)||(22486396-22486531)
chr7 (122-256)||(24605840-24605975)
chr7 (122-256)||(40847437-40847572)
chr7 (122-254)||(2457672-2457803)
chr7 (129-256)||(4514774-4514902)
chr7 (122-252)||(39979630-39979761)
chr7 (122-256)||(15014407-15014542)
chr7 (122-256)||(21917336-21917471)
chr7 (122-244)||(22501596-22501719)
chr7 (122-256)||(23232041-23232176)
chr7 (122-248)||(31425521-31425648)
chr7 (122-263)||(23750731-23750873)
chr7 (133-248)||(11852021-11852137)
chr7 (122-261)||(18217831-18217971)
chr7 (122-241)||(36636508-36636628)
chr7 (122-256)||(20174022-20174157)
chr7 (122-256)||(47523652-47523787)
chr7 (124-256)||(1842898-1843031)
chr7 (129-256)||(1824202-1824330)
chr7 (129-256)||(3872189-3872317)
chr7 (122-256)||(11036509-11036644)
chr7 (122-256)||(23577191-23577326)
chr7 (122-256)||(27806020-27806155)
chr7 (122-256)||(28800880-28801015)
chr7 (145-254)||(27304895-27305005)
chr7 (122-242)||(31042253-31042374)
chr7 (129-256)||(3904480-3904608)
chr7 (125-256)||(6849213-6849345)
chr7 (122-221)||(10050873-10050973)
chr7 (129-256)||(26577274-26577402)
chr7 (122-256)||(7733314-7733449)
chr7 (130-256)||(20923960-20924087)
chr7 (122-256)||(24140452-24140587)
chr7 (122-256)||(37135287-37135422)
chr7 (123-256)||(32267350-32267483)
chr7 (144-248)||(48933160-48933265)
chr7 (122-256)||(9698540-9698675)
chr7 (122-256)||(20429467-20429602)
chr7 (130-256)||(21623031-21623157)
chr7 (142-256)||(23539254-23539369)
chr7 (122-256)||(27132723-27132858)
chr7 (130-256)||(36993830-36993957)
chr7 (122-256)||(10222632-10222766)
chr7 (124-256)||(25777114-25777247)
chr7 (124-248)||(38057636-38057761)
chr7 (142-256)||(2650830-2650945)
chr7 (132-256)||(15969796-15969922)
chr7 (195-256)||(38090339-38090400)
chr7 (142-256)||(23699827-23699942)
chr7 (122-248)||(26415426-26415553)
chr7 (142-256)||(33427712-33427826)
chr7 (122-221)||(11890184-11890284)
chr7 (122-221)||(45664770-45664870)
chr7 (122-256)||(21871574-21871705)
chr7 (152-256)||(1841785-1841889)
chr7 (129-256)||(2093364-2093492)
chr7 (122-256)||(42926421-42926557)
chr7 (142-248)||(14786645-14786752)
chr7 (124-256)||(27130338-27130469)
chr7 (204-256)||(687951-688003)
chr7 (147-179)||(5235420-5235452)
[»] chr6 (77 HSPs)
chr6 (122-240)||(12845005-12845124)
chr6 (122-256)||(9892965-9893100)
chr6 (122-256)||(12951710-12951845)
chr6 (122-256)||(22083840-22083975)
chr6 (122-256)||(28364913-28365048)
chr6 (122-263)||(495622-495764)
chr6 (122-256)||(9885245-9885380)
chr6 (122-248)||(14886563-14886690)
chr6 (122-256)||(2992617-2992752)
chr6 (142-256)||(5360431-5360546)
chr6 (122-256)||(15364460-15364595)
chr6 (122-256)||(18033528-18033662)
chr6 (122-248)||(22579359-22579486)
chr6 (122-255)||(25398004-25398138)
chr6 (122-256)||(6598466-6598601)
chr6 (122-256)||(12351588-12351723)
chr6 (129-255)||(14872128-14872255)
chr6 (122-256)||(21990177-21990311)
chr6 (122-256)||(24661011-24661146)
chr6 (122-254)||(12157380-12157513)
chr6 (158-252)||(6065475-6065570)
chr6 (129-255)||(11077658-11077785)
chr6 (122-252)||(11530227-11530358)
chr6 (122-248)||(12680195-12680321)
chr6 (122-256)||(18048790-18048925)
chr6 (122-256)||(27796836-27796971)
chr6 (132-256)||(11049753-11049878)
chr6 (122-261)||(21691492-21691633)
chr6 (132-256)||(26224440-26224565)
chr6 (130-256)||(15448395-15448522)
chr6 (122-256)||(20182147-20182282)
chr6 (122-256)||(22153709-22153844)
chr6 (130-256)||(30833962-30834089)
chr6 (143-256)||(1939244-1939358)
chr6 (143-252)||(6978300-6978410)
chr6 (122-256)||(11431641-11431777)
chr6 (122-255)||(21140941-21141075)
chr6 (129-248)||(5192199-5192319)
chr6 (129-256)||(6605498-6605626)
chr6 (122-253)||(12200696-12200828)
chr6 (142-253)||(18492391-18492503)
chr6 (122-256)||(2669311-2669446)
chr6 (125-234)||(23281791-23281901)
chr6 (145-248)||(9060115-9060219)
chr6 (129-248)||(12499225-12499345)
chr6 (129-248)||(12506554-12506674)
chr6 (129-248)||(12509556-12509676)
chr6 (150-248)||(14772691-14772790)
chr6 (142-256)||(16250804-16250919)
chr6 (132-266)||(33250700-33250835)
chr6 (122-256)||(12160849-12160983)
chr6 (123-248)||(12205195-12205321)
chr6 (122-251)||(22055619-22055749)
chr6 (122-219)||(27705424-27705522)
chr6 (132-256)||(26939599-26939724)
chr6 (129-220)||(33547555-33547647)
chr6 (158-256)||(10458802-10458901)
chr6 (122-252)||(16118148-16118279)
chr6 (122-217)||(5270394-5270491)
chr6 (129-255)||(11350191-11350315)
chr6 (129-217)||(13145011-13145100)
chr6 (148-248)||(15509184-15509285)
chr6 (152-256)||(17919568-17919673)
chr6 (152-256)||(28668132-28668237)
chr6 (129-256)||(15961409-15961537)
chr6 (129-254)||(1954890-1955015)
chr6 (198-256)||(8844170-8844228)
chr6 (122-221)||(343600-343700)
chr6 (142-256)||(10929498-10929614)
chr6 (129-248)||(20692821-20692941)
chr6 (126-196)||(2396209-2396279)
chr6 (122-184)||(14036622-14036684)
chr6 (195-252)||(28234061-28234118)
chr6 (134-256)||(30745721-30745842)
chr6 (198-252)||(28221671-28221725)
chr6 (130-182)||(13668071-13668123)
chr6 (158-190)||(19175846-19175878)
[»] chr4 (61 HSPs)
chr4 (122-256)||(1638447-1638582)
chr4 (122-256)||(22128314-22128449)
chr4 (122-255)||(25147721-25147855)
chr4 (125-256)||(19839182-19839314)
chr4 (122-256)||(5399609-5399744)
chr4 (122-256)||(33914059-33914194)
chr4 (129-256)||(4606831-4606959)
chr4 (122-256)||(5473849-5473984)
chr4 (142-256)||(9058954-9059069)
chr4 (130-256)||(29238431-29238558)
chr4 (122-256)||(32175739-32175874)
chr4 (123-256)||(9913259-9913393)
chr4 (129-256)||(38619854-38619982)
chr4 (129-256)||(38645757-38645885)
chr4 (122-256)||(55309214-55309350)
chr4 (130-248)||(8878891-8879010)
chr4 (142-256)||(24682329-24682444)
chr4 (122-256)||(27040027-27040162)
chr4 (122-256)||(46286231-46286366)
chr4 (129-248)||(29625332-29625452)
chr4 (130-256)||(4586760-4586887)
chr4 (122-248)||(18051839-18051966)
chr4 (130-248)||(25026565-25026684)
chr4 (122-256)||(30268990-30269125)
chr4 (122-256)||(30283064-30283199)
chr4 (122-260)||(37378621-37378760)
chr4 (130-256)||(25225107-25225232)
chr4 (129-256)||(9670481-9670609)
chr4 (123-242)||(38223511-38223631)
chr4 (130-256)||(16915377-16915504)
chr4 (122-256)||(22168268-22168403)
chr4 (130-263)||(54539294-54539428)
chr4 (122-242)||(2275694-2275815)
chr4 (144-256)||(18714924-18715037)
chr4 (129-256)||(30507994-30508122)
chr4 (125-248)||(36689680-36689804)
chr4 (130-256)||(4627080-4627207)
chr4 (142-248)||(9238635-9238742)
chr4 (130-256)||(13028818-13028945)
chr4 (122-256)||(13564917-13565052)
chr4 (122-248)||(45532589-45532716)
chr4 (124-256)||(19680426-19680559)
chr4 (124-189)||(37761912-37761977)
chr4 (122-248)||(39234942-39235068)
chr4 (129-256)||(7111948-7112076)
chr4 (129-248)||(12105990-12106109)
chr4 (142-256)||(44783502-44783618)
chr4 (129-242)||(9239297-9239411)
chr4 (152-256)||(42055427-42055532)
chr4 (142-248)||(30568009-30568116)
chr4 (122-196)||(22156664-22156738)
chr4 (133-248)||(3613006-3613123)
chr4 (122-182)||(18744147-18744207)
chr4 (129-256)||(34557190-34557318)
chr4 (122-256)||(30420035-30420170)
chr4 (129-190)||(14944753-14944814)
chr4 (150-221)||(313615-313687)
chr4 (122-248)||(12071962-12072089)
chr4 (130-184)||(45091282-45091336)
chr4 (129-221)||(6553811-6553904)
chr4 (204-256)||(45091344-45091396)
[»] chr3 (87 HSPs)
chr3 (133-256)||(21020074-21020198)
chr3 (122-256)||(19610336-19610471)
chr3 (122-256)||(27449086-27449221)
chr3 (123-248)||(23217218-23217344)
chr3 (129-256)||(15063994-15064122)
chr3 (122-256)||(16299859-16299994)
chr3 (122-256)||(30219336-30219471)
chr3 (122-256)||(36543747-36543882)
chr3 (122-255)||(28389971-28390105)
chr3 (122-262)||(5260935-5261076)
chr3 (129-256)||(5565727-5565855)
chr3 (122-261)||(29215990-29216130)
chr3 (122-256)||(7623533-7623668)
chr3 (122-256)||(19223447-19223582)
chr3 (130-256)||(48404866-48404993)
chr3 (122-255)||(1628213-1628347)
chr3 (123-256)||(46942486-46942620)
chr3 (129-256)||(5744421-5744549)
chr3 (129-256)||(5781380-5781508)
chr3 (129-256)||(13921330-13921458)
chr3 (122-248)||(26830451-26830579)
chr3 (129-256)||(50665638-50665766)
chr3 (122-256)||(11219136-11219271)
chr3 (122-256)||(18104532-18104667)
chr3 (122-248)||(19269874-19270001)
chr3 (129-256)||(21088757-21088883)
chr3 (122-248)||(25882568-25882695)
chr3 (130-261)||(29236050-29236182)
chr3 (122-256)||(1310961-1311096)
chr3 (129-256)||(26098818-26098946)
chr3 (129-256)||(46012730-46012858)
chr3 (122-248)||(4393360-4393487)
chr3 (122-256)||(8110337-8110472)
chr3 (122-256)||(11007685-11007820)
chr3 (122-256)||(11915756-11915891)
chr3 (122-248)||(18091557-18091684)
chr3 (130-256)||(21816727-21816854)
chr3 (130-256)||(27968921-27969048)
chr3 (164-256)||(20761952-20762045)
chr3 (129-256)||(13905040-13905168)
chr3 (129-256)||(21490036-21490164)
chr3 (150-261)||(37283549-37283661)
chr3 (122-256)||(8428169-8428304)
chr3 (122-256)||(9652576-9652711)
chr3 (142-256)||(10941667-10941782)
chr3 (150-256)||(17269606-17269713)
chr3 (122-256)||(17762640-17762775)
chr3 (122-248)||(18539802-18539929)
chr3 (122-256)||(19063960-19064095)
chr3 (122-216)||(27212823-27212918)
chr3 (122-256)||(36564441-36564576)
chr3 (122-256)||(49915449-49915584)
chr3 (129-242)||(28859596-28859710)
chr3 (122-242)||(20615359-20615480)
chr3 (129-261)||(23773482-23773615)
chr3 (129-248)||(1745498-1745617)
chr3 (122-221)||(17582338-17582438)
chr3 (129-256)||(43329765-43329893)
chr3 (142-256)||(11837216-11837331)
chr3 (122-248)||(15490033-15490159)
chr3 (150-256)||(26390636-26390743)
chr3 (122-248)||(29704042-29704169)
chr3 (122-248)||(31433735-31433862)
chr3 (123-256)||(31250087-31250221)
chr3 (144-248)||(8546265-8546370)
chr3 (125-256)||(10803721-10803854)
chr3 (124-256)||(29956372-29956505)
chr3 (124-256)||(30005527-30005660)
chr3 (129-256)||(3461312-3461440)
chr3 (161-256)||(6447248-6447344)
chr3 (122-221)||(19545508-19545608)
chr3 (130-256)||(27182660-27182785)
chr3 (130-256)||(11085344-11085471)
chr3 (130-248)||(29451100-29451219)
chr3 (130-256)||(47263267-47263394)
chr3 (122-189)||(8543467-8543534)
chr3 (118-215)||(20088394-20088492)
chr3 (124-253)||(26963254-26963384)
chr3 (129-191)||(27711236-27711298)
chr3 (129-256)||(6088230-6088358)
chr3 (142-221)||(6718728-6718808)
chr3 (164-247)||(45304374-45304458)
chr3 (122-256)||(18380022-18380157)
chr3 (130-179)||(35579605-35579654)
chr3 (129-221)||(50240751-50240844)
chr3 (129-192)||(23233230-23233293)
chr3 (136-184)||(13615427-13615475)
[»] chr8 (63 HSPs)
chr8 (122-256)||(37992099-37992234)
chr8 (130-248)||(15251610-15251728)
chr8 (122-248)||(3823133-3823260)
chr8 (122-256)||(17824618-17824753)
chr8 (123-256)||(29345072-29345206)
chr8 (122-256)||(8555306-8555441)
chr8 (129-237)||(26399028-26399137)
chr8 (122-256)||(6816385-6816520)
chr8 (122-256)||(17103867-17104002)
chr8 (122-256)||(24576026-24576161)
chr8 (122-256)||(43431561-43431696)
chr8 (132-256)||(27869248-27869373)
chr8 (129-256)||(32247916-32248044)
chr8 (122-256)||(4330978-4331113)
chr8 (122-256)||(19240867-19241002)
chr8 (130-256)||(19256220-19256347)
chr8 (122-256)||(19314051-19314186)
chr8 (144-256)||(16061941-16062054)
chr8 (129-248)||(23752296-23752416)
chr8 (125-248)||(6084256-6084378)
chr8 (130-256)||(11938753-11938879)
chr8 (132-256)||(22939323-22939448)
chr8 (129-256)||(19488063-19488191)
chr8 (129-256)||(30687943-30688071)
chr8 (158-256)||(8789876-8789975)
chr8 (122-256)||(17810298-17810433)
chr8 (122-256)||(21350478-21350613)
chr8 (142-256)||(24193198-24193313)
chr8 (142-256)||(25655860-25655975)
chr8 (142-256)||(27910766-27910881)
chr8 (142-256)||(27957185-27957300)
chr8 (130-256)||(30466956-30467083)
chr8 (122-248)||(33652567-33652694)
chr8 (144-256)||(10917849-10917962)
chr8 (129-256)||(13060933-13061061)
chr8 (142-248)||(18010070-18010177)
chr8 (122-256)||(18844546-18844681)
chr8 (122-256)||(40289423-40289557)
chr8 (152-256)||(8824855-8824960)
chr8 (130-233)||(5670194-5670298)
chr8 (130-245)||(24636660-24636776)
chr8 (129-256)||(25273330-25273457)
chr8 (142-256)||(4647757-4647872)
chr8 (122-256)||(6817054-6817189)
chr8 (122-256)||(9915043-9915177)
chr8 (130-256)||(25000433-25000560)
chr8 (125-256)||(9631406-9631539)
chr8 (120-256)||(17003260-17003397)
chr8 (122-256)||(29350923-29351059)
chr8 (129-256)||(31399510-31399638)
chr8 (142-256)||(21219242-21219357)
chr8 (122-256)||(31344174-31344309)
chr8 (122-248)||(32961659-32961786)
chr8 (152-221)||(19493692-19493762)
chr8 (122-219)||(5879204-5879302)
chr8 (159-220)||(15289679-15289741)
chr8 (159-220)||(15470048-15470110)
chr8 (179-256)||(25274654-25274732)
chr8 (163-254)||(2265383-2265474)
chr8 (132-183)||(24479874-24479925)
chr8 (142-184)||(33413045-33413087)
chr8 (195-248)||(24479823-24479876)
chr8 (203-248)||(35678069-35678114)
[»] chr5 (60 HSPs)
chr5 (122-248)||(27428022-27428149)
chr5 (129-256)||(25397790-25397918)
chr5 (130-256)||(23423758-23423885)
chr5 (122-256)||(33818563-33818698)
chr5 (122-265)||(7888799-7888944)
chr5 (122-256)||(16121841-16121976)
chr5 (122-256)||(17039633-17039768)
chr5 (122-256)||(20959510-20959645)
chr5 (122-243)||(10420267-10420389)
chr5 (129-248)||(746878-746998)
chr5 (122-248)||(618296-618423)
chr5 (122-248)||(11927796-11927923)
chr5 (130-256)||(13620129-13620256)
chr5 (130-248)||(24138851-24138970)
chr5 (122-256)||(25673231-25673365)
chr5 (144-256)||(33734975-33735088)
chr5 (129-256)||(38837673-38837801)
chr5 (122-252)||(3080702-3080833)
chr5 (122-256)||(8886853-8886988)
chr5 (122-256)||(12045729-12045864)
chr5 (122-248)||(23975637-23975764)
chr5 (122-256)||(36196396-36196531)
chr5 (132-256)||(2472716-2472841)
chr5 (132-248)||(35620354-35620470)
chr5 (129-256)||(10494746-10494874)
chr5 (129-256)||(16631876-16632004)
chr5 (130-256)||(26708587-26708714)
chr5 (130-256)||(26978321-26978448)
chr5 (131-256)||(17036414-17036540)
chr5 (129-256)||(4125190-4125318)
chr5 (122-256)||(7003732-7003865)
chr5 (130-249)||(32726735-32726855)
chr5 (129-256)||(40484053-40484181)
chr5 (142-256)||(8108862-8108977)
chr5 (122-256)||(12328228-12328363)
chr5 (122-248)||(15060975-15061102)
chr5 (122-248)||(20187951-20188078)
chr5 (122-256)||(36716202-36716337)
chr5 (124-256)||(5982649-5982783)
chr5 (124-256)||(28265477-28265610)
chr5 (122-256)||(23408982-23409118)
chr5 (153-256)||(23974578-23974682)
chr5 (122-220)||(17079407-17079506)
chr5 (129-255)||(35778150-35778277)
chr5 (122-256)||(36831892-36832027)
chr5 (123-248)||(25652593-25652719)
chr5 (129-256)||(17771970-17772098)
chr5 (129-256)||(36597342-36597470)
chr5 (122-230)||(33816786-33816895)
chr5 (122-253)||(17986731-17986863)
chr5 (122-256)||(13974080-13974215)
chr5 (135-215)||(31853131-31853212)
chr5 (130-256)||(16472183-16472310)
chr5 (130-182)||(22649406-22649458)
chr5 (213-256)||(16464723-16464766)
chr5 (122-177)||(29727928-29727983)
chr5 (122-215)||(18413558-18413652)
chr5 (136-182)||(26301919-26301965)
chr5 (129-162)||(19345284-19345317)
chr5 (122-178)||(31158634-31158690)
[»] chr1 (73 HSPs)
chr1 (122-256)||(7830033-7830168)
chr1 (122-256)||(18894902-18895037)
chr1 (122-256)||(50845332-50845467)
chr1 (122-263)||(12720811-12720953)
chr1 (122-256)||(38531172-38531307)
chr1 (122-261)||(12989854-12989994)
chr1 (122-261)||(29549420-29549560)
chr1 (122-256)||(14760869-14761004)
chr1 (122-256)||(41752435-41752570)
chr1 (122-256)||(52183680-52183815)
chr1 (122-254)||(16258490-16258623)
chr1 (122-254)||(16913581-16913714)
chr1 (122-256)||(6459219-6459354)
chr1 (122-256)||(9109977-9110112)
chr1 (122-256)||(13102318-13102453)
chr1 (122-248)||(19081730-19081857)
chr1 (122-248)||(19129618-19129745)
chr1 (122-256)||(22603550-22603685)
chr1 (122-256)||(41063199-41063334)
chr1 (122-256)||(45839294-45839429)
chr1 (130-248)||(46785968-46786087)
chr1 (122-251)||(30928385-30928515)
chr1 (122-242)||(22789607-22789728)
chr1 (122-217)||(13523002-13523098)
chr1 (129-256)||(19865253-19865381)
chr1 (129-256)||(28229457-28229585)
chr1 (129-256)||(46790009-46790137)
chr1 (130-248)||(4340417-4340536)
chr1 (122-256)||(20408162-20408297)
chr1 (122-256)||(46865245-46865380)
chr1 (122-208)||(14486683-14486769)
chr1 (159-256)||(27253857-27253955)
chr1 (130-266)||(41120729-41120866)
chr1 (122-261)||(12161816-12161956)
chr1 (129-256)||(39748942-39749070)
chr1 (122-233)||(41071860-41071972)
chr1 (122-256)||(6412055-6412190)
chr1 (122-256)||(9259185-9259320)
chr1 (122-248)||(9464105-9464232)
chr1 (122-256)||(15243087-15243222)
chr1 (122-256)||(23457899-23458034)
chr1 (142-256)||(46339447-46339562)
chr1 (129-256)||(8940996-8941124)
chr1 (133-252)||(11917799-11917918)
chr1 (122-256)||(17733955-17734091)
chr1 (142-256)||(7181557-7181672)
chr1 (122-256)||(9985329-9985464)
chr1 (122-248)||(22158804-22158931)
chr1 (142-256)||(48522540-48522655)
chr1 (151-256)||(25787999-25788105)
chr1 (133-253)||(26825253-26825374)
chr1 (124-256)||(51973428-51973561)
chr1 (122-248)||(18787923-18788047)
chr1 (158-248)||(6775925-6776015)
chr1 (144-261)||(12806833-12806952)
chr1 (122-248)||(17661052-17661179)
chr1 (122-248)||(18890559-18890686)
chr1 (144-256)||(13308822-13308935)
chr1 (130-256)||(9177110-9177237)
chr1 (122-256)||(29093556-29093691)
chr1 (142-256)||(50092300-50092415)
chr1 (119-216)||(12174808-12174906)
chr1 (123-256)||(13195586-13195720)
chr1 (163-256)||(17200012-17200106)
chr1 (152-221)||(41359020-41359090)
chr1 (133-248)||(20580922-20581039)
chr1 (122-221)||(32046878-32046978)
chr1 (122-196)||(12370004-12370078)
chr1 (143-182)||(20290397-20290436)
chr1 (129-252)||(49881053-49881176)
chr1 (152-253)||(45918909-45919011)
chr1 (210-256)||(12369953-12369999)
chr1 (130-184)||(25687355-25687409)
[»] scaffold0047 (1 HSPs)
scaffold0047 (122-256)||(58584-58719)
[»] scaffold0069 (1 HSPs)
scaffold0069 (122-253)||(10160-10292)
[»] scaffold0576 (1 HSPs)
scaffold0576 (122-256)||(9231-9366)
[»] scaffold0076 (1 HSPs)
scaffold0076 (122-256)||(26485-26620)
[»] scaffold0058 (1 HSPs)
scaffold0058 (122-256)||(74543-74678)
[»] scaffold0007 (4 HSPs)
scaffold0007 (122-256)||(202776-202911)
scaffold0007 (124-256)||(3746-3879)
scaffold0007 (122-184)||(276209-276271)
scaffold0007 (204-256)||(274667-274719)
[»] scaffold0001 (3 HSPs)
scaffold0001 (122-253)||(8115-8247)
scaffold0001 (122-253)||(21847-21979)
scaffold0001 (122-256)||(84305-84440)
[»] scaffold0603 (1 HSPs)
scaffold0603 (122-256)||(5981-6116)
[»] scaffold0219 (1 HSPs)
scaffold0219 (122-256)||(19605-19740)
[»] scaffold0006 (2 HSPs)
scaffold0006 (119-248)||(120997-121127)
scaffold0006 (129-254)||(84678-84804)
[»] scaffold0717 (1 HSPs)
scaffold0717 (122-256)||(920-1056)
[»] scaffold0599 (1 HSPs)
scaffold0599 (122-256)||(7507-7642)
[»] scaffold0014 (1 HSPs)
scaffold0014 (130-256)||(22221-22348)
[»] scaffold0009 (2 HSPs)
scaffold0009 (152-256)||(182562-182667)
scaffold0009 (132-256)||(219648-219773)
[»] scaffold0128 (1 HSPs)
scaffold0128 (130-253)||(10668-10792)
[»] scaffold0062 (1 HSPs)
scaffold0062 (117-256)||(43914-44054)
[»] scaffold0240 (1 HSPs)
scaffold0240 (130-256)||(14992-15119)
[»] scaffold0108 (1 HSPs)
scaffold0108 (122-248)||(12655-12781)
[»] scaffold0087 (1 HSPs)
scaffold0087 (122-256)||(37789-37924)
[»] scaffold0023 (1 HSPs)
scaffold0023 (142-256)||(39705-39820)
[»] scaffold0019 (1 HSPs)
scaffold0019 (132-248)||(173456-173574)
[»] scaffold0035 (1 HSPs)
scaffold0035 (144-255)||(74720-74832)
[»] scaffold0655 (1 HSPs)
scaffold0655 (123-248)||(3172-3296)
[»] scaffold0502 (1 HSPs)
scaffold0502 (122-252)||(10894-11025)
[»] scaffold0161 (1 HSPs)
scaffold0161 (130-255)||(6805-6931)
[»] scaffold0024 (1 HSPs)
scaffold0024 (122-190)||(112330-112398)
[»] scaffold0184 (1 HSPs)
scaffold0184 (124-255)||(7460-7592)
[»] scaffold0211 (1 HSPs)
scaffold0211 (129-228)||(19168-19268)
[»] scaffold0002 (1 HSPs)
scaffold0002 (129-256)||(439972-440100)
[»] scaffold0011 (1 HSPs)
scaffold0011 (171-256)||(17619-17705)
[»] scaffold0038 (2 HSPs)
scaffold0038 (195-252)||(34222-34279)
scaffold0038 (198-252)||(22169-22223)
[»] scaffold0554 (1 HSPs)
scaffold0554 (195-256)||(9886-9947)
[»] scaffold0284 (1 HSPs)
scaffold0284 (129-221)||(1556-1649)


Alignment Details
Target: chr2 (Bit Score: 133; Significance: 6e-69; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 37802515 - 37802343
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtca 221  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  37802515 agtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaaaaattgcgagagattttattttttccgtca 37802416  T
Q  222 tcaatttccctccctaattttgcttttcctagtagggaatatatagatctaagtcaatttaattttgcaataa 294  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  37802415 tcaatttctctccctaattttgcttttcctagtagtgaatatataaatctaagtcaatttaattttgcaataa 37802343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 342 - 449
Target Start/End: Complemental strand, 37802346 - 37802239
Alignment:
Q  342 ataacggtcattgaaaacttacacacatagatgaagaagttgagttcaaacttcaaatacgacattcgagctagcaatttccgtgttttaccatttaaac 441  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37802346 ataacagtcattgaaaacttacacacatagatgaagaagttgagttcaaacttcaaatacgacatttgagctagcaatttccgtgttttaccatttaaac 37802247  T
Q  442 taagattt 449  Q
    ||||||||    
T  37802246 taagattt 37802239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 41637616 - 41637751
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  41637616 agtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 41637715  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||||||||||||||| |||||||    
T  41637716 acaaatttccctccctaattttgctttttctagtag 41637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 30783336 - 30783471
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  30783336 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccgtc 30783435  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||| |||||||||||||||||||||||    
T  30783436 acaaatttcccttcctaattttgcttttcctagtag 30783471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 26687820 - 26687692
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgtcatcaatt 227  Q
    |||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||| ||||    
T  26687820 aaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttccgtcattaatt 26687721  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||| ||||||||||||  |||||||    
T  26687720 tccctccttaattttgctttatctagtag 26687692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 31266352 - 31266487
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| ||||||||     
T  31266352 agtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgta 31266451  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||||||||| |||||||||||||    
T  31266452 aaaaatttccctccctaattttacttttcctagtag 31266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 29749540 - 29749405
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| ||||||| ||| ||||||||||||||||||||||| ||||| | | |||||||  ||||||| |||||||||    
T  29749540 agtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtc 29749441  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||| ||||||||||||||| |||||||    
T  29749440 acaaatttcccttcctaattttgctttttctagtag 29749405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 28319713 - 28319581
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatc 223  Q
    |||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| |||||||||||||      
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  224 aatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||| |||||||||||||| |||||||    
T  28319613 aatttccctcactaattttgctttttctagtag 28319581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 13788192 - 13788057
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || |||||| || ||||| |||||||||| |||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  13788192 agtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 13788093  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   ||||||||| |||||||||||||| |||||||    
T  13788092 actgatttccctcgctaattttgctttttctagtag 13788057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 21293848 - 21293713
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||| | ||||  ||| |||||||| |||| ||||||||||||    
T  21293848 agtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccgtc 21293749  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  21293748 actaatttccctcgctaattttgttttttctagtag 21293713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 28841459 - 28841344
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||| |  |||||||||| ||||||    
T  28841459 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgttactaatttccctcgctaatt 28841360  T
Q  241 ttgcttttcctagtag 256  Q
    ||||||||||||||||    
T  28841359 ttgcttttcctagtag 28841344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 32300449 - 32300576
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  32300449 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtc 32300548  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  32300549 actaatttccctcgctaattttgctttt 32300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 37552233 - 37552360
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || |||||| || ||||| |||||||||||||||| |||||||||| ||||||||| |||||||  |||| |||||||||||||  |||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  37552333 ccctcgctaattttgctttttctagtag 37552360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 41736170 - 41736305
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || |||||| || ||||| |||||||||| |||||||||||||||| | ||| ||| |||||||  |||| ||||||||||||    
T  41736170 agtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtc 41736269  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  41736270 actaatttccctcgctaattttgctttttctagtag 41736305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 27327616 - 27327749
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcat 222  Q
    ||||| |||||||| || ||||||| ||||||| |||| ||||||||||||||||||||||  | || ||||| |||||  ||||||| ||||||||||     
T  27327616 tgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcac 27327715  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     ||||||| |||||||||||||||||||||||||    
T  27327716 aaatttccatccctaattttgcttttcctagtag 27327749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 43408641 - 43408513
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||||||||  ||||    
T  43408641 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 43408542  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  43408541 tccctcactaattttgctttttctagtag 43408513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 44476505 - 44476377
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| ||||||   |||| |||||||||||||  ||||    
T  44476505 aaaaattagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatt 44476406  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  44476405 tccctcgctaattttgctttttctagtag 44476377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 12779606 - 12779733
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||  |||||||||| |||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  12779706 ccctcgctaattttgctttttctagtag 12779733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 22140501 - 22140366
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | ||  |||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  22140501 agtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtc 22140402  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||  ||||||||||||| |||||||    
T  22140401 actaatttccctcgttaattttgctttttctagtag 22140366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 23388515 - 23388380
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | ||||||   |||| ||||||||||||    
T  23388515 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccgtc 23388416  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    | ||||||||||| ||||||||| |||| |||||||    
T  23388415 accaatttccctcgctaattttgttttttctagtag 23388380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 35697475 - 35697582
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||| ||||||  ||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||     
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaatttc 35697574  T
Q  243 gcttttcc 250  Q
     |||||||    
T  35697575 acttttcc 35697582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 14757248 - 14757123
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||||||||| ||||| |    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttc 14757149  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
     || |||||||||||||| |||||||    
T  14757148 ttcgctaattttgctttttctagtag 14757123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 7093573 - 7093701
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||  ||||||||||||||| |||||| |||| |||||  |||| |||||||||||||  ||||    
T  7093573 aaaaattagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatt 7093672  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  7093673 tccctcgctaattttgcttttactagtag 7093701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 18916529 - 18916410
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||||||||||||||| | |||| || ||||||| ||||||| |||||||||||  |||||    
T  18916529 aaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggatttta-tttttccgtcagtaattt 18916431  T
Q  229 ccctccctaattttgcttttc 249  Q
    |||| ||||||||||||||||    
T  18916430 ccctgcctaattttgcttttc 18916410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 32008950 - 32009086
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgt 219  Q
    ||||||| |||||||  || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| | ||||||||||    
T  32008950 agtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgt 32009049  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  ||||| |||| |||||||||||||| |||||||    
T  32009050 cactaattttcctcgctaattttgctttttctagtag 32009086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 37724121 - 37723997
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||| |||||||  |||| |||||||||||||  |||||    
T  37724121 aaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37724022  T
Q  229 ccctccctaattttgcttttcctag 253  Q
    ||||| || ||||| ||||| ||||    
T  37724021 ccctcgctgatttttctttttctag 37723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 1141534 - 1141661
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||| ||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  1141534 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 1141633  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  1141634 actaatttccctcgctaattttgctttt 1141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 8430294 - 8430429
