View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6676_low_13 (Length: 244)
Name: NF6676_low_13
Description: NF6676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6676_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 35255109 - 35254901
Alignment:
| Q |
16 |
attatactgcagatgttcaagcatattaattaaataaagaaaatacnnnnnnnngaacaagtaaataaagaaaatactattcggttgaagcagaagataa |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35255109 |
attatactgcagatgttcaagcatattaattaaataaagaaaatacttttttttgaacaagtaaataaagaaaatactattcggttgaagcagaagataa |
35255010 |
T |
|
| Q |
116 |
ggctgactgccaagatagtaaggagaaatataaattttgacctgtcctttaacaggctggtgcccattccaaaacacataagtttcgattacatctacac |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35255009 |
ggctgactgccaagatagtaaggagaaatataaattttgacctgtcctttaacaggctggtgcccattccaaaacacataagtttcgattacatctacac |
35254910 |
T |
|
| Q |
216 |
caccttcct |
224 |
Q |
| |
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||||||||| |
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|
| T |
35254909 |
caccttcct |
35254901 |
T |
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