View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6682_2D_low_2 (Length: 1020)

Name: NF6682_2D_low_2
Description: NF6682_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6682_2D_low_2
NF6682_2D_low_2
[»] chr6 (28 HSPs)
chr6 (697-1006)||(30936975-30937283)
chr6 (14-132)||(13727399-13727517)
chr6 (14-132)||(21479482-21479600)
chr6 (14-132)||(19737692-19737810)
chr6 (14-132)||(21280533-21280651)
chr6 (14-132)||(24710999-24711117)
chr6 (14-132)||(27788688-27788806)
chr6 (14-124)||(33774105-33774215)
chr6 (14-124)||(28075771-28075881)
chr6 (19-132)||(20711720-20711833)
chr6 (14-132)||(30832524-30832642)
chr6 (14-124)||(17353942-17354052)
chr6 (34-132)||(1155849-1155947)
chr6 (14-132)||(34397845-34397963)
chr6 (590-826)||(31005652-31005905)
chr6 (272-361)||(31006040-31006130)
chr6 (14-120)||(235236-235343)
chr6 (52-132)||(27314178-27314259)
chr6 (30-121)||(21183686-21183777)
chr6 (30-124)||(2477592-2477686)
chr6 (30-124)||(6159442-6159536)
chr6 (590-689)||(30937403-30937502)
chr6 (30-124)||(20611794-20611888)
chr6 (277-343)||(30937843-30937909)
chr6 (374-459)||(30937688-30937778)
chr6 (31-109)||(4036953-4037031)
chr6 (47-124)||(30121783-30121860)
chr6 (457-501)||(30937618-30937662)
[»] chr4 (52 HSPs)
chr4 (14-132)||(38209590-38209708)
chr4 (14-132)||(10978890-10979008)
chr4 (14-132)||(32915375-32915493)
chr4 (14-132)||(34768573-34768691)
chr4 (14-132)||(37514649-37514767)
chr4 (14-124)||(47128977-47129087)
chr4 (18-132)||(54780771-54780885)
chr4 (17-132)||(43455530-43455645)
chr4 (14-132)||(48209230-48209348)
chr4 (14-131)||(5128842-5128959)
chr4 (14-123)||(13460197-13460306)
chr4 (14-132)||(1105522-1105640)
chr4 (14-132)||(32128574-32128692)
chr4 (14-124)||(34027569-34027679)
chr4 (14-124)||(37777230-37777340)
chr4 (21-124)||(2790748-2790851)
chr4 (14-132)||(19498494-19498610)
chr4 (14-120)||(54083253-54083359)
chr4 (14-124)||(10428204-10428322)
chr4 (14-118)||(40089506-40089609)
chr4 (14-132)||(16845011-16845130)
chr4 (14-132)||(35779325-35779442)
chr4 (14-124)||(16882402-16882512)
chr4 (14-124)||(35465097-35465206)
chr4 (56-132)||(17679432-17679508)
chr4 (30-112)||(4167910-4167992)
chr4 (14-132)||(55255259-55255365)
chr4 (14-120)||(24969427-24969523)
chr4 (30-124)||(52468292-52468386)
chr4 (14-83)||(23509846-23509915)
chr4 (52-132)||(51964736-51964819)
chr4 (14-120)||(38352276-38352372)
chr4 (30-124)||(27112036-27112130)
chr4 (30-124)||(36118465-36118559)
chr4 (70-132)||(51691914-51691976)
chr4 (51-132)||(16922328-16922409)
chr4 (36-124)||(36178684-36178772)
chr4 (60-132)||(9578663-9578736)
chr4 (30-118)||(24396940-24397028)
chr4 (30-121)||(2135331-2135422)
chr4 (30-124)||(37744916-37745011)
chr4 (53-124)||(39655261-39655332)
chr4 (30-124)||(10042007-10042101)
chr4 (31-124)||(39329399-39329492)
chr4 (38-116)||(36362886-36362964)
chr4 (30-124)||(45656181-45656275)
chr4 (30-119)||(40217238-40217327)
chr4 (78-129)||(23508512-23508564)
chr4 (74-118)||(29425187-29425231)
chr4 (76-123)||(15735142-15735189)
chr4 (89-124)||(24614018-24614053)
chr4 (91-124)||(30507129-30507162)
[»] chr3 (35 HSPs)
chr3 (14-132)||(47467672-47467790)
chr3 (14-132)||(54619203-54619321)
chr3 (14-132)||(42098789-42098907)
chr3 (14-124)||(21582759-21582869)
chr3 (14-132)||(53149314-53149432)
chr3 (14-124)||(3953904-3954014)
chr3 (14-124)||(27078577-27078687)
chr3 (14-124)||(27084374-27084484)
chr3 (14-132)||(38681093-38681211)
chr3 (14-124)||(34290644-34290754)
chr3 (14-132)||(36716025-36716143)
chr3 (14-124)||(44708465-44708575)
chr3 (18-124)||(37168359-37168465)
chr3 (14-132)||(43207238-43207355)
chr3 (14-124)||(53506892-53507002)
chr3 (14-124)||(8073346-8073455)
chr3 (14-124)||(54407166-54407275)
chr3 (14-132)||(18372467-18372589)
chr3 (14-132)||(9878687-9878805)
chr3 (14-120)||(50939245-50939351)
chr3 (16-97)||(29620423-29620504)
chr3 (25-132)||(50258623-50258731)
chr3 (34-130)||(36605973-36606069)
chr3 (35-124)||(28689369-28689458)
chr3 (30-124)||(8420330-8420424)
chr3 (30-124)||(54574835-54574929)
chr3 (30-124)||(32319163-32319257)
chr3 (14-120)||(48157127-48157223)
chr3 (35-124)||(49393099-49393187)
chr3 (70-121)||(23641329-23641380)
chr3 (30-124)||(25855426-25855519)
chr3 (47-124)||(26279563-26279640)
chr3 (30-121)||(789940-790031)
chr3 (73-124)||(42453451-42453502)
chr3 (30-124)||(52374660-52374754)
[»] chr1 (40 HSPs)
chr1 (14-132)||(5316676-5316794)
chr1 (14-132)||(14146296-14146414)
chr1 (14-132)||(6771787-6771905)
chr1 (14-132)||(23185423-23185541)
chr1 (14-132)||(3406414-3406532)
chr1 (14-132)||(3440288-3440406)
chr1 (14-132)||(44655737-44655855)
chr1 (14-132)||(4971617-4971735)
chr1 (14-132)||(5027545-5027663)
chr1 (14-124)||(9173030-9173140)
chr1 (14-124)||(9181012-9181122)
chr1 (14-131)||(1366878-1366995)
chr1 (16-124)||(27559635-27559743)
chr1 (18-132)||(16140055-16140169)
chr1 (14-132)||(41697136-41697254)
chr1 (14-132)||(50881426-50881544)
chr1 (14-120)||(19955713-19955819)
chr1 (14-124)||(17168952-17169062)
chr1 (14-120)||(40501801-40501907)
chr1 (39-132)||(21740936-21741029)
chr1 (14-124)||(51607446-51607557)
chr1 (14-120)||(13913491-13913599)
chr1 (30-124)||(38547043-38547137)
chr1 (14-132)||(27906728-27906834)
chr1 (41-132)||(6889634-6889725)
chr1 (41-132)||(6891480-6891571)
chr1 (35-123)||(38853539-38853627)
chr1 (14-120)||(44895648-44895748)
chr1 (30-124)||(39134729-39134824)
chr1 (30-124)||(45758506-45758600)
chr1 (43-124)||(35392295-35392375)
chr1 (53-132)||(22865460-22865538)
chr1 (32-110)||(5533326-5533404)
chr1 (30-118)||(26803960-26804045)
chr1 (30-124)||(43235775-43235871)
chr1 (30-124)||(33170771-33170865)
chr1 (30-124)||(50146308-50146402)
chr1 (30-124)||(6221690-6221783)
chr1 (70-124)||(17322630-17322684)
chr1 (33-109)||(10925976-10926052)
[»] chr8 (33 HSPs)
chr8 (14-132)||(30883314-30883432)
chr8 (14-132)||(45475802-45475920)
chr8 (14-132)||(2952221-2952339)
chr8 (14-132)||(13534687-13534804)
chr8 (14-132)||(13624227-13624344)
chr8 (14-132)||(5860744-5860862)
chr8 (14-132)||(23606629-23606747)
chr8 (14-132)||(23798261-23798379)
chr8 (14-132)||(37430158-37430276)
chr8 (14-120)||(10917376-10917482)
chr8 (14-120)||(42600767-42600873)
chr8 (14-132)||(3048517-3048635)
chr8 (14-124)||(41879166-41879276)
chr8 (30-124)||(7944530-7944624)
chr8 (30-124)||(8102913-8103007)
chr8 (30-110)||(5942697-5942777)
chr8 (30-124)||(5721560-5721654)
chr8 (30-124)||(5973115-5973209)
chr8 (30-124)||(11290185-11290279)
chr8 (30-124)||(39332413-39332507)
chr8 (35-132)||(34789862-34789959)
chr8 (30-124)||(15078759-15078853)
chr8 (30-124)||(15167423-15167517)
chr8 (30-124)||(25561503-25561595)
chr8 (30-124)||(41677181-41677276)
chr8 (38-124)||(8646215-8646300)
chr8 (53-124)||(30674411-30674482)
chr8 (30-124)||(14509991-14510084)
chr8 (53-124)||(23941099-23941170)
chr8 (86-124)||(34868185-34868223)
chr8 (87-124)||(9108551-9108588)
chr8 (72-102)||(5757123-5757153)
chr8 (33-124)||(34048713-34048806)
[»] chr7 (34 HSPs)
chr7 (14-132)||(8171538-8171656)
chr7 (14-132)||(10955469-10955587)
chr7 (14-132)||(12596286-12596404)
chr7 (14-132)||(18776765-18776883)
chr7 (14-132)||(29077205-29077323)
chr7 (14-120)||(20091292-20091398)
chr7 (14-124)||(24525692-24525802)
chr7 (14-120)||(48983855-48983961)
chr7 (14-124)||(10329417-10329527)
chr7 (14-132)||(38414875-38414993)
chr7 (14-120)||(23551081-23551188)
chr7 (18-124)||(47984976-47985083)
chr7 (14-132)||(19692079-19692197)
chr7 (33-119)||(9021812-9021898)
chr7 (34-132)||(28749715-28749812)
chr7 (51-132)||(26254015-26254096)
chr7 (14-124)||(8239670-8239782)
chr7 (52-132)||(33162338-33162418)
chr7 (33-124)||(23859077-23859168)
chr7 (30-124)||(2611269-2611363)
chr7 (30-124)||(7398452-7398546)
chr7 (30-124)||(36891579-36891673)
chr7 (14-75)||(25010418-25010479)
chr7 (41-124)||(6765688-6765771)
chr7 (30-124)||(12981327-12981421)
chr7 (41-124)||(23744808-23744891)
chr7 (34-124)||(20153206-20153296)
chr7 (30-124)||(27237430-27237524)
chr7 (33-124)||(36902931-36903022)
chr7 (46-123)||(21763595-21763672)
chr7 (30-118)||(9014782-9014863)
chr7 (30-124)||(12419502-12419596)
chr7 (30-120)||(18201138-18201228)
chr7 (31-109)||(38971255-38971333)
[»] chr5 (41 HSPs)
chr5 (14-132)||(19523184-19523302)
chr5 (14-132)||(34756363-34756481)
chr5 (14-132)||(30854314-30854432)
chr5 (14-132)||(36187876-36187994)
chr5 (14-132)||(2274875-2274993)
chr5 (14-132)||(15480086-15480204)
chr5 (14-132)||(27078996-27079114)
chr5 (14-132)||(28822339-28822457)
chr5 (14-124)||(9364276-9364386)
chr5 (14-132)||(16592071-16592189)
chr5 (14-132)||(38869360-38869478)
chr5 (14-124)||(16198799-16198909)
chr5 (14-124)||(16799332-16799442)
chr5 (34-132)||(31194609-31194706)
chr5 (18-124)||(40389541-40389647)
chr5 (14-119)||(27924067-27924172)
chr5 (14-124)||(7670909-7671020)
chr5 (27-132)||(23284059-23284164)
chr5 (29-132)||(22986555-22986658)
chr5 (34-132)||(31881431-31881528)
chr5 (51-132)||(7338021-7338102)
chr5 (32-124)||(36868881-36868973)
chr5 (30-124)||(2530902-2530996)
chr5 (30-124)||(14318390-14318484)
chr5 (33-124)||(2024647-2024738)
chr5 (33-124)||(26718954-26719045)
chr5 (33-124)||(26988698-26988789)
chr5 (30-124)||(34425904-34425998)
chr5 (30-124)||(1366531-1366625)
chr5 (30-124)||(2412089-2412183)
chr5 (30-124)||(33037781-33037875)
chr5 (31-124)||(24395741-24395834)
chr5 (38-124)||(10543682-10543768)
chr5 (32-124)||(10407464-10407556)
chr5 (30-110)||(41911636-41911716)
chr5 (41-124)||(22648741-22648824)
chr5 (30-124)||(11242323-11242417)
chr5 (30-124)||(40794332-40794426)
chr5 (30-110)||(15639644-15639724)
chr5 (86-124)||(606211-606249)
chr5 (42-124)||(17344969-17345051)
[»] chr2 (32 HSPs)
chr2 (14-132)||(3155201-3155319)
chr2 (14-132)||(4505878-4505996)
chr2 (14-132)||(6964991-6965109)
chr2 (14-132)||(7162768-7162886)
chr2 (14-132)||(3952990-3953108)
chr2 (14-132)||(12337448-12337566)
chr2 (14-124)||(8907087-8907197)
chr2 (14-132)||(10762565-10762683)
chr2 (14-132)||(29939862-29939980)
chr2 (14-124)||(24410420-24410531)
chr2 (18-124)||(9046017-9046124)
chr2 (18-132)||(26716116-26716231)
chr2 (14-120)||(27506752-27506858)
chr2 (46-132)||(34693991-34694077)
chr2 (46-132)||(34716403-34716489)
chr2 (30-124)||(16097008-16097102)
chr2 (56-132)||(40636164-40636240)
chr2 (32-124)||(24035553-24035645)
chr2 (30-124)||(38400798-38400892)
chr2 (56-132)||(5952717-5952791)
chr2 (30-124)||(13800552-13800647)
chr2 (30-124)||(12134048-12134142)
chr2 (30-124)||(21665708-21665802)
chr2 (30-124)||(28425718-28425812)
chr2 (30-124)||(7742141-7742236)
chr2 (30-121)||(16227379-16227470)
chr2 (30-99)||(37182670-37182739)
chr2 (30-124)||(11912765-11912859)
chr2 (36-104)||(22727530-22727598)
chr2 (53-124)||(42029168-42029239)
chr2 (86-120)||(8327674-8327708)
chr2 (86-124)||(10252472-10252510)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-132)||(1328-1446)
[»] scaffold0039 (1 HSPs)
scaffold0039 (14-124)||(106523-106633)
[»] scaffold1590 (1 HSPs)
scaffold1590 (30-124)||(266-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (30-124)||(206497-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-124)||(173518-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (30-124)||(38926-39020)
[»] scaffold0182 (1 HSPs)
scaffold0182 (32-121)||(24004-24093)
[»] scaffold0007 (1 HSPs)
scaffold0007 (31-124)||(230867-230960)
[»] scaffold0001 (2 HSPs)
scaffold0001 (14-79)||(181904-181969)
scaffold0001 (75-132)||(183106-183163)
[»] scaffold1320 (1 HSPs)
scaffold1320 (30-124)||(1355-1449)
[»] scaffold0022 (2 HSPs)
scaffold0022 (30-124)||(40086-40182)
scaffold0022 (30-124)||(138146-138242)
[»] scaffold0227 (2 HSPs)
scaffold0227 (87-124)||(16123-16160)
scaffold0227 (30-97)||(16028-16095)
[»] scaffold0003 (1 HSPs)
scaffold0003 (53-106)||(351360-351413)


Alignment Details
Target: chr6 (Bit Score: 162; Significance: 6e-86; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 697 - 1006
Target Start/End: Complemental strand, 30937283 - 30936975
Alignment:
Q  697 ggtgattgagtaattatcatagtttatatttgtcacataatatgtgtcacttagatgattaattatgattttgttttcagagcattctaggccacaaaca 796  Q
    |||||| || |||||| ||||||| ||||||||||||||||| | || || | || ||||||||||| |||| ||||||||||||||||||||| ||| |    
T  30937283 ggtgatggaataattagcatagttcatatttgtcacataatacg-gttacatggaagattaattatgcttttcttttcagagcattctaggccaaaaata 30937185  T
Q  797 gggtaaccacaaaattgatctctagcattggacaattagaatgaggacaaagtgttgataagttggagctattgatcggcatgacaagatgttacaagga 896  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||  |||||||||| ||| ||||| |||  ||||||||||||    
T  30937184 gggtaaccacaaaattgatctctagcattggaccattagaatgaggacatagtgccgatattttggagctatcgataggcataacatcatgttacaagga 30937085  T