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||| | | || || | |||||||  |||||||||||||||||    
T  8430294 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccgtc 8430393  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||| | ||||||||| |||| |||||||    
T  8430394 actaatttcccccgctaattttgttttttctagtag 8430429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 15636872 - 15636745
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| |||||||||| |||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  15636872 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 15636773  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  15636772 actaatttccctcgctaattttgctttt 15636745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 20065211 - 20065076
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || | ||||||||||||| ||||||||||| ||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  20065211 agtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 20065112  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  20065111 actaatttccctcgctaattttgctttttctagtag 20065076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 23858086 - 23857960
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| |||||| |||||||||||||||||||||||||| ||||| ||| ||||||| || |||  |||| ||||||  |||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttcattttcccgtcactaattt 23857988  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  23857987 ccctcgctaattttgctttttctagtag 23857960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 40018800 - 40018935
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||| |||||||||| || ||||||| ||||||| |||||||||||  ||||| |||||||||||||| ||| |||| ||| |||||||||||||||||    
T  40018800 agtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtc 40018899  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||   |||||||| |||| |||||||    
T  40018900 actaatttccctttttaattttgttttttctagtag 40018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 13613219 - 13613103
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccc 231  Q
    ||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||| |||||  ||||| ||    
T  13613219 tttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcc 13613120  T
Q  232 tccctaattttgctttt 248  Q
    || |||||||| |||||    
T  13613119 tcgctaatttttctttt 13613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 256
Target Start/End: Original strand, 44722929 - 44723065
Alignment:
Q  121 cagtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgt 219  Q
    |||||||| | |||||| ||  |||||  ||||||| ||||||||||||||||||||||||||| || || ||||| || ||  |||| ||||||||| |    
T  44722929 cagtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccat 44723028  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||| |||||||||| |||||||||||||| |||||||    
T  44723029 cattaatttccctcgctaattttgctttttctagtag 44723065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 2556093 - 2556220
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| |||||| |||||||   |||||||||||||||||||||||| ||||||| | | |||||||| |||||||||||||| ||    
T  2556093 agtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatc 2556192  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||| |||| |||||||| |||||    
T  2556193 actaattttcctctctaattttactttt 2556220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 32185830 - 32185965
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||| | ||||  | | ||| |||  |||| ||||||||||||    
T  32185830 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccgtc 32185929  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  32185930 actaatttccctcgctaattttgttttttctagtag 32185965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 36550844 - 36550968
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| |||| ||||||| |||||||||||||| |||||| || ||||||| || |||||||||||| |||  |||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgaggga-tttattttttccatcactaatttcc 36550942  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
    ||| ||||||||| |||| |||||||    
T  36550943 ctctctaattttgttttttctagtag 36550968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 18551390 - 18551263
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| | ||||| ||||||||||||||||||||||||||| |  || ||| |||||||  |||| ||||||||||||    
T  18551390 agtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccgtc 18551291  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||| |||| ||||||||||||||    
T  18551290 actaattttcctcgctaattttgctttt 18551263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 28262362 - 28262496
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||  ||||  | | |||||||  |||| ||||||||| ||    
T  28262362 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccatc 28262461  T
Q  221 atcaatttccctccctaattttgcttttcctagta 255  Q
    |  |||||||||  |||||||| ||||| ||||||    
T  28262462 actaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 44366134 - 44366004
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| || ||||| || | ||||| ||||||| |||||||||||| ||| | |||||||  ||||| ||||| |||||  ||||||||||||| |||    
T  44366134 agtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtc 44366035  T
Q  221 atcaatttccctccctaattttgcttttcct 251  Q
    || |||||||||| ||||||||| |||||||    
T  44366034 attaatttccctctctaattttgtttttcct 44366004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 26243436 - 26243323
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||||| ||||  ||||||||||||||||||||||||| | ||||| ||| |||||||  ||||||||||| ||| ||  ||||||||||  |||||||    
T  26243436 aaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccctcgttaatttt 26243337  T
Q  243 gcttttcctagtag 256  Q
    |||||| |||||||    
T  26243336 gctttttctagtag 26243323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 27040003 - 27039910
Alignment:
Q  164 aattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||||||||||| |||||  |||| |||||  |||| |||||||||||||  |||||||||| |||||||||||||| |||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtag 27039910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 8763639 - 8763763
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||| || ||||||| |||||||  ||||||||||||||| ||||||||   | ||| ||| ||||| |||||||||||||||||||||  || |    
T  8763639 aaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaact 8763738  T
Q  228 tccctccctaattttgcttttccta 252  Q
    |  |||||||||||||||| |||||    
T  8763739 tttctccctaattttgcttgtccta 8763763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 13134757 - 13134646
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaac-caaagaattgtgagagattttattttttccgtc 220  Q
    |||||| |||||||||||| ||||||| ||||||| || |||||||  |||| |||||||| | ||  ||| ||||||||| ||||||||||||||||||    
T  13134757 agtgagaaaaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtc 13134658  T
Q  221 atcaatttccct 232  Q
    |  |||||||||    
T  13134657 actaatttccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 37802630 - 37802587
Alignment:
Q  7 gtgagatgaattgcaactcagaagaagaatgatagtgtttgtag 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37802630 gtgagatgaattgcaactcagaagaagaatgatagtgtttgtag 37802587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 27523009 - 27523083
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt 196  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  27523009 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatt 27523083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 29998696 - 29998634
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    ||||||| || |||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  29998696 agtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgc 29998634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 22192251 - 22192312
Alignment:
Q  195 ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||||  |||||| |||||| ||||||||||| |||||||    
T  22192251 ttgtgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtag 22192312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 38362401 - 38362276
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| |||||  | |||||||| |||||| |||||| | ||||||||||| |||||  |||| |||||||||||||  ||||    
T  38362401 aaaaattagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 38362302  T
Q  228 tccctccctaattttgcttttcctag 253  Q
    |||||  |||||||||||||| ||||    
T  38362301 tcccttactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 16098999 - 16098919
Alignment:
Q  177 aattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||| ||| ||||||||||||| |||||||| || |  |||||||||||||||||||| |||| |||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtag 16098919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 36373898 - 36374031
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || |||||| |||||||    ||||||||| ||||||||||||| | | ||| ||| ||| ||| ||||||||||||||||||    
T  36373898 agtgaggaaaatttagtgagggaaaatgtgaaat--tcctctaattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccgtc 36373995  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
       || ||  ||||||||||||| ||||||||||||    
T  36373996 gctaaatttactccctaattttgtttttcctagtag 36374031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 9004445 - 9004345
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||  |||||||||||| ||||||||||||| ||| || ||| || ||||| |||| |||| |||||||    
T  9004445 agtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccgtc 9004346  T
Q  221 a 221  Q
    |    
T  9004345 a 9004345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 31966633 - 31966562
Alignment:
Q  150 tgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtca 221  Q
    ||||||| ||||||||||  || |||||||||||| ||||| |||||   || |||||||||||||||||||    
T  31966633 tgaaatctctctctaattatgttactaaattttgcgaccaaggaatttatagggattttattttttccgtca 31966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 816328 - 816188
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  816328 agtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtc 816229  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    |  ||||||||||||||| |||| |||| | ||||| ||||    
T  816228 actaatttccctccctaaatttgttttttccagtagtgaat 816188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 1907357 - 1907492
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    |||||||||||| ||| || ||||||| ||||||| |||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  1907357 agtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtc 1907456  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||||||||||||||||    
T  1907457 actaatttccctcgctaattttgcttttcctagtag 1907492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 22486396 - 22486531
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  22486396 agtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 22486495  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  22486496 actaatttccctcgctaattttgctttttctagtag 22486531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 24605840 - 24605975
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  24605840 agtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 24605939  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| || ||||| ||||| |||||||    
T  24605940 actaatttccctcgctgatttttctttttctagtag 24605975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 40847572 - 40847437
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||   ||||||| |||||||||    
T  40847572 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtc 40847473  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||||||||| |||||||||||||    
T  40847472 acaaatttccctccctaattttacttttcctagtag 40847437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 122 - 254
Target Start/End: Original strand, 2457672 - 2457803
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtca 221  Q
    |||||||||||||| | || ||||||| ||||||| ||||| ||||||||||||||||||||| || |||||||| || |||||||||| ||||| ||||    
T  2457672 agtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatt-tgtgagattttatattttctgtca 2457770  T
Q  222 tcaatttccctccctaattttgcttttcctagt 254  Q
      |||||||||||||||||||||||||||||||    
T  2457771 ctaatttccctccctaattttgcttttcctagt 2457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 4514774 - 4514902
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||  ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||| ||||||| ||||||||||  ||||    
T  4514774 aaaaattagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatt 4514873  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||||||    
T  4514874 tccctccctaattttgcttttcctagtag 4514902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 39979761 - 39979630
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| |||||||||||||||| |||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  39979761 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 39979662  T
Q  221 atcaatttccctccctaattttgcttttccta 252  Q
    |  |||||||||||||||||||||||||||||    
T  39979661 acaaatttccctccctaattttgcttttccta 39979630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 15014542 - 15014407
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| || || ||| |||||||  |||||||||||||||||    
T  15014542 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtc 15014443  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    | ||||||||||| |||||||| ||||| |||||||    
T  15014442 accaatttccctcgctaattttactttttctagtag 15014407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 21917471 - 21917336
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  21917471 agtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 21917372  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  21917371 actaatttccctcactaattttgctttttctagtag 21917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 244
Target Start/End: Original strand, 22501596 - 22501719
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||  |||||||| |||||| |||||||||||||||||||    
T  22501596 agtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccgtc 22501695  T
Q  221 atcaatttccctccctaattttgc 244  Q
    |  ||||| | ||| |||||||||    
T  22501696 actaattttcatccttaattttgc 22501719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 23232041 - 23232176
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| || |||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  23232041 agtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 23232140  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  23232141 actaatttccctctctaattttgctttttctagtag 23232176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 31425648 - 31425521
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| |||| |||| |||||||  |||| ||||||||||||    
T  31425648 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccgtc 31425549  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  31425548 actaatttccctcgctaattttgctttt 31425521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 23750873 - 23750731
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||| ||||||||||||||||||||||||| | ||||| ||| |||||||| |||| ||||||||||||    
T  23750873 agtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccgtc 23750774  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaatat 263  Q
    |  |||||||||| ||||||||| |||| ||||||| ||||||    
T  23750773 actaatttccctcgctaattttgttttttctagtagtgaatat 23750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 11852021 - 11852137
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccc 231  Q
    |||||||| ||||||| |||||||  |||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| ||||  |||||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  232 tccctaattttgctttt 248  Q
    |||||||||||||||||    
T  11852121 tccctaattttgctttt 11852137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 18217831 - 18217971
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || | ||||||| ||||| |||||||||| |||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  18217831 agtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 18217930  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    |  |||||||||| |||||||||||||| ||||||| ||||    
T  18217931 actaatttccctcgctaattttgctttttctagtagtgaat 18217971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 36636508 - 36636628
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  36636508 agtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 36636607  T
Q  221 atcaatttccctccctaattt 241  Q
    |  ||||||||||||||||||    
T  36636608 acaaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 20174022 - 20174157
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  20174022 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 20174121  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||||||||||| ||||    
T  20174122 actaatttccctcgctaattttgcttttcctggtag 20174157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 47523787 - 47523652
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  47523787 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 47523688  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||  |||| |||||||    
T  47523687 actaatttccctcgctaattttattttttctagtag 47523652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 1842898 - 1843031
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| |||||||| || ||||||||| ||||| ||| ||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||     
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 1842997  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     ||||||||||  ||||||||||||| |||||||    
T  1842998 taatttccctcgttaattttgctttttctagtag 1843031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 1824330 - 1824202
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||  ||||||  ||||||||||||||||||||||||||| |||||  |||| |||||  ||||||| ||||||||||  ||||    
T  1824330 aaaaattagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatt 1824231  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||||||    
T  1824230 tccctccctaattttgcttttcctagtag 1824202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 3872317 - 3872189
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  3872317 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatt 3872218  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  3872217 tccctcgctaattttgctttttctagtag 3872189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 11036509 - 11036644
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  11036509 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 11036608  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  |||||||||||||| |||||||    
T  11036609 actaatttcccttgctaattttgctttttctagtag 11036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 23577326 - 23577191
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||||||||| || |||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  23577326 agtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 23577227  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||| ||| || ||||| ||||| |||||||    
T  23577226 actaatttctctcgctgatttttctttttctagtag 23577191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 27806020 - 27806155
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||| | ||||| ||| |||||||  |||| ||||||||||||    
T  27806020 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtc 27806119  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| |||||||||||||| |||||||    
T  27806120 actaattttcctcgctaattttgctttttctagtag 27806155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 28800880 - 28801015
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||| |||    
T  28800880 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctgtc 28800979  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  28800980 actaatttccctcgctaattttgctttttctagtag 28801015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 27304895 - 27305005
Alignment:
Q  145 aaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttg 243  Q
    |||||||| ||| |||||||||||||||||||||||||||  |||| ||||| ||| | |||||||||||||| ||||  ||||||||||||||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T
Q  244 cttttcctagt 254  Q
     ||||||||||    
T  27304995 tttttcctagt 27305005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 31042253 - 31042374
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||| |||||||| |||||||||||||| |     
T  31042253 agtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttccata 31042352  T
Q  221 atcaatttccctccctaatttt 242  Q
    |  ||||| |||| ||||||||    
T  31042353 actaattttcctctctaatttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 3904608 - 3904480
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | ||| |||  |||| |||||||||||||  ||||    
T  3904608 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatt 3904509  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  3904508 tccctcgctaattttgctttttctagtag 3904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 6849345 - 6849213
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatc 223  Q
    |||| |||||||| || | ||||||| ||||| ||||||||||||||||||||||||||| || || ||| |||||||  |||| ||||| |||||||      
T  6849345 gagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcact 6849246  T
Q  224 aatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||| |||||||||||||| |||||||    
T  6849245 aatttccctcgctaattttgctttttctagtag 6849213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 10050973 - 10050873
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||| |||| ||||||||||||    
T  10050973 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtc 10050874  T
Q  221 a 221  Q
    |    
T  10050873 a 10050873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 26577274 - 26577402
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||| ||||||||||||||||| ||||| ||| |||||||  ||||||| ||||||||||  | ||    
T  26577274 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtt 26577373  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||| ||||||||||||||||| |||||    
T  26577374 tcccttcctaattttgcttttcccagtag 26577402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 7733449 - 7733314
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || | ||||| ||||||| ||||||||||||||| ||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  7733449 agtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 7733350  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||| |||||| |||||||    
T  7733349 actaatttccctcgctaatttcgctttttctagtag 7733314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 20924087 - 20923960
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||||||||||||||  |||||  |||| || |||||||||||||||||| |||  |||||    
T  20924087 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaattt 20923988  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    |||||| ||||||| ||||| |||||||    
T  20923987 ccctccataattttactttttctagtag 20923960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 24140452 - 24140587
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| | |||||  |||| |||||||||| |||||||| | ||||||||||| |||||  ||||||| |||||||||    
T  24140452 agtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccgtc 24140551  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||||||||||||| |||||||||||||    
T  24140552 acaaattttcctccctaattttacttttcctagtag 24140587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 37135422 - 37135287
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||| | ||||  ||| || ||||  |||| ||||||||||||    
T  37135422 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccgtc 37135323  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  37135322 actaatttccctcactaattttgttttttctagtag 37135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 32267350 - 32267483
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||| ||||||||  ||||| ||||||||||| ||||||||||||||| | ||| | | ||||||| ||||||| |||||||||||    
T  32267350 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatttta-tttttccgtca 32267448  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||| ||||||||||||||||| ||| |||||||    
T  32267449 ctaatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 48933160 - 48933265
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||  ||| |||||||  ||||||||||||||||||  ||||| |||| ||||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcactaattttcctcgctaatttt 48933259  T
Q  243 gctttt 248  Q
    ||||||    
T  48933260 gctttt 48933265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 9698675 - 9698540
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||  |||||||||||||||||||||||||   ||||| ||| ||||||   |||| ||| ||||||||    
T  9698675 agtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtc 9698576  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  9698575 actaatttccctcgctaattttgctttttctagtag 9698540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 20429467 - 20429602
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||| | ||||  | | |||||||  |||| ||||||||||||    
T  20429467 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccgtc 20429566  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||   ||||||||||||| |||||||    
T  20429567 actaatttcccttgttaattttgctttttctagtag 20429602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 21623031 - 21623157
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| |||||||||||| ||||||||||||||  |||| ||| |||||||  |||| |||||||||||||  |||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| || ||||||||||| |||||||    
T  21623131 ccctcgct-attttgctttttctagtag 21623157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 23539254 - 23539369
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    |||| |||||||||| |||||||||||||||| |||||||||| || |  ||||| |||||  |||| |||||||||||||  |||||||||| ||||||    
T  23539254 ggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 23539353  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  23539354 ttgctttttctagtag 23539369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 27132858 - 27132723
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||  |||| | |||||| |||||  ||||||||||| |||||||||||||||||| ||  |||| ||||  |||||||||||||||||     
T  27132858 agtgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgtt 27132759  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    | ||||||||||| |||||||| ||||| |||||||    
T  27132758 accaatttccctctctaattttactttttctagtag 27132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 36993830 - 36993957
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || | ||||| ||||||| || |||||||||||||||||||||| | || ||  |||| |||||  ||||||| |||||| |||  |||||    
T  36993830 aaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaattt 36993929  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||||||||||||||||||    
T  36993930 ccctccctaattttgcttttcctagtag 36993957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 10222766 - 10222632
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||||  |||||||| ||||| ||||||||||| |||| |||||||||| | |||| | || ||||| |||||| |||||| ||||    
T  10222766 agtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaaaatttatgagaaattttactttttctgtca 10222667  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||||| ||||||||||| || |||| |||||||    
T  10222666 ctaattttcctccctaattatgttttttctagtag 10222632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 25777247 - 25777114
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| | |||||||||||| | | |||| || ||||||| ||||||||||| |  ||||     
T  25777247 tgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcac 25777148  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     ||||| | ||||||||||| | ||| |||||||    
T  25777147 taattttcttccctaattttaccttttctagtag 25777114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 248
Target Start/End: Original strand, 38057636 - 38057761
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||| ||||| ||| |||||||  |||||||||||||| |||     
T  38057636 tgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcac 38057735  T
Q  223 caatttccctccctaattttgctttt 248  Q
     ||||| ||||  | |||||||||||    
T  38057736 taattttcctcgttgattttgctttt 38057761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 2650945 - 2650830
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||||||||  || ||||||| ||||||    
T  2650945 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaatt 2650846  T
Q  241 ttgcttttcctagtag 256  Q
    || ||||| |||||||    
T  2650845 tttctttttctagtag 2650830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 15969796 - 15969922
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgtcatcaatttc 229  Q
    |||||| || ||||||| ||||||  ||||||||||||||||||||||||| | ||||||||| |||||||| |||| | ||||||||||||  ||| ||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatc 15969895  T
Q  230 cctccctaattttgcttttcctagtag 256  Q
    ||||  ||||||| ||||| |||||||    
T  15969896 cctcattaattttactttttctagtag 15969922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 38090339 - 38090400
Alignment:
Q  195 ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  38090339 ttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtag 38090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 23699942 - 23699827
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    |||||| |||||||| |||| |||||| ||||||||||||||| ||||   |||| |||||  |||| |||||||||||||  |||||||||| ||||||    
T  23699942 ggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 23699843  T
Q  241 ttgcttttcctagtag 256  Q
    || ||||| |||||||    
T  23699842 tttctttttctagtag 23699827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 26415426 - 26415553
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| | ||||||| ||||| |||| ||||| |||||||||||||| | | |||| || |||||||| |||||||||||||| ||    
T  26415426 agtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttccatc 26415525  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||| || |||||||| |||||    
T  26415526 actaatttccttctctaattttactttt 26415553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 33427712 - 33427826
