View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6685_low_4 (Length: 257)
Name: NF6685_low_4
Description: NF6685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6685_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 2876048 - 2876291
Alignment:
| Q |
1 |
ccaacatatattggtgtaatgatgaaattgatgtatgtccatagttgctaagtgcaccatatgaagcgaatcaaaatagcaacgacgctgtgaaatccaa |
100 |
Q |
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| T |
2876048 |
ccaacatatattagtgtaatgatgaaatcgatgtatatccatagttgctaagtgcaccacatgaagcggatcaaaatagcaacgacgctctgaaatccaa |
2876147 |
T |
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| Q |
101 |
cttgccaacacaaccattgatttaatgttgtttcatatttatttgatgttattttcaatcattaatttcaccaaacactttgataactttataagctaat |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2876148 |
cttaccaacacaaccattgatttaatgttgtttcatatttatttgatgttattttcaatcattaatttcaccaaacactttgataactttataagctaat |
2876247 |
T |
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| Q |
201 |
ttttactgaactagaaatatgttgatattatgctatagttatat |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2876248 |
ttttactgaactagaaatatgttgatattatgctatagttatat |
2876291 |
T |
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