View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6682_2D_low_5 (Length: 911)

Name: NF6682_2D_low_5
Description: NF6682_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6682_2D_low_5
NF6682_2D_low_5
[»] chr4 (42 HSPs)
chr4 (184-595)||(45199368-45199780)
chr4 (643-911)||(45199053-45199320)
chr4 (9-122)||(45199811-45199924)
chr4 (724-839)||(35730933-35731048)
chr4 (726-833)||(37678122-37678229)
chr4 (724-838)||(8286930-8287044)
chr4 (726-840)||(50246132-50246246)
chr4 (737-821)||(47981921-47982005)
chr4 (758-838)||(48507723-48507803)
chr4 (737-838)||(54961429-54961530)
chr4 (737-821)||(13872354-13872438)
chr4 (725-821)||(19916929-19917025)
chr4 (737-833)||(47862155-47862251)
chr4 (737-833)||(47980688-47980784)
chr4 (737-838)||(8287218-8287319)
chr4 (737-833)||(12691409-12691505)
chr4 (737-821)||(19916671-19916755)
chr4 (737-821)||(22249748-22249832)
chr4 (737-838)||(12691690-12691791)
chr4 (777-838)||(35730660-35730721)
chr4 (737-838)||(53559672-53559773)
chr4 (737-821)||(22250018-22250102)
chr4 (737-833)||(37677851-37677947)
chr4 (737-837)||(50245856-50245956)
chr4 (737-796)||(20086477-20086536)
chr4 (737-832)||(34238474-34238569)
chr4 (770-833)||(37678044-37678107)
chr4 (770-821)||(48507539-48507590)
chr4 (724-826)||(20600957-20601059)
chr4 (761-821)||(13872084-13872144)
chr4 (726-818)||(27813067-27813159)
chr4 (725-833)||(32846365-32846473)
chr4 (737-817)||(33294428-33294508)
chr4 (770-833)||(8287057-8287120)
chr4 (770-833)||(19740863-19740926)
chr4 (534-593)||(21121943-21122002)
chr4 (770-833)||(26601272-26601335)
chr4 (778-833)||(27813181-27813236)
chr4 (770-833)||(47862277-47862340)
chr4 (758-821)||(54961737-54961800)
chr4 (737-818)||(33294162-33294243)
chr4 (760-833)||(37732300-37732373)
[»] chr3 (30 HSPs)
chr3 (724-833)||(30803849-30803958)
chr3 (737-837)||(21300418-21300518)
chr3 (737-833)||(33458203-33458299)
chr3 (737-821)||(1741402-1741486)
chr3 (737-821)||(30804133-30804217)
chr3 (726-838)||(33457914-33458026)
chr3 (504-578)||(28421480-28421555)
chr3 (737-836)||(55036669-55036768)
chr3 (737-831)||(40256879-40256973)
chr3 (504-582)||(47005546-47005624)
chr3 (737-833)||(10749321-10749417)
chr3 (737-821)||(10998158-10998242)
chr3 (726-826)||(30654754-30654853)
chr3 (737-837)||(55036954-55037054)
chr3 (725-796)||(46670528-46670599)
chr3 (504-582)||(3369313-3369391)
chr3 (724-821)||(21255803-21255900)
chr3 (724-796)||(33989054-33989126)
chr3 (737-796)||(24576580-24576639)
chr3 (526-595)||(41907329-41907399)
chr3 (761-818)||(49667-49724)
chr3 (737-838)||(51279229-51279330)
chr3 (737-821)||(10749681-10749765)
chr3 (737-833)||(22129009-22129105)
chr3 (728-833)||(24576291-24576398)
chr3 (737-821)||(40257158-40257242)
chr3 (770-821)||(30890332-30890383)
chr3 (770-833)||(33458041-33458104)
chr3 (770-833)||(55036794-55036857)
chr3 (724-833)||(28310620-28310729)
[»] chr6 (39 HSPs)
chr6 (724-833)||(7612551-7612660)
chr6 (726-821)||(3299833-3299928)
chr6 (724-838)||(19296499-19296613)
chr6 (737-839)||(32337561-32337663)
chr6 (737-838)||(20774366-20774467)
chr6 (737-838)||(26503639-26503740)
chr6 (737-833)||(3299562-3299658)
chr6 (737-821)||(13480223-13480307)
chr6 (737-833)||(20994976-20995072)
chr6 (737-821)||(21880379-21880463)
chr6 (737-821)||(23292029-23292113)
chr6 (737-821)||(30234877-30234961)
chr6 (759-838)||(15819797-15819876)
chr6 (737-821)||(5064350-5064434)
chr6 (769-833)||(5064531-5064595)
chr6 (758-838)||(16704615-16704695)
chr6 (737-821)||(20994834-20994917)
chr6 (737-833)||(21880649-21880745)
chr6 (758-821)||(738003-738066)
chr6 (737-836)||(5064620-5064719)
chr6 (770-821)||(21544533-21544584)
chr6 (770-833)||(32337689-32337752)
chr6 (724-834)||(20774091-20774201)
chr6 (729-810)||(1066416-1066497)
chr6 (737-818)||(22494165-22494246)
chr6 (737-826)||(26542905-26542994)
chr6 (737-826)||(31879743-31879832)
chr6 (737-821)||(9607601-9607685)
chr6 (737-821)||(13480493-13480577)
chr6 (504-595)||(15484943-15485035)
chr6 (737-821)||(23291759-23291843)
chr6 (770-833)||(7612673-7612736)
chr6 (770-817)||(22494005-22494052)
chr6 (770-833)||(23291869-23291932)
chr6 (770-833)||(26542742-26542805)
chr6 (737-843)||(20560921-20561027)
chr6 (737-815)||(32337852-32337930)
chr6 (740-833)||(18865123-18865216)
chr6 (724-796)||(26542656-26542729)
[»] chr2 (38 HSPs)
chr2 (724-833)||(22309703-22309812)
chr2 (724-833)||(9694014-9694123)
chr2 (724-837)||(28599426-28599539)
chr2 (737-843)||(19606910-19607016)
chr2 (737-838)||(20911128-20911229)
chr2 (737-843)||(32519440-32519546)
chr2 (737-838)||(1149935-1150036)
chr2 (737-838)||(16366961-16367062)
chr2 (737-838)||(22309429-22309530)
chr2 (724-817)||(37984746-37984839)
chr2 (737-837)||(8089451-8089551)
chr2 (737-821)||(10446847-10446931)
chr2 (737-833)||(28599712-28599808)
chr2 (737-821)||(32519170-32519254)
chr2 (724-826)||(5608866-5608968)
chr2 (739-821)||(9958840-9958922)
chr2 (725-835)||(9959098-9959208)
chr2 (724-833)||(17366629-17366738)
chr2 (737-838)||(18476905-18477006)
chr2 (737-821)||(16367248-16367332)
chr2 (737-821)||(41846407-41846491)
chr2 (728-796)||(41846668-41846736)
chr2 (763-838)||(17284741-17284816)
chr2 (737-839)||(22731817-22731919)
chr2 (737-838)||(1150222-1150323)
chr2 (770-835)||(17580453-17580518)
chr2 (737-833)||(4375836-4375932)
chr2 (737-833)||(17580331-17580427)
chr2 (737-821)||(20911415-20911498)
chr2 (505-545)||(22193519-22193559)
chr2 (761-821)||(37985036-37985096)
chr2 (737-821)||(45663793-45663877)
chr2 (770-833)||(5608790-5608853)
chr2 (739-794)||(17366909-17366964)
chr2 (770-833)||(32519280-32519343)
chr2 (770-821)||(41846600-41846651)
chr2 (737-794)||(9693784-9693841)
chr2 (737-838)||(43681854-43681955)
[»] chr1 (56 HSPs)
chr1 (724-838)||(48380679-48380793)
chr1 (728-833)||(33030337-33030442)
chr1 (506-595)||(18650135-18650225)
chr1 (737-821)||(26953386-26953470)
chr1 (737-839)||(33347413-33347515)
chr1 (737-838)||(49003160-49003261)
chr1 (737-821)||(2953749-2953833)
chr1 (737-821)||(25415129-25415213)
chr1 (504-595)||(26759635-26759725)
chr1 (737-821)||(37152823-37152907)
chr1 (737-839)||(1047489-1047591)
chr1 (728-838)||(8890485-8890595)
chr1 (724-838)||(24701541-24701655)
chr1 (737-826)||(33347701-33347790)
chr1 (737-838)||(35311972-35312073)
chr1 (725-838)||(35312249-35312362)
chr1 (737-834)||(49002878-49002975)
chr1 (737-833)||(12577297-12577393)
chr1 (737-833)||(19755690-19755786)
chr1 (737-821)||(26953116-26953200)
chr1 (737-833)||(46849943-46850039)
chr1 (737-838)||(739217-739318)
chr1 (737-838)||(24701268-24701369)
chr1 (770-835)||(26953295-26953360)
chr1 (725-818)||(52455028-52455121)
chr1 (737-821)||(1040313-1040397)
chr1 (737-821)||(1047219-1047303)
chr1 (761-821)||(5926534-5926594)
chr1 (737-833)||(5926806-5926902)
chr1 (737-821)||(25414859-25414943)
chr1 (737-821)||(33030620-33030704)
chr1 (737-821)||(37152553-37152637)
chr1 (725-796)||(10019646-10019717)
chr1 (508-583)||(18628673-18628748)
chr1 (770-821)||(33030459-33030510)
chr1 (759-821)||(49990103-49990165)
chr1 (737-838)||(6056374-6056475)
chr1 (504-553)||(26924854-26924902)
chr1 (737-826)||(46364860-46364949)
chr1 (724-817)||(46545003-46545096)
chr1 (737-821)||(739503-739587)
chr1 (737-821)||(2953479-2953563)
chr1 (737-821)||(29043040-29043124)
chr1 (737-833)||(29980923-29981019)
chr1 (776-836)||(34176116-34176176)
chr1 (737-821)||(46364589-46364673)
chr1 (770-821)||(10019581-10019632)
chr1 (770-833)||(25415040-25415103)
chr1 (770-821)||(30830339-30830390)
chr1 (770-833)||(46364771-46364834)
chr1 (770-836)||(35312169-35312235)
chr1 (758-820)||(46849674-46849736)
chr1 (737-818)||(5183791-5183872)
chr1 (737-821)||(6056663-6056748)
chr1 (737-838)||(12577008-12577109)
chr1 (772-833)||(33347612-33347673)
[»] chr8 (49 HSPs)
chr8 (724-833)||(40422432-40422541)
chr8 (737-833)||(40422163-40422259)
chr8 (737-835)||(22763881-22763979)
chr8 (724-838)||(37713694-37713808)
chr8 (737-838)||(29190444-29190545)
chr8 (737-838)||(20096018-20096119)
chr8 (737-838)||(40525505-40525606)
chr8 (737-838)||(41251121-41251222)
chr8 (737-821)||(547720-547804)
chr8 (737-817)||(29190179-29190259)
chr8 (730-833)||(9632331-9632434)
chr8 (737-826)||(38619808-38619897)
chr8 (737-837)||(27857027-27857127)
chr8 (737-821)||(36623367-36623451)
chr8 (737-821)||(41801831-41801915)
chr8 (726-837)||(13566409-13566520)
chr8 (725-783)||(24529731-24529789)
chr8 (737-838)||(7678-7779)
chr8 (737-838)||(11478143-11478244)
chr8 (724-821)||(22763610-22763707)
chr8 (724-833)||(31689898-31690007)
chr8 (737-838)||(36623638-36623739)
chr8 (737-838)||(41182181-41182282)
chr8 (737-821)||(7408-7492)
chr8 (725-833)||(15716149-15716257)
chr8 (737-821)||(31690181-31690264)
chr8 (737-821)||(37343067-37343151)
chr8 (737-821)||(43866726-43866810)
chr8 (737-821)||(43866996-43867080)
chr8 (758-821)||(20096330-20096393)
chr8 (770-833)||(23424637-23424700)
chr8 (742-833)||(24529946-24530037)
chr8 (737-796)||(25287832-25287891)
chr8 (504-595)||(10658884-10658978)
chr8 (737-819)||(40525792-40525874)
chr8 (761-838)||(9632612-9632689)
chr8 (770-835)||(15716070-15716135)
chr8 (737-838)||(35163495-35163596)
chr8 (772-833)||(41182023-41182084)
chr8 (737-821)||(547445-547529)
chr8 (737-833)||(23424515-23424611)
chr8 (737-821)||(23424797-23424881)
chr8 (770-833)||(11478270-11478333)
chr8 (737-796)||(11478430-11478489)
chr8 (770-833)||(22763720-22763783)
chr8 (505-578)||(25140386-25140461)
chr8 (770-833)||(25287917-25287980)
chr8 (758-821)||(26740024-26740087)
chr8 (779-834)||(40933179-40933234)
[»] chr5 (32 HSPs)
chr5 (724-833)||(7015781-7015890)
chr5 (737-838)||(33735598-33735699)
chr5 (724-808)||(27753751-27753835)
chr5 (724-838)||(22024142-22024256)
chr5 (728-821)||(21260880-21260973)
chr5 (737-838)||(32052509-32052610)
chr5 (737-821)||(12991073-12991157)
chr5 (737-821)||(13064694-13064778)
chr5 (737-833)||(14745451-14745547)
chr5 (725-833)||(34404487-34404594)
chr5 (737-838)||(6421907-6422008)
chr5 (737-821)||(25253371-25253455)
chr5 (737-821)||(25317162-25317246)
chr5 (724-838)||(22533662-22533776)
chr5 (737-826)||(27753489-27753577)
chr5 (737-838)||(37945279-37945379)
chr5 (737-833)||(7015511-7015607)
chr5 (737-833)||(8323341-8323437)
chr5 (737-821)||(14745598-14745682)
chr5 (725-817)||(18934732-18934824)
chr5 (737-817)||(25253105-25253185)
chr5 (737-817)||(25316895-25316975)
chr5 (737-821)||(32052239-32052323)
chr5 (737-833)||(37944997-37945093)
chr5 (770-833)||(16118147-16118210)
chr5 (772-821)||(41339562-41339611)
chr5 (770-838)||(16117959-16118027)
chr5 (737-821)||(33735328-33735412)
chr5 (770-821)||(12628340-12628391)
chr5 (770-833)||(22533586-22533649)
chr5 (770-833)||(33735509-33735572)
chr5 (770-832)||(6421819-6421881)
[»] chr7 (31 HSPs)
chr7 (725-837)||(20947192-20947304)
chr7 (724-833)||(5280543-5280652)
chr7 (758-838)||(5636331-5636411)
chr7 (737-838)||(34454765-34454866)
chr7 (724-822)||(5636040-5636137)
chr7 (725-826)||(27557858-27557959)
chr7 (737-838)||(34454482-34454583)
chr7 (737-838)||(47081845-47081946)
chr7 (737-821)||(12931023-12931107)
chr7 (737-821)||(43938179-43938263)
chr7 (724-836)||(44545867-44545979)
chr7 (759-833)||(47121585-47121659)
chr7 (737-821)||(12929539-12929623)
chr7 (737-813)||(20947479-20947555)
chr7 (737-817)||(23191139-23191218)
chr7 (737-833)||(27558137-27558233)
chr7 (737-835)||(35262627-35262725)
chr7 (504-595)||(20117951-20118045)
chr7 (737-838)||(26825628-26825729)
chr7 (737-838)||(26825915-26826016)
chr7 (741-821)||(5280287-5280367)
chr7 (769-821)||(5636149-5636201)
chr7 (770-838)||(7159246-7159314)
chr7 (724-843)||(15827993-15828113)
chr7 (737-821)||(43937909-43937993)
chr7 (770-833)||(27557973-27558036)
chr7 (770-833)||(34454676-34454739)
chr7 (740-839)||(37563642-37563741)
chr7 (770-836)||(47082040-47082106)
chr7 (770-843)||(19980211-19980284)
chr7 (737-818)||(37563372-37563453)
[»] scaffold0233 (1 HSPs)
scaffold0233 (724-833)||(8436-8545)
[»] scaffold0206 (1 HSPs)
scaffold0206 (737-838)||(10323-10424)
[»] scaffold0202 (2 HSPs)
scaffold0202 (724-836)||(14235-14347)
scaffold0202 (737-833)||(14519-14615)
[»] scaffold0279 (3 HSPs)
scaffold0279 (725-826)||(11130-11231)
scaffold0279 (737-833)||(10856-10952)
scaffold0279 (770-833)||(11053-11116)
[»] scaffold1493 (2 HSPs)
scaffold1493 (737-796)||(878-937)
scaffold1493 (770-833)||(789-852)
[»] scaffold0022 (1 HSPs)
scaffold0022 (770-821)||(120324-120375)
[»] scaffold0321 (1 HSPs)
scaffold0321 (770-832)||(10787-10849)


Alignment Details
Target: chr4 (Bit Score: 369; Significance: 0; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 184 - 595
Target Start/End: Complemental strand, 45199780 - 45199368
Alignment:
Q  184 gacacttacgtgtcttaaagcttaaatgatctcttcttactttataaattattttgacgagaaagaaatattggttaggtgagagataaaaataaagtaa 283  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  45199780 gacacttatgtgtcttaaagcttaaatgatctcttcttactttataaattattttgacgagaaagaaagattggttaggagagagataaagataaagtaa 45199681  T
Q  284 ctaaaaatattgaacttaaagtcatcgaagtgttac-ctaaacctaacagatacatgtcaattttatatatatccgatatttaaaaaattaataaaccaa 382  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45199680 ctaaaaatacttaacttaaagtcatcgaagtgttactctaaacctaatatatacatgtcaattttatatatatccgatatttaaaaaattaataaaccaa 45199581  T
Q  383 atatatattgacgaaaactatctaagacacaacaagtaagtactacaaatacaaaactcaaaatagacatacaatatcaaagccaactcaaatacaagct 482  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45199580 atatatattgacgaaaactatctaagacacaacaagtaagtactacaaatacaaaactcaaaatagacatacaatatcaaagccaactcaaatacaagct 45199481  T
Q  483 agcacacaaccaatacaacacgattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccc 582  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45199480 agcacacaaccaatacaacacgattagagtagatccacttgtactgatttatcacgatgtattttcatttgagttttcctaggtcaggtcttatgtcccc 45199381  T
Q  583 tagtctttgtatc 595  Q
    |||||||||||||    
T  45199380 tagtctttgtatc 45199368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 643 - 911
Target Start/End: Complemental strand, 45199320 - 45199053
Alignment:
Q  643 tacaacaccacctaccaaaaagaactgtacatgtacactcagaccaaggaagattaacacataataggatagtaacttcatggaccatttttctaatgat 742  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  45199320 tacaacaccacctaccaaaaagaactgtacatgtacacccagaccaaggaagattaacacataataggatagtaatttcatggaccatttttcaaatgat 45199221  T
Q  743 taatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaaccttgatt 842  Q
    |||||||||||||  || |||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  45199220 taatatttgcactgtcatattgaaaggattagtaacttcagagacgaaaattcagatgatttatatttgcggggacgaaagacccttttaaaccttgatt 45199121  T
Q  843 taaacttgaatccttttaacatttgatttgaactgccaccgtgacatgaattagatatattctaagcat 911  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45199120 taaacttgaatcc-tctaacatttgatttgaactgccaccatgacatgaattagatatattctaagcat 45199053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 45199924 - 45199811
Alignment:
Q  9 gtagtaacttaacttgtgatgcatgcaggtcaaggtagggccactactatagttttggtacttttgatatggttcaattgaggattacgtagcttctaag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45199924 gtagtaacttaacttgtgatgcatgcaggtcaaggtagggccactactatagttttggtacttttgatatggttcaattgaggattacgtagcttctaag 45199825  T
Q  109 ggacacccatatgt 122  Q
    |||||| |||||||    
T  45199824 ggacacacatatgt 45199811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 724 - 839
Target Start/End: Original strand, 35730933 - 35731048
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||| ||||||| ||||||||||||||||| | ||| | |||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |    
T  35730933 ggactatttttcaaatgattaatatttgcaatgacataatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaag 35731032  T
Q  824 acccatttaaaccttg 839  Q
    ||| | ||||||||||    
T  35731033 acctacttaaaccttg 35731048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 726 - 833
Target Start/End: Original strand, 37678122 - 37678229
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 825  Q