Q  897 tgatgggtaatgcgaacagggttggaagggttttgacatagtttagtgagtatacagacaaatactaaaattataatttgggtaataatgcatttgattg 996  Q
    || ||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| || | ||||| ||||||| ||||||||||||||||    
T  30937084 tggtggataatgcaaacagggttggaagcgttttgacatagtttagtgagtatatagacaaatattagacttatagtttgggttataatgcatttgattg 30936985  T
Q  997 agataatact 1006  Q
    |||| |||||    
T  30936984 agatgatact 30936975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 13727517 - 13727399
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13727517 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 13727418  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  13727417 aaatagaacattgctcttt 13727399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 21479482 - 21479600
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21479482 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21479581  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  21479582 aaatagaacattgctcttt 21479600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 19737810 - 19737692
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  19737810 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatat 19737711  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  19737710 aaatagaacattgctcttt 19737692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 21280533 - 21280651
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21280533 tttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21280632  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  21280633 aaatagaacattgctcttt 21280651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 24711117 - 24710999
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  24711117 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 24711018  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||| ||||||    
T  24711017 aaatagaacatcactcttt 24710999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 27788806 - 27788688
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  27788806 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27788707  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||| || |||||||    
T  27788706 aaatagaaaattgctcttt 27788688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 33774105 - 33774215
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33774105 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 33774204  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  33774205 aaatagaacat 33774215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 28075771 - 28075881
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  28075771 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatat 28075870  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  28075871 aaatagaacat 28075881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 20711833 - 20711720
Alignment:
Q  19 tgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaata 20711734  T
Q  119 gaacatcgctcttt 132  Q
    |||||| |||||||    
T  20711733 gaacattgctcttt 20711720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 30832642 - 30832524
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||| ||||||||||| |    
T  30832642 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgt 30832543  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||| ||||    
T  30832542 aaatagaacatcgcgcttt 30832524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 17353942 - 17354052
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  17353942 tttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 17354041  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  17354042 aaatagaacat 17354052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 1155947 - 1155849
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 34397845 - 34397963
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| |||| |||||||||||| |||| |||||||||| |||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  34397845 tttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatat 34397944  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  34397945 aaatagaacattgctcttt 34397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 590 - 826
Target Start/End: Complemental strand, 31005905 - 31005652
Alignment:
Q  590 aactacaattgaagtagaaactaacattcgaataaaatttgcgaaaagacaaagtaaggtttgaaagtgtaacattttttcttgctctaggacatttttt 689  Q
    ||||||||||||| |||||||||| |||| |||  |||  || ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||     
T  31005905 aactacaattgaaatagaaactaagattcaaatctaatgagctaaaagacaatggaagatttgaaagtgtaacattttttcttgctctaggacatttttg 31005806  T
Q  690 atc-----------------ctagggtgattgagtaattatcatagtttatatttgtcacataatatgtgtcacttagatgattaattatgattttgttt 772  Q
    |||                 | ||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| || || | ||||||  ||||| |    
T  31005805 atctaatatatctatgtcaacaagggtaattgaataagtatcatagtctatatttgtcacataatatgtgtcacttggaagagtgattatggctttgtct 31005706  T
Q  773 tcagagcattctaggccacaaacagggtaaccacaaaattgatctctagcattg 826  Q
    | ||||||||| |||||| || |||| |||||||| |||||||| |||| ||||    
T  31005705 tgagagcattcaaggccaaaatcaggataaccacataattgatcactaggattg 31005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 31006130 - 31006040
Alignment:
Q  272 aattcagcacaaacccttttttcatagttgaaccaattccattaatcaaaccaccaacaacattatttaactcatcactctt-acaatcac 361  Q
    |||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  31006130 aattaagcacaaacccttttttcatagctgaaccaaatccatttatcaaaccaccaacaacatcatttaactcatcactcttcacaatcac 31006040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 235343 - 235236
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatata--cggcaccttgtatttatcttttaaaaaat 111  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| || ||||| ||| | |||||||  ||||||||| |||||||||||||||||||    
T  235343 tttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaat 235245  T
Q  112 ataaataga 120  Q
    |||||||||    
T  235244 ataaataga 235236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 27314259 - 27314178
Alignment:
Q  52 cattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttt 27314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    |||||||||||||||||||||| ||||||| || ||||| |||| ||||||||||  || |||||||||||||||||||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 2477686 - 2477592
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||| | | ||| || |||||||||| | |||||||||||||||||||||||||| ||||| ||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacat 2477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 6159442 - 6159536
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||| || ||||||||||| |||| ||||| ||  | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacat 6159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 590 - 689
Target Start/End: Complemental strand, 30937502 - 30937403
Alignment:
Q  590 aactacaattgaagtagaaactaacattcgaataaaatttgcgaaaagacaaagtaaggtttgaaagtgtaacattttttcttgctctaggacatttttt 689  Q
    |||||||||||||||||| ||||| |||   || |||||||| |||||| |||| ||||||||||||||||||||||||||||| || | ||||||||||    
T  30937502 aactacaattgaagtagatactaagatttagatcaaatttgctaaaagataaaggaaggtttgaaagtgtaacattttttcttgttcaaagacatttttt 30937403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 20611794 - 20611888
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||| ||| | |  || ||||||||| ||||||||||||||| |||||||||| ||| ||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacat 20611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 30937909 - 30937843
Alignment:
Q  277 agcacaaacccttttttcatagttgaaccaattccattaatcaaaccaccaacaacattatttaact 343  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| ||||||||    
T  30937909 agcacaaacccttttttcatagttgaaccaaatcgaataatcaaaccaccaacaacatcatttaact 30937843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 30937778 - 30937688
Alignment:
Q  374 caatttctgcttcatcatcagccacaaagacatag-----ggcttcgatttttcatcattactataggttctaaaaatgaagtgtaagtat 459  Q
    |||||||||||||||||||||||||||| |||||      |||||| ||||||||| ||||||||||||||||||||||||  ||||||||    
T  30937778 caatttctgcttcatcatcagccacaaacacataacataaggcttcaatttttcataattactataggttctaaaaatgaaaggtaagtat 30937688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 4036953 - 4037031
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||||| ||||||||||| || || |||| ||||| ||||  |||||||||||||||||||||||||| |||||||    
T  4036953 gttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 30121783 - 30121860
Alignment:
Q  47 gtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| |||||||||| ||| | || |||||||||| | |||||||||||||| ||||||||||| |||||| |||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacat 30121860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 457 - 501
Target Start/End: Complemental strand, 30937662 - 30937618
Alignment:
Q  457 tatatagatatagatgtaatcacctcactagaaggttgatgactt 501  Q
    ||||||||||||||||||||||||||| |||||| || |||||||    
T  30937662 tatatagatatagatgtaatcacctcattagaagtttaatgactt 30937618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 2e-55; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 38209708 - 38209590
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38209708 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 38209609  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  38209608 aaatagaacattgctcttt 38209590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 10978890 - 10979008
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  10978890 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 10978989  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  10978990 aaatagaacattgctcttt 10979008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 32915375 - 32915493
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32915375 tttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 32915474  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  32915475 aaatagaacatcgctcttt 32915493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 34768691 - 34768573
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  34768691 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34768592  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  34768591 aaatagaacattgctcttt 34768573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 37514649 - 37514767
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  37514649 tttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 37514748  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  37514749 aaatagaacatcgctcttt 37514767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 47128977 - 47129087
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47128977 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 47129076  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  47129077 aaatagaacat 47129087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 54780771 - 54780885
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  118 agaacatcgctcttt 132  Q
    ||||||| |||||||    
T  54780871 agaacattgctcttt 54780885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 43455645 - 43455530
Alignment:
Q  17 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaa 43455546  T
Q  117 tagaacatcgctcttt 132  Q
    |||||||| |||||||    
T  43455545 tagaacattgctcttt 43455530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 48209230 - 48209348
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48209230 tttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 48209329  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  48209330 aaatagaacattgctcttt 48209348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 5128959 - 5128842
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||    
T  5128959 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatat 5128860  T
Q  114 aaatagaacatcgctctt 131  Q
    |||||||| |||||||||    
T  5128859 aaatagaatatcgctctt 5128842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 13460197 - 13460306
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13460197 tttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatat 13460296  T
Q  114 aaatagaaca 123  Q
    ||||||||||    
T  13460297 aaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 1105522 - 1105640
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||    
