View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6689_2D_low_7 (Length: 267)
Name: NF6689_2D_low_7
Description: NF6689_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6689_2D_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 18691450 - 18691701
Alignment:
| Q |
18 |
agtctgcatgcaatgcattcacattttcttgatctagtattctt--gtgttgtattatctctaatccttattataagaaaatctttgaagattattttgg |
115 |
Q |
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| T |
18691450 |
agtctgcatgcaatgcattcacattttcttgatctagtattcttttgtgttgtattatctctaatccttattataagaaaatctttgaagattattttgg |
18691549 |
T |
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| Q |
116 |
ccctattcattagaaaatctctaatcacaatttttatggtctatttagttcttaatagacttttctactcctcatttattatgtcactccgtattttgtt |
215 |
Q |
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| T |
18691550 |
ccctattcattagaaaatctctaatcacaatttttatggtctatttagttcttaatagacttttctactcctcatttattatgtcactccgtattttgtt |
18691649 |
T |
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| Q |
216 |
ccaaagtcaattctatacacatcaattctaacccttataaaatggaaccaaa |
267 |
Q |
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| T |
18691650 |
ccaaagtcaattctatacacatcaattctaacccttataaaatggaaccaaa |
18691701 |
T |
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