    |||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||| | ||   ||||||||||||||||||| |||    
T  37678122 accatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaatttaaatggcttatatttgcagggacgaaagac 37678221  T
Q  826 ccatttaa 833  Q
    | ||||||    
T  37678222 ctatttaa 37678229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 724 - 838
Target Start/End: Complemental strand, 8287044 - 8286930
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  || | |||||| |||| |||||||||||||||||||||| ||   ||||||||||||||||||| |    
T  8287044 ggaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaag 8286945  T
Q  824 acccatttaaacctt 838  Q
    ||| |||||| ||||    
T  8286944 acctatttaagcctt 8286930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 726 - 840
Target Start/End: Original strand, 50246132 - 50246246
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 825  Q
    |||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||| ||| ||     
T  50246132 accatttttcaaatgattaatatttgcagtgacagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagat 50246231  T
Q  826 ccatttaaaccttga 840  Q
    | |||||| ||||||    
T  50246232 ctatttaagccttga 50246246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 47981921 - 47982005
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  47981921 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaa 47982005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 758 - 838
Target Start/End: Original strand, 48507723 - 48507803
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    ||||||||||| ||||||||||||||||||||||||||| || |  |||||||| ||||||||| |||| |||||||||||    
T  48507723 cagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaaacctt 48507803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 54961530 - 54961429
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||  | |||||||||||||||||| |||| |||||| ||    
T  54961530 aatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 54961431  T
Q  837 tt 838  Q
    ||    
T  54961430 tt 54961429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 13872354 - 13872438
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||| |||||||| |||   ||||||||||||||||||    
T  13872354 aatgattaatatttgcaggggcagattggaagaattagtaacttcagggacaaaaattcaaatagactatatttgcagggacgaa 13872438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 725 - 821
Target Start/End: Original strand, 19916929 - 19917025
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||| ||||||||||||||||| |  ||||||| ||  ||||||||||||| ||||||||||| | || |  ||||||||||||||||||    
T  19916929 gaccatttttcaaatgattaatatttgcagtggcagattgaaatgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaa 19917025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 47862251 - 47862155
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||| ||||||||    ||||||||||| ||||||||||||||||||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  47862251 aatgattagtatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaa 47862155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 47980784 - 47980688
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||   | |||||||||| || ||||||||||| |||||||||||| ||  | |||||||||||||||||| |||| ||||||    
T  47980784 aatgattaatatttgcagggatagattggaaggatcagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 47980688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 8287218 - 8287319
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| |||||||||||| ||    |||||||||||||||||| |||| |||||| ||    
T  8287218 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 8287317  T
Q  837 tt 838  Q
    ||    
T  8287318 tt 8287319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 12691505 - 12691409
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||| |   |||||||||||| |||||||||||||| |||||||||||| ||    |||||||||| ||||||| |||| ||||||    
T  12691505 aatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaagacctatttaa 12691409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 19916755 - 19916671
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||| | |||||||| | || |  ||||||||||||||||||    
T  19916755 aatgattaatatttgcagtggcagattggaaggattagtaacttcaggggcgaaaatttaaatgacctatatttgcagggacgaa 19916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 22249832 - 22249748
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||||| || || ||||||||||||||||||    
T  22249832 aatgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaa 22249748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 12691690 - 12691791
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    | ||||||||| |||||||||||||| ||| |||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  12691690 aatgattaatatttgcaggggcggattggaaggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaaccc 12691789  T
Q  837 tt 838  Q
    ||    
T  12691790 tt 12691791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 777 - 838
Target Start/End: Complemental strand, 35730721 - 35730660
Alignment:
Q  777 acttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    |||||||||||||||||||| || | ||||||||||||||||||| |||| |||||| ||||    
T  35730721 acttcagagacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaagcctt 35730660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 53559672 - 53559773
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||| |||  |||||| ||    
T  53559672 aatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 53559771  T
Q  837 tt 838  Q
    ||    
T  53559772 tt 53559773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 22250018 - 22250102
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| ||    ||||||||||||||||||    
T  22250018 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaa 22250102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 37677947 - 37677851
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||  |||||| |  ||||| ||||| |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  37677947 aatgattaaattttgcagtggcagatcggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaa 37677851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 837
Target Start/End: Complemental strand, 50245956 - 50245856
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||  || ||||||||| || |  ||||||| |||||||||| || | |||||||||    
T  50245956 aatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaagatctatttaaacc 50245857  T
Q  837 t 837  Q
    |    
T  50245856 t 50245856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 796
Target Start/End: Complemental strand, 20086536 - 20086477
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||    
T  20086536 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattca 20086477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 832
Target Start/End: Complemental strand, 34238569 - 34238474
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattta 832  Q
    |||||||||||||||||    || |||| ||| ||||||||||||||||||||||||||| |||   ||||||| || ||||||| |||| |||||    
T  34238569 aatgattaatatttgcaggggcatattgaaaggattagtaacttcagagacgaaaattcaaatagcctatatttacaaggacgaaagacctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 37678107 - 37678044
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  37678107 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 37678044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 821
Target Start/End: Original strand, 48507539 - 48507590
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||| |||||||||||| || | |||||||||||||||||||    
T  48507539 attagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaa 48507590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 724 - 826
Target Start/End: Complemental strand, 20601059 - 20600957
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||| ||||||| ||| ||||||| ||||| |  || |||||||||||||| ||||||| | ||||||||||| || |  |||||||| ||||||||| |    
T  20601059 ggacaatttttcaaattattaatagttgcagtggcaaattggaagaattagcaacttcaaaaacgaaaattcaaatgacctatatttgaagggacgaaag 20600960  T
Q  824 acc 826  Q
    |||    
T  20600959 acc 20600957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 821
Target Start/End: Complemental strand, 13872144 - 13872084
Alignment:
Q  761 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| |||| ||||||||  |||||||||||| ||||  ||||||||||||||||||    
T  13872144 attggaaggattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaa 13872084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 726 - 818
Target Start/End: Complemental strand, 27813159 - 27813067
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    |||||||||| |||||||| |||||||| | ||| | |||||| || ||||||||||  ||  |||||||| || | ||||||||||||||||    
T  27813159 accatttttcaaatgattagtatttgcaatgacaaaatggaaggatcagtaacttcatggataaaaattcaaatgacttatatttgcagggac 27813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 725 - 833
Target Start/End: Complemental strand, 32846473 - 32846365
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||||| |  || | |||||| |||| |||||||||  ||||||||||| ||    |||||||||| | ||||| ||    
T  32846473 gaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaaga 32846374  T
Q  825 cccatttaa 833  Q
    || ||||||    
T  32846373 cctatttaa 32846365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 817
Target Start/End: Original strand, 33294428 - 33294508
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||||||||||||||||    ||||| ||||| |||||||||||||| |||||||||||| ||    ||||||||||||||    
T  33294428 aatgattaatatttgcaggggcagatcggaaggattagtaacttcagggacgaaaattcaaattgcctatatttgcaggga 33294508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 8287057 - 8287120
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||| ||||| |||| ||||||    
T  8287057 attagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 8287120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 19740926 - 19740863
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||| ||||||| |||| ||||||    
T  19740926 attagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaa 19740863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 593
Target Start/End: Original strand, 21121943 - 21122002
Alignment:
Q  534 tcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccctagtctttgta 593  Q
    ||||||||||||  |||||||||||||||||||||||||  ||| ||||  |||||||||    
T  21121943 tcacgatgtattcccgtttgagttttcctaggtcaggtccaatgcccccccgtctttgta 21122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 26601335 - 26601272
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||| |||||||||||||||||||||| || | ||||||||| ||||| ||| |||| ||||||    
T  26601335 attaataacttcagagacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaa 26601272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 778 - 833
Target Start/End: Original strand, 27813181 - 27813236
Alignment:
Q  778 cttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||| |||||||||||| || || |||||||||||||||||| |||| ||||||    
T  27813181 cttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaa 27813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 47862277 - 47862340
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  47862277 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 47862340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 821
Target Start/End: Original strand, 54961737 - 54961800
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||| ||| |||||||||||||| ||| |||||||| || |  ||||||||||||||||||    
T  54961737 cagattgaaaggattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaa 54961800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 818
Target Start/End: Complemental strand, 33294243 - 33294162
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    |||||||||||||||||    || |||||||| |||||||||||||  ||| |||||||| ||||  |||||||||| ||||    
T  33294243 aatgattaatatttgcaggggcaaattggaaggattagtaacttcatggacaaaaattcaaataacctatatttgcatggac 33294162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 760 - 833
Target Start/End: Complemental strand, 37732373 - 37732300
Alignment:
Q  760 gattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||| |||| ||||||||||||| | ||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  37732373 gattagaaggattagtaacttcaaaaacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaa 37732300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 3e-26; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 724 - 833
Target Start/End: Complemental strand, 30803958 - 30803849
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || |  |||| ||| ||||||||| |    
T  30803958 ggaccatttttcaattgattaatatttgcagtgacagattggaagaattagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaag 30803859  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  30803858 acctatttaa 30803849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 737 - 837
Target Start/End: Original strand, 21300418 - 21300518
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||| ||   ||||| || ||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||| |||||||||    
T  21300418 aatgattaatatttacagggacagactgaaaggattagtaacttcagagacgaaaattcaaataacatatatttgcagggacgaaagacctatttaaacc 21300517  T
Q  837 t 837  Q
    |    
T  21300518 t 21300518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 33458203 - 33458299
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| | ||||||| |||| |||||||||||||| ||||| |||||| || |  |||||||||||||||||| |||| ||||||    
T  33458203 aatgattaatatttgcagtgacagattagaaggattagtaacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaa 33458299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 1741486 - 1741402
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  1741486 aatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 1741402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 30804133 - 30804217
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||  ||||||||||| || || |||||||  |||||||||    
T  30804133 aatgattaatatttgcagtgacagattggaaggattagtaacttcaggaacgaaaattcaaatgatatatatttaaagggacgaa 30804217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 726 - 838
Target Start/End: Complemental strand, 33458026 - 33457914
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 825  Q
    |||||||||| ||||||||||||||||| | ||| |||  ||| |||||||||||||||| | |||||||| || ||  |||||| || ||||||| |||    
T  33458026 accatttttcaaatgattaatatttgcagtgacatattaaaaggattagtaacttcagaggcaaaaattcaaatgatccatatttacatggacgaaagac 33457927  T
Q  826 ccatttaaacctt 838  Q
    | |||||||||||    
T  33457926 ctatttaaacctt 33457914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 578
Target Start/End: Original strand, 28421480 - 28421555
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagtt-ttcctaggtcaggtcttatgt 578  Q
    |||||||||||||||||||| |||| ||||||||| ||||||| || ||||||| |||||||||||||||| ||||    
T  28421480 gattagagtagatccacttggactgttttatcacgttgtatttccgcttgagttattcctaggtcaggtctaatgt 28421555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 737 - 836
Target Start/End: Complemental strand, 55036768 - 55036669
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||  | ||||||||| || |  |||||||||||||||||| |||| |||||||||    
T  55036768 aatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaaacc 55036669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 737 - 831
Target Start/End: Complemental strand, 40256973 - 40256879
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattt 831  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||||  |||||||||| ||||||| |||| ||||    
T  40256973 aatgattaatatttgcaagggcatattggaaggattagtaacttcagggacgaaaattcaaataacctatatttgcatggacgaaagacctattt 40256879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 47005624 - 47005546
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccc 582  Q
    |||||||||||||||||||| |||| ||||||||||||||||   ||||| ||| ||||||||| |||| |||||||||    