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||  ||||||||||||||||||||||||| | ||||||||| |||||||  |||| |||||||  ||||  |||||||||| ||||||    
T  33427712 ggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcatttttt-ggtcactaatttccctcgctaatt 33427810  T
Q  241 ttgcttttcctagtag 256  Q
    ||| |||| |||||||    
T  33427811 ttgttttttctagtag 33427826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 11890284 - 11890184
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||  ||| ||| ||| |||| | |||||||||||||||  ||||||||| || |||| ||||||||||||||||||    
T  11890284 agtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccgtc 11890185  T
Q  221 a 221  Q
    |    
T  11890184 a 11890184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 45664770 - 45664870
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||| ||| || ||||||||| ||||| ||||||||||||||||||||||||||| | ||| ||| |||||||  |||| |||||||| |||    
T  45664770 agtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctgtc 45664869  T
Q  221 a 221  Q
    |    
T  45664870 a 45664870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 21871574 - 21871705
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || |||||| || |||||    |||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||||| |    
T  21871574 agtgaggaaaatttagtgagggaaaatgtaaaatc----tctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgcc 21871669  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   |||| |||| ||||||||| |||| |||||||    
T  21871670 actgattttcctcgctaattttgttttttctagtag 21871705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 1841889 - 1841785
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcc 250  Q
    ||||| |||||||||||| ||| |||||||||||| ||| ||| ||||||| ||||||||||||| | | |  |||||| || ||||||||||||||||     
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttatttttt-cttaactaatttctcttcctaattttgcttttca 1841791  T
Q  251 tagtag 256  Q
    ||||||    
T  1841790 tagtag 1841785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 2093492 - 2093364
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaa-gaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||| | | ||||    || ||||  |||| |||||||||||||  ||||    
T  2093492 aaaaattagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatt 2093393  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| || ||||| ||||| |||||||    
T  2093392 tccctcgctgatttttctttttctagtag 2093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 42926557 - 42926421
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagatttta-ttttttccgt 219  Q
    ||||||| | |||||| || | ||||| ||||||| ||||||||||||||||||||||||||| || || | | |||||||  |||| | ||||||||||    
T  42926557 agtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttccgt 42926458  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  ||||| |||| ||||||||  |||| |||||||    
T  42926457 cactaattttcctcgctaattttattttttctagtag 42926421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 14786752 - 14786645
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||| ||||  || | |||||||||||||||||||||| |||||| || |||||||  |||| |||||||| ||||  ||||| |||| ||||||    
T  14786752 ggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcactaatt 14786653  T
Q  241 ttgctttt 248  Q
    ||| ||||    
T  14786652 ttgttttt 14786645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 27130338 - 27130469
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| ||||||||||| |||||| |||||||  | |||||||||||||||||| |||||| |  || ||| |||||||  ||||||| |||||| |||     
T  27130338 tgagggaaatttagagagggaaaatgtgaaat--ccctctaattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccatcac 27130435  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
      ||||| ||| | |||||||||||| |||||||    
T  27130436 tgatttctctctcgaattttgctttttctagtag 27130469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 687951 - 688003
Alignment:
Q  204 attttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||||| ||||||  ||||||||| |||||||||||||| |||||||    
T  687951 attttatttttttcgtcattgatttccctcgctaattttgctttttctagtag 688003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 5235452 - 5235420
Alignment:
Q  147 acgtgaaatcactctctaattccgtcactaaat 179  Q
    |||||||||| ||||||||||||||||||||||    
T  5235452 acgtgaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 12845005 - 12845124
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||||||||    
T  12845005 agtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtc 12845104  T
Q  221 atcaatttccctccctaatt 240  Q
    |  |||||||||||||||||    
T  12845105 actaatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 9892965 - 9893100
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  9892965 agtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 9893064  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  9893065 actaatttccctcgctaattttgctttttctagtag 9893100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 12951710 - 12951845
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| |||||||||||||||| |||||||||| ||||| ||| |||||||| ||||||| |||||||||    
T  12951710 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccgtc 12951809  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||||||||||||||||    
T  12951810 acaaatttccctctctaattttgcttttcctagtag 12951845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 22083840 - 22083975
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  22083840 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 22083939  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||||||||||||||||    
T  22083940 acaaatttccctccctaattttgcttttcctagtag 22083975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 28364913 - 28365048
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  28364913 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 28365012  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  28365013 actaatttccctcgctaattttgctttttctagtag 28365048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 495764 - 495622
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  495764 agtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 495665  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaatat 263  Q
    |  |||||||||  |||||||||||||| ||||||| ||||||    
T  495664 actaatttcccttgctaattttgctttttctagtagtgaatat 495622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 9885245 - 9885380
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||| |||||||||| || ||||||| ||||||| |||| |||||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  9885245 agtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtc 9885344  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||| ||||||||||| |||||||    
T  9885345 actaatttccctccctgattttgctttttctagtag 9885380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 14886563 - 14886690
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| | ||||| ||||||||||||||||||||||||| | |||||||||| |||||| |||||||||||||| |||    
T  14886563 agtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctgtc 14886662  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||| |||||||||||||||||||    
T  14886663 actaattttcctccctaattttgctttt 14886690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 2992617 - 2992752
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||||||||||||| ||    
T  2992617 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccatc 2992716  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||| |||||||||||||||    
T  2992717 actaatttccctcgctaattatgcttttcctagtag 2992752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 5360431 - 5360546
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||| || |||||||  ||||||||||||||||||  |||||||||| ||||||    
T  5360431 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaatt 5360530  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  5360531 ttgctttttctagtag 5360546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 15364595 - 15364460
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| |||||  |||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  15364595 agtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 15364496  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  15364495 actaatttccctcactaattttgctttttctagtag 15364460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 18033662 - 18033528
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||  || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||| || |||| | ||||||||    
T  18033662 agtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttaatgtttccgtc 18033564  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||||||||||||||||    
T  18033563 acaaatttccctccctaattttgcttttcctagtag 18033528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 22579486 - 22579359
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||  |||| ||||||||||||    
T  22579486 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtc 22579387  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  22579386 actaatttccctcgctaattttgctttt 22579359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 25398004 - 25398138
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  25398004 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 25398103  T
Q  221 atcaatttccctccctaattttgcttttcctagta 255  Q
    |  |||||||||| |||||||| ||||| ||||||    
T  25398104 actaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 6598466 - 6598601
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| |||||  || |||||||  |||| ||||||||||||    
T  6598466 agtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccgtc 6598565  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  6598566 actaatttccctcgctaattttgctttttctagtag 6598601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 12351723 - 12351588
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||||||||||| |||||||||| || || ||| |||||||  |||||||||||||||||    
T  12351723 agtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccgtc 12351624  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||| ||||| | ||||| |||||||    
T  12351623 actaatttccctccttaattatactttttctagtag 12351588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 14872128 - 14872255
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| |||||||||||||||||||||||||| |||||| ||| |||||||  ||||||| ||||||||||  ||||    
T  14872128 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 14872227  T
Q  228 tccctccctaattttgcttttcctagta 255  Q
    |||||| |||||||| ||||||||||||    
T  14872228 tccctctctaatttttcttttcctagta 14872255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 21990311 - 21990177
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||||||||||||| |||||| ||||| | | ||||||| || |||  ||||||||||    
T  21990311 agtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgag-gaatttcatttttccgtc 21990213  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    || |||||||||| |||||||||||||| |||||||    
T  21990212 attaatttccctcgctaattttgctttttctagtag 21990177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 24661146 - 24661011
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| |||||||||||||||| |||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  24661146 agtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 24661047  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  24661046 actaatttccctcgctaattttgctttttctagtag 24661011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 12157513 - 12157380
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaaga-attgtgagagattttattttttccgtc 220  Q
    |||||||||||||||||||   ||||  |||||||| ||||||||||||||||||||||||   ||||||||  |||| || ||||||||||||||||||    
T  12157513 agtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtc 12157414  T
Q  221 atcaatttccctccctaattttgcttttcctagt 254  Q
    |  ||||||||||| ||||||||||||| |||||    
T  12157413 actaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 6065475 - 6065570
Alignment:
Q  158 ctctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttccta 252  Q
    ||||||||||  |||| |||||||||| | ||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  6065475 ctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcctccctaattttgcttttccta 6065570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 11077658 - 11077785
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||| ||||||||||||||||| ||||| ||| |||||||  ||||||| ||||||||||  ||||    
T  11077658 aaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 11077757  T
Q  228 tccctccctaattttgcttttcctagta 255  Q
    ||||||||||||||| ||||| ||||||    
T  11077758 tccctccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 11530227 - 11530358
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| |||||||  |||||||||||||||||||||||| | |  || | | || ||||| ||||||| |||||||||    
T  11530227 agtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccgtc 11530326  T
Q  221 atcaatttccctccctaattttgcttttccta 252  Q
    |  |||||||||||||||||||||||||||||    
T  11530327 acaaatttccctccctaattttgcttttccta 11530358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 12680321 - 12680195
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||| | | ||||||||| |||||  |||||||||||||||||    
T  12680321 agtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtc 12680222  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||| ||||| ||||||| |||||    
T  12680221 actaattt-cctccttaatttttctttt 12680195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 18048790 - 18048925
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || | ||||| ||||||| ||| |||||||  |||||||||||||| ||||| ||||| |||||| |||||||||||||||||    
T  18048790 agtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccgtc 18048889  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| ||||||||| ||||||||||||    
T  18048890 actaattttcctctctaattttgtttttcctagtag 18048925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 27796971 - 27796836
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||| || ||||| || | ||||||| ||||    
T  27796971 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcgtc 27796872  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  27796871 actaatttccctcgctaattttgctttttctagtag 27796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 11049878 - 11049753
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 11049779  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
    ||  ||||||||| |||| |||||||    
T  11049778 cttgctaattttgttttttctagtag 11049753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 21691633 - 21691492
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| | ||||||||||||| |||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||| | ||    
T  21691633 agtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttcatc 21691534  T
Q  221 a-tcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    | | | |||||||| |||||||| |||||  |||||| ||||    
T  21691533 actaattttccctctctaattttactttttttagtagtgaat 21691492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 26224440 - 26224565
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||||| | | |||||||  |||| |||||||||||||  |||||||    
T  26224440 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcc 26224539  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
    ||| |||||||||||||| |||||||    
T  26224540 ctcgctaattttgctttttctagtag 26224565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 15448395 - 15448522
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| |||||||||||||||| |||||||||| |  || ||| |||||||  |||| |||||||||||||  |||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  15448495 ccctcgctaattttgctttttctagtag 15448522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 20182147 - 20182282
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| | ||  | | |||||||  |||| ||||||||||||    
T  20182147 agtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtc 20182246  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||| ||||| |||||||    
T  20182247 actaatttccctcgctaattttactttttctagtag 20182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 22153844 - 22153709
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| | ||  | | |||||||  |||| ||||||||||||    
T  22153844 agtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtc 22153745  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||| ||||| |||||||    
T  22153744 actaatttccctcgctaattttactttttctagtag 22153709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 30834089 - 30833962
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||| ||||| ||||| ||||||||||| |||| |||||||||| |||||| |||| |||||  |||| |||||||||||||  |||||    
T  30834089 aaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaattt 30833990  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  30833989 ccctcgctaattttgctttttctagtag 30833962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 1939358 - 1939244
Alignment:
Q  143 gaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattt 241  Q
    |||||| ||||||| |||||||||||||||| |||||||||| |||||| || |||||||  |||| |||||||| ||||  |||||||||| |||||||    
T  1939358 gaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattt 1939259  T
Q  242 tgcttttcctagtag 256  Q
    ||||||| |||||||    
T  1939258 tgctttttctagtag 1939244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 6978300 - 6978410
Alignment:
Q  143 gaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattt 241  Q
    |||||| ||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||| |  |||||||||| |||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  242 tgcttttccta 252  Q
    |||||||||||    
T  6978400 tgcttttccta 6978410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 11431777 - 11431641
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta--ttttttccg 218  Q
    ||||||| ||||||||||| | |||||| || ||| |||| ||||||||||||||||||||||||  |||||| |||||||||||||||  |||||||||    
T  11431777 agtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgcaa-taaagaatttgtgagagattttattttttttccg 11431679  T
Q  219 tcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||  |||||  |||||||||||| |||||| ||||||    
T  11431678 tcactaatttttctccctaattttacttttcttagtag 11431641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 21140941 - 21141075
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | ||| |||  |||| ||||||||||||    
T  21140941 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccgtc 21141040  T
Q  221 atcaatttccctccctaattttgcttttcctagta 255  Q
    |  ||||||||||  ||||||||||||| ||||||    
T  21141041 actaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 5192319 - 5192199
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||| | ||||||||| |||||||  |||| ||||||||| |||  ||||    
T  5192319 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaatt 5192220  T
Q  228 tccctccctaattttgctttt 248  Q
    | |||| ||||||||||||||    
T  5192219 ttcctcgctaattttgctttt 5192199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 6605626 - 6605498
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||| ||||||| || ||  |||| |||||  |||| |||||||||||||  ||||    
T  6605626 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatt 6605527  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  6605526 tccctcgctaattttgctttttctagtag 6605498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 12200696 - 12200828
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||  ||||||| |||||||||||| |||||||||||| | ||||| ||| |||||||  |||| ||||||||||||    
T  12200696 agtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtc 12200795  T
Q  221 atcaatttccctccctaattttgcttttcctag 253  Q
    |  |||||||||| |||||||||||||| ||||    
T  12200796 actaatttccctcactaattttgctttttctag 12200828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 18492391 - 18492503
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||||||||| | ||||||||||||||||||||||||| ||||  ||| |||||||| |||| |||||||||||||  ||||| | || ||||||    
T  18492391 ggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccgtcactaatttgcatcgctaatt 18492490  T
Q  241 ttgcttttcctag 253  Q
    |||||||| ||||    
T  18492491 ttgctttttctag 18492503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 2669311 - 2669446
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| |  | ||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||| ||||    
T  2669311 agtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtc 2669410  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||  ||||||||||||| |||||||    
T  2669411 actaatttccctcgttaattttgctttttctagtag 2669446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 23281791 - 23281901
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatc 223  Q
    |||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||| || | |||||||  |||||||||||||| |||      
T  23281791 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccatcact 23281890  T
Q  224 aatttccctcc 234  Q
    |||||||||||    
T  23281891 aatttccctcc 23281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 9060115 - 9060219
Alignment:
Q  145 aaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttg 243  Q
    |||| ||||||  ||||||||||| ||||||||||||||| |||||| |||| ||||| |||||||||||||||||||  |||||| |||  ||||||||    
T  9060115 aaacatgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaatttcgctctttaattttg 9060214  T
Q  244 ctttt 248  Q
    |||||    
T  9060215 ctttt 9060219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 12499225 - 12499345
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||| |||||||||||||||||| |||||| || |||||||  |||| |||||||||||||  | ||    
T  12499225 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12499324  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||| ||||    
T  12499325 tccctcgctaattttgttttt 12499345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 12506554 - 12506674
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||| |||||||||||||||||| |||||| || |||||||  |||| |||||||||||||  | ||    
T  12506554 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12506653  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||| ||||    
T  12506654 tccctcgctaattttgttttt 12506674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 12509676 - 12509556
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||| |||||||||||||||||| |||||| || |||||||  |||| |||||||||||||  | ||    
T  12509676 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactt 12509577  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||| ||||    
T  12509576 tccctcgctaattttgttttt 12509556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 14772691 - 14772790
Alignment:
Q  150 tgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||| ||||||||||||||||||||||||| | ||||| ||| |||||||  ||||||| |||| |||||  |||||| ||||||||||||||||||    
T  14772691 tgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttt 14772790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 16250919 - 16250804
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | ||  | | |||||||  |||| |||||||||||||  ||||||||||  |||||    
T  16250919 ggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgttaatt 16250820  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  16250819 ttgctttttctagtag 16250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 33250835 - 33250700
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||  |||||||||||| |||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33250736  T
Q  231 ctccctaattttgcttttcctagtagggaatatata 266  Q
    |||  ||||||||  ||| ||||||| | |||||||    
T  33250735 ctcgttaattttgtcttttctagtagtgtatatata 33250700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 12160983 - 12160849
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtca 221  Q
    ||||||||| |||||| || ||||||| | ||||| |||||||||| ||||||||||||||  | | ||| | |||||||  |||| ||||||| |||||    
T  12160983 agtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaattttcgatcaaaaaatttgtgaggaatttcattttttacgtca 12160884  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      |||||||||| |||||||| ||||| |||||||    
T  12160883 ctaatttccctcgctaattttactttttctagtag 12160849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 12205321 - 12205195
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    |||||||||||||  ||| ||||||||||||||| ||| ||||||||||||||||||||| | |   ||||| |||||||| |||| || ||||||||||    
T  12205321 gtgaggaaaattttaagagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtca 12205222  T
Q  222 tcaatttccctccctaattttgctttt 248  Q
      |||||| || ||||||||| |||||    
T  12205221 ctaatttctcttcctaattttactttt 12205195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 22055749 - 22055619
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| || ||||| || | ||||| ||||||| |||||||||||| ||| | |||||||  ||||| ||||| |||||  ||||||||||||| |||    
T  22055749 agtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctgtc 22055650  T
Q  221 atcaatttccctccctaattttgcttttcct 251  Q
    || |||||||||| ||||||||| |||||||    
T  22055649 attaatttccctctctaattttgtttttcct 22055619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 27705424 - 27705522
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgt 219  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| |||||||||||    
T  27705424 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgt 27705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 26939599 - 26939724
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||  ||||  |||||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttcc 26939698  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
    |||  ||||||| ||||| |||||||    
T  26939699 ctcagtaattttactttttctagtag 26939724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 33547555 - 33547647
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||| |||| || ||||||| ||||||| || |||||||  ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  33547555 aaaaattagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtc 33547647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 10458802 - 10458901
Alignment:
Q  158 ctctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||| ||||||| |||||||||||||||||||| ||||| |||||  | || |||||||||||||  |||||||||| |||||||| ||||| |||||||    
T  10458802 ctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttttctagtag 10458901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 16118148 - 16118279
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    |||||| ||||||||  || ||| ||| ||||||| |||||||||| ||||| |||||||||| | | | ||||| || |||||||||| ||||||||||    
T  16118148 agtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtc 16118247  T
Q  221 atcaatttccctccctaattttgcttttccta 252  Q
    |  ||||||| ||||||||||| | |||||||    
T  16118248 actaatttccgtccctaattttacctttccta 16118279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 5270394 - 5270491
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa--ttgtgagagattttattttttcc 217  Q
    ||||||| || |||||||| |||||| |||||||  ||||||||||||||||||||||||| | | |||| ||  |||||||| ||||||||||||||    
T  5270394 agtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttcc 5270491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 11350191 - 11350315
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||| |||| || ||||||| | ||||| ||||||||||| ||||||||||||||| |  || ||||| || ||  |||| | ||||||||||  |||||    
T  11350191 aaaaattagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatt-tgtgatttttt-tgttttccgtcacaaattt 11350288  T
Q  229 ccctccctaattttgcttttcctagta 255  Q
    |||||||||||||||||||||||||||    
T  11350289 ccctccctaattttgcttttcctagta 11350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 13145011 - 13145100
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttcc 217  Q
    |||| |||| || ||||||||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||    
T  13145011 aaaaattagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 15509184 - 15509285
Alignment:
Q  148 cgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaattttgctt 246  Q
    ||||||||| ||||||||||||||||||||||||| | ||||  | | |||||||  |||| |||||||||||||  |||||||||| |||||||| |||    
T  15509184 cgtgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctt 15509283  T
Q  247 tt 248  Q
    ||    
T  15509284 tt 15509285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 17919568 - 17919673
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtcatcaatttccctccctaattttgcttttcc 250  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||  |||   |||| ||||||||||||||  ||||| ||| ||||||||| |||| |    
T  17919568 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgctaattttgttttttc 17919667  T
Q  251 tagtag 256  Q
    ||||||    
T  17919668 tagtag 17919673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 28668132 - 28668237
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcc 250  Q
    ||||| || ||||||||||||| |||||||||| | ||| ||||| |||||  ||||||||||||||||||   ||||||||| |||||||| ||||| |    
T  28668132 aaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttttc 28668231  T
Q  251 tagtag 256  Q
    ||||||    
T  28668232 tagtag 28668237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 15961537 - 15961409
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||  |||||||||||||| |||||||||||| | |||  |||| || ||  |||| |||||||||||||  ||||    
T  15961537 aaaaattagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatt 15961438  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||  ||||||||||||| |||||||    
T  15961437 tccctcgttaattttgctttttctagtag 15961409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 1954890 - 1955015
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| |||| ||||||| |||| ||||||||  |||||  |||| ||||   ||||||||||||||||||   |||    
T  1954890 aaaaattagtgaaggaaaacatgaaatc-ctctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatt 1954988  T
Q  228 tccctccctaattttgcttttcctagt 254  Q
    ||||| |||||||||||||||||||||    
T  1954989 tcccttcctaattttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 8844228 - 8844170
Alignment:
Q  198 tgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| ||||| |||||||    
T  8844228 tgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtag 8844170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 343700 - 343600