T  1105522 tttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatat 1105621  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||| ||||||    
T  1105622 aaatagaacatcactcttt 1105640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 32128574 - 32128692
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  32128574 tttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 32128673  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  32128674 aaatagaacattgctcttt 32128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 34027569 - 34027679
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  34027569 tttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 34027668  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  34027669 aaatagaacat 34027679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 37777340 - 37777230
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  37777340 tttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 37777241  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  37777240 aaatagaacat 37777230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 2790851 - 2790748
Alignment:
Q  21 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 120  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 2790752  T
Q  121 acat 124  Q
    ||||    
T  2790751 acat 2790748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 19498494 - 19498610
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||  |||||||||||||| |||||||||||||||||||||    
T  19498494 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgc--atatacggcaccttatatttatcttttaaaaaatat 19498591  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  19498592 aaatagaacattgctcttt 19498610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 54083359 - 54083253
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  54083359 tttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54083260  T
Q  114 aaataga 120  Q
    |||||||    
T  54083259 aaataga 54083253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 10428322 - 10428204
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcac--------ctctgggtataccgcatatatacggcaccttgtatttatctttta 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||    
T  10428322 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta 10428223  T
Q  106 aaaaatataaatagaacat 124  Q
    |||||||||||||||||||    
T  10428222 aaaaatataaatagaacat 10428204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 40089506 - 40089609
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| ||||||||    
T  40089506 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttt-aaaaatat 40089604  T
Q  114 aaata 118  Q
    |||||    
T  40089605 aaata 40089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 16845011 - 16845130
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaata 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||  |||||||||| |||||| |||||||||||| ||||||||    
T  16845011 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaata 16845110  T
Q  113 taaatagaacatcgctcttt 132  Q
    |||||||||||| |||||||    
T  16845111 taaatagaacattgctcttt 16845130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 35779442 - 35779325
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| |||||||||  |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  35779442 tttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 35779343  T
Q  114 aaatagaacatcgctcttt 132  Q
     |||||||||| |||||||    
T  35779342 -aatagaacattgctcttt 35779325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 16882512 - 16882402
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||| ||||||| |||  ||||||||||||||||||||| | ||| ||||| ||||| |||||||||| ||||||||||||||||| |||    
T  16882512 tttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtat 16882413  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  16882412 aaatagaacat 16882402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 35465097 - 35465206
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| | | ||| |||||||||||||| ||||||| |||||||||| ||||||||||    
T  35465097 tttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatcttgtaaaaaatat 35465195  T
Q  114 aaatagaacat 124  Q
    ||||| |||||    
T  35465196 aaatataacat 35465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 17679432 - 17679508
Alignment:
Q  56 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttt 17679508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata 112  Q
    ||||||||||||||| |||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 55255259 - 55255365
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||    
T  55255259 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggt------------ggcggcaccttgtatttatcttttaaaaaatat 55255346  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||| |||||| |||||||    
T  55255347 aaatggaacattgctcttt 55255365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 24969427 - 24969523
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||    
T  24969427 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 24969516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 52468292 - 52468386
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||   ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 52468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 23509915 - 23509846
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatac 83  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  23509915 tttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 51964736 - 51964819
Alignment:
Q  52 cattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt---aaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttt 51964819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 38352372 - 38352276
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||    
T  38352372 tttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 38352283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 27112036 - 27112130
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||| | | ||| || |||||||||| | |||||||||||||||||||||||||| ||||| ||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacat 27112130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 36118559 - 36118465
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||| ||||||||||||||||| |||||||  | ||||| || | |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 36118465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 51691976 - 51691914
Alignment:
Q  70 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  51691976 taccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctcttt 51691914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 16922409 - 16922328
Alignment:
Q  51 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||| |||| |||| ||||||||||| ||| || |||||||||||||||||||||||||||||||| |||||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttt 16922328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 36178684 - 36178772
Alignment:
Q  36 tcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||| |||||||| | ||||| || |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacat 36178772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 9578736 - 9578663
Alignment:
Q  60 cctctgggtataccgcatatatacggc-accttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  9578736 cctctggatgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 9578663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 24396940 - 24397028
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    ||||||||||||||||| |||| |||||||||| || || || | ||||||||| ||||||| ||||||||||||||||||| ||||||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 2135422 - 2135331
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    |||||||||| |||||| |||| || || |||| ||| | || |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacat 124  Q
    ||||||||| |||||||||||| |||||||||| ||| | || ||||||||| || |||||| |||||||||||||| ||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 39655332 - 39655261
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| ||||| |||||||||||| ||| || |||||||||||||||||||||| ||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacat 39655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 10042101 - 10042007
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||| ||||||||||||| |||||||| | | ||| || | |||| |||||||||||||||||||| |||| |||||| ||||||||||||    
T  10042101 ggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacat 10042007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 39329492 - 39329399
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||| |||||||||||   ||||||| || ||||| || | |||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  39329492 gttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacat 39329399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 36362964 - 36362886
Alignment:
Q  38 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaa 116  Q
    ||||||| |||||| |||| ||| | ||||| ||  ||||||||||||||| |||||||||||||||||||||| ||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaa 36362886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 45656181 - 45656275
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| ||||||||||| | || |||||||| | ||| | || |||||||||| | ||||||| |||||||||||||||||| |||||| |||||    
T  45656181 ggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaacat 45656275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 40217238 - 40217327
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 119  Q
    |||| |||||||||| | || | ||||||| || ||| | || |||||||||||| |||||| ||||||||||||||||||| |||||||    
T  40217238 ggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 23508564 - 23508512
Alignment:
Q  78 atatacggcaccttgtatttatcttttaaaaaa-tataaatagaacatcgctc 129  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgctc 23508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 29425231 - 29425187
Alignment:
Q  74 gcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||    
T  29425231 gcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 15735142 - 15735189
Alignment:
Q  76 atatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 123  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||    
T  15735142 atatatacgacgtcttgtatttatcttttaaaaaatttaaatagaaca 15735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 24614018 - 24614053
Alignment:
Q  89 cttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacat 24614053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 30507162 - 30507129
Alignment:
Q  91 tgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||||||| ||||||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacat 30507129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 2e-55; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 47467672 - 47467790
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  47467672 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatat 47467771  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  47467772 aaatagaacatcgctcttt 47467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 54619321 - 54619203
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54619321 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 54619222  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  54619221 aaatagaacattgctcttt 54619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 42098789 - 42098907
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42098789 tttggtgttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 42098888  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  42098889 aaatagaacatcgctcttt 42098907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 21582759 - 21582869
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21582759 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21582858  T
Q  114 aaatagaacat 124  Q
    ||||| |||||    
T  21582859 aaataaaacat 21582869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 53149432 - 53149314
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  53149432 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 53149333  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  53149332 aaatagaacatcgctcttt 53149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 3954014 - 3953904
