View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6690_low_10 (Length: 371)

Name: NF6690_low_10
Description: NF6690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6690_low_10
NF6690_low_10
[»] chr5 (45 HSPs)
chr5 (1-165)||(8032258-8032423)
chr5 (282-352)||(8032048-8032118)
chr5 (282-327)||(32842231-32842276)
chr5 (58-158)||(14111891-14111993)
chr5 (232-273)||(8032150-8032191)
chr5 (96-152)||(32842036-32842093)
chr5 (98-154)||(38692849-38692905)
chr5 (108-155)||(38640719-38640766)
chr5 (105-158)||(15799219-15799273)
chr5 (98-158)||(20891607-20891668)
chr5 (58-94)||(31929119-31929155)
chr5 (58-94)||(32841966-32842002)
chr5 (96-151)||(1350375-1350430)
chr5 (97-151)||(26095092-26095147)
chr5 (108-158)||(26319111-26319162)
chr5 (96-158)||(27212702-27212765)
chr5 (98-155)||(4064786-4064844)
chr5 (105-158)||(28083451-28083505)
chr5 (282-324)||(32841415-32841457)
chr5 (98-158)||(6156725-6156786)
chr5 (98-158)||(31221405-31221466)
chr5 (98-158)||(38871665-38871726)
chr5 (58-94)||(4064715-4064751)
chr5 (96-159)||(13908540-13908604)
chr5 (58-94)||(15799315-15799351)
chr5 (58-94)||(20891703-20891739)
chr5 (58-94)||(25747115-25747151)
chr5 (58-94)||(29862702-29862738)
chr5 (58-94)||(31221334-31221370)
chr5 (58-94)||(38871761-38871797)
chr5 (58-93)||(6156822-6156857)
chr5 (58-93)||(13908639-13908674)
chr5 (108-158)||(24203760-24203811)
chr5 (58-92)||(16429164-16429198)
chr5 (108-158)||(37094992-37095042)
chr5 (98-158)||(15957743-15957804)
chr5 (60-93)||(26095183-26095216)
chr5 (98-154)||(29862610-29862667)
chr5 (98-158)||(38372303-38372364)
chr5 (98-158)||(39524770-39524831)
chr5 (58-94)||(28083373-28083409)
chr5 (58-94)||(33487700-33487736)
chr5 (58-94)||(37183776-37183812)
chr5 (58-94)||(38372399-38372435)
chr5 (58-94)||(38692778-38692814)
[»] chr6 (19 HSPs)
chr6 (98-158)||(7412860-7412920)
chr6 (96-158)||(24604426-24604489)
chr6 (98-158)||(2813290-2813351)
chr6 (98-158)||(17264442-17264503)
chr6 (103-158)||(5699590-5699646)
chr6 (97-159)||(9905149-9905212)
chr6 (98-158)||(32035145-32035206)
chr6 (58-94)||(1945525-1945561)
chr6 (98-150)||(1945596-1945648)
chr6 (232-284)||(9905025-9905077)
chr6 (58-94)||(9905242-9905278)
chr6 (58-94)||(14587555-14587591)
chr6 (58-94)||(23406924-23406960)
chr6 (98-158)||(5638894-5638955)
chr6 (58-94)||(2539579-2539615)
chr6 (58-94)||(3717278-3717314)
chr6 (58-94)||(4508297-4508333)
chr6 (58-94)||(5699693-5699729)
chr6 (96-154)||(29289690-29289750)
[»] chr1 (37 HSPs)
chr1 (96-159)||(28866695-28866759)
chr1 (96-159)||(34006290-34006354)
chr1 (96-158)||(6223801-6223864)
chr1 (98-158)||(32817677-32817738)
chr1 (58-94)||(15069836-15069872)
chr1 (58-94)||(24472822-24472858)
chr1 (285-324)||(34006116-34006155)
chr1 (108-158)||(49786301-49786351)
chr1 (108-158)||(24471390-24471442)
chr1 (284-325)||(34006943-34006984)
chr1 (103-155)||(34162792-34162845)
chr1 (98-158)||(49677515-49677576)
chr1 (58-94)||(6223741-6223777)
chr1 (58-90)||(8364140-8364172)
chr1 (58-94)||(17000506-17000542)
chr1 (96-159)||(26723553-26723612)
chr1 (58-94)||(28866625-28866661)
chr1 (58-94)||(34006388-34006424)
chr1 (108-159)||(40908010-40908062)
chr1 (58-94)||(41584660-41584696)
chr1 (58-94)||(42546095-42546131)
chr1 (58-94)||(45046845-45046881)
chr1 (108-158)||(30829542-30829593)
chr1 (108-158)||(43319272-43319323)
chr1 (96-151)||(3561400-3561457)
chr1 (104-158)||(15069913-15069969)
chr1 (58-87)||(32817606-32817635)
chr1 (98-158)||(33611476-33611537)
chr1 (98-158)||(40650741-40650802)
chr1 (98-158)||(42545999-42546060)
chr1 (58-87)||(52744838-52744867)
chr1 (58-94)||(27794959-27794995)
chr1 (58-94)||(34162717-34162753)
chr1 (58-94)||(40907929-40907965)
chr1 (103-158)||(41584741-41584797)
chr1 (58-94)||(44573092-44573128)
chr1 (58-94)||(45567885-45567921)
[»] chr7 (28 HSPs)
chr7 (96-158)||(6467729-6467792)
chr7 (282-327)||(7114754-7114799)
chr7 (98-158)||(3936140-3936201)
chr7 (98-158)||(8154931-8154992)
chr7 (102-158)||(31985588-31985645)
chr7 (284-324)||(24689777-24689817)
chr7 (96-154)||(6467205-6467264)
chr7 (96-154)||(24690398-24690457)
chr7 (98-158)||(24042254-24042315)
chr7 (98-154)||(28230534-28230591)
chr7 (98-158)||(47202526-47202587)
chr7 (58-94)||(9151924-9151960)