T  47005624 gattagagtagatccacttggactgctttatcacgatgtattcctgtttgggttatcctaggtctggtcctatgtcccc 47005546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 10749417 - 10749321
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||   | ||||| |||| |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||| ||||||    
T  10749417 aatgattaatatttgcagggatagattagaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacctatttaa 10749321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 10998158 - 10998242
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||| ||||||    
T  10998158 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaa 10998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 726 - 826
Target Start/End: Original strand, 30654754 - 30654853
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 825  Q
    |||||||||| ||||||||||||| ||| |  |||||| |||| || |||||||||| ||||||||||||| || |  |||||||||||||||||| |||    
T  30654754 accatttttcaaatgattaatatt-gcagtggcagattagaaggatcagtaacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagac 30654852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 837
Target Start/End: Original strand, 55036954 - 55037054
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||   ||||||||||| || |  |||||||||||||||||| |||  |||||||||    
T  55036954 aatgattaatatttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaaacc 55037053  T
Q  837 t 837  Q
    |    
T  55037054 t 55037054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 725 - 796
Target Start/End: Original strand, 46670528 - 46670599
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    ||||||||||  ||||||||||||||||| | ||| | ||||||||||||||||||||| || |||||||||    
T  46670528 gaccattttttaaatgattaatatttgcaatgacaaaatggaagaattagtaacttcagggatgaaaattca 46670599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 582
Target Start/End: Complemental strand, 3369391 - 3369313
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccc 582  Q
    ||||| |||||||||||||  |||| ||||||||| ||||||  |||||| ||| |||| |||||||||||||||||||    
T  3369391 gattaaagtagatccacttagactgctttatcacgctgtattcccgtttgggttatcctgggtcaggtcttatgtcccc 3369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 724 - 821
Target Start/End: Original strand, 21255803 - 21255900
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||| |||||||||||||| || |  || | |||||| ||||||||||| |  |||||||||||| || || |||||||||||| |||||    
T  21255803 ggaccatttttcaaatgattaatatttacaatggcaaaatggaagcattagtaactttatggacgaaaattcaaatgatctatatttgcaggaacgaa 21255900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 796
Target Start/End: Complemental strand, 33989126 - 33989054
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||||||| ||| ||||||||||||| |  ||||||||||| ||||||||||| ||  |||||||||||    
T  33989126 ggaccatttttcaaataattaatatttgcagtggcagattggaaggattagtaacttaaggtacgaaaattca 33989054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 796
Target Start/End: Original strand, 24576580 - 24576639
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||||||||||||||  ||||||||||| |||||||| |||| ||| |||||||||    
T  24576580 aatgattaatatttgcactggcagattggaaggattagtaatttcaaagatgaaaattca 24576639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 595
Target Start/End: Original strand, 41907329 - 41907399
Alignment:
Q  526 ctgatttatcacgatgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccctagtctttgtatc 595  Q
    ||||||||||| | |||||||||||||| ||| ||||| |||||||||| |||||||| | ||||||||||    
T  41907329 ctgatttatcatgctgtattttcgtttgggttattcctgggtcaggtctgatgtcccccaatctttgtatc 41907399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 49724 - 49667
Alignment:
Q  761 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    ||||||||||||||||| ||||| ||||||| |||| |||  ||||||||||||||||    
T  49724 attggaagaattagtaatttcagggacgaaatttcaaatagcttatatttgcagggac 49667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 51279330 - 51279229
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||| ||  |||||||||||| | |||||||||||| ||||  |||||||||||||||||| |||  |||||| ||    
T  51279330 aatgattaatatttgcaggggcaaattgaaatgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 51279231  T
Q  837 tt 838  Q
    ||    
T  51279230 tt 51279229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 10749681 - 10749765
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||     ||||||||||  |||||||||||||| |||||||||| | || |  ||||||||||||||||||    
T  10749681 aatgattaatatttgctgaggcagattggaaagattagtaacttcagggacgaaaatttaaatgacctatatttgcagggacgaa 10749765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 22129105 - 22129009
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| |||   ||||||| | |||| ||| |||| ||||||    
T  22129105 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaatagcctatatttacggggatgaaagacctatttaa 22129009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 728 - 833
Target Start/End: Complemental strand, 24576398 - 24576291
Alignment:
Q  728 catttttctaatgattaatattt--gcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 825  Q
    |||||||| |||||||||| |||  ||| |  |||||| |||| |||||||| ||||  |||||||||||| ||   ||||||||||||||||||| |||    
T  24576398 catttttcaaatgattaatttttttgcagttgcagattagaaggattagtaatttcatggacgaaaattcaaatggcttatatttgcagggacgaaagac 24576299  T
Q  826 ccatttaa 833  Q
    | ||||||    
T  24576298 ctatttaa 24576291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 40257158 - 40257242
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||  |||||||| ||||| |||||||||||| |||| ||||||||  |||||||||    
T  40257158 aatgattaatatttgcaggggcagattgaaatgattagtaatttcagggacgaaaattcaaataacttatatttatagggacgaa 40257242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Original strand, 30890332 - 30890383
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||| |||||||||||| || | |||||||||| ||||||||    
T  30890332 attagtaacttcagggacgaaaattcaaatgacttatatttgctgggacgaa 30890383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 33458041 - 33458104
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||| ||||||||||||||| || |  |||||||| ||||||||| |||| ||||||    
T  33458041 attagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 33458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 55036794 - 55036857
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  55036794 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 55036857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 833
Target Start/End: Original strand, 28310620 - 28310729
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  || | |||||  ||||||||||| || | |||| ||||| || |  ||||||||| || ||||| |    
T  28310620 ggaccatttttcaaatgattaatatttgcaatggcaaaatggaaagattagtaactttagggtcgaagattcaaatgacctatatttgctggaacgaaag 28310719  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  28310720 acctatttaa 28310729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 6e-24; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 724 - 833
Target Start/End: Complemental strand, 7612660 - 7612551
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| | ||| | || |||||||||||||||||| |||||||||||| ||  | |||||||||||||||||| |    
T  7612660 ggaccatttttcaaatgattaatatttgcaatgacaaaatgaaagaattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaag 7612561  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  7612560 acctatttaa 7612551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 726 - 821
Target Start/End: Original strand, 3299833 - 3299928
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  3299833 accatttttcaaatgattaatatttgcaatggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaa 3299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 724 - 838
Target Start/End: Original strand, 19296499 - 19296613
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |   ||||||| | |||||||||||||||  ||||||||||| || |  |||||||||| ||||||| |    
T  19296499 ggaccatttttcaaatgattaatatttgcagtggtagattggcaaaattagtaacttcaggaacgaaaattcaaatgacatatatttgcaaggacgaaag 19296598  T
Q  824 acccatttaaacctt 838  Q
    ||| |||||||||||    
T  19296599 acctatttaaacctt 19296613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 737 - 839
Target Start/End: Complemental strand, 32337663 - 32337561
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||  | |||||||||||||||||| |||| |||||||||    
T  32337663 aatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaaacc 32337564  T
Q  837 ttg 839  Q
    |||    
T  32337563 ttg 32337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 20774366 - 20774467
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||  |||||| |  ||||||| |||||||||||||||||||||||||||| || || |  ||||||||||| |||||| |||| |||||| ||    
T  20774366 aatgattaaattttgcagtggcagattgaaagaattagtaacttcagagacgaaaatacaaatgacctatatttgcagagacgaaagacctatttaagcc 20774465  T
Q  837 tt 838  Q
    ||    
T  20774466 tt 20774467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 26503639 - 26503740
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||||||||||||| |  | ||||||||| |||| ||||||||  |||||||||||| || | |||||||||||||||||||  ||| |||||| ||    
T  26503639 aatgattaatatttgcagtggcggattggaaggattaataacttcatggacgaaaattcaaatgacttatatttgcagggacgaaaaacctatttaagcc 26503738  T
Q  837 tt 838  Q
    ||    
T  26503739 tt 26503740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 3299658 - 3299562
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| |  || |||||||  |||||||||||||  |||||||||||| || | |||||||||||| |||||| |||| ||||||    
T  3299658 aatgattaatatttgcaatggcaaattggaatgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaa 3299562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 13480307 - 13480223
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  13480307 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 13480223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 20994976 - 20995072
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| || | || ||||||||| |||||| |||| ||||||    
T  20994976 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagacctatttaa 20995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 21880463 - 21880379
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| ||||||||||||||||||||||||||| || | |||||||| |||| |||||    
T  21880463 aatgattaatatttgcaggggcagattgaaaggattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaa 21880379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 23292029 - 23292113
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||   | |||||||||| |||||||||||||| |||||||||||| || |  |||||||||| |||||||    
T  23292029 aatgattaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaa 23292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 30234877 - 30234961
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| | ||  ||||||||||||||||||    
T  30234877 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaa 30234961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 759 - 838
Target Start/End: Original strand, 15819797 - 15819876
Alignment:
Q  759 agattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    |||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||||    
T  15819797 agattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctt 15819876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 5064434 - 5064350
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    || ||||| || |||||||||||||| |||||||||||| || | |||||||| ||||||||||    
T  5064434 aatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaa 5064350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 769 - 833
Target Start/End: Complemental strand, 5064595 - 5064531
Alignment:
Q  769 aattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||| |||||||||||| || || |||||||||||||| ||| |||| ||||||    
T  5064595 aattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaa 5064531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 838
Target Start/End: Original strand, 16704615 - 16704695
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    ||||||||||| |||||||||||||  |||||||||||| ||    |||||||||||||||||| |||| |||||| ||||    
T  16704615 cagattggaaggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcctt 16704695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 20994917 - 20994834
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    |||||| |||| ||||||||||||||||||||||||||| || |  ||||||| ||||||||||    
T  20994917 aatgattaatatttgcaggg-cagattagaaggattagtaacttcagagacgaaaattcaaatgaactatatttacagggacgaa 20994834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 21880649 - 21880745
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||| ||||||||||||   | |||||||||| |||||||||||||| |||||||||||| ||    |||||||| ||||||||| |||| ||||||    
T  21880649 aatgcttaatatttgcagggatagattggaaggattagtaacttcagggacgaaaattcaaattgcatatatttggagggacgaaagacctatttaa 21880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 758 - 821
Target Start/End: Original strand, 738003 - 738066
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  738003 cagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaa 738066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 836
Target Start/End: Original strand, 5064620 - 5064719
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| ||||||||| |||| |||||||||||| ||    ||||||||||| |||||| |||  |||||||||    
T  5064620 aatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaaacc 5064719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 821
Target Start/End: Complemental strand, 21544584 - 21544533
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||||||||||||| || |  ||||||||||||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaa 21544533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 32337689 - 32337752
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  32337689 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 32337752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 724 - 834
Target Start/End: Complemental strand, 20774201 - 20774091
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| | ||| | || ||| |||| ||||||||  |||||||||||| || |  |||||||| | ||| ||| |    
T  20774201 ggaccatttttcaaatgattaatatttgcaatgacaaaatgaaaggattaataacttcaaggacgaaaattcaaatgacatatatttgtaaggatgaaag 20774102  T
Q  824 acccatttaaa 834  Q
    ||| |||||||    
T  20774101 acctatttaaa 20774091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 810
Target Start/End: Original strand, 1066416 - 1066497
Alignment:
Q  729 atttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatattt 810  Q
    ||||||| ||||||||||||||||| |  || | |||||  |||||||||||||| |||||||||||| || || |||||||    
T  1066416 atttttcaaatgattaatatttgcaatggcaaaatggaaatattagtaacttcagggacgaaaattcaaatgatctatattt 1066497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 818
Target Start/End: Original strand, 22494165 - 22494246
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    ||||||| |||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||    
T  22494165 aatgattgatatttgcaggggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggac 22494246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 826
Target Start/End: Original strand, 26542905 - 26542994
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 826  Q
    ||||||||||||||||  |  | ||||| ||  ||||||||||||||||||||||| ||| || |  |||||||||||||||||| ||||    
T  26542905 aatgattaatatttgcggtggccgattgaaattattagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaagacc 26542994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 826
Target Start/End: Original strand, 31879743 - 31879832
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 826  Q
    |||||||||  |||||| |||||||||||||  |||||||||||||| || | ||||||| || |  |||||||| ||||||||| ||||    