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3954014 tttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3953915  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  3953914 aaatagaacat 3953904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 27078687 - 27078577
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27078687 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27078588  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  27078587 aaatagaacat 27078577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 27084484 - 27084374
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27084484 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27084385  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  27084384 aaatagaacat 27084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 38681211 - 38681093
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  38681211 tttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatat 38681112  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  38681111 aaatagaacattgctcttt 38681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 34290754 - 34290644
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  34290754 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34290655  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  34290654 aaatagaacat 34290644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 36716143 - 36716025
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36716143 tttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 36716044  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  36716043 aaatagaacattgctcttt 36716025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 44708465 - 44708575
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  44708465 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatat 44708564  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  44708565 aaatagaacat 44708575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 37168359 - 37168465
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  37168359 gtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaat 37168458  T
Q  118 agaacat 124  Q
    |||||||    
T  37168459 agaacat 37168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 43207355 - 43207238
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||||||||| |||||||||||||||||||||    
T  43207355 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 43207257  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  43207256 aaatagaacattgctcttt 43207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 53507002 - 53506892
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  53507002 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 53506903  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  53506902 aaatagaacat 53506892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 8073455 - 8073346
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  8073455 tttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 8073357  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  8073356 aaatagaacat 8073346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 54407275 - 54407166
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  54407275 tttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54407177  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  54407176 aaatagaacat 54407166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 18372467 - 18372589
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgc----atatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| || ||||||    ||||||||| ||||||||||||||||||||||||    
T  18372467 tttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaa 18372566  T
Q  110 atataaatagaacatcgctcttt 132  Q
    ||||||||||||||| |||||||    
T  18372567 atataaatagaacattgctcttt 18372589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 9878805 - 9878687
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||| ||||| ||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  9878805 tttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatat 9878706  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||| || |||||||    
T  9878705 aaatagaatattgctcttt 9878687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 50939351 - 50939245
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| ||||  |||||||||||||||| |||||||||||||||||||||    
T  50939351 tttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatat 50939252  T
Q  114 aaataga 120  Q
    |||||||    
T  50939251 aaataga 50939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29620504 - 29620423
Alignment:
Q  16 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtattt 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29620504 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 50258731 - 50258623
Alignment:
Q  25 gtgggggttcctcatgtatacggtagtcattttcacc-tctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 123  Q
    |||||||||||||||| ||||  |||||||||||||| || |||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  124 tcgctcttt 132  Q
    |||||||||    
T  50258631 tcgctcttt 50258623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 36605973 - 36606069
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacatcgctct 130  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctct 36606069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 28689458 - 28689369
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  28689458 ctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacat 28689369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 8420330 - 8420424
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||| | ||||||| ||| |||||||| | ||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8420330 ggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 8420424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 54574929 - 54574835
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||| |||||| ||||| || | ||||| |||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacat 54574835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 32319257 - 32319163
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||| | |||| | |||| |||||||||| ||||| ||||||||||||||  ||| |||||||||||||||||||||| ||||||||||||    
T  32319257 ggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacat 32319163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 48157127 - 48157223
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||    
T  48157127 tttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 48157216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 49393099 - 49393187
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||| ||||| |||| ||||| |||  |||||||||| | |||||||||||||||||||||||| |||| |||||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacat 49393187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 23641380 - 23641329
Alignment:
Q  70 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  23641380 taccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 25855426 - 25855519
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| || ||||||||||||| ||||||| || |||||  ||  |||||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  25855426 ggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgta-ttatcttttaaaaaatttaaatagaacat 25855519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 26279563 - 26279640
Alignment:
Q  47 gtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| ||||||| || ||||| ||  ||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacat 26279640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 789940 - 790031
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    ||||||||||||||| ||| || ||||| |||| ||||| |||  |||||||| | ||||||||||||||  |||||||||| |||||||||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaa 790031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 42453451 - 42453502
Alignment:
Q  73 cgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| | |||||||||||||||||||||||||| ||||| ||||||    
T  42453451 cgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacat 42453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 52374660 - 52374754
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| |||||||||||||||| |||||| ||| | | | || ||||| |||||| ||| |||||||||| |   ||||||| ||||||||||||    
T  52374660 ggttcttcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacat 52374754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 2e-55; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 5316676 - 5316794
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5316676 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5316775  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  5316776 aaatagaacattgctcttt 5316794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 14146296 - 14146414
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14146296 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 14146395  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  14146396 aaatagaacatcgctcttt 14146414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 6771787 - 6771905
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6771787 tttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 6771886  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  6771887 aaatagaacatcgctcttt 6771905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 23185423 - 23185541
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23185423 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 23185522  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  23185523 aaatagaacattgctcttt 23185541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 3406414 - 3406532
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  3406414 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3406513  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  3406514 aaatagaacatcgctcttt 3406532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 3440406 - 3440288
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  3440406 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3440307  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  3440306 aaatagaacatcgctcttt 3440288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 44655737 - 44655855
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  44655737 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 44655836  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  44655837 aaatagaacattgctcttt 44655855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 4971735 - 4971617
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  4971735 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 4971636  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  4971635 aaatagaacattgctcttt 4971617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 5027545 - 5027663
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5027545 tttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5027644  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  5027645 aaatagaacattgctcttt 5027663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 9173140 - 9173030
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  9173140 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9173041  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  9173040 aaatagaacat 9173030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 9181122 - 9181012
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  9181122 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9181023  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  9181022 aaatagaacat 9181012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 1366995 - 1366878
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  1366995 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 1366896  T
Q  114 aaatagaacatcgctctt 131  Q
    ||||||||||| ||||||    
T  1366895 aaatagaacattgctctt 1366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 27559635 - 27559743
Alignment:
Q  16 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataa 27559734  T
Q  116 atagaacat 124  Q
    |||||||||    
T  27559735 atagaacat 27559743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 16140055 - 16140169
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16140055 gtgttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaat 16140154  T
Q  118 agaacatcgctcttt 132  Q
    |||||||| ||||||    
T  16140155 agaacatcactcttt 16140169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 41697254 - 41697136