chr7 (58-94)||(28230463-28230499)
chr7 (58-94)||(36468532-36468568)
chr7 (58-94)||(42925636-42925672)
chr7 (58-93)||(5278393-5278428)
chr7 (237-284)||(7115477-7115524)
chr7 (104-158)||(19225670-19225725)
chr7 (98-158)||(31643073-31643134)
chr7 (98-158)||(37518361-37518422)
chr7 (98-158)||(42925707-42925768)
chr7 (58-94)||(3936236-3936272)
chr7 (58-94)||(19225593-19225629)
chr7 (58-94)||(24042183-24042219)
chr7 (96-151)||(30861142-30861198)
chr7 (58-94)||(36408499-36408535)
chr7 (58-94)||(42865097-42865133)
chr7 (58-94)||(43185910-43185946)
[»] chr4 (41 HSPs)
chr4 (58-158)||(25538974-25539075)
chr4 (96-158)||(3703314-3703377)
chr4 (97-159)||(8106431-8106494)
chr4 (98-158)||(2506097-2506158)
chr4 (98-158)||(19835560-19835621)
chr4 (98-158)||(25752510-25752571)
chr4 (98-158)||(46440340-46440401)
chr4 (58-94)||(2506026-2506062)
chr4 (58-94)||(8106529-8106565)
chr4 (237-284)||(8106306-8106353)
chr4 (96-142)||(41323157-41323203)
chr4 (284-325)||(8106242-8106283)
chr4 (98-158)||(25491461-25491522)
chr4 (98-158)||(40703704-40703765)
chr4 (58-94)||(19835656-19835692)
chr4 (58-94)||(25752439-25752475)
chr4 (58-90)||(27181515-27181547)
chr4 (58-94)||(31582417-31582453)
chr4 (98-158)||(32441851-32441911)
chr4 (122-158)||(38416605-38416641)
chr4 (58-94)||(40703800-40703836)
chr4 (58-94)||(52089321-52089357)
chr4 (58-94)||(53894020-53894056)
chr4 (58-94)||(55052614-55052650)
chr4 (282-325)||(8107064-8107107)
chr4 (108-158)||(23523946-23523997)
chr4 (56-94)||(14474204-14474242)
chr4 (58-92)||(25140917-25140951)
chr4 (98-155)||(55052685-55052743)
chr4 (98-158)||(17933203-17933264)
chr4 (98-158)||(29822659-29822720)
chr4 (98-158)||(31582488-31582549)
chr4 (58-94)||(38416963-38417000)
chr4 (98-158)||(38536210-38536271)
chr4 (98-158)||(41413166-41413227)
chr4 (58-94)||(7931793-7931829)
chr4 (58-94)||(17933132-17933168)
chr4 (58-94)||(25491390-25491426)
chr4 (58-94)||(38536306-38536342)
chr4 (58-94)||(41323087-41323123)
chr4 (58-94)||(48319059-48319095)
[»] chr3 (36 HSPs)
chr3 (97-158)||(30721870-30721933)
chr3 (96-158)||(51258434-51258497)
chr3 (98-158)||(47739998-47740059)
chr3 (96-151)||(5127964-5128019)
chr3 (108-158)||(47302051-47302102)
chr3 (98-158)||(49096293-49096354)
chr3 (98-158)||(50716284-50716345)
chr3 (98-158)||(50796502-50796563)
chr3 (58-94)||(3352061-3352097)
chr3 (96-151)||(29048381-29048437)
chr3 (58-94)||(35142202-35142238)
chr3 (58-94)||(38977743-38977779)
chr3 (58-94)||(49096222-49096258)
chr3 (58-94)||(51258531-51258567)
chr3 (100-154)||(51816280-51816335)
chr3 (58-92)||(33842069-33842103)
chr3 (56-94)||(47739925-47739963)
chr3 (98-158)||(3352132-3352193)
chr3 (98-158)||(3902872-3902933)
chr3 (98-158)||(34821409-34821470)
chr3 (98-158)||(35142106-35142167)
chr3 (98-158)||(43473035-43473096)
chr3 (98-158)||(51540680-51540741)
chr3 (58-94)||(501136-501172)
chr3 (65-93)||(5127901-5127929)
chr3 (58-94)||(28873133-28873169)
chr3 (58-94)||(29035842-29035878)
chr3 (58-94)||(33438649-33438685)
chr3 (58-94)||(34821338-34821374)
chr3 (98-149)||(39149850-39149902)
chr3 (58-94)||(39149937-39149973)
chr3 (58-94)||(47123154-47123190)
chr3 (58-94)||(47769390-47769426)
chr3 (58-94)||(50716380-50716416)
chr3 (58-94)||(50796431-50796467)
chr3 (58-94)||(51540609-51540645)
[»] chr2 (30 HSPs)
chr2 (98-158)||(25217852-25217912)
chr2 (96-159)||(41203246-41203310)
chr2 (96-155)||(38066733-38066792)
chr2 (98-158)||(4268299-4268360)
chr2 (104-156)||(15995180-15995233)
chr2 (98-158)||(45153852-45153913)
chr2 (58-94)||(17474789-17474825)
chr2 (58-94)||(41203176-41203212)
chr2 (96-158)||(34517133-34517195)
chr2 (98-158)||(33452504-33452565)
chr2 (98-158)||(41854960-41855021)
chr2 (98-158)||(42894409-42894470)
chr2 (58-94)||(5507547-5507583)
chr2 (58-94)||(32187859-32187895)
chr2 (282-326)||(38308278-38308322)
chr2 (58-94)||(39447290-39447326)
chr2 (58-93)||(15995103-15995138)
chr2 (96-154)||(30763679-30763737)
chr2 (98-158)||(17474860-17474921)
chr2 (98-158)||(32187930-32187991)
chr2 (98-158)||(36875017-36875078)
chr2 (121-154)||(38308879-38308912)
chr2 (98-158)||(39447194-39447255)
chr2 (58-87)||(45153781-45153810)
chr2 (97-125)||(19110075-19110103)
chr2 (58-94)||(25217765-25217801)
chr2 (122-158)||(33366959-33366995)
