View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6671_high_5 (Length: 238)
Name: NF6671_high_5
Description: NF6671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6671_high_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 48231576 - 48231352
Alignment:
| Q |
14 |
atcagagctttcactattgctatattcaacgcatcctgttcttcaagacgccagctatggtcgagaaccttgactaactctctggatgactcttgtgtaa |
113 |
Q |
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| T |
48231576 |
atcagagctttcactattgctatattcaacgcatcctgttcttcaagacgccagctacggtcgagaaccttgactaactctctggatgactcttgtgtaa |
48231477 |
T |
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| Q |
114 |
cctgttttatgaaaaataacacattcatcttattataccggatgaaagggtaaaagtatcattttaaaaaccatctggtttacatacacttttaaagaca |
213 |
Q |
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| T |
48231476 |
cctgttttatgaaaaataacacattcatcttattataccggatgaaagggtaaaagtatcattttaaaaaccatctggtttacatacacttttaaagact |
48231377 |
T |
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| Q |
214 |
ttcattaaaaatgcctcagaaggtt |
238 |
Q |
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| T |
48231376 |
ttcattaaaaatgcctcagaaggtt |
48231352 |
T |
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