T  31879743 aatgattaaattttgcagtaacagattggaattattagtaacttcagggatgcaaattcaaatgacctatatttgtagggacgaaagacc 31879832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 9607601 - 9607685
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    || ||| |||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  9607601 aatgattaatatttgcaggggcatattagaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaa 9607685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 13480493 - 13480577
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| |    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||| || |||||||    
T  13480493 aatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaa 13480577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 15484943 - 15485035
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccct-agtctttgtatc 595  Q
    ||||||||||||||||  |  ||||||||||||||||||||| || |||| ||||||||  ||||| |||  |||| ||| ||||||||||||    
T  15484943 gattagagtagatccatcttaactgatttatcacgatgtattctcatttgggttttcctgagtcagatctattgtctcctcagtctttgtatc 15485035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 23291843 - 23291759
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| ||    |||||||| |||||||||    
T  23291843 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaa 23291759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 7612673 - 7612736
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||| | ||| |||||||||||| || | ||||||||||||||||||| |||| ||||||    
T  7612673 attagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 7612736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 817
Target Start/End: Original strand, 22494005 - 22494052
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||||||||||||| |||||||||||| ||||  ||||||||||||||    
T  22494005 attagtaacttcagggacgaaaattcaaataacctatatttgcaggga 22494052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 23291869 - 23291932
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  23291869 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 23291932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 26542742 - 26542805
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || || |||||||||||  ||||| |||| ||||||    
T  26542742 attagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaa 26542805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 737 - 843
Target Start/End: Complemental strand, 20561027 - 20560921
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||  |||| ||||| ||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  20561027 aatgattaatatttgcaggggcagattgaaatgattaataactacagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 20560928  T
Q  837 ttgattt 843  Q
    || ||||    
T  20560927 ttcattt 20560921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 737 - 815
Target Start/End: Original strand, 32337852 - 32337930
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagg 815  Q
    |||||||||||||||||    || |||||||| || ||||||||||| |||||||||||| || |  ||||||||||||    
T  32337852 aatgattaatatttgcaggggcatattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagg 32337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 833
Target Start/End: Complemental strand, 18865216 - 18865123
Alignment:
Q  740 gattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |  ||  ||||||| ||||||||||| | ||||||||||||| || | || |||||| |||||| || |||| ||||||    
T  18865216 gattaatatttgcagtggcaatttggaaggattagtaactttatagacgaaaattcaaatgacttgtatttgtagggactaaagacctatttaa 18865123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 796
Target Start/End: Complemental strand, 26542729 - 26542656
Alignment:
Q  724 ggaccatttttctaatgattaa-tatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||| ||||||| ||||||||| |||||||| |  ||||||| ||  |||||||||||||| ||||||||||||    
T  26542729 ggacgatttttcaaatgattaaatatttgcagtggcagattgaaatgattagtaacttcagggacgaaaattca 26542656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 6e-24; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 724 - 833
Target Start/End: Original strand, 22309703 - 22309812
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||| |||||||||||| || |  |||||||||||||| ||| |    
T  22309703 ggaccatttttcaaatgattaatatttgcagtgtcagattggaacaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaag 22309802  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  22309803 acctatttaa 22309812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 833
Target Start/End: Original strand, 9694014 - 9694123
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| | ||| | |||||| |||||||||||||| |||||||||||| || |  |||||||||| ||||||| |    
T  9694014 ggaccatttttcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaag 9694113  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  9694114 acctatttaa 9694123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 837
Target Start/End: Complemental strand, 28599539 - 28599426
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  || | |||||| |||||||||||||  |||||||||||| || || |||||||||| ||||||| |    
T  28599539 ggaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaag 28599440  T
Q  824 acccatttaaacct 837  Q
    ||| ||||||||||    
T  28599439 acctatttaaacct 28599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 737 - 843
Target Start/End: Complemental strand, 19607016 - 19606910
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||   |||||||||||| |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||  ||||||||     
T  19607016 aatgattaatatttgcaacgacagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaaact 19606917  T
Q  837 ttgattt 843  Q
    |||||||    
T  19606916 ttgattt 19606910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 20911229 - 20911128
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  20911229 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 20911130  T
Q  837 tt 838  Q
    ||    
T  20911129 tt 20911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 737 - 843
Target Start/End: Original strand, 32519440 - 32519546
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||| ||||||||||||||  ||||||||||| || | ||||||||||||||||||| |||  |||||| ||    
T  32519440 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagcc 32519539  T
Q  837 ttgattt 843  Q
    || ||||    
T  32519540 tttattt 32519546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 1150036 - 1149935
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    | ||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||  ||| |||||| ||    
T  1150036 aatgattaatatttgcaggggccgattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaagcc 1149937  T
Q  837 tt 838  Q
    ||    
T  1149936 tt 1149935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 16367062 - 16366961
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||  |||||| ||    
T  16367062 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 16366963  T
Q  837 tt 838  Q
    ||    
T  16366962 tt 16366961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 22309530 - 22309429
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||| |||| |  ||||||||||| |||||||||||||  ||| |||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  22309530 aatgattaatatgtgcagtggcagattggaaggattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 22309431  T
Q  837 tt 838  Q
    ||    
T  22309430 tt 22309429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 817
Target Start/End: Complemental strand, 37984839 - 37984746
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||||||||||| ||| |||||||||| || |  || | |||||||||||||||||| | ||||||||||||| || || ||||||||||||||    
T  37984839 ggaccatttttcaaataattaatatttacaatggcaaaatggaagaattagtaactttatagacgaaaattcaaatgatatatatttgcaggga 37984746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 837
Target Start/End: Complemental strand, 8089551 - 8089451
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||| |||||||||    ||||||||||| ||||||||||||| ||||||||||||| || |  ||||||||||| ||||||  ||| |||||||||    
T  8089551 aatgattgatatttgcaggggcagattggaaggattagtaacttcaaagacgaaaattcaaatgacatatatttgcagagacgaaaaacctatttaaacc 8089452  T
Q  837 t 837  Q
    |    
T  8089451 t 8089451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 10446931 - 10446847
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  10446931 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 10446847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 28599712 - 28599808
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||  |||||| |  ||||||||||| ||| ||||||||||||||||||||||| || | |||||||| |||||| ||| |||| ||||||    
T  28599712 aatgattaaattttgcaatggcagattggaaggatttgtaacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaa 28599808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 32519254 - 32519170
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||  | || |||||||| |||||||| ||||| |||||||||||| || |  ||||||||||||||||||    
T  32519254 aatgattaatatttgcaggagcatattggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaa 32519170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 724 - 826
Target Start/End: Original strand, 5608866 - 5608968
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  || | || ||| ||||||||||| ||||| ||||||||| || || ||||||||| || ||||| |    
T  5608866 ggaccatttttcaaatgattaatatttgcaatggcaaaatgaaaggattagtaactttagagaggaaaattcaaatgatctatatttgctggaacgaaag 5608965  T
Q  824 acc 826  Q
    |||    
T  5608966 acc 5608968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 739 - 821
Target Start/End: Complemental strand, 9958922 - 9958840
Alignment:
Q  739 tgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| |  | ||||||||| ||||| |||||||  |||||||||||| || || ||||||||||||||||||    
T  9958922 tgattaatatttgcagtggctgattggaagcattagcaacttcattgacgaaaattcaaatgatctatatttgcagggacgaa 9958840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 725 - 835
Target Start/End: Original strand, 9959098 - 9959208
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||| | |  ||||||| ||| |||||||||||||  ||| |||||||| || |   ||||||||||||||||| ||    
T  9959098 gaccatttttcaaatgattaatatttgtagtggcagattgaaaggattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaaga 9959197  T
Q  825 cccatttaaac 835  Q
    |  ||||||||    
T  9959198 cttatttaaac 9959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 724 - 833
Target Start/End: Complemental strand, 17366738 - 17366629
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||  ||||||||||||||||| |  ||||||||||| |||| ||| ||||| || ||||||||| || |  |||||||||| ||| ||| |    
T  17366738 ggaccattttttaaatgattaatatttgcagtggcagattggaaggattattaaattcagggaagaaaattcaaatgacctatatttgcatggatgaaag 17366639  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  17366638 acctatttaa 17366629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 18477006 - 18476905
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| ||| |||||||| || |  |||| ||||||||||||| | || |||||||||    
T  18477006 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaaggcctatttaaacc 18476907  T
Q  837 tt 838  Q
    ||    
T  18476906 tt 18476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 16367248 - 16367332
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  16367248 aatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 16367332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 41846491 - 41846407
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||| |  |||||| |||| |||| ||||||||| |||||||||||| || |  |||||||| |||||||||    
T  41846491 aatgattaatatttgcagtggcagattagaaggattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaa 41846407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 728 - 796
Target Start/End: Original strand, 41846668 - 41846736
Alignment:
Q  728 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||| ||||||||||||||||| |  ||||||||||| | ||||||||||||  |||||||||||    
T  41846668 catttttcaaatgattaatatttgcagtggcagattggaaggagtagtaacttcaggaacgaaaattca 41846736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 763 - 838
Target Start/End: Complemental strand, 17284816 - 17284741
Alignment:
Q  763 tggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    |||||| ||||||||||||||| ||||||||||| || |  ||||||||||||||||||  ||| |||||| ||||    
T  17284816 tggaaggattagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcctt 17284741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 737 - 839
Target Start/End: Original strand, 22731817 - 22731919
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||   |||||||| ||| | |||||||||||  |||||||||||| ||    |||||||||||||||||| |||  |||||| ||    
T  22731817 aatgattaatatttgcagggacagattgaaaggaatagtaacttcacggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 22731916  T
Q  837 ttg 839  Q
    |||    
T  22731917 ttg 22731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 1150222 - 1150323
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||| |||||||| ||||| |||||||||||| || |  |||||||||||| ||||| |||  |||||| ||    
T  1150222 aatgattaatatttgcaggggcagattgaaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagcc 1150321  T
Q  837 tt 838  Q
    ||    
T  1150322 tt 1150323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 835
Target Start/End: Original strand, 17580453 - 17580518
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 835  Q
    |||||||||||||| |||||||||||| || || |||||||||| ||| ||| |||| ||||||||    
T  17580453 attagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagacctatttaaac 17580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 4375836 - 4375932
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||  |||||||||| | || |  |||||||||| ||||||| |||| ||||||    
T  4375836 aatgattaaattttgcagtggcagattggaaggattagtaacttcatggacgaaaatttaaatgacatatatttgcatggacgaaagacctatttaa 4375932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 17580427 - 17580331
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    || |||||||| |||| ||||||| | |||||||||||| ||| | ||||||| ||| |||||| |||| ||||||    
T  17580427 aatgattaatatttgcaggggcaaattggaaggattaataacttcggggacgaaaattcaaatagtctatatttacagagacgaaagacctatttaa 17580331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 20911415 - 20911498
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||  | ||||||||||  |||||||||||||| ||| |||||||| || |  ||||||| ||||||||||    
T  20911415 aatgattaatatttgcagga-cagattggaatgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaa 20911498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 22193559 - 22193519
Alignment:
Q  505 attagagtagatccacttgtactgatttatcacgatgtatt 545  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  22193559 attagagtagatccacttggactgatttatcacggtgtatt 22193519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 821
Target Start/End: Original strand, 37985036 - 37985096
Alignment:
Q  761 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| |||||||| |||||||||||||| ||| || |  ||||||||||||||||||    
T  37985036 attggaaggattagtaatttcagagacgaaaaatcaaatgacatatatttgcagggacgaa 37985096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 45663793 - 45663877
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    |||||| |||| |||||||||||||| |||||||||||| ||    ||||||| ||||||||||    
T  45663793 aatgattaatatttgcagggccagatttgaaggattagtaacttcagggacgaaaattcaaattgactatatttacagggacgaa 45663877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 5608853 - 5608790
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||| | ||||||||| | || | ||||||||||||||||||| |||| ||||||    
T  5608853 attagtaacttcataaacgaaaattaaaatgacttatatttgcagggacgaaagacctatttaa 5608790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 794
Target Start/End: Original strand, 17366909 - 17366964
Alignment:
Q  739 tgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaatt 794  Q
    ||||||||||||||| |  ||||||||||| ||||||||||| || ||||||||||    