chr2 (58-94)||(33452433-33452469)
chr2 (232-284)||(38308980-38309032)
chr2 (58-94)||(44465717-44465753)
[»] scaffold0508 (1 HSPs)
scaffold0508 (98-158)||(3461-3522)
[»] scaffold0027 (2 HSPs)
scaffold0027 (98-158)||(142029-142090)
scaffold0027 (58-94)||(141958-141994)
[»] chr8 (33 HSPs)
chr8 (98-158)||(44106255-44106316)
chr8 (96-151)||(1076595-1076650)
chr8 (104-154)||(36980623-36980673)
chr8 (98-158)||(3094713-3094774)
chr8 (98-158)||(8885519-8885580)
chr8 (98-158)||(31519958-31520019)
chr8 (122-155)||(35676629-35676662)
chr8 (98-158)||(40994824-40994885)
chr8 (58-94)||(8885448-8885484)
chr8 (58-94)||(9073632-9073668)
chr8 (58-94)||(14164052-14164088)
chr8 (232-284)||(17120082-17120134)
chr8 (58-94)||(27927936-27927972)
chr8 (58-94)||(40392664-40392700)
chr8 (58-94)||(40994920-40994956)
chr8 (58-94)||(42280886-42280922)
chr8 (293-324)||(17119312-17119343)
chr8 (98-156)||(42280957-42281016)
chr8 (59-94)||(44106351-44106386)
chr8 (105-158)||(9073536-9073590)
chr8 (98-155)||(16310634-16310692)
chr8 (108-158)||(36404232-36404281)
chr8 (98-155)||(37248593-37248651)
chr8 (58-92)||(41530805-41530839)
chr8 (98-158)||(27928007-27928068)
chr8 (58-94)||(3094813-3094849)
chr8 (58-94)||(16310727-16310763)
chr8 (98-149)||(21004430-21004482)
chr8 (58-94)||(28916903-28916939)
chr8 (58-94)||(34853456-34853492)
chr8 (284-324)||(35676813-35676853)
chr8 (58-94)||(36165833-36165869)
chr8 (58-94)||(37248686-37248722)
[»] scaffold0137 (1 HSPs)
scaffold0137 (105-158)||(9570-9624)
[»] scaffold0006 (2 HSPs)
scaffold0006 (58-94)||(59488-59524)
scaffold0006 (58-94)||(59965-60001)
[»] scaffold0182 (1 HSPs)
scaffold0182 (58-86)||(23238-23266)


Alignment Details
Target: chr5 (Bit Score: 150; Significance: 3e-79; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 8032423 - 8032258
Alignment:
Q  1 agtattttatttcgaactatttatttggttctcaatttcatccttcatattcagtttaaatgactatccatgttacaaacatgtttaaaatttgagtttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8032423 agtattttatttcgaactatttatttggttctcaatttcatccttcatattcagtttaaatgactatccatgttataaacatgtttaaaatttgagtttt 8032324  T
Q  101 tcccttgaaaaagggtgtttagg-ggtgttcggattatgtaatccggaaaaatcatgtagtgtgcc 165  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8032323 tcccttgaaaaagggtgtttaggaggtgttcggattatgtaatccggaaaaatcatgtaatgtgcc 8032258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 8032118 - 8032048
Alignment:
Q  282 acagggcgcgctagtcatgcatagggtgggaaaagtaatactcaaattatcctagcttttgatctcacgat 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  8032118 acagggcgcgctagtcatgcatagggtgggaaaagtaatactcaaattatcccaacttttgatctcacgat 8032048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 32842231 - 32842276
Alignment:
Q  282 acagggcgcgctagtcatgcatagggtgggaaaagtaatactcaaa 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32842231 acagggcgcgctagtcatgcatagggtgggaaaagtaatactcaaa 32842276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 14111993 - 14111891
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttgag-tttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcat 155  Q
    ||||||||||||||||||||||||| ||||||||||| | |  | | |||||||||||||||||||||| | ||| |||||||||||||  ||| |||||    
T  14111993 aaatgactatccatgttacaaacatatttaaaatttgtgctgatacacttgaaaaagggtgtttaggggattttcagattatgtaatccaaaaacatcat 14111894  T
Q  156 gta 158  Q
    |||    
T  14111893 gta 14111891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 8032191 - 8032150
Alignment:
Q  232 caccatataacaaaggaaaaactgaatccgaattttaaaatc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8032191 caccatataacaaaggaaaaactgaatccgaattttaaaatc 8032150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 32842036 - 32842093
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaat 152  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  32842036 gtttttcccttgaaaaagggtgtttatggggtgttcggattatgtaatcttgaaaaat 32842093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 38692849 - 38692905
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatca 154  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  38692849 ttttaccttgaaaaagggtgtttaggggtttccggattatgtaatccggaaacatca 38692905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 38640766 - 38640719