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||  || ||||||||| ||||| ||||||||||| ||||||||| ||||| |||||| || |||||||  |||| ||||||| ||||    
T  343700 agtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacgtc 343601  T
Q  221 a 221  Q
    |    
T  343600 a 343600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 10929614 - 10929498
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagag-attttattttttccgtcatcaatttccctccctaat 239  Q
    ||||||| ||||||| |||| | ||||||||| |||||||||| || || ||||| ||||| | |||| |||||||||||||  ||||| | ||||||||    
T  10929614 ggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccctaat 10929515  T
Q  240 tttgcttttcctagtag 256  Q
    |||| |||||| |||||    
T  10929514 tttgattttccaagtag 10929498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 20692941 - 20692821
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||||| |||||||||||||||| |||||| || || | |   ||||||||||||||||||  ||||    
T  20692941 aaaaattagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaatt 20692842  T
Q  228 tccctccctaattttgctttt 248  Q
    | ||||  |||||||| ||||    
T  20692841 ttcctcgttaattttgttttt 20692821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 2396209 - 2396279
Alignment:
Q  126 aggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt 196  Q
    |||||||||||||||   ||||||||||||  ||||||  |||||||| |||||||| |||||||||||||    
T  2396209 aggaaaatttagagagcaaaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatt 2396279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 14036622 - 14036684
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||| |||| ||||||||||    
T  14036622 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgc 14036684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 28234061 - 28234118
Alignment:
Q  195 ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttccta 252  Q
    |||||||| |||||||||||||| |||| |||||| |||| | |||||||||||||||    
T  28234061 ttgtgagaaattttattttttccctcattaatttcgctccttgattttgcttttccta 28234118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 30745842 - 30745721
Alignment:
Q  134 ttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccct 232  Q
    ||||||| |||||||||||||||  ||||||| |||||||||||||||| | | |||| || |||| |  ||||||||||||||  |||  ||||   ||    
T  30745842 ttagagagggaaaacgtgaaatc--tctctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatcactaattcttct 30745745  T
Q  233 ccctaattttgcttttcctagtag 256  Q
    |||||| ||||||||||| |||||    
T  30745744 ccctaactttgcttttccaagtag 30745721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 28221671 - 28221725
Alignment:
Q  198 tgagagattttattttttccgtcatcaatttccctccctaattttgcttttccta 252  Q
    ||||| |||||||||||||| |||  ||||||||||||| |||||| ||||||||    
T  28221671 tgagaaattttattttttccctcactaatttccctccctgattttgtttttccta 28221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 13668123 - 13668071
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaatttt 182  Q
    ||||||||||| ||||||||||||||  | |||||||||| ||| ||||||||    
T  13668123 aaatttagagagggaaaacgtgaaattcccctctaattccatcattaaatttt 13668071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 19175878 - 19175846
Alignment:
Q  158 ctctctaattccgtcactaaattttgcaaccaa 190  Q
    ||||||||||||||||||||||||||| |||||    
T  19175878 ctctctaattccgtcactaaattttgcgaccaa 19175846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 1638447 - 1638582
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| ||||||  ||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  1638447 agtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtc 1638546  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||| ||||||||||||    
T  1638547 actaatttccctccctaattttgtttttcctagtag 1638582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 22128449 - 22128314
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  22128449 agtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtc 22128350  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||| |||||| |||| |||||||    
T  22128349 actaatttccctccctgattttgttttttctagtag 22128314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 25147721 - 25147855
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||||||| |||||||||    
T  25147721 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtc 25147820  T
Q  221 atcaatttccctccctaattttgcttttcctagta 255  Q
    || |||||||||| ||||||||||||||| |||||    
T  25147821 ataaatttccctctctaattttgcttttcttagta 25147855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 19839182 - 19839314
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatc 223  Q
    ||||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||||      
T  19839182 gaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcact 19839281  T
Q  224 aatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||| |||||||||||||| |||||||    
T  19839282 aatttccctcgctaattttgctttttctagtag 19839314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 5399609 - 5399744
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||  ||||||| |||||||||    
T  5399609 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccgtc 5399708  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||||||||| |||||||||||||||||    
T  5399709 acaaattttcctccctaagtttgcttttcctagtag 5399744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 33914059 - 33914194
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || | ||||| ||||||| ||||||||||||||||||||||||||| |||||| || || ||||  ||||||| |||||||||    
T  33914059 agtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtc 33914158  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||||||||||||||||    
T  33914159 acaaatttccctccctaattttgcttttcctagtag 33914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 4606959 - 4606831
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| ||||||||||||||||||||||||||||||||||||  ||||  |||| |||| |||||||||||| |||||||  ||||    
T  4606959 aaaaattagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatt 4606860  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||||| |||||||||||||    
T  4606859 tccctccctaattttacttttcctagtag 4606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 5473849 - 5473984
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||||||| ||||| ||||| |||||  |||| |||||| |||||    
T  5473849 agtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccgtc 5473948  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  5473949 actaatttccctcgctaattttgctttttctagtag 5473984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 9059069 - 9058954
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| |||||||||||||||| |||||||||| ||||| ||||| |||||| ||||||| ||||| ||||  |||||||||||||||||    
T  9059069 ggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccctaatt 9058970  T
Q  241 ttgcttttcctagtag 256  Q
    ||||||||||||||||    
T  9058969 ttgcttttcctagtag 9058954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 29238431 - 29238558
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || | ||||| | ||||| || |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||  |||||    
T  29238431 aaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataattt 29238530  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||||||| ||||| ||||||||||||    
T  29238531 ccctccctagttttgtttttcctagtag 29238558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 32175874 - 32175739
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||||||||||||||||    
T  32175874 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtc 32175775  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||  ||||||||||||| |||||||    
T  32175774 actaatttccctcgttaattttgctttttctagtag 32175739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 9913259 - 9913393
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtca 221  Q
    |||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| | ||||||||| ||||| |||||||||||||    
T  9913259 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtca 9913358  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||||| |||||||||||||  |||| |||||||    
T  9913359 ctaattttcctccctaattttaatttttctagtag 9913393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 38619854 - 38619982
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||| | ||||||||| || ||||  |||| |||||||||||||| ||||    
T  38619854 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatt 38619953  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  38619954 tccctcgctaattttgctttttctagtag 38619982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 38645757 - 38645885
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||| |||||||||||||||||| ||||||||| |||||||  |||| |||||||||||||  ||||    
T  38645757 aaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatt 38645856  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  38645857 tccctcgctaattttgctttttctagtag 38645885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 55309350 - 55309214
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgt 219  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| | ||||||||||    
T  55309350 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttccgt 55309251  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  |||||||||| |||||||||||||| |||||||    
T  55309250 cactaatttccctcgctaattttgctttttctagtag 55309214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 8878891 - 8879010
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||||||||||||||| ||||| ||| || ||||||||||||||||||||||||  |||||    
T  8878891 aaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaattt 8878990  T
Q  229 ccctccctaattttgctttt 248  Q
    ||||| || |||||||||||    
T  8878991 ccctctctgattttgctttt 8879010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 24682444 - 24682329
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||||||||| ||||||||||||  ||||||||||||| ||||  ||||| |||||  ||||||||||||||||||| |||||||||||||||||    
T  24682444 ggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaatt 24682345  T
Q  241 ttgcttttcctagtag 256  Q
    || ||||| |||||||    
T  24682344 tttctttttctagtag 24682329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 27040162 - 27040027
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  ||||| |||||||||||    
T  27040162 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccgtc 27040063  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  27040062 actaatttccctcgctaattttgctttttctagtag 27040027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 46286366 - 46286231
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||||||||||||||||    
T  46286366 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtc 46286267  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||| || |||||||||||||| |||||||    
T  46286266 actaatttccgtcactaattttgctttttctagtag 46286231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 29625332 - 29625452
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||||||||||| || |  ||| |||||||  |||| |||||||||||||| ||||    
T  29625332 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatt 29625431  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||||||||    
T  29625432 tccctcgctaattttgctttt 29625452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 4586887 - 4586760
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||| | | ||| ||| |||||||  |||| |||||||||||||  |||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  4586787 ccctcgctaattttgctttttctagtag 4586760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 18051839 - 18051966
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacc-aaagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||   | | |||||||| |||| ||||||||||||    
T  18051839 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtc 18051938  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  18051939 actaatttccctcactaattttgctttt 18051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 25026565 - 25026684
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| || || ||| |||||||| |||| |||||||||||||  |||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  229 ccctccctaattttgctttt 248  Q
    ||||| |||||||| |||||    
T  25026665 ccctcactaattttactttt 25026684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 30269125 - 30268990
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||| ||||||||||||||||||||||||||| |||||| || ||| |||  |||| ||||||||||||    
T  30269125 agtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtc 30269026  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   ||||||||| |||||||||||||| |||||||    
T  30269025 actgatttccctcgctaattttgctttttctagtag 30268990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 30283064 - 30283199
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||| ||||||||||||||||||||||||||| |||||| || ||| |||  |||| ||||||||||||    
T  30283064 agtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccgtc 30283163  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   ||||||||| |||||||||||||| |||||||    
T  30283164 actgatttccctcgctaattttgctttttctagtag 30283199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 37378760 - 37378621
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  37378760 agtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtc 37378661  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaa 260  Q
    |  ||||| |||| |||||||||||||| |||| ||||||    
T  37378660 aataattttcctcgctaattttgctttttctagcagggaa 37378621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 25225107 - 25225232
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtcatcaatttc 229  Q
    |||||||||||  |||| ||||||||| ||||||||||| || | |||||||||| | ||||||||| ||| ||||||||| |||||||||||  |||||    
T  25225107 aaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatt-tgacagattttatattttccgtcattgatttc 25225205  T
Q  230 cctccctaattttgcttttcctagtag 256  Q
    ||||||||||||| ||||| |||||||    
T  25225206 cctccctaatttttctttttctagtag 25225232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 9670609 - 9670481
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  9670609 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 9670510  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||| ||||| |||||||    
T  9670509 tccctcgctaatttttctttttctagtag 9670481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 38223511 - 38223631
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||| ||||||||  ||||| ||||||||||| ||||||||||||||| ||||| ||| |||| ||  ||||||||||||||||||    
T  38223511 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtca 38223610  T
Q  222 tcaatttccctccctaatttt 242  Q
      ||| |||||||||||||||    
T  38223611 ctaatctccctccctaatttt 38223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 16915377 - 16915504
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||  ||||||| ||||||||||  ||||||||||||||| |||||  |||| ||||||||||||||||||||| |||  |||||    
T  16915377 aaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaattt 16915476  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
     ||||||| ||||||||||| |||||||    
T  16915477 tcctccctgattttgctttttctagtag 16915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 22168268 - 22168403
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||  ||||||||||||| ||||||||||||| ||||| ||| || ||||  |||| ||||||||||||    
T  22168268 agtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccgtc 22168367  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  22168368 actaatttccctcgctaattttgctttttctagtag 22168403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 263
Target Start/End: Original strand, 54539294 - 54539428
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| |||||||||| ||||| |||||||||||||||| || || ||| |||||||  |||| |||||||||||||  |||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  229 ccctccctaattttgcttttcctagtagggaatat 263  Q
     |||  |||||||||||||| ||||||| ||||||    
T  54539394 tccttgctaattttgctttttctagtagtgaatat 54539428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 2275815 - 2275694
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| | ||| ||| |||||||  |||| ||||||||||||    
T  2275815 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtc 2275716  T
Q  221 atcaatttccctccctaatttt 242  Q
    |  |||||||||| ||||||||    
T  2275715 actaatttccctcgctaatttt 2275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 18714924 - 18715037
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||||| ||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  ||||||||||||||||||   ||||||||| ||||| ||    
T  18714924 aaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttatttccctcgctaatatt 18715023  T
Q  243 gcttttcctagtag 256  Q
    |||||| |||||||    
T  18715024 gctttttctagtag 18715037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 30507994 - 30508122
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| || ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||||||||||| |||||   |||    
T  30507994 aaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagatt 30508093  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||| |||||||||||||| |||||||    
T  30508094 ttcctcgctaattttgctttttctagtag 30508122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 125 - 248
Target Start/End: Original strand, 36689680 - 36689804
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatc 223  Q
    |||| |||||||| |  ||||||||||||||| ||||||||||||||||||||||||||| |||||| || || ||||| |||| ||||||||| |||      
T  36689680 gagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcact 36689779  T
Q  224 aatttccctccctaattttgctttt 248  Q
    ||||||||||  |||||||| ||||    
T  36689780 aatttccctcgttaattttgttttt 36689804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 4627207 - 4627080
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || |||||| || ||||| |||||||||| |||||||||||||| | | |||  |||| |||||  |||| |||||||||||||| |||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  4627107 ccctcgctaattttgctttttctagtag 4627080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 9238742 - 9238635
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||| ||||  ||||||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||||||||  |||||||||| ||||||    
T  9238742 ggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 9238643  T
Q  241 ttgctttt 248  Q
    ||||||||    
T  9238642 ttgctttt 9238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 13028945 - 13028818
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||  |||||||||||||  |||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
     |||| |||| ||||||||| |||||||    
T  13028845 tcctcgctaagtttgctttttctagtag 13028818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 13565052 - 13564917
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||  |||||||||||||||||||||||||   ||||| ||| ||||||   |||| ||| ||||||||    
T  13565052 agtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccgtc 13564953  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  13564952 actaatttccctcgctaattttgctttttctagtag 13564917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 45532716 - 45532589
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| |||||||||||||||| |||||||||| | ||| | | |||||||  |||| ||||||||||||    
T  45532716 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtc 45532617  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||||||  |||||||||||||    
T  45532616 actaatttccctcgttaattttgctttt 45532589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 19680559 - 19680426
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcat 222  Q
    ||||| |||||| | || ||||||||| ||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||||||||     
T  19680559 tgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcac 19680460  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     || ||||||| |||||||| ||||| |||||||    
T  19680459 taaattccctcactaatttttctttttctagtag 19680426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 37761977 - 37761912
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca 189  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37761977 tgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 39234942 - 39235068
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttat-tttttccgt 219  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||  || |||||||||||| |||||| || |||||||| ||||||| |||||||||    
T  39234942 agtgagggaaatttagagaaggaaaacgtgaaat--ctctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttccgt 39235039  T
Q  220 catcaatttccctccctaattttgctttt 248  Q
     |  | |||||||||||||||||| ||||    
T  39235040 tacaagtttccctccctaattttggtttt 39235068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 7112076 - 7111948
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| || ||||| |||| |||||||||||||||||||| | |||||  |||| |||||  |||| |||||||||||||  ||||    
T  7112076 aaaaattagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 7111977  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  7111976 tccctcgctaattttgctttttctagtag 7111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 12105990 - 12106109
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||| | ||||||||||||||||||||| ||||| ||||||||| || ||||| |||||||||||||| |||  ||||    
T  12105990 aaaaattagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgagaaattttattttttccatcaataatt 12106088  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| |||||||| |||||    
T  12106089 tccctcgctaattttactttt 12106109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 44783502 - 44783618
Alignment:
Q  142 ggaaaacgtgaaatcactct-ctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaat 239  Q
    ||||||| ||||||| |||| |||||||||||| |||||||||| ||||| ||||| |||||  |||| |||||||||||||  |||||||||| ||| |    
T  44783502 ggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctagt 44783601  T
Q  240 tttgcttttcctagtag 256  Q
    ||||||||| |||||||    
T  44783602 tttgctttttctagtag 44783618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 9239411 - 9239297
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||||||||| |||||||||||||||| | |||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatt 9239312  T
Q  228 tccctccctaatttt 242  Q
    ||||||  |||||||    
T  9239311 tccctcgttaatttt 9239297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 42055427 - 42055532
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcc 250  Q
    ||||||||| |||||||||| |||||||||||| ||||| ||| |||||||  |||| ||||||| |||||   ||||||||| |||||||||||||| |    
T  42055427 aaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttttc 42055526  T
Q  251 tagtag 256  Q
    ||||||    
T  42055527 tagtag 42055532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 30568116 - 30568009
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||| ||||| |||||||||||||||| |||||||| | |||| |||| |||||||  |||| |||||||||||||  |||||| ||| ||||||    
T  30568116 ggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaatttcgctcgctaatt 30568017  T
Q  241 ttgctttt 248  Q
    ||| ||||    
T  30568016 ttgttttt 30568009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 22156738 - 22156664
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt 196  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  22156738 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatt 22156664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 3613006 - 3613123
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttcc-gtcatcaatttcc 230  Q
    |||||||| | ||||||||||||  |||||||||| |||||||||| ||||| ||||| ||||| ||||| || ||||||||||   | || ||| ||||    
T  3613006 tttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattcc 3613105  T
Q  231 ctccctaattttgctttt 248  Q
    ||||||||||||||||||    
T  3613106 ctccctaattttgctttt 3613123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 18744207 - 18744147
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaatttt 182  Q
    ||||||| |||||| | || ||||||||||||||| |||||||||||||||||||||||||    
T  18744207 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 18744147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 34557190 - 34557318
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||| || |||||| || |||||  ||| ||||||||||| |||||||||  ||||| ||||| ||||  |||||||||||||||||||  ||||    
T  34557190 aaaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaatt 34557289  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||| ||||||||   |||||||||||    
T  34557290 ttcctcactaattttatctttcctagtag 34557318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 30420170 - 30420035
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    |||||| |||||||||||   |||||| ||||||  |||||||||| |||||||||||  | | |||||  |||| || |   |||||||||||||||||    
T  30420170 agtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtc 30420071  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||||||||||||||||||| |||||||    
T  30420070 actaattttcctccctaattttgctttttctagtag 30420035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 14944753 - 14944814
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa 190  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  14944753 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 14944814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 313615 - 313687
Alignment:
Q  150 tgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    ||||||| ||||||||||  || |||||||||||| ||||||||| || |||| |||||||||||||||||||    
T  313615 tgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtca 313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 12071962 - 12072089
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| | ||||| ||||||||||||||||||||||||||| | ||| ||| || |||   |||| ||||||||  ||    
T  12071962 agtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcgatc 12072061  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||| ||| ||||||||||||||    
T  12072062 actaatttcgctcgctaattttgctttt 12072089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 45091282 - 45091336
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    |||||||| || ||||||||| |||||  ||||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgc 45091336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 6553811 - 6553904
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtca 221  Q
    |||| |||| || ||| ||| ||||||| ||||||||||  || |||||||||||| ||||| | | || |||| |||||||||||||||||||    
T  6553811 aaaaattagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtca 6553904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 45091344 - 45091396
Alignment:
Q  204 attttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||| |||||||||||||  |||||||||| ||||||||| |||| |||||||    
T  45091344 atttcattttttccgtcactaatttccctcgctaattttgttttttctagtag 45091396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 21020074 - 21020198
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccc 231  Q
    ||||| || ||||||| | |||||  |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||    
T  21020074 tttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccc 21020173  T
Q  232 tccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||    
T  21020174 tccctaattttgcttttcctagtag 21020198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19610336 - 19610471
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  19610336 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 19610435  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||||||||||||||||    
T  19610436 acaaatttccctccctaattttgcttttcctagtag 19610471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 27449086 - 27449221
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  27449086 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 27449185  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  27449186 actaatttccctcgctaattttgctttttctagtag 27449221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 23217344 - 23217218
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||| |||| |||||||  |||| ||||||||| |||    
T  23217344 gtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctca 23217245  T
Q  222 tcaatttccctccctaattttgctttt 248  Q
    | ||||||||||||||||||| |||||    
T  23217244 ttaatttccctccctaatttttctttt 23217218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 15064122 - 15063994
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| ||||||||||  ||||    
T  15064122 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatt 15064023  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||||||    
T  15064022 tccctccctaattttgcttttcctagtag 15063994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 16299859 - 16299994
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  16299859 agtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 16299958  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||| ||||||||||||||||||||||||||    
T  16299959 acaaatttcgctccctaattttgcttttcctagtag 16299994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 30219336 - 30219471
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || | ||||| ||||||| ||||||||||||||||||||||||||| |||||| || || ||||  ||||||| |||||||||    
T  30219336 agtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccgtc 30219435  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||||||||||||||||    
T  30219436 acaaatttccctccctaattttgcttttcctagtag 30219471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 36543747 - 36543882
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||| ||||||| |||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| ||    
T  36543747 agtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttccatc 36543846  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||||||||||||| ||||| |||||||    
T  36543847 actaattttcctccctaatttttctttttctagtag 36543882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 28389971 - 28390105
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||||||||||||  |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  28389971 agtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtc 28390070  T
Q  221 atcaatttccctccctaattttgcttttcctagta 255  Q
    |  ||||| |||| || ||||| ||||| ||||||    