T  17366909 tgattaatatttgcagtggcagattggaaggattagtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 32519280 - 32519343
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  32519280 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 32519343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Complemental strand, 41846651 - 41846600
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  41846651 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 41846600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 794
Target Start/End: Complemental strand, 9693841 - 9693784
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaatt 794  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| ||||||||||    
T  9693841 aatgattaaactttgcagtggcagattggaaggattagtaacttcagtgacgaaaatt 9693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 43681955 - 43681854
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||||||||||||| |  || | |||||  ||||||||||| |  |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  43681955 aatgattaatatttgcaatggcaaaatggaatgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 43681856  T
Q  837 tt 838  Q
    ||    
T  43681855 tt 43681854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 4e-22; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 724 - 838
Target Start/End: Complemental strand, 48380793 - 48380679
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| |||||||||| ||||||||  ||||||||||| |||||||||||||| |||||||||||| || |  ||||||| || ||||||| |    
T  48380793 ggaccatttttcaaatgattaatttttgcactggcagattggaaggattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaag 48380694  T
Q  824 acccatttaaacctt 838  Q
    ||| |||||| ||||    
T  48380693 acctatttaagcctt 48380679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 728 - 833
Target Start/End: Complemental strand, 33030442 - 33030337
Alignment:
Q  728 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgaccc 827  Q
    |||||||| ||||||| ||||||||| |  |||||||||||||||||||||||||| |||||||||||| || |  ||||||||||||||| || ||||     
T  33030442 catttttcaaatgattcatatttgcagtggcagattggaagaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacct 33030343  T
Q  828 atttaa 833  Q
    ||||||    
T  33030342 atttaa 33030337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 506 - 595
Target Start/End: Complemental strand, 18650225 - 18650135
Alignment:
Q  506 ttagagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgt-cccctagtctttgtatc 595  Q
    ||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||  ||||||||| ||||| |||| ||||||||||||    
T  18650225 ttagagtggatccacttggactgatttttcacgatgtatttccgtttgagttttcccgggtcaggtcctatgtccccccagtctttgtatc 18650135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 26953386 - 26953470
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||  | ||||||||| ||  ||||||||||||||||||||    
T  26953386 aatgattaatatttgcaagagcagattggaagaattagtaacttcaggaatgaaaattcaaatggtttatatttgcagggacgaa 26953470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 839
Target Start/End: Complemental strand, 33347515 - 33347413
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||||||||||| |    |||||||||||||||||||||||||| ||||||| |||| || | ||||||||||||||||||| |||  |||||| ||    
T  33347515 aatgattaatatttgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatgacttatatttgcagggacgaaagacatatttaagcc 33347416  T
Q  837 ttg 839  Q
    |||    
T  33347415 ttg 33347413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 49003160 - 49003261
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  49003160 aatgattaatatttgcagaggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 49003259  T
Q  837 tt 838  Q
    ||    
T  49003260 tt 49003261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 2953749 - 2953833
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  2953749 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 2953833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 25415129 - 25415213
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||| ||||||||||||  |||| |||||||| ||||||||||||||  ||||||||||| || | |||||||||||||||||||    
T  25415129 aatggttaatatttgcaggaacatattggaaggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaa 25415213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 26759635 - 26759725
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccctagtctttgtatc 595  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||| ||| |||||| ||||||| | |||||||| ||||||||||||    
T  26759635 gattagagtagatcca-ttggactgatttatcacgatgtattttcatttgggttattcctaagtcaggtttaatgtcccc-agtctttgtatc 26759725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 37152823 - 37152907
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| ||    ||||||||||||||||||    
T  37152823 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaa 37152907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 737 - 839
Target Start/End: Original strand, 1047489 - 1047591
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||||||||||||| || |  ||||||| |||||| ||| |||  |||||| ||    
T  1047489 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaagcc 1047588  T
Q  837 ttg 839  Q
    |||    
T  1047589 ttg 1047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 728 - 838
Target Start/End: Original strand, 8890485 - 8890595
Alignment:
Q  728 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgaccc 827  Q
    |||||||| ||||||||||||||||| | ||| |||||||  |||||| ||||||  |||||| ||||| || |  |||||||||||||||||| ||||     
T  8890485 catttttcaaatgattaatatttgcagtgacatattggaatgattagtcacttcatggacgaatattcaaatgacctatatttgcagggacgaaagacct 8890584  T
Q  828 atttaaacctt 838  Q
    |||||| ||||    
T  8890585 atttaagcctt 8890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 724 - 838
Target Start/End: Original strand, 24701541 - 24701655
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| |||| |||||||||| | |  || | |||||| |||||||||||||| |||||||||||| ||   ||||||||||||||| ||| |    
T  24701541 ggaccatttttcaaatggttaatatttgtaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaag 24701640  T
Q  824 acccatttaaacctt 838  Q
    ||| |||||| ||||    
T  24701641 acctatttaagcctt 24701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 826
Target Start/End: Original strand, 33347701 - 33347790
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 826  Q
    |||||||||||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| ||||    
T  33347701 aatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacc 33347790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 35312073 - 35311972
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||  |||||| | |||||||||||  |||||||||||||| |||||||||||| || |  |||||||  ||||||||| |||| |||||||||    
T  35312073 aatgattaaattttgcaatgacagattggaatgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaaacc 35311974  T
Q  837 tt 838  Q
    ||    
T  35311973 tt 35311972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 725 - 838
Target Start/End: Original strand, 35312249 - 35312362
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||||| | ||| | |||||| |||||||||| ||  |||||||||||| ||||  ||||||| |||| ||||| ||    
T  35312249 gaccatttttcaaatgattaatatttgcaatgacaaaatggaaggattagtaactccaaggacgaaaattcaaataagatatatttacaggaacgaaaga 35312348  T
Q  825 cccatttaaacctt 838  Q
    |  |||||| ||||    
T  35312349 cttatttaagcctt 35312362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 834
Target Start/End: Complemental strand, 49002975 - 49002878
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaa 834  Q
    |||||||||||||||||    ||||||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||  |||||||    
T  49002975 aatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaaa 49002878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 12577297 - 12577393
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||| | || | ||||||||||||||||||| |||| ||||||    
T  12577297 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaatttaaatgacttatatttgcagggacgaaagacctatttaa 12577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 19755690 - 19755786
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||  |||||||| || |  |||||||||||||||||| |||| ||||||    
T  19755690 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 19755786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 26953200 - 26953116
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||| ||| | |||||||||| |||||||    
T  26953200 aatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaa 26953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 46849943 - 46850039
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    || |||||||| || ||||||||||| |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  46849943 aatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 46850039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 739318 - 739217
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||||||| |||||||||||||  |||||||||||| ||  | ||||||||||||||||||  ||| |||||| ||    
T  739318 aatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacgaaaaacctatttaagcc 739219  T
Q  837 tt 838  Q
    ||    
T  739218 tt 739217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 24701369 - 24701268
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||| |||||| |||  |||||| ||    
T  24701369 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagcc 24701270  T
Q  837 tt 838  Q
    ||    
T  24701269 tt 24701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 770 - 835
Target Start/End: Complemental strand, 26953360 - 26953295
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 835  Q
    ||||||||||||||||||||||||||| || |  |||||||||||||| ||| |||| ||||||||    
T  26953360 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaaac 26953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 725 - 818
Target Start/End: Original strand, 52455028 - 52455121
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    ||||||||||| ||||||||||| ||||| |  ||||||||||| |||| |||||| |  |||||||||| | |||| ||||||||||| ||||    
T  52455028 gaccatttttcaaatgattaatagttgcagtggcagattggaaggattaataactttatggacgaaaatttaaataacttatatttgcatggac 52455121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 1040397 - 1040313
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||| |||||||| ||   ||||||||||| |||||||    
T  1040397 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaa 1040313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 1047303 - 1047219
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||| |||||||| ||   ||||||||||| |||||||    
T  1047303 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaa 1047219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 821
Target Start/End: Complemental strand, 5926594 - 5926534
Alignment:
Q  761 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  5926594 attggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 5926534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 5926806 - 5926902
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||| ||||||||    ||||||||| | |||||||||||||| || ||||||||| ||  | |||||||||||||||||| |||| ||||||    
T  5926806 aatgattactatttgcagaggcagattggacggattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 5926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 25414943 - 25414859
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||||| ||||||||| ||    |||||||| |||||||||    
T  25414943 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaa 25414859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 33030620 - 33030704
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||| |  ||||||| ||| |||||||| ||||  |||||||||||| || || |||||||||||| |||||    
T  33030620 aatgattaatatttgcagtggcagattgaaaggattagtaatttcatggacgaaaattcaaatgatctatatttgcaggaacgaa 33030704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 37152637 - 37152553
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| |||||||||   ||||||||||| |||||||||||||  |||||||||||| || |  |||||||| |||||||||    
T  37152637 aatgattagtatttgcacgggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaa 37152553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 725 - 796
Target Start/End: Original strand, 10019646 - 10019717
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    ||||||||||| ||||||||||||||||| |  || | |||||| |||||||||||||| || |||||||||    
T  10019646 gaccatttttcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattca 10019717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 508 - 583
Target Start/End: Complemental strand, 18628748 - 18628673
Alignment:
Q  508 agagtagatccacttgtactgatttatcacgatgtattttcgtttgagttttcctaggtcaggtcttatgtcccct 583  Q
    |||||||||||||||   || ||| |||||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  18628748 agagtagatccacttaggcttattcatcacgatatattcccgtttgggttttcctgggtcaggtcttatgtcccct 18628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 821
Target Start/End: Original strand, 33030459 - 33030510
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| ||||||||||| || || ||||||||||||||||||    
T  33030459 attagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaa 33030510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 759 - 821
Target Start/End: Original strand, 49990103 - 49990165
Alignment:
Q  759 agattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||| |||| |||| |||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  49990103 agatttgaaggattaataacttcaaagacgaaaattcaaatagtctatatttgcagggacgaa 49990165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 6056475 - 6056374
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||   ||| |||||||| || ||||| || || |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  6056475 aatgattaatatttgcagggacatattggaaggatcagtaattttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 6056376  T
Q  837 tt 838  Q
    ||    
T  6056375 tt 6056374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 553
Target Start/End: Complemental strand, 26924902 - 26924854
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacgatgtattttcgtttg 553  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26924902 gattagagtagatcca-ttggactgatttatcacgatgtattttcatttg 26924854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 826
Target Start/End: Original strand, 46364860 - 46364949
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 826  Q
    |||||||||||||||||    || |||| ||| |||||||| ||||  |||||||||||| |||| |||||||||||||| |||| ||||    
T  46364860 aatgattaatatttgcaggggcatattgaaaggattagtaatttcaaggacgaaaattcaaataacttatatttgcaggggcgaaagacc 46364949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 817
Target Start/End: Original strand, 46545003 - 46545096
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||| ||||||| ||||||||||||||||| |  || | |||||| |||||||||||||| ||||||| |||| || |  ||||||| ||||||    
T  46545003 ggactatttttcaaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatgacctatatttacaggga 46545096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 739503 - 739587
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||   |||||||| ||| |||||||||||||   ||||||||||| || |  ||||||||||| ||||||    
T  739503 aatgattaatatttgcagggacagattgaaaggattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaa 739587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 2953563 - 2953479
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| ||||||||||| || |||||||||||| || |  ||||||| ||||||||||    
T  2953563 aatgattaatatttgcaggggcagattgaaaggattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaa 2953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 29043040 - 29043124
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||| ||    ||||||||||| ||||||    
T  29043040 aatgattaatatttgcaggggcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaa 29043124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 29980923 - 29981019