Alignment:
Q  108 aaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcat 155  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  38640766 aaaaagggtgtttaggggtgttcggattatgtaatccgaataaatcat 38640719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 15799273 - 15799219
Alignment:
Q  105 ttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  15799273 ttgaaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgta 15799219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 20891668 - 20891607
Alignment:
Q  98 ttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||||    
T  20891668 ttttaccttgaaaaagggtgtttagggggttttcggattatgtaattcggaaacatcatgta 20891607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 31929119 - 31929155
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  31929119 aaatgactatccatgttacaaacatgtttaaaatttg 31929155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 32841966 - 32842002
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  32841966 aaatgactatccatgttacaaacatgtttaaaatttg 32842002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 1350375 - 1350430
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaa 151  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||  |||||||    
T  1350375 gtttttcccttgaaaaaagatgtttaggggtgttcggattatataatttggaaaaa 1350430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 26095147 - 26095092
Alignment:
Q  97 tttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaa 151  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  26095147 tttttcctttgaaaaagagtgtttatggggtgttcggattatgtaatccgaaaaaa 26095092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 26319162 - 26319111
Alignment:
Q  108 aaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  26319162 aaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgta 26319111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 27212765 - 27212702
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggg-gtgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||| |||||||||||| |||| |||||| | |||||||||||| ||||||||||||    
T  27212765 gtttttcccttcaaaaagggtgttcagggtgtgttctggttatgtaatccgaaaaaatcatgta 27212702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 4064786 - 4064844
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcat 155  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||||||||| |||||    
T  4064786 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcat 4064844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 28083451 - 28083505
Alignment:
Q  105 ttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||| |||| | |||||||||||||||||||| ||||||||    
T  28083451 ttgaaaaagggtgtttagagggtttccggattatgtaatccggaaatatcatgta 28083505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 32841457 - 32841415
Alignment:
Q  282 acagggcgcgctagtcatgcatagggtgggaaaagtaatactc 324  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  32841457 acagggcgagctagtcatgcatagggtggaaaaagtaatactc 32841415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 6156786 - 6156725
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||| ||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  6156786 ttttaccttgaaagagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 6156725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 31221405 - 31221466
Alignment:
Q  98 ttttcccttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||| |||| | ||||||||||||||| |||| ||||||||    
T  31221405 ttttaccttgaaaaagggtgtttagagggtttccggattatgtaatccagaaacatcatgta 31221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 38871726 - 38871665
Alignment:
Q  98 ttttcccttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| | ||||||| |||| |||||||||||||||||||||| ||||||||    
T  38871726 ttttaccttgaaaaaagatgtttagagggttttcggattatgtaatccggaaacatcatgta 38871665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 4064715 - 4064751
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  4064715 aaatgactatccatgttacaaacatgtttagaatttg 4064751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 13908604 - 13908540
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttagg-ggtgttcggattatgtaatccggaaaaatcatgtag 159  Q