T  28390071 actaattttcctctctgattttactttttctagta 28390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 262
Target Start/End: Original strand, 5260935 - 5261076
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||| ||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  5260935 agtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 5261034  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaata 262  Q
    |  |||||||||| |||||||||||||| ||||||| |||||    
T  5261035 actaatttccctcactaattttgctttttctagtagtgaata 5261076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 5565727 - 5565855
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||||||||| ||||||||||  ||||||||||||||| |||||  |||| |||||||||||||||||||||||||  ||||    
T  5565727 aaaaattagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatt 5565826  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||||| ||||||||||| |||||||    
T  5565827 tccctccctgattttgctttttctagtag 5565855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 29215990 - 29216130
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| |||||||||||| |||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  29215990 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 29216089  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    |  ||||| ||||| ||||||||||||||||||||| ||||    
T  29216090 acaaattttcctccataattttgcttttcctagtagtgaat 29216130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 7623668 - 7623533
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || |||||| |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||    
T  7623668 agtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccgtc 7623569  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| || ||||| ||||| |||||||    
T  7623568 actaatttccctcgctgatttttctttttctagtag 7623533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19223447 - 19223582
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| |  ||||||||| ||||| ||||||||||||||||||||||||| | ||||| ||| |||||||  |||| ||||||||||||    
T  19223447 agtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtc 19223546  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    | ||||||||||| |||||||||||||| |||||||    
T  19223547 accaatttccctcgctaattttgctttttctagtag 19223582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 48404866 - 48404993
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  48404966 ccctcgctaattttgctttttctagtag 48404993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 1628213 - 1628347
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||| | || || ||| || ||||  |||||||||||||| ||    
T  1628213 agtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttccatc 1628312  T
Q  221 atcaatttccctccctaattttgcttttcctagta 255  Q
    || ||||||||||||||||||| ||||| ||||||    
T  1628313 attaatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 46942486 - 46942620
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtca 221  Q
    |||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| | ||||||||| ||||| |||||||| ||||    
T  46942486 gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtca 46942585  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||||||| |||||||||||| |||| |||||||    
T  46942586 ctaatttccttccctaattttgatttttctagtag 46942620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 5744421 - 5744549
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| || || ||||| |||||  ||||||| ||||||||||  ||||    
T  5744421 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaatt 5744520  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||||||||||||||||||||||||||    
T  5744521 ttcctccctaattttgcttttcctagtag 5744549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 5781380 - 5781508
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| || || ||||| |||||  ||||||| ||||||||||  ||||    
T  5781380 aaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaatt 5781479  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||||||||||||||||||||||||||    
T  5781480 ttcctccctaattttgcttttcctagtag 5781508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 13921330 - 13921458
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  13921330 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 13921429  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||| |||||||||||||| |||||||    
T  13921430 ttcctcgctaattttgctttttctagtag 13921458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 26830579 - 26830451
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgt 219  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||  ||| |||||||  |||||| ||||||||||    
T  26830579 agtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttccgt 26830480  T
Q  220 catcaatttccctccctaattttgctttt 248  Q
    ||| ||||| ||||||||||||| |||||    
T  26830479 cattaattttcctccctaatttttctttt 26830451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 50665766 - 50665638
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| |||||||||| |||||||||||||||| | ||||||||| |||||  ||||||| ||||||||||| ||||    
T  50665766 aaaaattagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatt 50665667  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| ||||||||||||||| ||||||    
T  50665666 tccctctctaattttgcttttcttagtag 50665638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 11219136 - 11219271
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||| | || ||||||||||||||| |||||||||||||||| |||||||||| || |  ||| |||||||| |||| ||||||||||||    
T  11219136 agtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccgtc 11219235  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  11219236 actaatttccctcgctaattttgttttttctagtag 11219271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 18104667 - 18104532
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  18104667 agtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccgtc 18104568  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  18104567 aataatttccctcgctaattttgctttttctagtag 18104532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 19270001 - 19269874
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| |||| |||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  19270001 agtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 19269902  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  19269901 actaatttccctcgctaattttgctttt 19269874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 21088757 - 21088883
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtcatcaattt 228  Q
    ||||||||| || ||||||| ||||||| ||||| ||||||||||  ||||||||| ||||| ||||| || |||||||||||||||||||||  |||||    
T  21088757 aaaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatt-tgtgagattttattttttccgtcactaattt 21088855  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    |||||||||| |||||||||| ||||||    
T  21088856 ccctccctaactttgcttttcttagtag 21088883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 25882568 - 25882695
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||| | ||||||||| |||||||  |||| ||||||||||||    
T  25882568 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccgtc 25882667  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  25882668 actaatttccctcgctaattttgctttt 25882695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 29236050 - 29236182
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa--ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||| |||||  |||||||| |||| |||||||||||||  ||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgacc-aagaattttgtgagaaatttcattttttccgtcactaatt 29236148  T
Q  228 tccctccctaattttgcttttcctagtagggaat 261  Q
    |||||| |||||||||||||| ||| ||| ||||    
T  29236149 tccctcgctaattttgctttttctaatagtgaat 29236182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 1311096 - 1310961
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttt-attttttccgt 219  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| ||||||| |||||| |||||||||||    
T  1311096 agtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gattttcattttttccgt 1310998  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  ||||| |||  |||||||||||||| |||||||    
T  1310997 cactaattttccttgctaattttgctttttctagtag 1310961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 26098818 - 26098946
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||| |||  ||||    
T  26098818 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatt 26098917  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  26098918 tccctcgctaattttgctttttctagtag 26098946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 46012858 - 46012730
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||  ||||||||||||||| | ||| ||||| |||||||||||||||||||||||||  ||||    
T  46012858 aaaaattagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaatt 46012759  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | ||||||| ||||||||||| |||||||    
T  46012758 ttcctccctgattttgctttttctagtag 46012730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 4393487 - 4393360
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacc-aaagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||   | | |||||||| |||| ||||||||||||    
T  4393487 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccgtc 4393388  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  4393387 actaatttccctcactaattttgctttt 4393360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 8110337 - 8110472
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||  |||||||||||||||| |||||||| | ||||| ||| |||||||  |||| ||||||||||||    
T  8110337 agtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccgtc 8110436  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  8110437 actaatttccctcactaattttgctttttctagtag 8110472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 11007820 - 11007685
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | ||||||   |||| ||||||||||||    
T  11007820 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccgtc 11007721  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  |||||||||||||| |||||||    
T  11007720 actaatttcccttactaattttgctttttctagtag 11007685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 11915756 - 11915891
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | || ||||  |||| || |||||||||    
T  11915756 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtc 11915855  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  11915856 actaatttccctcgctaattttgctttttctagtag 11915891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 18091684 - 18091557
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| | ||||| ||||||||||||||||||||||||||| |||||| || |||||||  |||| ||||||||||||    
T  18091684 agtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtc 18091585  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  18091584 actaatttccctcgctaattttgctttt 18091557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 21816727 - 21816854
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||| ||||| |||||||    
T  21816827 ccctcgctaatttttctttttctagtag 21816854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 27968921 - 27969048
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||| ||||||||||| |||| |||||||||| |||||  ||  ||||||||||||||||| ||||||||  |||||    
T  27968921 aaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaattt 27969020  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    |||||||| ||||||||||| |||||||    
T  27969021 ccctccctgattttgctttttctagtag 27969048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 20762045 - 20761952
Alignment:
Q  164 aattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    ||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtag 20761952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 13905168 - 13905040
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| |||||||||||||  ||||    
T  13905168 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatt 13905069  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    || ||| |||||||||||||| |||||||    
T  13905068 tcgctctctaattttgctttttctagtag 13905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 21490164 - 21490036
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| || ||||| ||||||||||| ||||||||||||||| ||||| ||||| |||||| |||| ||||||||||||||  |||    
T  21490164 aaaaattagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatt 21490065  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| ||||||||| |||| |||||||    
T  21490064 tccctcactaattttgttttttctagtag 21490036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 37283549 - 37283661
Alignment:
Q  150 tgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||| |||||||||||||||||||||||||   ||||| ||||| |||||  ||||||| ||||||||||  |||||||||||||||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  249 cctagtagggaat 261  Q
    |||| ||| ||||    
T  37283649 cctaatagtgaat 37283661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 8428169 - 8428304
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||| | ||||| ||| |||||||  |||| ||||||||||||    
T  8428169 agtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtc 8428268  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||  |||| |||||||    
T  8428269 actaatttccctcgctaattttattttttctagtag 8428304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 9652576 - 9652711
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| || |  | | |||||||  |||| ||||||||||||    
T  9652576 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtc 9652675  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| | |||||||||||| |||||||    
T  9652676 actaatttccctcgccaattttgctttttctagtag 9652711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 10941782 - 10941667
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| |||||||||||| |||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||||||  ||||||    
T  10941782 ggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttactaatt 10941683  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  10941682 ttgctttttctagtag 10941667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 17269713 - 17269606
Alignment:
Q  150 tgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||| |||||||  |||||||||||||| || | ||||||| || ||||||||||||||    
T  17269713 tgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccatcgctaattttgctttt 17269614  T
Q  249 cctagtag 256  Q
     |||||||    
T  17269613 tctagtag 17269606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 17762640 - 17762775
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  |||| ||||||||||||    
T  17762640 agtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtc 17762739  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| | || |||||||    
T  17762740 actaatttccctcgctaattttgttctttctagtag 17762775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 18539802 - 18539929
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | || ||||  |||| ||||||||||||    
T  18539802 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccgtc 18539901  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  18539902 actaatttccctctctaattttgctttt 18539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19063960 - 19064095
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  |||| ||||||||||||    
T  19063960 agtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtc 19064059  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| | || |||||||    
T  19064060 actaatttccctcgctaattttgttctttctagtag 19064095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 27212918 - 27212823
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttc 216  Q
    ||||||| ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||| || |||||| ||||||| ||||||||||||||    
T  27212918 agtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttc 27212823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 36564576 - 36564441
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||| | ||||||| |||||||||| |||||||||||| ||| |||||||||| ||| || ||||||||||||||| ||    
T  36564576 agtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttccatc 36564477  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||||||||||||| ||||| |||||||    
T  36564476 actaattttcctccctaatttttctttttctagtag 36564441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 49915449 - 49915584
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| || || | | |||| || |||||||| |||||||||    
T  49915449 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccgtc 49915548  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||  ||||||| |||||| ||||||    
T  49915549 acaaatttccctctttaattttacttttcttagtag 49915584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 28859596 - 28859710
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||| || | ||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||  |||| |||||||||||||  ||||    
T  28859596 aaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaatt 28859695  T
Q  228 tccctccctaatttt 242  Q
    | |||| ||||||||    
T  28859696 ttcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 20615480 - 20615359
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||| |||| |||||||| | |||||| || |||||||| |||||||||||||||||    
T  20615480 agtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccgtc 20615381  T
Q  221 atcaatttccctccctaatttt 242  Q
       ||||| ||||| |||||||    
T  20615380 tctaattttcctccttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 23773482 - 23773615
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||| ||||||||  ||||    
T  23773482 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatt 23773581  T
Q  228 tccctccctaattttgcttttcctagtagggaat 261  Q
    |||||  ||||||||| |||| ||||||| ||||    
T  23773582 tcccttactaattttgttttttctagtagtgaat 23773615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 1745617 - 1745498
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| ||||||| || |||  |||||||||||  ||||    
T  1745617 aaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttcatttttccgtcactaatt 1745519  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||||||||    
T  1745518 tccctcgctaattttgctttt 1745498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 17582438 - 17582338
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||||||||||||||||    
T  17582438 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccgtc 17582339  T
Q  221 a 221  Q
    |    
T  17582338 a 17582338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 43329893 - 43329765
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| || |||||  |||||||||||||||||||||||| | ||||| ||||| |||||  |||| |||||||||||||  ||||    
T  43329893 aaaaattagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 43329794  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  43329793 tccctcgctaattttgctttttctagtag 43329765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 11837331 - 11837216
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||  ||||||||||||||||||||||||| | ||||||||| |||||||  |||| ||||||||| |||  |||||||||| ||||||    
T  11837331 ggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacgaatttccctcgctaatt 11837232  T
Q  241 ttgcttttcctagtag 256  Q
    ||| |||| |||||||    
T  11837231 ttgttttttctagtag 11837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 15490033 - 15490159
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| ||  |||||||||||||| |||| |||||  ||||||||||||||| |||||| |||| ||||||||||||||||||| ||||    
T  15490033 agtgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcgtc 15490131  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||  |||||| |||||||||||    
T  15490132 actaatttttctccctgattttgctttt 15490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 26390743 - 26390636
Alignment:
Q  150 tgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  |||| |||||||||||||  |||||| ||| ||||||||||||||    
T  26390743 tgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgctaattttgctttt 26390644  T
Q  249 cctagtag 256  Q
     |||||||    
T  26390643 tctagtag 26390636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 29704169 - 29704042
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | ||  |||||||||||||| |||| |||||||||||||||||||||| | || || | |||||||  |||| ||||||||||||    
T  29704169 agtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccgtc 29704070  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  29704069 actaatttccctcgctaattttgctttt 29704042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 31433735 - 31433862
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||| | ||||||||||||||  ||||||||||||||||||||||||| | ||||| ||| |||||||| |||||||||||||  ||    
T  31433735 agtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttctatc 31433834  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||  |||||||| |||||    
T  31433835 actaatttccctatctaattttactttt 31433862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 31250087 - 31250221
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||| |||||||   ||||| ||||||||||| ||||||||||||||| ||||| | | |||| ||  ||||||||||||||||||    
T  31250087 gtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtca 31250186  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||| | ||||||||||||||| ||| |||||||    
T  31250187 ctaatcttcctccctaattttgcattttctagtag 31250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 8546265 - 8546370
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||  ||| |||||||  |||| |||||||||||||  ||||| |||| ||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  243 gctttt 248  Q
    ||||||    
T  8546365 gctttt 8546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 10803721 - 10803854
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttatttt-ttccgtcat 222  Q
    |||| |||||||| || ||||||||| ||||  |||| ||||||||||| |||||||||| |||||  |||| |||||  |||| ||||| |||||||||    
T  10803721 gagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcat 10803820  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     |||||||||||||||||| |||||| |||||||    
T  10803821 taatttccctccctaatttggctttttctagtag 10803854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 29956372 - 29956505
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| |||||| | || |||||| |||||||| || |||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||| |||     
T  29956372 tgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcac 29956471  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     |||||||||| |||||||| ||||| |||||||    
T  29956472 taatttccctcgctaattttactttttctagtag 29956505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 30005527 - 30005660
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| |||||| | || |||||| |||||||| || |||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||| |||     
T  30005527 tgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcac 30005626  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     |||||||||| |||||||| ||||| |||||||    
T  30005627 taatttccctcgctaattttactttttctagtag 30005660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 3461440 - 3461312
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||||||||||| |||||||||| | ||| | | |||||||  ||||||||||||| ||||  ||||    
T  3461440 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatt 3461341  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||| || |||||||||||||| |||||||    
T  3461340 tccttcgctaattttgctttttctagtag 3461312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 6447344 - 6447248
Alignment:
Q  161 tctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||| ||||||||| ||||  |||||||||| || |||  |||||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  6447344 tctaattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtag 6447248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 19545508 - 19545608
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || | ||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  19545508 agtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 19545607  T
Q  221 a 221  Q
    |    
T  19545608 a 19545608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 27182785 - 27182660
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || |||||||  |||||| |||||||||| ||||||||||| |||  ||||| | ||| ||||| |||||||||||||  ||||  |||||    
T  27182785 aaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt--gtcactaattt 27182688  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||||| ||||||||||||    
T  27182687 ccctccctaattttgtttttcctagtag 27182660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 11085471 - 11085344
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || |||||  |||||||| ||||||||||||||||||||||||||| ||||||||| || ||||  |||| ||||||||||| |   ||||    
T  11085471 aaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccgttactgattt 11085372  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    | ||| |||||||| ||||| |||||||    
T  11085371 ctctcgctaattttactttttctagtag 11085344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 29451100 - 29451219
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||| | ||||||||||||  | ||| || ||||| |||| |||||||||||||  |||||    
T  29451100 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaattt 29451199  T
Q  229 ccctccctaattttgctttt 248  Q
    |||||  |||||||| ||||    
T  29451200 ccctcgttaattttgttttt 29451219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 47263394 - 47263267
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||  || ||||| || ||||||||||||||| ||||| ||| |||||||  |||| |||||||| |||| ||||||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    || ||  ||||||||||||| |||||||    
T  47263294 ccttcgttaattttgctttttctagtag 47263267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 8543467 - 8543534
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca 189  Q
    ||||||| |||||| | || ||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  8543467 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgacca 8543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 20088394 - 20088492
Alignment:
Q  118 aatcagtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttatttttt 215  Q
    ||||||||||  |||||||| || | ||||| |||||||  ||||||||||| |||||||||||||  ||||||||| || ||||| ||||||||||||    
T  20088394 aatcagtgagagaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttt 20088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 253
Target Start/End: Complemental strand, 26963384 - 26963254
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaag-aattgtgagagattttattttttccgtcat 222  Q
    ||||| |||||||| || |||||| || ||||  |||||||||||||| |||||||||| ||||||||| | |||| | | |||| ||||||| |||||     
T  26963384 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcac 26963285  T
Q  223 caatttccctccctaattttgcttttcctag 253  Q
     ||||||||||  |||||||| |||| ||||    
T  26963284 taatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 27711298 - 27711236
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaa 191  Q
    |||| |||| |||||||||| ||||||  ||||||||||||||||||||||||||| ||||||    
T  27711298 aaaaattagcgacggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 6088358 - 6088230
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| |||||  ||||||||||||| | |||||||||  ||||| |||||  ||||  |||| |||||||||||||  ||||    
T  6088358 aaaaattagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatt 6088259  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||  || ||||||||||| |||||||    
T  6088258 tcccttacttattttgctttttctagtag 6088230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 6718728 - 6718808
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtca 221  Q
    ||||||||||||||| || |||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||||||||    
T  6718728 ggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtca 6718808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 45304374 - 45304458
Alignment:
Q  164 aattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttt 247  Q
    |||||||||| ||||||||| ||| |||||| |||| ||  ||||||||||||||||||| |||||| |||| | ||||||||||    
T  45304374 aattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaatttctctccttgattttgcttt 45304458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 18380022 - 18380157
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||  || |||||| || ||||| |||| |||||||||||||||||||| | | ||| | | ||||||   |||| ||||||||||||    
T  18380022 agtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccgtc 18380121  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   ||||||||| |||||||| ||||| |||||||    
T  18380122 actgatttccctcgctaattttactttttctagtag 18380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaat 179  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 50240751 - 50240844
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtca 221  Q
    |||| |||| || ||| ||| ||||||| ||||||||||  || ||||||||||||  |||| |||||  ||||||||||||||||||||||||    
T  50240751 aaaaattagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtca 50240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 23233293 - 23233230
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaag 192  Q
    |||| |||| || ||||||||||||||  ||||| |||||| |||||||||||||| |||||||    
T  23233293 aaaaattagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaag 23233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 13615427 - 13615475
Alignment:
Q  136 agagacggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    ||||| ||||||||||||||  |||||||||| | ||||||||||||||    
T  13615427 agagaaggaaaacgtgaaattcctctctaatttcatcactaaattttgc 13615475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 37992099 - 37992234
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| || ||||||| |||||  |||||||| |||||||||    
T  37992099 agtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccgtc 37992198  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||||||||||||||||||||||||||    
T  37992199 actaattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 15251610 - 15251728
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtcatcaatttc 229  Q
    ||||||| ||| |||||||||||||||  |||||||||| ||||||||||||||| |||||| ||| |||||||||||||||||||||||||  ||||||    