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||  || ||||||||||||||||||||||||    
T  41697254 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatat 41697155  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  41697154 aaatagaacatcgctcttt 41697136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 50881426 - 50881544
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||    
T  50881426 tttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 50881525  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  50881526 aaatagaacattgctcttt 50881544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 19955713 - 19955819
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  19955713 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 19955812  T
Q  114 aaataga 120  Q
    |||||||    
T  19955813 aaataga 19955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 17168952 - 17169062
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||  |||||| |||||||||||||||||||||    
T  17168952 tttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatat 17169051  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  17169052 aaatagaacat 17169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 40501907 - 40501801
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  40501907 tttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 40501808  T
Q  114 aaataga 120  Q
    |||||||    
T  40501807 aaataga 40501801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 21741029 - 21740936
Alignment:
Q  39 tgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttt 21740936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 51607557 - 51607446
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacgg-caccttgtatttatcttttaaaaaata 112  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  51607557 tttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaata 51607458  T
Q  113 taaatagaacat 124  Q
    |||||| |||||    
T  51607457 taaataaaacat 51607446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 13913599 - 13913491
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatata--cggcaccttgtatttatcttttaaaaaat 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||||||  ||||| ||| |||||||||||||||||||    
T  13913599 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaat 13913500  T
Q  112 ataaataga 120  Q
    |||||||||    
T  13913499 ataaataga 13913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 38547137 - 38547043
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||| | |||| |||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 38547043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 27906834 - 27906728
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||    
T  27906834 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggt------------ggcggcaccttgtatttatcttttaaaaaatat 27906747  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||| |||||| |||||||    
T  27906746 aaatggaacattgctcttt 27906728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 6889634 - 6889725
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||| | |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  6889634 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttt 6889725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 6891480 - 6891571
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||| | |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||    
T  6891480 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttt 6891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 38853539 - 38853627
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 123  Q
    ||||||||||||||||| |||||||||| ||| |||||  |||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaaca 38853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 44895648 - 44895748
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||      |  || |||||| |||||||||||||||||||||    
T  44895648 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc------acccgccaccttatatttatcttttaaaaaatat 44895741  T
Q  114 aaataga 120  Q
    |||||||    
T  44895742 aaataga 44895748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 39134824 - 39134729
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||| ||||| ||| |||||| ||||| ||  |||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacat 39134729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 45758506 - 45758600
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||| ||| | ||   |||||||||  ||||||| |||||||||||||||||| ||||||||||||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacat 45758600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 35392295 - 35392375
Alignment:
Q  43 tacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacat 35392375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 22865538 - 22865460
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||| ||||| ||||| |||||||  ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 22865460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 5533326 - 5533404
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 110  Q
    |||||||||||||||||||| |||||||||| ||  | |||  ||||||||||||||||||| ||||||||||||||||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaa 5533404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 26803960 - 26804045
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||| ||||||||||||||||| |||||||||| || ||||  |||||||||||| || ||||||||||||||||||||||| ||||||    
T  26803960 ggtttctcatgtatacggtagtgattttcacct-tgtgtat--cgcatatatacgacatcttgtatttatcttttaaaaaatttaaata 26804045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 43235871 - 43235775
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttt--taaaaaatataaatagaacat 124  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||  |||||||||| || |||||||||||||||   ||||||| ||||||||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacat 43235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 33170771 - 33170865
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||| ||||||||||||||||| |||||||||  | ||| ||||||||||||||  ||| |||||||||  ||||||||||| |||||| |||||    
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacat 33170865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 50146308 - 50146402
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||| |||| | ||||| |||| ||||| || | |||||| ||||||||||| |||||||||| ||||| | ||||||||||||    
T  50146308 ggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacat 50146402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 6221690 - 6221783
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| |||||| || | |||||||| | | | | |||||| |||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  6221690 ggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacat 6221783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 17322684 - 17322630
Alignment:
Q  70 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||  || |||||||||||||| ||||||||||||||||||||    
T  17322684 taccgcatatatacgctacattgtatttatctttaaaaaaatataaatagaacat 17322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 10926052 - 10925976
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||||||||||||||| ||||||| || ||| |  | | |||||||||||||| |||||||||| |||||||||    
T  10926052 tcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaa 10925976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 4e-53; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 30883314 - 30883432
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  30883314 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatat 30883413  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  30883414 aaatagaacattgctcttt 30883432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 45475802 - 45475920
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45475802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 45475901  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  45475902 aaatagaacattgctcttt 45475920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 2952339 - 2952221
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2952339 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 2952240  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  2952239 aaatagaacattgctcttt 2952221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 13534804 - 13534687
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  13534804 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13534706  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  13534705 aaatagaacattgctcttt 13534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 13624344 - 13624227
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  13624344 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13624246  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  13624245 aaatagaacattgctcttt 13624227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 5860862 - 5860744
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5860862 tttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5860763  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  5860762 aaatagaacattgctcttt 5860744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 23606747 - 23606629
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  23606747 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23606648  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  23606647 aaatagaacattgctcttt 23606629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 23798379 - 23798261
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  23798379 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23798280  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  23798279 aaatagaacattgctcttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 37430276 - 37430158
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||||    
T  37430276 tttggtgttacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatat 37430177  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  37430176 aaatagaacatcgctcttt 37430158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 10917376 - 10917482
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  10917376 tttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10917475  T
Q  114 aaataga 120  Q
    |||||||    
T  10917476 aaataga 10917482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 42600767 - 42600873
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  42600767 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 42600866  T
Q  114 aaataga 120  Q
    |||||||    
T  42600867 aaataga 42600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 3048635 - 3048517
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3048635 tttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3048536  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||| | || |||||||    
T  3048535 aaatagtatattgctcttt 3048517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 41879166 - 41879276
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  41879166 tttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 41879265  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  41879266 aaatagaacat 41879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 7944624 - 7944530
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacat 7944530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 8102913 - 8103007
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||| | |||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacat 8103007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 110  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||||||||| |||||||| | ||||| |||||  |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 5973209 - 5973115
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||| ||||||||||| | ||||||| || ||||| |||  |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 5973115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 11290185 - 11290279
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||| ||||||||||||||||| |||||||||| || || |||  |||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacat 11290279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 39332507 - 39332413
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||| |||||| | ||||||||||||||||||| |||||  ||||||||||||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacat 39332413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 34789959 - 34789862
