View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6681_2D_high_33 (Length: 231)
Name: NF6681_2D_high_33
Description: NF6681_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6681_2D_high_33 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 7020499 - 7020296
Alignment:
| Q |
1 |
taaggaaccaaagtggctccttgcatccttcttactcagcaatttttcaagaaaatgacaaattggtgtggcagtaattctgacaatatttattagtccg |
100 |
Q |
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| T |
7020499 |
taaggaaccaaagtggctccttgcatccttcttactcagcaatttttcaagaaaatgacaaattggtgtggcagtaattctgacaatatttattagtccg |
7020400 |
T |
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| Q |
101 |
taccaatgatcatggtttttgtacacttgtattagctagatttgtcacatttgatgttcctatattcttttgatcataaaactattaaaacaaatgaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
7020399 |
taccaatgatcatggtttttgtacacttgtattagctagatttgtcacatttgatgttcctatattgttttgatcataaaactattaaaacaaatgaaac |
7020300 |
T |
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| Q |
201 |
tatt |
204 |
Q |
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|||| |
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| T |
7020299 |
tatt |
7020296 |
T |
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