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    || |||||||| |||||||||||| | |||||||||||| || |  ||||||||||  |||||| |||| ||||||    
T  29980923 aatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgcaaagacgaaagacctatttaa 29981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 836
Target Start/End: Complemental strand, 34176176 - 34176116
Alignment:
Q  776 aacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||  |||||||||||| || | ||||||||||||||||||| |||| |||||||||    
T  34176176 aacttcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaaacc 34176116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 46364673 - 46364589
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| |   |||||| | ||  |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  46364673 aatgattaatatttgtagggacagatggaaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 46364589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Complemental strand, 10019632 - 10019581
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||| |||||||| |||||||||||| || | |||||||||||||||||||    
T  10019632 attagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaa 10019581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 25415103 - 25415040
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||||||||||||| || |  |||||||||| ||| ||| |||| ||||||    
T  25415103 attagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagacctatttaa 25415040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Complemental strand, 30830390 - 30830339
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||| || |||||||||||| || | |||||||||||||||||||    
T  30830390 attagtaactttagggacgaaaattcaaatgacttatatttgcagggacgaa 30830339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 46364834 - 46364771
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  46364834 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 46364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 770 - 836
Target Start/End: Complemental strand, 35312235 - 35312169
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||  ||| |||||||| ||  | |||||||||||||||||| |||| |||||||||    
T  35312235 attagtaacttcatcgacaaaaattcaaatggtctatatttgcagggacgaaagacctatttaaacc 35312169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 758 - 820
Target Start/End: Complemental strand, 46849736 - 46849674
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacga 820  Q
    ||||||| |||||||| ||||||||| |||||||||||| || |  ||||||| |||||||||    
T  46849736 cagattgaaagaattaataacttcagggacgaaaattcaaatgacctatatttacagggacga 46849674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 818
Target Start/End: Original strand, 5183791 - 5183872
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    |||||||||||||||||    || |||||||| ||| |||||||||| |||||||||||| ||    |||||||||||||||    
T  5183791 aatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatatttgcagggac 5183872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 6056663 - 6056748
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaactt-cagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| ||||||||||| ||| || ||||||||| ||   |||||||||||||||||||    
T  6056663 aatgattaatatttgcaggggcagattgaaaggattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaa 6056748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 12577109 - 12577008
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||  ||||||||||||| ||||||||||||| ||    ||||||| |||||||||| |||  |||||| ||    
T  12577109 aatgattaatatttgcaggggcagattgaaatgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcc 12577010  T
Q  837 tt 838  Q
    ||    
T  12577009 tt 12577008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 772 - 833
Target Start/End: Complemental strand, 33347673 - 33347612
Alignment:
Q  772 tagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  33347673 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 33347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 2e-21; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 833
Target Start/End: Original strand, 40422432 - 40422541
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  |||||| |||| |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |    
T  40422432 ggaccatttttcaaatgattaatatttgcagtggcagatttgaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaag 40422531  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  40422532 acctatttaa 40422541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 40422259 - 40422163
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| |  ||||||||||| |||||| |||||||||||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  40422259 aatgattaatatttgcagtggcagattggaaggattagttacttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaa 40422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 737 - 835
Target Start/End: Original strand, 22763881 - 22763979
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 835  Q
    |||||||||||||| || | |||||||||||| ||||||||||||||||||||||||||| ||  ||||||  |||||||||||| || | ||||||||    
T  22763881 aatgattaatatttacaatgacagattggaaggattagtaacttcagagacgaaaattcaaatggtttatagctgcagggacgaaagatctatttaaac 22763979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 724 - 838
Target Start/End: Complemental strand, 37713808 - 37713694
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |   |||||| |||||||| ||||||||  |||||||||||| || | ||||||||  ||||||||| |    
T  37713808 ggaccatttttcaaatgattaatatttgcaatggtagattgaaagaattaataacttcatggacgaaaattcaaatgacttatatttatagggacgaaag 37713709  T
Q  824 acccatttaaacctt 838  Q
    ||| |||||||||||    
T  37713708 acctatttaaacctt 37713694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 29190444 - 29190545
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||||||  |||||||| ||  | |||||||||||||||||| |||| |||||||||    
T  29190444 aatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaagacctatttaaacc 29190543  T
Q  837 tt 838  Q
    ||    
T  29190544 tt 29190545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 20096119 - 20096018
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||||||| |||||||||||||| ||| |||||||| || |  |||||||||||||||||| |||| |||||||||    
T  20096119 aatgattaatatttgcagaggcaaattggaaggattagtaacttcagggacaaaaattcaaatgacatatatttgcagggacgaaagacctatttaaacc 20096020  T
Q  837 tt 838  Q
    ||    
T  20096019 tt 20096018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 40525606 - 40525505
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||| ||||| |||  |||||| ||    
T  40525606 aatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaacgaaagacttatttaagcc 40525507  T
Q  837 tt 838  Q
    ||    
T  40525506 tt 40525505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 41251222 - 41251121
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    ||||||||||||||| |   ||| |||||||| |||||||||||||||||||||||||||  | |  |||||||||||||||||| |||| |||||| ||    
T  41251222 aatgattaatatttgtagggacatattggaaggattagtaacttcagagacgaaaattcaattgacctatatttgcagggacgaaagacctatttaagcc 41251123  T
Q  837 tt 838  Q
    ||    
T  41251122 tt 41251121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 547720 - 547804
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| | |  ||||||||||| ||||||||||| || |||||||||||| || || ||||||||||||||||||    
T  547720 aatgattaatatttgtagtggcagattggaaggattagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaa 547804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 817
Target Start/End: Complemental strand, 29190259 - 29190179
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||||||||||||||||   | |||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||    
T  29190259 aatgattaatatttgcagggatagattggaaggattagtaacttcagagacgaaaattcagatggcctatatttgcaggga 29190179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 730 - 833
Target Start/End: Complemental strand, 9632434 - 9632331
Alignment:
Q  730 tttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccat 829  Q
    |||||| ||||||||||||||||| | ||| | |||||| |||||||||||||| |||||||||||| || |  |||||||||| |||| || |||| ||    
T  9632434 tttttcaaatgattaatatttgcaatgacaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctat 9632335  T
Q  830 ttaa 833  Q
    ||||    
T  9632334 ttaa 9632331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 826
Target Start/End: Complemental strand, 38619897 - 38619808
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 826  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||| |||||||||||| || || |||||||||||| ||||| ||||    
T  38619897 aatgattaaattttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaagacc 38619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 837
Target Start/End: Original strand, 27857027 - 27857127
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||  |||||||||||||| |||||||||||| ||    |||||||||||||||||| |||  |||||||||    
T  27857027 aatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaaacc 27857126  T
Q  837 t 837  Q
    |    
T  27857127 t 27857127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 36623451 - 36623367
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||  | ||||||| ||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  36623451 aatgattaatatttgcaggagcagattgaaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 36623367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 41801915 - 41801831
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| ||||||||||||||  ||||||||||| || |  ||||||||||||||||||    
T  41801915 aatgattaatatttgcaggggcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaa 41801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 726 - 837
Target Start/End: Complemental strand, 13566520 - 13566409
Alignment:
Q  726 accatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgac 825  Q
    |||||||||| ||||||||||||||||| |  || | |||||| || | ||||||||||||| |||||||| ||    | |||||||||||||||| |||    
T  13566520 accatttttcaaatgattaatatttgcaatggcaaaatggaaggatcaataacttcagagacaaaaattcaaatgtactgtatttgcagggacgaaagac 13566421  T
Q  826 ccatttaaacct 837  Q
    | ||||||||||    
T  13566420 ctatttaaacct 13566409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 725 - 783
Target Start/End: Complemental strand, 24529789 - 24529731
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcag 783  Q
    ||||||||||| |||||||||||||||||||  || |||||||| ||||||||||||||    
T  24529789 gaccatttttcaaatgattaatatttgcactggcacattggaaggattagtaacttcag 24529731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 7678 - 7779
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||||||| |||||||||||||  |||||||||||| ||    |||||||||||||||||| |||| |||||| ||    
T  7678 aatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 7777  T
Q  837 tt 838  Q
    ||    
T  7778 tt 7779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 11478244 - 11478143
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||  ||| |||||| ||    
T  11478244 aatgattaatatttgcaggggcagattgaaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 11478145  T
Q  837 tt 838  Q
    ||    
T  11478144 tt 11478143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 724 - 821
Target Start/End: Complemental strand, 22763707 - 22763610
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||| ||||||||||||||| | |   ||||| |||  |||||||||||||| |||||||||||| || |  |||||||||| |||||||    
T  22763707 ggaccatttttcaaatgattaatatttgtagtggtagattagaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacgaa 22763610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 724 - 833
Target Start/End: Complemental strand, 31690007 - 31689898
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||| ||||||| ||||||||| ||||||| |  || |||||||| ||| |||||||||  |||||||||||| ||  | ||||||||||||||| || |    
T  31690007 ggacaatttttcaaatgattaacatttgcagtggcatattggaaggattggtaacttcatggacgaaaattcaaatggtctatatttgcagggacaaaag 31689908  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  31689907 acctatttaa 31689898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 36623638 - 36623739
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| ||    |||||||||||||||||| |||  |||||| ||    
T  36623638 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 36623737  T
Q  837 tt 838  Q
    ||    
T  36623738 tt 36623739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 41182181 - 41182282
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||  |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  41182181 aatgattaatatttgcaggggcagattgaaatgattagtaacttcagggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 41182280  T
Q  837 tt 838  Q
    ||    
T  41182281 tt 41182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 7492 - 7408
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| |   |||  |||||||||||||||||||||| || ||||||||| || |  ||||||||||||||||||    
T  7492 aatgattaatatttgtagggacatgttggaagaattagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaa 7408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 833
Target Start/End: Original strand, 15716149 - 15716257
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||| | |  || | | |||| |||||||||||||| |||||||||| | || |  |||||||||| ||||||| ||    
T  15716149 gaccatttttcaaatgattaatatttgtaatggcaaaatagaaggattagtaacttcagggacgaaaatttaaatgacatatatttgcatggacgaaaga 15716248  T
Q  825 cccatttaa 833  Q
    || ||||||    
T  15716249 cctatttaa 15716257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 31690181 - 31690264
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| |||||||||||| || |  ||||||| ||||||||||    
T  31690181 aatgattaatatttgcagtggcagattggaatgattagtaacttcagggacgaaaattca-atgacctatatttacagggacgaa 31690264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 37343067 - 37343151
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| || |  ||||||||||||| ||||    
T  37343067 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctatatttgcaggggcgaa 37343151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 43866810 - 43866726
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    || ||||||||||||||||| ||||| |||||||||||| ||    ||||||||||||||||||    
T  43866810 aatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaa 43866726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 43866996 - 43867080
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||  |||||||||||| ||  | ||||||||||||||||||    
T  43866996 aatgattaatatttgcaggggcagattgaaaggattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaa 43867080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 758 - 821
Target Start/End: Original strand, 20096330 - 20096393
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||| |||||||||||||| |||||||||||| ||    ||||||||||||||||||    
T  20096330 cagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaa 20096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 23424637 - 23424700
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || || |||||||||||||| ||| |||| ||||||    
T  23424637 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaa 23424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 742 - 833
Target Start/End: Original strand, 24529946 - 24530037
Alignment:
Q  742 ttaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||| |  ||||| ||||| ||||||||||||||  ||||||||||| || |  |||||||||||| ||||| |||| ||||||    
T  24529946 ttaatatttgcagtggcagataggaaggattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaa 24530037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 796
Target Start/End: Complemental strand, 25287891 - 25287832
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||    
T  25287891 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattca 25287832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 595