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||||||||| |||||||||| ||||| |||  |||||||||| || |||||||||||||||||| | || |||||||||||||| |||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttcttt 34789862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 15078759 - 15078853
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacat 15078853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 15167517 - 15167423
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||| |||| |||||||| | ||||| || |||||||||||  ||| || ||||||||||||||||||| ||||||||||||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacat 15167423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 25561595 - 25561503
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||| ||| |||||||| | ||||| || |||||||||||||||||||||||||||| ||||||| || ||||||||||||    
T  25561595 ggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacat 25561503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 41677276 - 41677181
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacat 124  Q
    |||||||||||||||| ||||| |||||||||| | | | || |||||||||||| || |||||||||||||||||| ||||| ||||||||||||    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacat 41677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 8646215 - 8646300
Alignment:
Q  38 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||| |||||||| | || || ||  |||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  8646215 atgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacat 8646300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 30674482 - 30674411
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| || || || |||||||||||| |||||| |||||||||||||||| || ||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacat 30674411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 14510084 - 14509991
Alignment:
Q  30 ggttcctcatgtatacggtagtcatttt-cacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||| ||||||||||||||||| ||||| ||| | ||||| |||||  |||||||| |||||| ||||| ||||||||||||| ||||| ||||||    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacat 14509991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 23941170 - 23941099
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||| || ||||| || ||| |||||| | |||||||||||||||||||||||||| |||||| |||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacat 23941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 34868223 - 34868185
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacat 34868185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 9108551 - 9108588
Alignment:
Q  87 accttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacat 9108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 5757123 - 5757153
Alignment:
Q  72 ccgcatatatacggcaccttgtatttatctt 102  Q
    |||||||||||||||||||||||||||||||    
T  5757123 ccgcatatatacggcaccttgtatttatctt 5757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 34048806 - 34048713
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtatacc--gcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||| ||||| ||||||| || ||||| || |    ||||||||| ||| |||||||||||||||||||  | ||||||||||||    
T  34048806 tcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacat 34048713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 4e-53; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 8171656 - 8171538
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8171656 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 8171557  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  8171556 aaatagaacattgctcttt 8171538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 10955469 - 10955587
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  10955469 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10955568  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  10955569 aaatagaacatcgctcttt 10955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 12596404 - 12596286
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  12596404 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatat 12596305  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  12596304 aaatagaacatcgctcttt 12596286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 18776883 - 18776765
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18776883 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 18776784  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  18776783 aaatagaacattgctcttt 18776765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 29077205 - 29077323
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  29077205 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 29077304  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  29077305 aaatagaacattgctcttt 29077323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 20091398 - 20091292
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  20091398 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 20091299  T
Q  114 aaataga 120  Q
    |||||||    
T  20091298 aaataga 20091292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 24525802 - 24525692
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  24525802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatat 24525703  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  24525702 aaatagaacat 24525692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 48983961 - 48983855
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  48983961 tttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 48983862  T
Q  114 aaataga 120  Q
    |||||||    
T  48983861 aaataga 48983855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 10329527 - 10329417
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| | || ||||||||||||||||| |||||||||||||||||||||    
T  10329527 tttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatat 10329428  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  10329427 aaatagaacat 10329417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 38414993 - 38414875
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||| |||||| ||||||||||||||||||||     
T  38414993 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatac 38414894  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||| | |||||||    
T  38414893 aaatagaacgttgctcttt 38414875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 23551188 - 23551081
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaata 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||||||||| ||||||    
T  23551188 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaata 23551089  T
Q  113 taaataga 120  Q
    ||||||||    
T  23551088 taaataga 23551081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 47985083 - 47984976
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaa 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  47985083 gtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaa 47984984  T
Q  117 tagaacat 124  Q
    ||||||||    
T  47984983 tagaacat 47984976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 19692079 - 19692197
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||| | ||||||||||||||||||  |||||||||||||| | ||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  19692079 tttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatat 19692178  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  19692179 aaatagaacattgctcttt 19692197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 9021898 - 9021812
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 119  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 28749715 - 28749812
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctcttt 28749812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 26254015 - 26254096
Alignment:
Q  51 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 26254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 8239670 - 8239782
Alignment:
Q  14 tttggtgttaggtgg--gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaat 111  Q
    |||||||||| ||||  ||||||||||| ||||||||| |||||||||| | ||||| |||| |||||||||||||| || ||||||| |||||||||||    
T  8239670 tttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaat 8239769  T
Q  112 ataaatagaacat 124  Q
    |||||||||||||    
T  8239770 ataaatagaacat 8239782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 33162418 - 33162338
Alignment:
Q  52 cattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 23859077 - 23859168
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||||| ||||||| || ||||| || ||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacat 23859168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 2611363 - 2611269
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||| || || |||||||||  || || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 2611269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 7398452 - 7398546
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||| |||||| |||||||||| | ||| || | |||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacat 7398546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 36891579 - 36891673
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||| ||| | ||||| ||||||||  ||| ||||||| ||| |||||||||||||||||||||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacat 36891673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 25010418 - 25010479
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgc 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25010418 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 25010479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 6765771 - 6765688
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||| |||||||||| ||| | ||| || |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 6765688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 12981327 - 12981421
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| ||||| ||||| |||||||||| || || |||||| |||||| || ||||||||||||||||||||||||  ||||||||||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacat 12981421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 23744808 - 23744891
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||| ||||| | || | ||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacat 23744891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 20153206 - 20153296
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||| ||| ||||||| || ||||| || |||||||||||  ||| |||||||||||||||||||||| |||||| |||||    
T  20153206 cctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacat 20153296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 27237524 - 27237430
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||| |||| |||||||||| | | |  | | |||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  27237524 ggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 27237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 36903022 - 36902931
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||| ||| | |||||||||| | ||| |||  |||||||||| || ||||||||||||| ||||||||| ||||||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacat 36902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 21763672 - 21763595
Alignment:
Q  46 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 123  Q
    |||||| |||||||| | | ||| || ||||||||||||  || |||||||||||||||||||||| |||||||||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaaca 21763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 9014863 - 9014782
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||| ||||||||||||||||| |||||||||| |||||       ||||||||| ||| |||||||||||||||| ||||| ||||||    
T  9014863 ggttactcatgtatacggtagtgattttcacctttgggt-------atatatacgacacattgtatttatcttttacaaaatttaaata 9014782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 12419596 - 12419502
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||| |  |||| ||||||| || ||| | || | || ||||| || || |||||||||||||||||||||| ||||||||||||    
T  12419596 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacat 12419502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 18201138 - 18201228
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 120  Q
    |||||||||||| || ||||   |||||||||  | ||| |||| |||||||| |||| ||||||||||| ||||||||||| ||||||||    