T  15251610 aaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatcgtgagagattttattttttccgtcactaatttc 15251709  T
Q  230 cctccctaattttgctttt 248  Q
    |||||||||||||||||||    
T  15251710 cctccctaattttgctttt 15251728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 3823133 - 3823260
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  3823133 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccgtc 3823232  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  3823233 actaatttccctcgctaattttgctttt 3823260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 17824753 - 17824618
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||||||| |||||||||    
T  17824753 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtc 17824654  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  17824653 acaaatttccctctctaattttgctttttctagtag 17824618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 29345072 - 29345206
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| || || | | |||||| ||||||||||||||||||||    
T  29345072 gtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtca 29345171  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||||||||||||||||||| ||||| |||||||    
T  29345172 ctaatttccctccctaatttttctttttctagtag 29345206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 8555441 - 8555306
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| | ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  8555441 agtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 8555342  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  8555341 actaatttccctcgctaattttgctttttctagtag 8555306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 26399137 - 26399028
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||  ||||    
T  26399137 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatt 26399038  T
Q  228 tccctcccta 237  Q
    ||||||||||    
T  26399037 tccctcccta 26399028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 6816520 - 6816385
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| | ||    
T  6816520 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttcatc 6816421  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||| |||||||||||||||    
T  6816420 actaatttccctcgctaattatgcttttcctagtag 6816385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 17104002 - 17103867
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||||||| |||||||||    
T  17104002 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtc 17103903  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||| ||| ||||||||| |||| |||||||    
T  17103902 acaaatttctctctctaattttgttttttctagtag 17103867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 24576161 - 24576026
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  24576161 agtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 24576062  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  24576061 actaatttccctcgctaattttgctttttctagtag 24576026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 43431696 - 43431561
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| |||||||||| |||||||||||||||||||||| ||| |||||||  |||| ||||||||||||    
T  43431696 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtc 43431597  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||| ||||| |||||||    
T  43431596 actaatttccctcactaatttttctttttctagtag 43431561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 27869248 - 27869373
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||| |||  |||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 27869347  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
    ||| |||||||||||||| |||||||    
T  27869348 ctcgctaattttgctttttctagtag 27869373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 32247916 - 32248044
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||  |||| |||||||||||||  ||||    
T  32247916 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatt 32248015  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||  ||||||||||||| |||||||    
T  32248016 tccctcgttaattttgctttttctagtag 32248044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 4330978 - 4331113
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||  ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  4330978 agtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtc 4331077  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  4331078 actaatttccctcgctaattttgctttttctagtag 4331113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19240867 - 19241002
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  19240867 agtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 19240966  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  19240967 actaatttccctcgctaattttgctttttctagtag 19241002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 19256220 - 19256347
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||  ||||||||||||||||||  |||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    |||||  ||||||||||||| |||||||    
T  19256320 ccctcgttaattttgctttttctagtag 19256347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19314051 - 19314186
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  19314051 agtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 19314150  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  19314151 actaatttccctcgctaattttgctttttctagtag 19314186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 16062054 - 16061941
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||||  |||| |||||||||||||  |||||||||| ||||||||    
T  16062054 aaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 16061955  T
Q  243 gcttttcctagtag 256  Q
     ||||| |||||||    
T  16061954 actttttctagtag 16061941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 23752416 - 23752296
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| || ||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||||  |||     
T  23752416 aaaaattagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaata 23752317  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||||||||    
T  23752316 tccctcgctaattttgctttt 23752296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 248
Target Start/End: Complemental strand, 6084378 - 6084256
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagattttattttttccgtcatca 224  Q
    |||| |||||||||||| ||||| || ||||| |||||||||||||||||||||||||   ||||| ||||| || |||||||||||||||||||||  |    
T  6084378 gaggtaaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatt-tgggagattttattttttccgtcacta 6084280  T
Q  225 atttccctccctaattttgctttt 248  Q
    ||||  ||||||||||||||||||    
T  6084279 atttatctccctaattttgctttt 6084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 11938753 - 11938879
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| ||||||| || |||  |||||||||||  |||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttcatttttccgtcactaattt 11938851  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  11938852 ccctcgctaattttgctttttctagtag 11938879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 22939323 - 22939448
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| || || ||| |||||||  |||| |||||||||||||  |||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcc 22939422  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
     || |||||||||||||| |||||||    
T  22939423 ttcactaattttgctttttctagtag 22939448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 19488191 - 19488063
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||  ||||||  ||||||||||||||||||||||||||| ||||| ||||| |||||  |||| |||||||||||||  ||||    
T  19488191 aaaagttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 19488092  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  19488091 tccctcgctaattttgctttttctagtag 19488063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 30687943 - 30688071
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||| || |||||| || ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||| ||||   |||    
T  30687943 aaaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgatt 30688042  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  30688043 tccctcgctaattttgctttttctagtag 30688071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 8789876 - 8789975
Alignment:
Q  158 ctctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| ||||| ||||  ||||| |||||||||||||||||||||||||||    
T  8789876 ctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctagtag 8789975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 17810298 - 17810433
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| |||||||||| |||||||||||||||| ||||| | | |||||||  |||| ||||||||||||    
T  17810298 agtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtc 17810397  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| |||||||||||||| |||||||    
T  17810398 actaattttcctcgctaattttgctttttctagtag 17810433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 21350478 - 21350613
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || | ||||||| |||||  |||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  21350478 agtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 21350577  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  || ||||||||||| |||||||    
T  21350578 actaatttcccttgcttattttgctttttctagtag 21350613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 24193313 - 24193198
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||||||||  |||||||||| ||||||    
T  24193313 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 24193214  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  24193213 ttgctttttctagtag 24193198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 25655975 - 25655860
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||||||||| |||||||||||  |||||||||||||| ||||  ||||| |||||  |||| |||||||||||||  |||||||||| ||||||    
T  25655975 ggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcactaatt 25655876  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  25655875 ttgctttttctagtag 25655860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 27910881 - 27910766
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  || || ||||| |||||  |||| |||||||||||||  |||||||||| ||||||    
T  27910881 ggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 27910782  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  27910781 ttgctttttctagtag 27910766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 27957300 - 27957185
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  || || ||||| |||||  |||| |||||||||||||  |||||||||| ||||||    
T  27957300 ggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 27957201  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  27957200 ttgctttttctagtag 27957185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 30467083 - 30466956
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| |||||||||||| |||||||||||||| ||||| | | || ||||  |||||| |||||||||||  |||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  30466983 ccctcgctaattttgctttttctagtag 30466956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 33652567 - 33652694
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| |||||||  ||||||| |||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  33652567 agtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 33652666  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  33652667 actaatttccctcgctaattttgctttt 33652694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 10917849 - 10917962
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||| || |||| ||||||||||||||||||||||||||||| |||  ||||  ||||  ||||||| ||||||||||  |||||||||||||||||||    
T  10917849 aaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccctccctaatttt 10917948  T
Q  243 gcttttcctagtag 256  Q
    |||||| |||||||    
T  10917949 gctttttctagtag 10917962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 13061061 - 13060933
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||| ||||||||||||||| || || ||| |||||||  |||| |||||||||||||  ||||    
T  13061061 aaaaattagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatt 13060962  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||| |||||||||||||| |||||||    
T  13060961 tacctcgctaattttgcttttgctagtag 13060933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 18010177 - 18010070
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| | ||| ||| |||||||  |||| |||||||||||||  |||||| ||| ||||||    
T  18010177 ggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgctaatt 18010078  T
Q  241 ttgctttt 248  Q
    ||||||||    
T  18010077 ttgctttt 18010070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 18844681 - 18844546
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||  || | |||||||||| |||||| |||| |||||  ||||||| |||||| ||    
T  18844681 agtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttccatc 18844582  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||| || |||||||||||||||||||||||||    
T  18844581 acaaattaccatccctaattttgcttttcctagtag 18844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 40289557 - 40289423
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||| ||||||||||||||||||||||| ||||| ||| |||||||| | || ||||||||||||    
T  40289557 agtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccgtc 40289459  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| ||||||||  |||| |||||||    
T  40289458 actaattttcctcgctaattttaatttttctagtag 40289423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 8824855 - 8824960
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcc 250  Q
    ||||| ||||||||||||||||||||||||||| || || |||| ||||||  |||| ||||||||| |||  |||||||||| |||||||||||||| |    
T  8824855 aaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttttc 8824954  T
Q  251 tagtag 256  Q
    ||||||    
T  8824955 tagtag 8824960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 5670298 - 5670194
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||  |||||||||||||  |||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  229 ccctc 233  Q
    |||||    
T  5670198 ccctc 5670194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 24636660 - 24636776
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| | ||| | | |||||||  |||| |||||||||||||  |||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  229 ccctccctaattttgct 245  Q
    |||||  ||||||||||    
T  24636760 ccctcgttaattttgct 24636776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 25273457 - 25273330
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||| ||||||| || |||  ||||| |||||  ||||    
T  25273457 aaaaattagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgag-gactttcattttttcgtcactaatt 25273359  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||  ||||||||||||| |||||||    
T  25273358 tccctcgttaattttgctttttctagtag 25273330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 4647872 - 4647757
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    |||||| |||||||| ||||||||||||||||||||||||||| || |  | | |||||||  |||| |||||||||||||  |||||||||| ||||||    
T  4647872 ggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 4647773  T
Q  241 ttgcttttcctagtag 256  Q
    ||| |||| |||||||    
T  4647772 ttgttttttctagtag 4647757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 6817054 - 6817189
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||| ||||||||||||||||||||||||||  ||||| | | |||||||  |||| ||||||||||||    
T  6817054 agtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtc 6817153  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   |||| |||  |||||||||||||| |||||||    
T  6817154 actgattttccttgctaattttgctttttctagtag 6817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 9915177 - 9915043
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||| | ||||||||||||||| | ||  ||| |||||||  |||| ||||||||||||    
T  9915177 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcga-catggaatttgtgaggaatttcattttttccgtc 9915079  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||| ||| |||||||||||||| |||||||    
T  9915078 actaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 25000560 - 25000433
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| | ||| ||||||||||||||||| ||||| ||| || || ||||| |||||  |||| |||||||||||||  |||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||| ||||| |||||||    
T  25000460 ccctcactaattttactttttctagtag 25000433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 9631406 - 9631539
Alignment:
Q  125 gaggaaaatttagagacggaaaacgtgaaatcactctctaattcc-gtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcat 222  Q
    |||| |||||| | || ||||||||||||||  |||||||||||| ||||||||||||||| |  | |||||| |||||  ||||||||||||||||||     
T  9631406 gagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcac 9631505  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     ||||| |||  |||||||||||||| |||||||    
T  9631506 taattttccttgctaattttgctttttctagtag 9631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 256
Target Start/End: Original strand, 17003260 - 17003397
Alignment:
Q  120 tcagtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccg 218  Q
    |||||||| |||||||||||| ||||||||| ||||  ||||||||| | |||| |||||||||  | ||| ||| || |||| | |||||||||||||     
T  17003260 tcagtgagaaaaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttccc 17003359  T
Q  219 tcatcaatttccctccctaattttgcttttcctagtag 256  Q
     ||  ||||| ||||||||||||||||||| |||||||    
T  17003360 acactaattttcctccctaattttgctttttctagtag 17003397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 29350923 - 29351059
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttc-cgt 219  Q
    ||||||| | |||||| || ||||||| ||||||| |||||||||| |||||||||||||||| ||||  | | |||||||  |||| ||||||||  ||    
T  29350923 agtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctagt 29351022  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  |||||||||| |||||||||||||| |||||||    
T  29351023 cactaatttccctcgctaattttgctttttctagtag 29351059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 31399638 - 31399510
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||||||||||||  |||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||| | |||  ||||    
T  31399638 aaaaattagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatt 31399539  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    ||||||  |||||||| |||| |||||||    
T  31399538 tccctcgttaattttgttttttctagtag 31399510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 21219357 - 21219242
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    |||| |||||||||| |||||||||||| |||||||||||||| |||||| || || ||||  |||| |||||||||||||  |||||| ||| || |||    
T  21219357 ggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgatt 21219258  T
Q  241 ttgcttttcctagtag 256  Q
    || ||||| |||||||    
T  21219257 tttctttttctagtag 21219242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 31344309 - 31344174
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| |||||| |||||||  |||||||||||||||| |||||||||| | ||| | | || ||||| |||| ||||||||| ||    
T  31344309 agtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttccatc 31344210  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||| || |||||||| |||||| ||||||    
T  31344209 actaatttccttctctaattttacttttcttagtag 31344174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 32961659 - 32961786
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||  ||||||||||||||||||||| ||||| ||||| | | |||||||  |||| |||||||| |||    
T  32961659 agtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctgtc 32961758  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |   ||||||||| ||||||||||||||    
T  32961759 actgatttccctcgctaattttgctttt 32961786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 19493762 - 19493692
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| |||||||||||||    
T  19493762 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtca 19493692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 5879204 - 5879302
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgt 219  Q
    ||||||| |||||||| || | ||||||| ||||  ||||||||||||||||||||||||| | ||||| | | |||||||  ||||||||||||||||    
T  5879204 agtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 15289679 - 15289741
Alignment:
Q  159 tctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||| ||||||    
T  15289679 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtc 15289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 15470048 - 15470110
Alignment:
Q  159 tctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||| ||||||    
T  15470048 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtc 15470110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 25274654 - 25274732
Alignment:
Q  179 ttttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||| ||||| ||||| |||||| |||| |||||||||||||  |||||||||| |||||||||||||| |||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtag 25274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 2265474 - 2265383
Alignment:
Q  163 taattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagt 254  Q
    |||||| ||||||||||||||  | ||||||||| ||||  |||||||||||||||||||  ||||||  ||||||||||| |||||||||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaatttcg-tccctaattttacttttcctagt 2265383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 24479925 - 24479874
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttg 183  Q
    ||||||||| ||||||||||||||  ||||||||||| ||||||||||||||    
T  24479925 atttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 33413087 - 33413045
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  33413087 ggaaaacgtaaaatccctctctaattccgtcactaaattttgc 33413045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 24479876 - 24479823
Alignment:
Q  195 ttgtgagagattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||||||||||| |||||| ||||  |||||||||| |||||| |||||||    
T  24479876 ttgtgagagattttactttttctgtcactaatttccctctctaattatgctttt 24479823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 35678114 - 35678069
Alignment:
Q  203 gattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||||||||||| |||| ||||| ||||| |||||||||||||    
T  35678114 gattttattttttccttcattaattttcctccttaattttgctttt 35678069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 6e-35; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 27428149 - 27428022
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtc 220  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  | ||  |||||||||||| ||||    
T  27428149 agtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtc 27428050  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||||||||||||||| |||||    
T  27428049 actaatttccctccctaatttttctttt 27428022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 25397918 - 25397790
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||   ||||||| ||||||||||  ||||    
T  25397918 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatt 25397819  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||||||    
T  25397818 tccctccctaattttgcttttcctagtag 25397790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 23423885 - 23423758
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||  ||||||| |||| |||||  |||||    
T  23423885 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcgtcacaaattt 23423786  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||| |||||||||    
T  23423785 ccctccctaattttgcttatcctagtag 23423758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 33818698 - 33818563
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  33818698 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 33818599  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||| |||||||||||| |||||||    
T  33818598 acaaatttccctccccaattttgctttttctagtag 33818563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 7888799 - 7888944
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||||| ||||| |||||||| |||||||||||||||| | ||||| ||| |||||||  |||| ||||||||||||    
T  7888799 agtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtc 7888898  T
Q  221 atcaatttccctccctaattttgcttttcctagtag-ggaatatat 265  Q
    |  |||||||||| |||||||||||||| ||||||| |||||||||    
T  7888899 aataatttccctcgctaattttgctttttctagtagtggaatatat 7888944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 16121976 - 16121841
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  |||||||||||||||||    
T  16121976 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccgtc 16121877  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  16121876 actaatttccctcgctaattttgctttttctagtag 16121841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 17039768 - 17039633
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||| ||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  17039768 agtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 17039669  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| |||||||||||||| |||||||    
T  17039668 actaattttcctcactaattttgctttttctagtag 17039633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 20959510 - 20959645
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | || || ||| |||||||  |||||||||||||||||    
T  20959510 agtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccgtc 20959609  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   |||| ||||||||||||| ||||| |||||||    
T  20959610 agtgattttcctccctaattttactttttctagtag 20959645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 10420389 - 10420267
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    |||||||||| |||||||| ||||||| ||||||| ||||||||||  ||||||||||||||| ||||| | ||||||||| ||||||||||||||||||    
T  10420389 agtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtc 10420290  T
Q  221 atcaatttccctccctaattttg 243  Q
    |  |||||||||| |||||||||    
T  10420289 actaatttccctctctaattttg 10420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 746998 - 746878
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  746998 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 746899  T
Q  228 tccctccctaattttgctttt 248  Q
    |||||| ||||||||||||||    
T  746898 tccctcgctaattttgctttt 746878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 618296 - 618423
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  618296 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 618395  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  618396 actaatttccctcgctaattttgctttt 618423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 11927923 - 11927796
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||  || ||||||| ||||||||||||||| ||    
T  11927923 agtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatc 11927824  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
       |||||  ||||||||||||||||||    
T  11927823 tctaatttatctccctaattttgctttt 11927796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 13620256 - 13620129
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||| ||||||||||| ||||| ||||||||| |||||  |||| |||||||||||||||||||||||||  |||||    
T  13620256 aaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaattt 13620157  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    |||||||| ||||| ||||| |||||||    
T  13620156 ccctccctgatttttctttttctagtag 13620129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 24138970 - 24138851
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| |||||  || |||||||| |||| ||||||||||||| ||||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  229 ccctccctaattttgctttt 248  Q
     |||| ||||||||||||||    
T  24138870 tcctcgctaattttgctttt 24138851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 25673365 - 25673231
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| ||| |||||| ||||||| |||||||||||||||||| |||||||| ||||||||| ||||  ||| ||||||||||||||||    
T  25673365 agtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgtaggag-ttttattttttccgtc 25673267  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||||||||||||  ||||||||||||    
T  25673266 actaattttcctccctaatttttattttcctagtag 25673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 33735088 - 33734975
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||| ||||| | |||| |||||||||||||||||||||| ||||| |||||  |||| ||||||||||||||| |||| ||||| |||||||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  243 gcttttcctagtag 256  Q
    ||||||||||||||    
T  33734988 gcttttcctagtag 33734975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 38837801 - 38837673
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||||||| |||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  38837801 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 38837702  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  38837701 tccctcgctaattttgctttttctagtag 38837673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 3080833 - 3080702
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||| |||||||||| || ||||||| ||||||| ||||| |||| | ||||||| |||||  || |||||||| ||||||||||||||||||||| ||    
T  3080833 agtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatc 3080734  T
Q  221 atcaatttccctccctaattttgcttttccta 252  Q
    |  ||||||||| |||||||||||||||||||    
T  3080733 acgaatttccctacctaattttgcttttccta 3080702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 8886988 - 8886853
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||| ||||    
T  8886988 agtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtc 8886889  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| |||||||||||||| |||||||    
T  8886888 acaaattttcctcgctaattttgctttttctagtag 8886853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 12045729 - 12045864
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| |||||  |||||||||||||||||||||||| | ||||| | | |||||||  |||| ||||||||||||    
T  12045729 agtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccgtc 12045828  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  12045829 actaatttccctcgctaattttgctttttctagtag 12045864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 23975637 - 23975764
