View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6672_low_8 (Length: 232)
Name: NF6672_low_8
Description: NF6672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6672_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1451069 - 1450852
Alignment:
| Q |
1 |
accttctatgaagggttggagaggacactcaatcgtgtagtagacttagacgtagagnnnnnnn-ggcagcagtaaattatttatttgaaacaggttaca |
99 |
Q |
| |
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| T |
1451069 |
accttctatgaagggttggagaggacactcaatcgtgtagtagacttagacgtagaaaaaaaaaaggcagcagtaaattatttatttgaaacaggttaca |
1450970 |
T |
|
| Q |
100 |
aatacacacctaaagtcaagagcagtaaatataaaacagcaacaatagctacagtatcttgtcacacaagaaaacattatttacacttacagcaccatga |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
1450969 |
aatacacacctaaagtcaagagcagtaaatataaaacagcaacaatagctacagtatcttgtcacacaagaaaacattatttacacttacagcaccatga |
1450870 |
T |
|
| Q |
200 |
tatgattctatacatatg |
217 |
Q |
| |
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|||||||||||||||||| |
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|
| T |
1450869 |
tatgattctatacatatg |
1450852 |
T |
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