T  18201138 ggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaataga 18201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 38971255 - 38971333
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||| ||| ||||||||| |||||||| | | ||| ||   |||||||||| ||||||||||||||||||||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 4e-53; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 19523184 - 19523302
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19523184 tttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 19523283  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||| ||||||||    
T  19523284 aaatagaacaccgctcttt 19523302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 34756481 - 34756363
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34756481 tttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 34756382  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  34756381 aaatagaacattgctcttt 34756363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 30854314 - 30854432
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  30854314 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 30854413  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  30854414 aaatagaacattgctcttt 30854432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 36187994 - 36187876
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  36187994 tttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatat 36187895  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  36187894 aaatagaacatcgctcttt 36187876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 2274875 - 2274993
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||||    
T  2274875 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatat 2274974  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  2274975 aaatagaacatcgctcttt 2274993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 15480204 - 15480086
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  15480204 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatat 15480105  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||||| |||||    
T  15480104 aaatagaacatcggtcttt 15480086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 27078996 - 27079114
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27078996 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 27079095  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  27079096 aaatagaacattgctcttt 27079114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 28822457 - 28822339
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  28822457 tttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 28822358  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  28822357 aaatagaacattgctcttt 28822339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 9364276 - 9364386
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  9364276 tttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9364375  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  9364376 aaatagaacat 9364386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 16592189 - 16592071
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||    
T  16592189 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatat 16592090  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  16592089 aaatagaacattgctcttt 16592071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 38869478 - 38869360
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  38869478 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 38869379  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  38869378 aaatagaacattgctcttt 38869360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 16198909 - 16198799
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||| |||||||||||||||||||||    
T  16198909 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatat 16198810  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  16198809 aaatagaacat 16198799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 16799442 - 16799332
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||    
T  16799442 tttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatat 16799343  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  16799342 aaatagaacat 16799332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 31194706 - 31194609
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 31194609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 40389647 - 40389541
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  40389647 gtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaat 40389548  T
Q  118 agaacat 124  Q
    |||||||    
T  40389547 agaacat 40389541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 27924067 - 27924172
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  27924067 tttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27924166  T
Q  114 aaatag 119  Q
    ||||||    
T  27924167 aaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 7670909 - 7671020
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaata 112  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||| |||||||||||| ||||||||    
T  7670909 tttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaata 7671008  T
Q  113 taaatagaacat 124  Q
    ||||||||||||    
T  7671009 taaatagaacat 7671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 23284164 - 23284059
Alignment:
Q  27 gggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcg 126  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||   ||||||||||||||||||||||| |    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  127 ctcttt 132  Q
    ||||||    
T  23284064 ctcttt 23284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 22986658 - 22986555
Alignment:
Q  29 gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgct 128  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||| |||    
T  22986658 gggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgct 22986559  T
Q  129 cttt 132  Q
    ||||    
T  22986558 cttt 22986555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 31881528 - 31881431
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||||||||| ||||||| |||||| | | |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctcttt 31881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 7338021 - 7338102
Alignment:
Q  51 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 36868973 - 36868881
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||| |||||||| | ||||| |||| |||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacat 36868881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 2530996 - 2530902
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||| ||||| |||||||||| ||| | ||||| ||||||||| ||| |||||||||||||||||||||  ||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacat 2530902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 14318484 - 14318390
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||  | ||| | || | |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 14318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 2024738 - 2024647
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||| |||||| ||||||| || ||||| || | |||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  2024738 tcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacat 2024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 26719045 - 26718954
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||| ||||||| |||||||||| || || || |||||||||||| ||| |||||||||||||||||||| | ||||||||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacat 26718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 26988789 - 26988698
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||| ||||||| |||||||||| || || || |||||||||||| ||| |||||||||||||||||||| | ||||||||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacat 26988698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 34425904 - 34425998
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||| | ||||| | || | ||| || | |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacat 34425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 1366625 - 1366531
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| ||||||||||| |||||||| | | ||| || |||||||||||  || |||||||||||||| |||||||| ||||||||||||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacat 1366531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 2412089 - 2412183
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||| ||||| |||||||| | ||| |  | |||||||||||| ||| |||||||||| ||||||||||| ||||||||||||    
T  2412089 ggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacat 2412183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 33037781 - 33037875
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||| |  ||||||||| ||||| |||  ||||||||||  | ||||||||||||||||||||||| |||||| |||||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacat 33037875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 24395741 - 24395834
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||||| || |||||||||| ||| | ||  | ||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  24395741 gttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 24395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 10543682 - 10543768
Alignment:
Q  38 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||| |||||||||| ||| | || |||||||||||  |||||| ||||||||||||||||||| ||| | ||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacat 10543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 10407464 - 10407556
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||||||| |||||||| | | | | |||  ||||| |||| |||||||| ||||||||||||||||| ||||||||||||    
T  10407464 ttcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacat 10407556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 41911716 - 41911636
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 110  Q
    |||||||||| |||||| |||| ||||| || | ||||| |||||| |||||||| |||||||||||| ||||||||||||    
T  41911716 ggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaa 41911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 22648824 - 22648741
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| ||||| ||| |||||| ||| | | || |||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  22648824 tatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacat 22648741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 11242417 - 11242323
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||| || || ||| | || | |||||||||  ||  |||||||||||||||||||||  ||||||||||||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacat 11242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 40794426 - 40794332
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||| ||||||||||||||||| |||||||||| | ||| || |  |||| |||||| | |||||||| ||||||||||||| |||||| |||||    
T  40794426 ggtttctcatgtatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacat 40794332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 15639644 - 15639724
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 110  Q
    ||||||| |||||||||  ||| ||||||| || ||| | || |||||||||||| |||||||||||||||||| ||||||    
T  15639644 ggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaa 15639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 606211 - 606249
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaacat 606249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 17344969 - 17345051
Alignment:
Q  42 atacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| ||||| | || ||||| ||||||||||| | | || |||||||||||  | |||||||| ||||||||||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacat 17345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 4e-53; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 3155201 - 3155319
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3155201 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3155300  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  3155301 aaatagaacattgctcttt 3155319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 4505878 - 4505996
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4505878 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 4505977  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  4505978 aaatagaacattgctcttt 4505996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 6964991 - 6965109