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  23975637 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 23975736  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  23975737 actaatttccctcgctaattttgctttt 23975764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 36196396 - 36196531
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaaga-attgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || |||||| |||||||| ||||||||||||||||||||||||||| ||||  ||  |||||||  |||| ||||||||||||    
T  36196396 agtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccgtc 36196495  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  36196496 actaatttccctcgctaattttgctttttctagtag 36196531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 2472841 - 2472716
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| |||||||||||||||| |||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||||    
T  2472841 atttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 2472742  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
     || |||||||||||||| |||||||    
T  2472741 ttcactaattttgctttttctagtag 2472716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 35620470 - 35620354
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| |||||||  |||||||||||||||||||||||||| ||||| ||| ||||||| || ||||||||||||||||  |||||||    
T  35620470 atttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgag-gaatttattttttccgtcactaatttcc 35620372  T
Q  231 ctccctaattttgctttt 248  Q
    ||| ||||||||||||||    
T  35620371 ctcgctaattttgctttt 35620354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 10494746 - 10494874
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  10494746 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 10494845  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||  ||||||||| |||||||    
T  10494846 tccctcgctacatttgctttttctagtag 10494874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 16632004 - 16631876
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||  ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  16632004 aaaaattagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 16631905  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||| ||||| |||||||    
T  16631904 tccctcgctaatttttctttttctagtag 16631876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 26708714 - 26708587
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||| ||  |||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||| ||| |||||||    
T  26708614 ccctcgctaattttgcattttctagtag 26708587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 26978448 - 26978321
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||| ||  |||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||| ||| |||||||    
T  26978348 ccctcgctaattttgcattttctagtag 26978321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 17036540 - 17036414
Alignment:
Q  131 aatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttc 229  Q
    |||||||||| ||||||||  ||||| ||||||||||| ||||||||||||||| ||||| ||| |||||||  ||||||||| ||||||||  ||| ||    
T  17036540 aatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctc 17036441  T
Q  230 cctccctaattttgcttttcctagtag 256  Q
     |||||||||||||| ||| |||||||    
T  17036440 gctccctaattttgcattttctagtag 17036414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 4125318 - 4125190
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| |||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||||||||  ||||    
T  4125318 aaaaattagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 4125219  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||| ||||| |||||||    
T  4125218 tccctcgctaattttactttttctagtag 4125190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 7003865 - 7003732
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || |||||||||||||||  |||||||||||||||||||||||||| | ||  ||||| |||||  ||||| |||||||||||    
T  7003865 agtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccgtc 7003768  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  7003767 actaatttccctcgctaattttgttttttctagtag 7003732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 32726855 - 32726735
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    ||||||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||| ||| |||| |  | |||||| |||||| |||  |||||    
T  32726855 aaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaattt 32726756  T
Q  229 ccctccctaattttgcttttc 249  Q
    | |||||||||||||||||||    
T  32726755 cgctccctaattttgcttttc 32726735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 40484053 - 40484181
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| || | ||| |||| ||| |||||||||  ||||    
T  40484053 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatt 40484152  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||| ||||| |||||||    
T  40484153 tccctcgctaatttttctttttctagtag 40484181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 8108977 - 8108862
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||  ||||||||||||||||||||||||||| ||||   |||| |||||  |||| |||||||||||||  |||||||||| ||||||    
T  8108977 ggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctctctaatt 8108878  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  8108877 ttgctttttctagtag 8108862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 12328363 - 12328228
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||  ||||||||||||||||||||||||||| | ||| | | |||||||  |||| |||||||||||     
T  12328363 agtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtt 12328264  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  12328263 actaatttccctcactaattttgctttttctagtag 12328228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 15060975 - 15061102
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || | ||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||| |||    
T  15060975 agtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcggtc 15061074  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  15061075 actaatttccctcgctaattttgctttt 15061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 20188078 - 20187951
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||| ||||||||| ||  ||||||||  |||||||||||||||| |||| |||||||||| | ||| ||| |||||||  |||||||||||||||||    
T  20188078 agtgagaaaaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtc 20187979  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||| || ||||||||||||||    
T  20187978 actaatttccttcgctaattttgctttt 20187951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 36716337 - 36716202
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||| | || |||||||||||||||  ||||||||||| ||| |||||||| | |||| |||| |||||||  |||| ||||||||| ||    
T  36716337 agtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttccatc 36716238  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  36716237 actaatttccctcgctaattttgttttttctagtag 36716202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 5982649 - 5982783
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgtca 221  Q
    |||||||||||||| || ||||||| | ||||| ||||||||||||||||||||| ||||| ||||| ||| |||||||  |||  | ||||||||||||    
T  5982649 tgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtca 5982748  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      |||||||||| || ||||||||||| |||||||    
T  5982749 ctaatttccctcgctgattttgctttttctagtag 5982783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 28265610 - 28265477
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| |||||| | || |||| |||| ||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| |||||||||||||     
T  28265610 tgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcac 28265511  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     ||||| |||| |||||||| ||||| |||||||    
T  28265510 taattttcctcgctaattttactttttctagtag 28265477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 23408982 - 23409118
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagatttta-ttttttccgt 219  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| | ||| | | |||||||  |||| | ||||||||||    
T  23408982 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttccgt 23409081  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  |||||  ||| |||||||||||||| |||||||    
T  23409082 cactaatttttctcgctaattttgctttttctagtag 23409118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 23974682 - 23974578
Alignment:
Q  153 aatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcct 251  Q
    |||| |||||||||| ||||| |||||||| | || || ||||| |||||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||    
T  23974682 aatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttccttcctaatttttcttttcct 23974583  T
Q  252 agtag 256  Q
    |||||    
T  23974582 agtag 23974578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 17079407 - 17079506
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||| | ||||||| | ||||| ||||||||||||||||||||||||||| ||||| | | |||| || ||||||||||||||||||    
T  17079407 agtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccgtc 17079506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 35778150 - 35778277
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| || ||| |||| || | |||||||||| ||||| ||||| ||||||||||||||||||||| |||  ||||    
T  35778150 aaaaattagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatt 35778249  T
Q  228 tccctccctaattttgcttttcctagta 255  Q
    |||||||| |||||| ||||| ||||||    
T  35778250 tccctcccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 36832027 - 36831892
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || |||||| || ||||| |||||||||||| |||||||||||||  ||||| ||| || ||||  |||| ||||||| ||||    
T  36832027 agtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcgtc 36831928  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
       |||||||||| |||||||||||||| |||||||    
T  36831927 cctaatttccctcactaattttgctttttctagtag 36831892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 25652719 - 25652593
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    |||||| |||||||| || |||||| || ||||| ||||||||||||||||| ||||||||| || || ||| |||||||  |||| |||||||| ||||    
T  25652719 gtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtca 25652620  T
Q  222 tcaatttccctccctaattttgctttt 248  Q
       ||||||||| ||||||||||||||    
T  25652619 ctgatttccctcgctaattttgctttt 25652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 17772098 - 17771970
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| | ||||| ||||||||||||||||||||||||||| | ||| ||| || ||||  |||| |||||||||||||  ||||    
T  17772098 aaaaattagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatt 17771999  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| || ||||| ||||| |||||||    
T  17771998 tccctcgctgatttttctttttctagtag 17771970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 36597470 - 36597342
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| | ||||  ||||||||||| ||||||||||||| | ||||| ||||| |||||  ||||||| ||||||||||| ||||    
T  36597470 aaaaattagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatt 36597371  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||||||||||| |||||||    
T  36597370 tttctcccaaattttgctttttctagtag 36597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 33816895 - 33816786
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||  || |||||||||||||||||||||||| ||||| ||| |||||||  ||||||| ||||| |||    
T  33816895 agtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctgtc 33816796  T
Q  221 atcaatttcc 230  Q
    |  |||||||    
T  33816795 acaaatttcc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 17986731 - 17986863
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||   |||||||||||||||||||||||||| || || ||| ||||||   |||| ||||||||||||    
T  17986731 agtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccgtc 17986830  T
Q  221 atcaatttccctccctaattttgcttttcctag 253  Q
    |  |||||| ||| |||||||| ||||| ||||    
T  17986831 actaatttctctcactaattttactttttctag 17986863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 13974215 - 13974080
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| |||||| |||||||||||||||||  | ||||  | | ||||||   |||| ||||||| ||||    
T  13974215 agtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcgtc 13974116  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
       |||||||||| |||||||||||||| |||||||    
T  13974115 gctaatttccctcgctaattttgctttttctagtag 13974080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 31853212 - 31853131
Alignment:
Q  135 tagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttatttttt 215  Q
    |||||| | ||||| ||||||| ||||||||||||||||||||||||||| |||| || | || |||| |||||||||||||    
T  31853212 tagagaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 16472310 - 16472183
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaa-ttttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||||| | |||| ||| |||| ||||||||||| ||||||||| |||||| ||||| ||| || |||  ||||||||||||| || ||  ||||    
T  16472310 aaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaatt 16472211  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||||| |||||||||||| |||||||    
T  16472210 t-cctcccaaattttgctttttctagtag 16472183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 22649458 - 22649406
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaatttt 182  Q
    ||||||||||| |||||||||||||||  ||||||||||||||| ||||||||    
T  22649458 aaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 16464723 - 16464766
Alignment:
Q  213 tttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||  ||||||||||||||||||||| |||||||||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtag 16464766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 29727983 - 29727928
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaa 177  Q
    ||||||| |||||| | || ||||||||||||||  ||||||||||||||||||||    
T  29727983 agtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 18413558 - 18413652
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttatttttt 215  Q
    ||||||| ||||||||||| |||||||||||| || || | ||||||||||  |||||||| | || || | | ||||||| |||||||||||||    
T  18413558 agtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgtgagtgattttatttttt 18413652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 26301919 - 26301965
Alignment:
Q  136 agagacggaaaacgtgaaatcactctctaattccgtcactaaatttt 182  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||||||    
T  26301919 agagagggaaaacgtgaaattgctctctaattccatcactaaatttt 26301965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 19345284 - 19345317
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctc 162  Q
    |||||||||||| |||||||||||||||||||||    
T  19345284 aaaatttagagagggaaaacgtgaaatcactctc 19345317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 31158690 - 31158634
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaa 178  Q
    ||||||| ||||||||||| | ||||||||||||  ||| |||||||||| ||||||    
T  31158690 agtgagggaaatttagagaagaaaaacgtgaaattcctccctaattccgtgactaaa 31158634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 6e-35; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 7830033 - 7830168
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||| |||||| |||||||||||||||| ||||| ||||| |||||| ||||||| |||||| ||    
T  7830033 agtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttccatc 7830132  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    || |||||||||||||||||||||||||||||||||    
T  7830133 ataaatttccctccctaattttgcttttcctagtag 7830168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 18895037 - 18894902
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||| ||||||| |||||||||| |||||||||||||||| |||||||||| ||||||  |||||||||||| ||||    
T  18895037 agtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcgtc 18894938  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| ||||||||||||||||||||||    
T  18894937 actaattttcctcgctaattttgcttttcctagtag 18894902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 50845467 - 50845332
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||| ||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  ||||||| |||||||||    
T  50845467 agtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtc 50845368  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||||||||||||||| |||||||    
T  50845367 acaaatttccctccctaattttgctttttctagtag 50845332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 12720811 - 12720953
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||||||||||||||||    
T  12720811 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccgtc 12720910  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaatat 263  Q
    |  |||||||||| |||||||||||||| ||||||| ||||||    
T  12720911 actaatttccctcgctaattttgctttttctagtagtgaatat 12720953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 38531307 - 38531172
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| || || ||| |||||||  |||||||||||||||||    
T  38531307 agtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccgtc 38531208  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |   |||||||||||||||||| ||||| |||||||    
T  38531207 acttatttccctccctaattttactttttctagtag 38531172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 12989854 - 12989994
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| |||| ||||||||||||||| ||| ||||||| ||||||||| ||||| ||||| ||| |||||||| |||||||||||||||||    
T  12989854 agtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccgtc 12989953  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    | ||||||| ||| ||||||||||||||  |||||| ||||    
T  12989954 accaatttctctctctaattttgctttttttagtagtgaat 12989994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 29549420 - 29549560
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| |||||||||||||||||||||||| || || ||| || |||||||| |||||||||||| ||||    
T  29549420 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcgtc 29549519  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    |  |||||||||| |||||||||||||| ||||||| ||||    
T  29549520 actaatttccctcgctaattttgctttttctagtagtgaat 29549560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 14760869 - 14761004
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||  ||||||| |||||||||    
T  14760869 agtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccgtc 14760968  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||  ||||||||||||| |||||||    
T  14760969 acaaatttccctctttaattttgctttttctagtag 14761004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 41752435 - 41752570
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||| | |||||||||||||||||    
T  41752435 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccgtc 41752534  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||| || |||||||||||||| |||||||    
T  41752535 actaatttccgtcactaattttgctttttctagtag 41752570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 52183680 - 52183815
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||||||||||||||||    
T  52183680 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtc 52183779  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    || ||||||||||  ||||||||||||| |||||||    
T  52183780 attaatttccctcgttaattttgctttttctagtag 52183815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 16258623 - 16258490
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    ||||||||||||||||||| | ||||||||||| | |||| |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||| |    
T  16258623 agtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccgcc 16258524  T
Q  221 atcaatttccctccctaattttgcttttcctagt 254  Q
    |  || || | ||| |||||||||||||||||||    
T  16258523 actaaattacatccttaattttgcttttcctagt 16258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 16913714 - 16913581
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||||||||||| | |||||||| | || || ||||| |||||  |||||||||||||||||    
T  16913714 agtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccgtc 16913615  T
Q  221 atcaatttccctccctaattttgcttttcctagt 254  Q
    |  ||||||||| |||||||||||||||||||||    
T  16913614 actaatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 6459219 - 6459354
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  6459219 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 6459318  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||| |||||| |||||||    
T  6459319 actaatttccctcgctaatttcgctttttctagtag 6459354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 9110112 - 9109977
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| ||||||||||||    
T  9110112 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtc 9110013  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  9110012 actaatttccctcgctaattttgctttttctagtag 9109977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 13102318 - 13102453
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| | ||||| || |||||||||||||||||||||||| ||||| ||| ||||||   ||||||| |||||||||    
T  13102318 agtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccgtc 13102417  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||| |||||||||||||||||||||    
T  13102418 acaaatttccctccttaattttgcttttcctagtag 13102453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 19081730 - 19081857
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||| |||||||| |||||||||||||| ||    
T  19081730 agtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatc 19081829  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| |||||||| |||||    
T  19081830 actaatttccctctctaattttactttt 19081857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 19129618 - 19129745
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||| |||||||| |||||||||||||| ||    
T  19129618 agtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatc 19129717  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| |||||||| |||||    
T  19129718 actaatttccctctctaattttactttt 19129745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 22603550 - 22603685
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| | ||||||| |||||||  |||| ||||||||| ||    
T  22603550 agtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttccatc 22603649  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  |||||||||||||| |||||||    
T  22603650 actaatttcccttgctaattttgctttttctagtag 22603685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 41063199 - 41063334
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || | ||||| | ||||| ||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||    
T  41063199 agtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccgtc 41063298  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||| | ||||||| ||||| |||||||    
T  41063299 actaattttccttcttaattttactttttctagtag 41063334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 45839294 - 45839429
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  45839294 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 45839393  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||  ||||||||||||| |||||||    
T  45839394 actaatttccctcgttaattttgctttttctagtag 45839429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 46786087 - 46785968
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| |||||||||||||||| |||||||||| ||||| ||| |||||||| |||| |||||||||||||  |||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  229 ccctccctaattttgctttt 248  Q
    ||||| ||||||||||||||    
T  46785987 ccctcgctaattttgctttt 46785968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 30928515 - 30928385
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    |||||||||||||||  ||  |||||| ||||||  |||||||||||  |||||||||||||| ||||| ||||| || |||||||||||||||||||||    
T  30928515 agtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtc 30928416  T
Q  221 atcaatttccctccctaattttgcttttcct 251  Q
    |  |||||||||| |||||||||||||||||    
T  30928415 actaatttccctctctaattttgcttttcct 30928385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 22789728 - 22789607
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| ||||||||||||||| || |||||||| ||||||||||||||| ||||  ||| |||||||| ||||||| |||||||||    
T  22789728 agtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccgtc 22789629  T
Q  221 atcaatttccctccctaatttt 242  Q
    |  ||||| |||||||||||||    
T  22789628 actaattttcctccctaatttt 22789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 13523098 - 13523002
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttcc 217  Q
    ||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||    
T  13523098 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttcc 13523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 19865253 - 19865381
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||| |||| |||||||||||||  ||||    
T  19865253 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatt 19865352  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||| |||||||| ||||| |||||||    
T  19865353 ttcctcgctaattttactttttctagtag 19865381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 28229585 - 28229457
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||||||| |||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  ||||    
T  28229585 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatt 28229486  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  28229485 tccctcgctaattttgctttttctagtag 28229457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 46790009 - 46790137
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| || ||||||||||||| |||||||||| ||||||||| |||||||  |||| |||||||||||||  ||||    
T  46790009 aaaaattagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatt 46790108  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  46790109 tccctcgctaattttgctttttctagtag 46790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 4340417 - 4340536
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||  |||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  229 ccctccctaattttgctttt 248  Q
    ||||  ||||||||||||||    
T  4340517 cccttgctaattttgctttt 4340536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 20408297 - 20408162
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| |||||||||||||| |||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  20408297 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtc 20408198  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| |||||||||||||| |||||||    
T  20408197 actaattttcctcgctaattttgctttttctagtag 20408162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 46865245 - 46865380
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| ||||| ||||| ||| ||||||||||| |||||||||||| | ||||||||||||  ||||  |||| ||||| ||||||||||||||||||    
T  46865245 agtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtc 46865344  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||| |||| ||||| |||||||    
T  46865345 actaatttccctccctagtttttctttttctagtag 46865380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 122 - 208
Target Start/End: Complemental strand, 14486769 - 14486683
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattgtgagagatttt 208  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| | |||||| |||| |||||||||    
T  14486769 agtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaagatttgtaagagatttt 14486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 27253955 - 27253857
Alignment:
Q  159 tctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||||||| ||||  ||||| |||||| ||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtag 27253857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 266
Target Start/End: Complemental strand, 41120866 - 41120729
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||  |||| ||||||||| |||  |||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  229 ccctccctaattttgcttttcctagtagggaatatata 266  Q
    ||||| |||||||||||||| ||| ||| | |||||||    
T  41120766 ccctcgctaattttgctttttctattagtgtatatata 41120729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 12161816 - 12161956
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  12161816 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 12161915  T
Q  221 atcaatttccctccctaattttgcttttcctagtagggaat 261  Q
    |  ||||| |||| |||||||| ||||| ||||||| ||||    
T  12161916 aataattttcctcgctaattttactttttctagtagtgaat 12161956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 39748942 - 39749070
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    ||||||||| || ||||||| ||||||| | ||| |||| |||||||||||||||| | |||| || ||| |||||||||| ||||||||||||  ||||    
T  39748942 aaaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaatt 39749041  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    || |||| |||||||||||||||||||||    
T  39749042 tcgctccttaattttgcttttcctagtag 39749070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 41071972 - 41071860
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||| ||||||    
T  41071972 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccgtc 41071873  T
Q  221 atcaatttccctc 233  Q
    |  ||||||||||    
T  41071872 actaatttccctc 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 6412190 - 6412055
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| |||| |||||||||||||||||||||| ||||| | | |||||||  |||| |||||||||||     
T  6412190 agtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtt 6412091  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  6412090 actaatttccctcgctaattttgctttttctagtag 6412055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 9259320 - 9259185
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||| ||||| |||||||||||    
T  9259320 agtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccgtc 9259221  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| ||||  |||||||| |||| |||||||    
T  9259220 actaattttcctcgttaattttgttttttctagtag 9259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 9464105 - 9464232
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  |||| ||||||||||||    
T  9464105 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtc 9464204  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||| || |||||||| |||||    