Target Start/End: Complemental strand, 10658978 - 10658884
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacga-tgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccc-tagtctttgtatc 595  Q
    ||||||||| |||||||||| | ||||||||||||| |||||||  ||||| ||| |||||| ||||||||| || ||||| |||||||||||||    
T  10658978 gattagagttgatccacttgaattgatttatcacgattgtatttctgtttgggttattcctaagtcaggtctaatttccccatagtctttgtatc 10658884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 737 - 819
Target Start/End: Original strand, 40525792 - 40525874
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacg 819  Q
    |||||||||||||||||    ||||||||||  |||||||| ||||| |||||||||||| ||||  ||||||| ||||||||    
T  40525792 aatgattaatatttgcaggggcagattggaatgattagtaatttcagggacgaaaattcaaataacctatatttacagggacg 40525874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 761 - 838
Target Start/End: Original strand, 9632612 - 9632689
Alignment:
Q  761 attggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    |||||||| |||||||||||||  |||||||||||| || |  ||||||||||||||| || |||| |||||| ||||    
T  9632612 attggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcctt 9632689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 835
Target Start/End: Complemental strand, 15716135 - 15716070
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaac 835  Q
    ||||||||||||||||||||||||||| || |  ||||||||||||||  || |||| ||||||||    
T  15716135 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggataaaagacctatttaaac 15716070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 35163596 - 35163495
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||  |||||| |  ||||||| ||| || ||||||||||  |||||||||||| ||   ||||||||||||||| ||| |||| |||||||||    
T  35163596 aatgattaaattttgcagtggcagattgaaaggatcagtaacttcaaggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaaacc 35163497  T
Q  837 tt 838  Q
    ||    
T  35163496 tt 35163495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 772 - 833
Target Start/End: Original strand, 41182023 - 41182084
Alignment:
Q  772 tagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||| |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  41182023 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 41182084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 547529 - 547445
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||| |||||| | ||    ||||||||||||||||||    
T  547529 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatggcctatatttgcagggacgaa 547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 23424611 - 23424515
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    |||||||  ||||||||||||||||| ||| |||||||| || |  ||||||| |||||| ||| |||| ||||||    
T  23424611 aatgattaatatttgcaggggcagattgttagaattagtaacttcagggacaaaaattcaaatgacctatatttacagggatgaaagacctatttaa 23424515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 23424797 - 23424881
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||  |||||||||||||| |||||||||||| ||    |||||||||||| |||||    
T  23424797 aatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaa 23424881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 11478270 - 11478333
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  11478270 attagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 11478333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 737 - 796
Target Start/End: Original strand, 11478430 - 11478489
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||| ||||    
T  11478430 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaagttca 11478489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 22763720 - 22763783
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| |||    ||||||||||||||||| |||| ||||||    
T  22763720 attagtaacttcagggacgaaaattcaaatagcagatatttgcagggacgaaagacctatttaa 22763783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 578
Target Start/End: Complemental strand, 25140461 - 25140386
Alignment:
Q  505 attagagtagatccacttgtactgatttatcacga-tgtattttcgtttgagtt-ttcctaggtcaggtcttatgt 578  Q
    |||||||| |||||||||| | ||||||||||||| ||||||| |||||||||| |||||  ||||||||| ||||    
T  25140461 attagagttgatccacttggattgatttatcacgattgtatttccgtttgagttattcctgagtcaggtctcatgt 25140386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 25287917 - 25287980
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  25287917 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 25287980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 821
Target Start/End: Original strand, 26740024 - 26740087
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||| ||| |||||||||||||  |||||||||||| || |  ||||||||||||||||||    
T  26740024 cagattgcaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaa 26740087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 834
Target Start/End: Complemental strand, 40933234 - 40933179
Alignment:
Q  779 ttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaa 834  Q
    |||||||||||||||||| |||| |||||||||||| ||| || |||| |||||||    
T  40933234 ttcagagacgaaaattcaaataacttatatttgcagagacaaaagacctatttaaa 40933179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 2e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 724 - 833
Target Start/End: Original strand, 7015781 - 7015890
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||| ||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||||| |  | ||||||||||| ||||||| |    
T  7015781 ggactatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaag 7015880  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  7015881 acctatttaa 7015890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 33735598 - 33735699
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||| |||||| ||    
T  33735598 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 33735697  T
Q  837 tt 838  Q
    ||    
T  33735698 tt 33735699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 724 - 808
Target Start/End: Original strand, 27753751 - 27753835
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatat 808  Q
    |||| ||||||| ||||||||||||||||| |  ||||||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  27753751 ggactatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagaaacgaaaattcaaataacttatat 27753835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 838
Target Start/End: Original strand, 22024142 - 22024256
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  || |||||||| ||||||||||| || |||||||||||| || |  ||||||||||| |||||| |    
T  22024142 ggaccatttttcaaatgattaatatttgcagtggcaaattggaaggattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaag 22024241  T
Q  824 acccatttaaacctt 838  Q
    ||  |||||| ||||    
T  22024242 acgtatttaagcctt 22024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 728 - 821
Target Start/End: Complemental strand, 21260973 - 21260880
Alignment:
Q  728 catttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| ||||||||||||||||| |  || | |||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  21260973 catttttcaaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 21260880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 32052509 - 32052610
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  32052509 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 32052608  T
Q  837 tt 838  Q
    ||    
T  32052609 tt 32052610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 12991073 - 12991157
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||     |||||||||| ||||||||||||||||||||||||||| || |  ||||||||||||||||||    
T  12991073 aatgattaatatttgcaggggtagattggaaggattagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaa 12991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 13064694 - 13064778
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| ||||||||||| ||||||||||||||| || |  ||||||||||||||||||    
T  13064694 aatgattaatatttgcaggggcagattggaaggattagtaactttagagacgaaaattcaaatgacatatatttgcagggacgaa 13064778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 14745547 - 14745451
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| || |  |||||||||||||||||| |||| ||||||    
T  14745547 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 14745451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 725 - 833
Target Start/End: Complemental strand, 34404594 - 34404487
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||||| |  || || ||||| |||||||||||||| |||||||||||| || |  |||||||||||| ||||| ||    
T  34404594 gaccatttttcaaatgattaatatttgcaatgccaaat-ggaaggattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaaga 34404496  T
Q  825 cccatttaa 833  Q
    || ||||||    
T  34404495 cctatttaa 34404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 6421907 - 6422008
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||| ||| |||||||| ||||| |||||||||||| || | |||||||||||||| |||| |||| |||||||||    
T  6421907 aatgattaatatttgcaggggcatattgaaaggattagtaatttcagggacgaaaattcaaatgacttatatttgcaggggcgaaagacctatttaaacc 6422006  T
Q  837 tt 838  Q
    ||    
T  6422007 tt 6422008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 25253371 - 25253455
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| ||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  25253371 aatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 25253455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 25317162 - 25317246
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||| ||||||||    ||||||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||||||    
T  25317162 aatgattagtatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaa 25317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 724 - 838
Target Start/End: Original strand, 22533662 - 22533776
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  ||   | |||| |||||||||||| | |||||||||||| || |  ||||||||||||||||||      
T  22533662 ggaccatttttcaaatgattaatatttgcaatggcaacattgaaggattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaaa 22533761  T
Q  824 acccatttaaacctt 838  Q
    | | |||||||||||    
T  22533762 agctatttaaacctt 22533776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 826
Target Start/End: Complemental strand, 27753577 - 27753489
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacc 826  Q
    ||||||||||||||||| |  ||| ||||||| |||||||||||||  |||||||||||| || |  |||||||||||||||||| ||||    
T  27753577 aatgattaatatttgcagtggcagtttggaaggattagtaacttcatggacgaaaattca-atgacctatatttgcagggacgaaagacc 27753489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 37945279 - 37945379
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||| |||||||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  37945279 aatgattaatatttgcaagggcagattgaaaggattagtaacttcagggacgaaaattca-atgacctatatttgcagggacgaaagacatatttaagcc 37945377  T
Q  837 tt 838  Q
    ||    
T  37945378 tt 37945379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 7015607 - 7015511
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||  || ||||||||| ||    |||||||||||||||||| |||| ||||||    
T  7015607 aatgattaatatttgcagtggcagattggaatgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaa 7015511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 8323341 - 8323437
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| |  || | || |||||||||||||||||  |||||||||||| |||   ||||||||||||| |||| |||| ||||||    
T  8323341 aatgattaatatttgcaatggcaaaatgaaagaattagtaacttcaaggacgaaaattcaaatagcatatatttgcaggggcgaaagacctatttaa 8323437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 14745598 - 14745682
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||    |||||||| |||||||||    
T  14745598 aatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacgaa 14745682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 817
Target Start/End: Complemental strand, 18934824 - 18934732
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    ||||||||||| ||||| ||||||||||| |  || | || ||| |||||||||||||  |||||||||||| || | |||||||||||||||    
T  18934824 gaccatttttcaaatgactaatatttgcaatggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcaggga 18934732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 817
Target Start/End: Complemental strand, 25253185 - 25253105
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||    
T  25253185 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25253105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 817
Target Start/End: Complemental strand, 25316975 - 25316895
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || |  ||||||||||||||    
T  25316975 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcaggga 25316895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 32052323 - 32052239
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    | ||||||||| |||||||||||||| |||||||||||| || |  ||||||| ||||||||||    
T  32052323 aatgattaatatttgcaggggcggattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaa 32052239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 37945093 - 37944997
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || |  ||||||| || ||||||| |||| ||||||    
T  37945093 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaa 37944997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 16118210 - 16118147
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||| ||||||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  16118210 attagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 16118147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 772 - 821
Target Start/End: Complemental strand, 41339611 - 41339562
Alignment:
Q  772 tagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||| |||||||||||| || || ||||||||||||||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaa 41339562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 770 - 838
Target Start/End: Complemental strand, 16118027 - 16117959
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    |||||||||||||| |||||||||||| || |  ||||||| ||||||| || |||| |||||||||||    
T  16118027 attagtaacttcagggacgaaaattcaaatgacctatatttacagggacaaaagacctatttaaacctt 16117959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 33735412 - 33735328
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||   |||||||||||| |||||||| ||||| |||||||| ||| ||    |||||||| |||||||||    
T  33735412 aatgattaatatttgcagggacagattggaaggattagtaatttcagggacgaaaaatcaaatggcctatatttgtagggacgaa 33735328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Original strand, 12628340 - 12628391
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||| |||||||||||| || | ||||||||||| |||||||    
T  12628340 attagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaa 12628391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 22533649 - 22533586
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  || ||||||||||||||| |||| ||||||    
T  22533649 attagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaa 22533586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 33735572 - 33735509
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  33735572 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 33735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 770 - 832
Target Start/End: Complemental strand, 6421881 - 6421819
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattta 832  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| |||||    
T  6421881 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 6e-21; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 725 - 837
Target Start/End: Complemental strand, 20947304 - 20947192
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||| | |  ||||||||||| |||||||||||||  |||||||||||| || |  |||||||| ||||||||| ||    
T  20947304 gaccatttttcaaatgattaatatttgtagtggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaaga 20947205  T
Q  825 cccatttaaacct 837  Q