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  6964991 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 6965090  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  6965091 aaatagaacattgctcttt 6965109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 7162768 - 7162886
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7162768 tttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 7162867  T
Q  114 aaatagaacatcgctcttt 132  Q
    |||||||||||||||||||    
T  7162868 aaatagaacatcgctcttt 7162886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 3952990 - 3953108
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  3952990 tttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatat 3953089  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||||| |||||    
T  3953090 aaatagaacatcggtcttt 3953108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 12337566 - 12337448
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||    
T  12337566 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatat 12337467  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  12337466 aaatagaacattgctcttt 12337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 8907197 - 8907087
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8907197 tttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatat 8907098  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  8907097 aaatagaacat 8907087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 10762683 - 10762565
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatat 10762584  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  10762583 aaatagaacattgctcttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 29939980 - 29939862
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  29939980 tttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatat 29939881  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||| |||||||    
T  29939880 aaatagaacattgctcttt 29939862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 24410420 - 24410531
Alignment:
Q  14 tttggtgttaggtgggg-gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  24410420 tttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 24410519  T
Q  113 taaatagaacat 124  Q
    ||||||||||||    
T  24410520 taaatagaacat 24410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 9046017 - 9046124
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  9046017 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaa 9046116  T
Q  117 tagaacat 124  Q
    ||||||||    
T  9046117 tagaacat 9046124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 26716116 - 26716231
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  26716116 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaa 26716215  T
Q  117 tagaacatcgctcttt 132  Q
    |||||||| |||||||    
T  26716216 tagaacattgctcttt 26716231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 27506858 - 27506752
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  27506858 tttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 27506759  T
Q  114 aaataga 120  Q
    |||||||    
T  27506758 aaataga 27506752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 34693991 - 34694077
Alignment:
Q  46 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 34694077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 34716403 - 34716489
Alignment:
Q  46 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 34716489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 16097008 - 16097102
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||| |||||| |||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 16097102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 40636164 - 40636240
Alignment:
Q  56 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 40636240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 24035645 - 24035553
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||| ||||||| |||||||||| | ||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24035645 ttcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 24035553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 38400798 - 38400892
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||| ||  | || |||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacat 38400892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 5952791 - 5952717
Alignment:
Q  56 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttt 5952717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 13800647 - 13800552
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctct-gggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||| ||||||  ||||| |||||||||| | |||| || ||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  13800647 ggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacat 13800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 12134142 - 12134048
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||| |||||||||||||| |||||||| | ||||| || ||||||||||||| |||||||||||||||||||||   | ||||||||||||    
T  12134142 ggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacat 12134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 21665802 - 21665708
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||| | | | | || | |||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacat 21665708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 28425812 - 28425718
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| |||| |||||| |||||||| | ||||| ||| ||||||||||| |||||||||||||||||||||||  | ||||||||||||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacat 28425718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 7742236 - 7742141
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacat 124  Q
    ||||||||||| ||||| ||||  ||||||||| ||| | || |||||||||| | ||| ||||||||||||||||| ||||||||||||||||||    
T  7742236 ggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacat 7742141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 16227470 - 16227379
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    ||||||| |||||||  ||||| ||||||| || | ||| || | |||||||||| |||||||||||||||||||||||||| |||||||||    
T  16227470 ggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 16227379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 37182670 - 37182739
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttat 99  Q
    |||||||||||||||||||||| |||||||| | ||||| ||  ||||||||||| ||||||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 11912859 - 11912765
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||| |||||||||||||| ||||||| || ||| | ||  ||||||||||||||| |||||||||| ||||   |||| ||||||||||||    
T  11912859 ggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacat 11912765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 22727598 - 22727530
Alignment:
Q  36 tcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt 104  Q
    ||||||||| |||||| |||||||| | ||||| ||||||||||||||| ||| | |||||||||||||    
T  22727598 tcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 42029168 - 42029239
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| | ||| |||  ||| |||| | |||||| ||||||||||||||||||| ||||||||||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacat 42029239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 8327674 - 8327708
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaataga 120  Q
    |||||| ||||||||||||||||||||||||||||    
T  8327674 caccttatatttatcttttaaaaaatataaataga 8327708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 10252472 - 10252510
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  10252472 caccttgtatttatcttttaaaaaatttaaattgaacat 10252510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 1328 - 1446
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1328 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatat 1427  T
Q  114 aaatagaacatcgctcttt 132  Q
    ||||||||||  |||||||    
T  1428 aaatagaacagtgctcttt 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 95; Significance: 6e-46; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 106523 - 106633
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  106523 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 106622  T
Q  114 aaatagaacat 124  Q
    |||||||||||    
T  106623 aaatagaacat 106633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 360 - 266
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  360 ggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 266  T

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Target: scaffold0012 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 206591 - 206497
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||||||||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacat 206497  T

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Target: scaffold0018 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 173612 - 173518
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||||||||| ||||| |||| ||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacat 173518  T

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Target: scaffold0097 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 38926 - 39020
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||| ||||||||||| |||||||| | || || || |||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 39020  T

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Target: scaffold0182 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 24093 - 24004
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    ||||| ||| |||||||| | |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  24093 ttccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 24004  T

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Target: scaffold0007 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 230960 - 230867
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    |||||||||||||| |||||| |||||||||| |||||||| |||||||||||  ||||||  ||||||||||||| |||| ||||||||||||    
T  230960 gttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacat 230867  T

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Target: scaffold0001 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 181904 - 181969
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatat 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  181904 tttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

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Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 183106 - 183163
Alignment:
Q  75 catatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 132  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||    
T  183106 catatatacgatactttgtatttatcttttaaaaaatataaatagaacatctctcttt 183163  T

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Target: scaffold1320 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 1355 - 1449
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||| ||||||| ||||||||||||||||| | ||||||||||||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacat 1449  T

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Target: scaffold0022 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 40086 - 40182
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata--taaatagaacat 124  Q
    |||| |||||||||||| | || ||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||||| |  ||||||||||||    
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacat 40182  T

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Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 138146 - 138242
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata--taaatagaacat 124  Q
    |||| |||||||||||| | || ||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||||| |  ||||||||||||    
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacat 138242  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 16123 - 16160
Alignment:
Q  87 accttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacat 16160  T

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Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 16028 - 16095
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtattt 97  Q
    |||| ||||||||||||||||| ||||||| || ||| | ||||||||| ||||| || |||||||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa 106  Q
    |||||||||| ||||| |||  |||||||||| |||||||||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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