View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6682_2D_low_86 (Length: 247)
Name: NF6682_2D_low_86
Description: NF6682_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6682_2D_low_86 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 50266364 - 50266598
Alignment:
| Q |
1 |
cattcattttctcgtagactgtttgtcatctaatcgtatttgtttttgtctttttattctctattccttaatttccataatgcagcttacctgctgataa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |
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| T |
50266364 |
cattcattttctcgtagactgtttgtcatctaatcgtatttgtttttgtctttttattctgtatttcttaatttccataatgcagcttacctgctgataa |
50266463 |
T |
|
| Q |
101 |
tagaaagtagtccattagaattttaaaccagagcattttgtgattcgtagcttgttttggacagtattatagattttttattagttatttttcatctaag |
200 |
Q |
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||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50266464 |
tagaaagtagtccgttagaattttgaaccagagcattttgtgattcgtagcttgttttggacagtattatagattttttattagttatttttcatctaag |
50266563 |
T |
|
| Q |
201 |
taataggttttttctataaacagttagatgatgtc |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
50266564 |
taataggttttttctataaacagttagatgatgtc |
50266598 |
T |
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