View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6671_high_3 (Length: 278)
Name: NF6671_high_3
Description: NF6671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6671_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 48231112 - 48231375
Alignment:
| Q |
1 |
atggttcggctctacagtctgtggcccctgctaattgccttagctcgatggaagtaagtaaaatacatagattccatttgaatctcaagaagtttatggt |
100 |
Q |
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| T |
48231112 |
atggttcggctctacagtctgtggcccctgctaattgccttagctcgatggaagtaagtaaaata----gattccatttgaatctcaagaagtttatggt |
48231207 |
T |
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| Q |
101 |
ttttaacatattaggtcaccagaaaaataaatatgaatgaatgaacatgtaaatacgaatttgaacaaggatatgaagcattaaaattgatttgaggaaa |
200 |
Q |
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| T |
48231208 |
ttttaacatattaggtcaccagaaaaataaatatgaatgaatgaacatgtaaatacgaatttgaacaaggatatgaagcattaaaattgatttgaggaaa |
48231307 |
T |
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| Q |
201 |
atctgcatcttaatttgtaagccatgagggatttaccgttgatgaaccttctgaggcatttttgatga |
268 |
Q |
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| T |
48231308 |
atctgcatcttaatttgtaaaccatgagggatttaccgttgatgaaccttctgaggcatttttaatga |
48231375 |
T |
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