    |||||||||||||||||| ||||||||| |||||||  ||||| ||||||| |||||||| ||||    
T  13908604 gtttttcccttgaaaaagagtgtttaggaggtgttcaaattatataatccgaaaaaatcaagtag 13908540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 15799351 - 15799315
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  15799351 aaatgactatccatgttacaaacatgtttagaatttg 15799315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 20891739 - 20891703
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  20891739 aaatgactatccatgttacaaacatgtttagaatttg 20891703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 25747151 - 25747115
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  25747151 aaatgactatccatgttacaaacatgtttagaatttg 25747115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 29862738 - 29862702
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29862738 aaatgactatccatgttacaaacatgtttagaatttg 29862702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 31221334 - 31221370
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31221334 aaatgactatccatgttacaaacatgtttataatttg 31221370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 38871797 - 38871761
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  38871797 aaatgactatccatgttacaaacatgtttagaatttg 38871761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 6156857 - 6156822
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaattt 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  6156857 aaatgactatccatgttacaaacatgtttagaattt 6156822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 13908674 - 13908639
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaattt 93  Q
    |||||||||||| |||||||||||||||||||||||    
T  13908674 aaatgactatccgtgttacaaacatgtttaaaattt 13908639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 24203760 - 24203811
Alignment:
Q  108 aaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  24203760 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 24203811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 16429198 - 16429164
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatt 92  Q
    |||||||||||||||||||||||||||||| ||||    
T  16429198 aaatgactatccatgttacaaacatgtttagaatt 16429164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 37094992 - 37095042
Alignment:
Q  108 aaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||| |||| ||||||||  |||||||||||| ||||||||    
T  37094992 aaaaagggtgtttaagggttttcggatttggtaatccggaaacatcatgta 37095042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 15957804 - 15957743
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||| |||||||||||||  ||| ||||||| ||||||||||| ||||||||    
T  15957804 ttttaccttgaaaatgggtgtttagggggtttccggattatttaatccggaaacatcatgta 15957743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 26095216 - 26095183
Alignment:
Q  60 atgactatccatgttacaaacatgtttaaaattt 93  Q
    |||||||||||||||||||||||||||| |||||    
T  26095216 atgactatccatgttacaaacatgtttagaattt 26095183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 29862667 - 29862610
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatca 154  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||    
T  29862667 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaacatca 29862610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 38372364 - 38372303
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||| |||| ||||| | || ||||||||||||||||| ||||||||    
T  38372364 ttttaccttgaaaaagggtatttaaggggtttccgaattatgtaatccggaaacatcatgta 38372303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 39524831 - 39524770
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | || ||||||||||||| ||| ||||||||    
T  39524831 ttttaccttgaaaaagggtgtttagggggtttccgaattatgtaatccgaaaacatcatgta 39524770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 28083373 - 28083409
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  28083373 aaatgactatccatgttacaaatatgtttataatttg 28083409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 33487736 - 33487700
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  33487736 aaatgactatccatgttacaaacatttttagaatttg 33487700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 37183776 - 37183812