    || ||||||||||    
T  20947204 cctatttaaacct 20947192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 724 - 833
Target Start/End: Original strand, 5280543 - 5280652
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| | |||||||  ||| |||||||||||||| |||||||||||| || |  |||||||||| |||| || |    
T  5280543 ggaccatttttcaaatgattaatatttgcaatgacagattcaaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaag 5280642  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  5280643 acctatttaa 5280652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 758 - 838
Target Start/End: Original strand, 5636331 - 5636411
Alignment:
Q  758 cagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    ||||||||||| |||||||||||||| |||||||||||| || | ||||||||||| ||||||| |||| |||||||||||    
T  5636331 cagattggaaggattagtaacttcagggacgaaaattcaaattacttatatttgcaaggacgaaagacctatttaaacctt 5636411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 34454765 - 34454866
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| |||||||||||||||||| |||||||||||| || || |||||||||||||| ||| | || |||||| ||    
T  34454765 aatgattaatatttgcaggggcagattgaaagaattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagtcctatttaagcc 34454864  T
Q  837 tt 838  Q
    ||    
T  34454865 tt 34454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 724 - 822
Target Start/End: Complemental strand, 5636137 - 5636040
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaat 822  Q
    |||||||||||| ||||||||||||||||| |  || || ||||| ||||||||||| || |||||||||||| || |  |||||||||||||||||||    
T  5636137 ggaccatttttcaaatgattaatatttgcaatggcaaat-ggaaggattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaat 5636040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 725 - 826
Target Start/End: Complemental strand, 27557959 - 27557858
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||||| |  || | ||||||||||| ||||||||  |||||||||||| || |  ||||||| |||||||||| ||    
T  27557959 gaccatttttcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaaga 27557860  T
Q  825 cc 826  Q
    ||    
T  27557859 cc 27557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 34454583 - 34454482
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||     |||||||||| ||||||||||||| ||||||||||||| || |  |||||||||||||||||| |||  |||||| ||    
T  34454583 aatgattaatatttgcaggggtagattggaaggattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaagcc 34454484  T
Q  837 tt 838  Q
    ||    
T  34454483 tt 34454482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 47081946 - 47081845
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||| || |  ||||||| ||| ||||||||||||||||| ||||||||| || |  |||||||| ||||||||| |||| |||||| ||    
T  47081946 aatgattaatatttacaatggcagattgaaaggattagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaagcc 47081847  T
Q  837 tt 838  Q
    ||    
T  47081846 tt 47081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 12931023 - 12931107
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| || |   |||||||||||||||||    
T  12931023 aatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaa 12931107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 43938179 - 43938263
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| |||||||||||| ||   ||||||||||| |||||||    
T  43938179 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaa 43938263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 724 - 836
Target Start/End: Original strand, 44545867 - 44545979
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||  ||||||||||||||||| |   | | | |||| |||||||||||||| |||||||||||| || | || |||||||| ||||||| |    
T  44545867 ggaccatttttaaaatgattaatatttgcaatggtaaaattgaaggattagtaacttcagggacgaaaattcaaatgacttgtatttgcatggacgaaag 44545966  T
Q  824 acccatttaaacc 836  Q
    ||| |||||||||    
T  44545967 acctatttaaacc 44545979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 759 - 833
Target Start/End: Original strand, 47121585 - 47121659
Alignment:
Q  759 agattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||| ||| ||||||||||||||||||||||||||| ||  |  ||||||||||||||||| |||| ||||||    
T  47121585 agattgaaagtattagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaa 47121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 821
Target Start/End: Original strand, 12929539 - 12929623
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||||||   ||||||||||| |||||| ||||||| |||| ||||||| || |   |||||||||||||||||    
T  12929539 aatgattaatatttgcacgggcagattggaaggattagtcacttcagggacggaaattcaaatgaccaatatttgcagggacgaa 12929623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 813
Target Start/End: Original strand, 20947479 - 20947555
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgca 813  Q
    |||||||||||||| || |   |||||||||| ||||||||||||| ||| ||||||||| |||| |||||||||||    
T  20947479 aatgattaatatttacagtggtagattggaaggattagtaacttcatagatgaaaattcaaataacttatatttgca 20947555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 817
Target Start/End: Original strand, 23191139 - 23191218
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcaggga 817  Q
    ||||||||||||||||| |  |||||||||||||||||||| ||||  ||||| |||||| ||||  ||||||||||||||    
T  23191139 aatgattaatatttgcagtggcagattggaagaattagtaaattca-tgacgataattcaaataacatatatttgcaggga 23191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 27558137 - 27558233
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| |  || | |||||| ||||||||||||   |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  27558137 aatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 27558233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 835
Target Start/End: Complemental strand, 35262725 - 35262627
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagat-aatttatatttgcagggacgaatgacccatttaaac 835  Q
    |||||||||  |||||| |  ||||||||||| |||||||||||||||||| |||||||| || | | ||| |||||||||||||| |||| ||||||||    
T  35262725 aatgattaaattttgcagtggcagattggaaggattagtaacttcagagacaaaaattcaaatgactatat-tttgcagggacgaaagacctatttaaac 35262627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 595
Target Start/End: Complemental strand, 20118045 - 20117951
Alignment:
Q  504 gattagagtagatccacttgtactgatttatcacga-tgtattttcgtttgagtt-ttcctaggtcaggtcttatgtcccct-agtctttgtatc 595  Q
    ||||||||| |||||||||| | ||||||||||||| ||||||| | |||| ||| |||||| |||||||||||| |||||| | ||||||||||    
T  20118045 gattagagttgatccacttggattgatttatcacgattgtatttccatttgggttattcctaagtcaggtcttatatcccctcaatctttgtatc 20117951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 26825729 - 26825628
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||| ||||||    ||||||||||  |||||||||||||| |||||||||||| || |  ||||||| |||||||||| |||  |||||| ||    
T  26825729 aatgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 26825630  T
Q  837 tt 838  Q
    ||    
T  26825629 tt 26825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 838
Target Start/End: Original strand, 26825915 - 26826016
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    ||||||| ||| |||| ||||||||  |||||||||||| || |  |||||||||||| ||||| |||| |||||| ||    
T  26825915 aatgattaatatttgcaggggcagattgaaaggattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagacctatttaagcc 26826014  T
Q  837 tt 838  Q
    ||    
T  26826015 tt 26826016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 741 - 821
Target Start/End: Complemental strand, 5280367 - 5280287
Alignment:
Q  741 attaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||| || |  ||||||||||| ||||||||||||||  ||||||||||| ||    ||||||||||||||||||    
T  5280367 attaatatttacagtggcagattggaaggattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacgaa 5280287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 769 - 821
Target Start/End: Original strand, 5636149 - 5636201
Alignment:
Q  769 aattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    ||||||||||||||| |||||||||||| || | ||||||||| |||||||||    
T  5636149 aattagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaa 5636201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 770 - 838
Target Start/End: Original strand, 7159246 - 7159314
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacctt 838  Q
    ||||||||||||||  ||||||||||| || || |||||||||||||| |||||||  |||||| ||||    
T  7159246 attagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaatgacatatttaagcctt 7159314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 843
Target Start/End: Original strand, 15827993 - 15828113
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagag-acgaaaattcagataatttatatttgcagggacgaat 822  Q
    |||||||||||| ||||||||||||||||| |  || ||||||| ||||| ||| ||||| |   ||||||||| || | |||||||||||| ||||||     
T  15827993 ggaccatttttcaaatgattaatatttgcagtggcaaattggaataattattaatttcagggttagaaaattcaaatgacttatatttgcagagacgaaa 15828092  T
Q  823 gacccatttaaaccttgattt 843  Q
    |  | ||||||||||| ||||    
T  15828093 gttctatttaaaccttaattt 15828113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 821
Target Start/End: Complemental strand, 43937993 - 43937909
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| || ||||||||| || |  ||||||| || |||||||    
T  43937993 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaa 43937909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Original strand, 27557973 - 27558036
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  27557973 attagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 27558036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 34454739 - 34454676
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  34454739 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 34454676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 839
Target Start/End: Original strand, 37563642 - 37563741
Alignment:
Q  740 gattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaaccttg 839  Q
    ||||||||||||||    || |||||||| |||||||||||||| |||||||||||| ||    ||||||| |||||||||| |||  |||||| |||||    
T  37563642 gattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagccttg 37563741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 770 - 836
Target Start/End: Complemental strand, 47082106 - 47082040
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||| ||||||||| |||||||||||| || |  |||||||||||||||||| |||  |||||||||    
T  47082106 attaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatttaaacc 47082040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 770 - 843
Target Start/End: Original strand, 19980211 - 19980284
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaaccttgattt 843  Q
    |||||||||||||  ||| |||||||| || | |||||||||||| || ||| |||| ||||||||||| ||||    
T  19980211 attagtaacttcaaggacaaaaattcaaatgacttatatttgcagtgatgaaagacctatttaaacctttattt 19980284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 818
Target Start/End: Complemental strand, 37563453 - 37563372
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggac 818  Q
    |||||||||||||||||    |||||| |||| |||||||| ||||| |||||||||||| ||    |||||||||||||||    
T  37563453 aatgattaatatttgcaggggcagattagaaggattagtaaattcagggacgaaaattcaaatggcctatatttgcagggac 37563372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 724 - 833
Target Start/End: Complemental strand, 8545 - 8436
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||||| || |  |||||||  || |||||| |    
T  8545 ggaccatttttcaaatgattaatatttgcagtggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaag 8446  T
Q  824 acccatttaa 833  Q
    ||| ||||||    
T  8445 acctatttaa 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 838
Target Start/End: Complemental strand, 10424 - 10323
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaaacc 836  Q
    |||||||||||||||||    || |||||||| |||||||||||||| |||||||||||| || || |||||||||||||||||| |||| |||||| ||    
T  10424 aatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagcc 10325  T
Q  837 tt 838  Q
    ||    
T  10324 tt 10323  T

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Target: scaffold0202 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 724 - 836
Target Start/End: Complemental strand, 14347 - 14235
Alignment:
Q  724 ggaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatg 823  Q
    |||| ||||||| ||| ||||||||||||| |  || |||||||| ||||||||| |||  |||||||||||| || | ||||||||||||||||||| |    
T  14347 ggacgatttttcaaattattaatatttgcagtggcaaattggaaggattagtaacctcaaggacgaaaattcaaatgacttatatttgcagggacgaaag 14248  T
Q  824 acccatttaaacc 836  Q
    ||| |||||||||    
T  14247 acctatttaaacc 14235  T

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Target: scaffold0202; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 737 - 833
Target Start/End: Original strand, 14519 - 14615
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| || |  |||||| |||| |||||||||||||  |||||||||||| || |  ||||||| |||||| ||| |||| ||||||    
T  14519 aatgattaatatttacagtggcagatttgaaggattagtaacttcaaggacgaaaattcaaatgacctatatttacagggaggaaggacctatttaa 14615  T

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Target: scaffold0279 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 725 - 826
Target Start/End: Original strand, 11130 - 11231
Alignment:
Q  725 gaccatttttctaatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatga 824  Q
    ||||||||||| ||||||||||||||||| |  || | ||||||||||| ||||||||  |||||||||||| || |  ||||||| |||||||||| ||    
T  11130 gaccatttttcaaatgattaatatttgcaatggcaaaatggaagaattattaacttcaaggacgaaaattcaaatgacctatatttacagggacgaaaga 11229  T
Q  825 cc 826  Q
    ||    
T  11230 cc 11231  T

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Target: scaffold0279; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 737 - 833
Target Start/End: Complemental strand, 10952 - 10856
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    ||||||||||||||||| |  || | |||||| ||||||||||||   |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  10952 aatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 10856  T

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Target: scaffold0279; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 11116 - 11053
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||  |||||||||||| || |  |||||||||||||||||| |||| ||||||    
T  11116 attagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 11053  T

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Target: scaffold1493 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 737 - 796
Target Start/End: Original strand, 878 - 937
Alignment:
Q  737 aatgattaatatttgcactaacagattggaagaattagtaacttcagagacgaaaattca 796  Q
    |||||||||||||||||    ||||||||||| |||||||||||||| ||||||||||||    
T  878 aatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattca 937  T

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Target: scaffold1493; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 833
Target Start/End: Complemental strand, 852 - 789
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccatttaa 833  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| ||||||    
T  852 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 789  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 770 - 821
Target Start/End: Original strand, 120324 - 120375
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaa 821  Q
    |||||||||||||  |||||||||||| ||||  ||||||||||||||||||    
T  120324 attagtaacttcatggacgaaaattcaaataacatatatttgcagggacgaa 120375  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 770 - 832
Target Start/End: Original strand, 10787 - 10849
Alignment:
Q  770 attagtaacttcagagacgaaaattcagataatttatatttgcagggacgaatgacccattta 832  Q
    |||||||||||||| |||||||||||| || |  |||||||||||||| ||| |||| |||||    
T  10787 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 10849  T

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