View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6668_high_10 (Length: 240)
Name: NF6668_high_10
Description: NF6668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6668_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 61 - 221
Target Start/End: Complemental strand, 47117944 - 47117784
Alignment:
| Q |
61 |
taattgatgaattcaataagtaatttatttattttgaacgagtaagtaaaactttaaaacgatgaactttatatgaaaaaatataaagaatctattgaaa |
160 |
Q |
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| T |
47117944 |
taattgatgaattcaataagtaatttatttattttgaacgagtaagtaaaactttaaaacgatgaactttatatgaaaaaatataaagaatctattgaaa |
47117845 |
T |
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| Q |
161 |
ctttatttaaattgagattgaagaagccaattaccactggtgcgggggaacgaggtcttgc |
221 |
Q |
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| T |
47117844 |
ctttatttaaattgagattgaagaagccaattaccactggtgcgggggaacgaggtcttgc |
47117784 |
T |
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