T  9464205 actaatttccgtcactaattttactttt 9464232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 15243087 - 15243222
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||||||||| || |||||||||||||||||||||||| | ||| ||| |||||||  |||| ||||||||||||    
T  15243087 agtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtc 15243186  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||| ||| || ||||| ||||| |||||||    
T  15243187 actaatttctctcgctgatttttctttttctagtag 15243222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 23457899 - 23458034
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| ||||||||||||    
T  23457899 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtc 23457998  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||| |||| |||||||| ||||| |||||||    
T  23457999 aataattttcctcgctaattttactttttctagtag 23458034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 46339562 - 46339447
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| || || ||| |||||||  |||| |||||||||||||  ||||| |||| ||||||    
T  46339562 ggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatt 46339463  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  46339462 ttgctttttctagtag 46339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 8941124 - 8940996
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||  ||||||||||||||| ||||||||| | | ||| ||||| |||||| |||| |||||||||||||  ||||    
T  8941124 aaaaattagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatt 8941025  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    |||||| |||||||||||||| |||||||    
T  8941024 tccctcgctaattttgctttttctagtag 8940996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 11917799 - 11917918
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccc 231  Q
    |||||||| |||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||| ||||| |||||| |||||   |||||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgtttttt-cgtcactgatttccc 11917897  T
Q  232 tccctaattttgcttttccta 252  Q
    || |||||||| |||||||||    
T  11917898 tctctaatttttcttttccta 11917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 17734091 - 17733955
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaatttt-gcaaccaaagaatt-gtgagagattttattttttccgt 219  Q
    ||||||| |||||||| || ||||||| ||||||| ||| |||||||| ||| |||||||| || |||||  |||| |||||||||||||| ||||||||    
T  17734091 agtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttccgt 17733992  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  || ||  ||||||||||||||||||||||||||    
T  17733991 cactaaattttctccctaattttgcttttcctagtag 17733955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 7181672 - 7181557
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaat-tgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||   ||| ||||||  ||||| ||||||||||||  |||||||||  ||||||    
T  7181672 ggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccgtcactaatttcccttgctaatt 7181573  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  7181572 ttgctttttctagtag 7181557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 9985464 - 9985329
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || | ||||||| ||||| |||||||||||||||| |||||||| | ||||||||| |||||||  |||| ||||||||||||    
T  9985464 agtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccgtc 9985365  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  ||||||||| |||| |||||||    
T  9985364 actaatttcccttgctaattttgttttttctagtag 9985329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 22158804 - 22158931
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||||||| ||||  | | |||||||  |||| |||||||| |||    
T  22158804 agtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctgtc 22158903  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| |||||||| |||||    
T  22158904 actaatttccctcgctaattttactttt 22158931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 48522540 - 48522655
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||  ||||  ||||||||||||||||||||| |||||| |||| |||||| ||||||||||||| ||||  ||||| |||| ||||||    
T  48522540 ggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctcgctaatt 48522639  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  48522640 ttgctttttctagtag 48522655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 25788105 - 25787999
Alignment:
Q  151 gaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttc 249  Q
    |||||| ||||||||||||||||||||||||||| ||||  ||| |||||||  ||||| ||||||||||||  ||||| |||| ||||||||||||||     
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgcttttt 25788006  T
Q  250 ctagtag 256  Q
    |||||||    
T  25788005 ctagtag 25787999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 26825253 - 26825374
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccc 231  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||| | | ||||||| ||||||| ||  |||||||||||||||  ||||| |     
T  26825253 tttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttct 26825352  T
Q  232 tccctaattttgcttttcctag 253  Q
    ||| ||| ||||||||| ||||    
T  26825353 tccataactttgctttttctag 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 51973428 - 51973561
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaaga-attgtgagagattttattttttccgtcat 222  Q
    ||||| |||||| | || |||||| |||||||  ||||||||||||||||||||||||||| |||| |||  || ||||  |||| ||||||||||| |     
T  51973428 tgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttac 51973527  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     |||||||||| |||||||||||||| |||||||    
T  51973528 taatttccctcgctaattttgctttttctagtag 51973561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 18788047 - 18787923
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||| ||| ||||||||||| |||| |||||||||  ||||||||||||||| |||||| || ||  ||| ||||||||||||| ||||    
T  18788047 agtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttatttttt-cgtc 18787951  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||| |||||||||||||||||    
T  18787950 actaatttccatccctaattttgctttt 18787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 6775925 - 6776015
Alignment:
Q  158 ctctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttccctccctaattttgctttt 248  Q
    ||||||||||||||  |||| |||||||||||||||| ||||||| ||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  6775925 ctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccatca-ctatttccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 12806952 - 12806833
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattt-tattttttccgtcatcaatttccctccctaattt 241  Q
    ||||| ||||||| |||| |||||||||||||||||||| | |||||  |||| ||||||||||| | ||||||| ||||  |||||||||||||||| |    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatat 12806853  T
Q  242 tgcttttcctagtagggaat 261  Q
    ||||||||||| ||| ||||    
T  12806852 tgcttttcctaatagtgaat 12806833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 17661052 - 17661179
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||||||||||  |||||||||||| |||||||||||||| ||||  | | |||||||  |||||||||||||||||    
T  17661052 agtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccgtc 17661151  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  ||||||| ||  |||||||||||||    
T  17661152 actaatttccgtcgttaattttgctttt 17661179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 18890686 - 18890559
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | ||  |||||||||||||| |||||||||||||| |||||||||||| ||||  | | |||||||  |||| ||||||||| ||    
T  18890686 agtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttccatc 18890587  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  18890586 actaatttccctcgctaattttgctttt 18890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 13308935 - 13308822
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||| ||||||| |||||||||| | |||||||||||||| |||||  |||| |||||  ||||||||||||| | ||  |||||||||| ||||||||    
T  13308935 aaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccctctctaatttt 13308836  T
Q  243 gcttttcctagtag 256  Q
    | ||||||||||||    
T  13308835 gtttttcctagtag 13308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 9177110 - 9177237
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || | ||||||| ||||| |||| ||||| |||||||||||||||| ||||| | | |||||||  |||| ||||||||||| |  |||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| ||||||||| |||| |||||||    
T  9177210 ccctcgctaattttgttttttctagtag 9177237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 29093691 - 29093556
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| ||||||||||| |||||| || ||||  |||||||||||| ||| |||||||||| |  || ||| |||||||  ||||||||||||| |||    
T  29093691 agtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcggtc 29093592  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
     | | ||||||||| ||||||| ||||| |||||||    
T  29093591 cttagtttccctccttaattttactttttctagtag 29093556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 50092415 - 50092300
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||||  | ||  | | |||||||  |||| |||||||||||||  |||||||||| ||||||    
T  50092415 ggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 50092316  T
Q  241 ttgcttttcctagtag 256  Q
    || ||||| |||||||    
T  50092315 tttctttttctagtag 50092300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 12174906 - 12174808
Alignment:
Q  119 atcagtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttc 216  Q
    |||||||||| | |||||| || ||||||| |||||||  |||||||||||||||||||||||||| || || ||| |||||||  |||||||||||||    
T  12174906 atcagtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttc 12174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 13195586 - 13195720
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||| |||||| |  ||||| ||||||||||| |||||||||||||||  || | ||||| |||||  ||||||  |||||| |||    
T  13195586 gtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatca 13195685  T
Q  222 tcaatttccctccctaattttgcttttcctagtag 256  Q
      ||| ||||||||||||||||| ||| |||||||    
T  13195686 ctaatctccctccctaattttgcattttctagtag 13195720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 17200106 - 17200012
Alignment:
Q  163 taattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||||||||||||||||| ||||| ||||| |||||  |||| |||||||||||||   ||||||||| ||||||||| |||| |||||||    
T  17200106 taattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactgatttccctcgctaattttgttttttctagtag 17200012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 41359020 - 41359090
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtca 221  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| |||||||||||||    
T  41359020 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtca 41359090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 20580922 - 20581039
Alignment:
Q  133 tttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgtcatcaatttcc 230  Q
    |||||||| ||||||||||||||| |||||||||| ||| | |||||||||| || || ||| |||||||| |||| | |||||||| |||  |||||||    
T  20580922 tttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttccatcactaatttcc 20581021  T
Q  231 ctccctaattttgctttt 248  Q
    ||| |||||||| |||||    
T  20581022 ctctctaattttactttt 20581039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 32046878 - 32046978
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||| ||| || ||||||||| ||||| ||||||||||||| ||||||||||||| ||||| | | |||||||  |||| ||||||||||||    
T  32046878 agtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtc 32046977  T
Q  221 a 221  Q
    |    
T  32046978 a 32046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 12370078 - 12370004
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt 196  Q
    ||||||| ||||||||  | ||||||| | |||||  |||||||||||||||||||||||||| |||||||||||    
T  12370078 agtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaatt 12370004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 20290436 - 20290397
Alignment:
Q  143 gaaaacgtgaaatcactctctaattccgtcactaaatttt 182  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  20290436 gaaaacgtgaaatcattctctaattccgtcactaaatttt 20290397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 49881053 - 49881176
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||| ||| ||||||| ||||||||| | || |||||||||||  ||||| ||| || ||| ||||||||||||||||||||  || |    
T  49881053 aaaaattagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaact 49881152  T
Q  228 tccctccctaattttgcttttccta 252  Q
    | ||| ||||||||||| |||||||    
T  49881153 ttcct-cctaattttgcatttccta 49881176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 45919011 - 45918909
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgtcatcaatttccctccctaattttgcttttc 249  Q
    ||||| ||||||||||| || |||||||||||||||||| ||| || |||| ||||| | ||||||||||||  | ||| ||| ||||||||||| ||||    
T  45919011 aaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcct-cctaattttgcatttc 45918913  T
Q  250 ctag 253  Q
    ||||    
T  45918912 ctag 45918909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 12369999 - 12369953
Alignment:
Q  210 ttttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    ||||||||||||  |||||||||| |||||||||||||| |||||||    
T  12369999 ttttttccgtcactaatttccctcgctaattttgctttttctagtag 12369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 25687409 - 25687355
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    ||||||||||| ||||||| | | ||| |||||||||||| ||||||||||||||    
T  25687409 aaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 58584 - 58719
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| | | || ||||  ||||||| |||||||||    
T  58584 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccgtc 58683  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||||||||||||||||||||||||||    
T  58684 acaaatttccctccctaattttgcttttcctagtag 58719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 10160 - 10292
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||  || ||||||| ||||||| ||||||||||||||||||||||||||| |  |||||| |||||||  ||||||| |||||||||    
T  10160 agtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccgtc 10259  T
Q  221 atcaatttccctccctaattttgcttttcctag 253  Q
    |  ||||||||||||||||||||||||||||||    
T  10260 acaaatttccctccctaattttgcttttcctag 10292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 9366 - 9231
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| |||||  |||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  9366 agtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 9267  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  9266 actaatttccctcactaattttgctttttctagtag 9231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 26485 - 26620
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||    
T  26485 agtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtc 26584  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||| || |||||||||||||| |||||||    
T  26585 actaatttccgtcactaattttgctttttctagtag 26620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 74678 - 74543
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| | | || ||||  ||||||| |||||||||    
T  74678 agtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccgtc 74579  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||||||||||||| |||||||||||||    
T  74578 acaaatttccctccctaattttacttttcctagtag 74543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 202776 - 202911
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    |||||||||||||||| || ||||||||| ||||  ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  202776 agtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccgtc 202875  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||| ||||| |||||||    
T  202876 actaatttccctcgctaatttttctttttctagtag 202911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 3746 - 3879
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcat 222  Q
    ||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| |||||||||||||     
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 3845  T
Q  223 caatttccctccctaattttgcttttcctagtag 256  Q
     ||||| |||| |||||||||||||| |||||||    
T  3846 taattttcctcgctaattttgctttttctagtag 3879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 276271 - 276209
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgc 184  Q
    ||||||| |||||| | ||  |||||||||||||| |||||||||||||||||||||||||||    
T  276271 agtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgc 276209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 274719 - 274667
Alignment:
Q  204 attttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||| |||||||||||||  |||||||||| ||||||||| |||| |||||||    
T  274719 atttcattttttccgtcactaatttccctcgctaattttgttttttctagtag 274667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 8247 - 8115
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||| ||  |||| ||||||||||||    
T  8247 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtc 8148  T
Q  221 atcaatttccctccctaattttgcttttcctag 253  Q
    || |||||||||| |||||||||||||| ||||    
T  8147 attaatttccctcgctaattttgctttttctag 8115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 21979 - 21847
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||| ||  |||| ||||||||||||    
T  21979 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccgtc 21880  T
Q  221 atcaatttccctccctaattttgcttttcctag 253  Q
    || |||||||||| |||||||||||||| ||||    
T  21879 attaatttccctcgctaattttgctttttctag 21847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 84305 - 84440
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || |||||| |||||||| ||||||||||||||||||||||||||  ||||  | | |||||||  |||| ||||||||||||    
T  84305 agtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccgtc 84404  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  |||||||||||||| |||||||    
T  84405 actaatttcccttgctaattttgctttttctagtag 84440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 6116 - 5981
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| |||||||||||| |||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  6116 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 6017  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| ||||||||| |||| |||||||    
T  6016 actaatttccctcgctaattttgttttttctagtag 5981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 19605 - 19740
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||  |||| ||||||||||||    
T  19605 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtc 19704  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||  |||||||||||||| |||||||    
T  19705 actaatttcccttgctaattttgctttttctagtag 19740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 119 - 248
Target Start/End: Complemental strand, 121127 - 120997
Alignment:
Q  119 atcagtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttcc 217  Q
    |||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| | | |||||||| |||||||||||| |    
T  121127 atcagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttc 121028  T
Q  218 gtcatcaatttccctccctaattttgctttt 248  Q
     | |  |||||||||| |||||||| |||||    
T  121027 ataactaatttccctctctaattttactttt 120997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 84804 - 84678
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||||||||| ||||| |||||||||||| |||||||||||||| ||||| ||| |||||||  |||| |||||||| ||||  ||||    
T  84804 aaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatt 84705  T
Q  228 tccctccctaattttgcttttcctagt 254  Q
    |||||| |||||||||||||| |||||    
T  84704 tccctcactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 1056 - 920
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagatttta-ttttttccgt 219  Q
    ||||||| | |||||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||| || ||||  |||||| ||||||||||    
T  1056 agtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttccgt 957  T
Q  220 catcaatttccctccctaattttgcttttcctagtag 256  Q
    ||  |||||||||| |||||||||||||| |||||||    
T  956 cagtaatttccctcgctaattttgctttttctagtag 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 7507 - 7642
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | || ||||  |||| || |||||||||    
T  7507 agtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccgtc 7606  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  |||||||||| |||||||||||||| |||||||    
T  7607 actaatttccctcgctaattttgctttttctagtag 7642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 22221 - 22348
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| || || ||| |||||||  |||| ||||||| |||||  |||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  22321 ccctcgctaattttgctttttctagtag 22348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 182562 - 182667
Alignment:
Q  152 aaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcc 250  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||  |||||||||| |||||||| ||||| |    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttttc 182661  T
Q  251 tagtag 256  Q
    ||||||    
T  182662 tagtag 182667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 219648 - 219773
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaatttcc 230  Q
    |||||| || ||||||| ||||||| |||||||||||||| |||||||||||| |  ||| || |||||||  |||| |||||||||||||  |||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 219747  T
Q  231 ctccctaattttgcttttcctagtag 256  Q
     || |||||||||||||| |||||||    
T  219748 gtcgctaattttgctttttctagtag 219773  T

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Target: scaffold0128 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 10792 - 10668
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||  ||||||||||||||||||||||||||| || || ||| |||||||  |||| |||||||||||||  |||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  229 ccctccctaattttgcttttcctag 253  Q
    ||||| |||||||||||||| ||||    
T  10692 ccctcgctaattttgctttttctag 10668  T

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Target: scaffold0062 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 43914 - 44054
Alignment:
Q  117 taatcagtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttatttttt 215  Q
    |||| |||||||||||||||| || ||||||||| ||||   ||||||||||||| | |||||||||| ||||||||| |||||||  |||| |||||||    
T  43914 taattagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcatttttt 44013  T
Q  216 ccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    || |||  |||||||||| |||||||| ||||| |||||||    
T  44014 ccatcactaatttccctcgctaatttttctttttctagtag 44054  T

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Target: scaffold0240 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 15119 - 14992
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | || ||||  |||| |||||||| ||||  |||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  229 ccctccctaattttgcttttcctagtag 256  Q
    ||||| |||||||||||||| |||||||    
T  15019 ccctcgctaattttgctttttctagtag 14992  T

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Target: scaffold0108 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 12655 - 12781
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa-ttgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || |||||||||||| || ||||||||||||||||||||||||||| |||| |||| || ||||  |||| ||||||||||||    
T  12655 agtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccgtc 12753  T
Q  221 atcaatttccctccctaattttgctttt 248  Q
    |  |||||||||| ||||||||||||||    
T  12754 actaatttccctcgctaattttgctttt 12781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 256
Target Start/End: Complemental strand, 37924 - 37789
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtc 220  Q
    ||||||| |||||| | || ||||||| ||||||| ||||||||||||||||||||||||||| |||| || | |||||||  |||||||||||||||||    
T  37924 agtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccgtc 37825  T
Q  221 atcaatttccctccctaattttgcttttcctagtag 256  Q
    |  ||||||||   ||||||||| |||| |||||||    
T  37824 actaatttcccctgctaattttgttttttctagtag 37789  T

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Target: scaffold0023 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 39820 - 39705
Alignment:
Q  142 ggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtcatcaatttccctccctaatt 240  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||  | | ||| |||  |||| ||||||||| |||  |||||||||| ||||||    
T  39820 ggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttccatcactaatttccctcgctaatt 39721  T
Q  241 ttgcttttcctagtag 256  Q
    |||||||| |||||||    
T  39720 ttgctttttctagtag 39705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 132 - 248
Target Start/End: Original strand, 173456 - 173574
Alignment:
Q  132 atttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaa---ttgtgagagattttattttttccgtcatcaattt 228  Q
    |||||| || ||||||| | ||||||||||||||||||||||||||||||||| |||||||||   || ||||| |||| |||||||||||||  |||||    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaattt 173555  T
Q  229 ccctccctaattttgctttt 248  Q
     |||| ||||||||||||||    
T  173556 -cctcgctaattttgctttt 173574  T

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Target: scaffold0035 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 74832 - 74720
Alignment:
Q  144 aaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaatttt 242  Q
    ||||| ||||||| ||||||||||| ||||||||||||| | |||| |||||| |||||| |||| |||||||||||||  |||||||||  ||||||||    
T  74832 aaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttcccttgctaatttt 74733  T
Q  243 gcttttcctagta 255  Q
    || ||| ||||||    
T  74732 gccttttctagta 74720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 3296 - 3172
Alignment:
Q  123 gtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaacca-aagaattgtgagagattttattttttccgtca 221  Q
    |||||| ||||||||||  ||||||||||||||| ||| ||||||| ||||||||||||||| ||||  | | |||||||  | ||||| ||||||||||    
T  3296 gtgagggaaatttagag--ggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtca 3199  T
Q  222 tcaatttccctccctaattttgctttt 248  Q
      ||||||||||||||||||| |||||    
T  3198 ctaatttccctccctaatttttctttt 3172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 10894 - 11025
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtc 220  Q
    ||||||| |||||||  || | ||||| ||||||  ||||||||||| ||||||||||||||  ||||| ||||| |||||  ||||||| |||| ||||    
T  10894 agtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcgtc 10993  T
Q  221 atcaatttccctccctaattttgcttttccta 252  Q
    |  ||||||| |||||||||||||||||||||    
T  10994 acaaatttccttccctaattttgcttttccta 11025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 6805 - 6931
Alignment:
Q  130 aaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaattt 228  Q
    |||||||| || ||||||| ||||||  |||||||||||||||| ||||||||||||| || | | ||| ||   |||| |||||||||||||  |||||    
T  6805 aaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaataattt 6904  T
Q  229 ccctccctaattttgcttttcctagta 255  Q
    ||||| |||||||||||||| ||||||    
T  6905 ccctcgctaattttgctttttctagta 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 112330 - 112398
Alignment:
Q  122 agtgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa 190  Q
    ||||||||||||| ||||| | ||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  112330 agtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 7460 - 7592
Alignment:
Q  124 tgaggaaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaaga-attgtgagagattttattttttccgtcat 222  Q
    ||||| |||||||| || ||||||||||||||| ||||||||||| ||||||||| ||||| || || ||  ||||||   |||| |||||||||||||     
T  7460 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcac 7559  T
Q  223 caatttccctccctaattttgcttttcctagta 255  Q
     ||||| ||||  ||||||| ||||| ||||||    
T  7560 taattttcctcgttaattttactttttctagta 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 19268 - 19168
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || ||| ||| ||||||| ||||||||||  ||  ||||||||||| ||||| | |||| ||||||||||||||||||||||||| ||||    
T  19268 aaaaattagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaatt 19169  T
Q  228 t 228  Q
    |    
T  19168 t 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 439972 - 440100
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaa-agaattgtgagagattttattttttccgtcatcaatt 227  Q
    |||| |||| || |||||| || ||||| ||||||||||||||||||||||||||| | ||| | | |||||||  |||| |||||||||||||  |||     
T  439972 aaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaata 440071  T
Q  228 tccctccctaattttgcttttcctagtag 256  Q
    | |||  |||||||| ||||| |||||||    
T  440072 ttccttgctaattttactttttctagtag 440100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 17705 - 17619
Alignment:
Q  171 tcactaaattttgcaaccaaagaatt-gtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||| ||||| ||||| ||||| |||||  |||| |||||||||||||  |||||||||| ||||||||| |||| |||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtag 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 34222 - 34279
Alignment:
Q  195 ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttccta 252  Q
    |||||||| |||||||||||||| |||| |||||| |||| | |||||||||||||||    
T  34222 ttgtgagaaattttattttttccctcattaatttcgctccttgattttgcttttccta 34279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 22169 - 22223
Alignment:
Q  198 tgagagattttattttttccgtcatcaatttccctccctaattttgcttttccta 252  Q
    ||||| |||||||||||||| |||  ||||||||||||| |||||| ||||||||    
T  22169 tgagaaattttattttttccctcactaatttccctccctgattttgtttttccta 22223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 9886 - 9947
Alignment:
Q  195 ttgtgagagattttattttttccgtcatcaatttccctccctaattttgcttttcctagtag 256  Q
    |||||||| |||| ||||||||| |||  |||||| ||| |||||||||||||| |||||||    
T  9886 ttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtag 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 1649 - 1556
Alignment:
Q  129 aaaatttagagacggaaaacgtgaaatcactctctaattccgtcactaaattttgcaaccaaagaattg-tgagagattttattttttccgtca 221  Q
    |||| |||| || ||| ||| ||||| | ||||||||||  || |||||||||||| ||||| |||||  |||| |||||||||||||||||||    
T  1649 aaaaattagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtca 1556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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