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  37183776 aaatgactatccatgttacaaacatatttagaatttg 37183812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 38372435 - 38372399
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  38372435 aaatgactatccatgtaacaaacatgtttagaatttg 38372399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 38692778 - 38692814
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  38692778 aaatgattatccatgttacaaacatgtttagaatttg 38692814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 7412920 - 7412860
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  7412920 ttttaccttgaaaaagggtgtttaggggttttcggattatgtaatccggaaacatcatgta 7412860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 24604426 - 24604489
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||||||    
T  24604426 gtttttcccttgaaaaatggtgtttaaggggtgttcggattatgtaatccgaagaaatcatgta 24604489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 2813290 - 2813351
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  2813290 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 2813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 17264503 - 17264442
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  17264503 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 17264442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 5699646 - 5699590
Alignment:
Q  103 ccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  5699646 ccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 5699590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 9905212 - 9905149
Alignment:
Q  97 tttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgtag 159  Q
    |||||||||||||  | || ||||||||| ||||||||||||||||||||||||||||| ||||    
T  9905212 tttttcccttgaatgatggcgtttagggggtgttcggattatgtaatccggaaaaatcacgtag 9905149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 32035206 - 32035145
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  32035206 ttttaccttaaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 32035145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 1945525 - 1945561
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1945525 aaatgactatccatgttacaaacatgtttagaatttg 1945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 1945596 - 1945648
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaa 150  Q
    ||||| ||||||||| || |||||||||||||| |||||| ||||||||||||    
T  1945596 ttttcacttgaaaaatggggtttaggggtgttcagattatataatccggaaaa 1945648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 9905077 - 9905025
Alignment:
Q  232 caccatataacaaaggaaaaactgaatccgaattttaaaatccaaattgcaca 284  Q
    |||| ||||||||||||||||||||||||  ||||||||||||  ||||||||    
T  9905077 caccctataacaaaggaaaaactgaatccagattttaaaatccggattgcaca 9905025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 9905278 - 9905242
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9905278 aaatgattatccatgttacaaacatgtttaaaatttg 9905242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 14587555 - 14587591
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  14587555 aaatgactatccatgttacaaacatgtttagaatttg 14587591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 23406960 - 23406924
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  23406960 aaatgactatccatgttacaaacatgtttagaatttg 23406924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 5638955 - 5638894
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggg-gtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||||||  | |||  ||||||||||||||||| ||||||||    
T  5638955 ttttaccttgaaaaagggtgtttagggatttttcaaattatgtaatccggaaacatcatgta 5638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 2539615 - 2539579
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||| | ||||||    
T  2539615 aaatgactatccatgttacaaacatgttcagaatttg 2539579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 3717278 - 3717314
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  3717278 aaatgactatccatgttacagacatgtttagaatttg 3717314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 4508297 - 4508333
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  4508297 aaatgactatccatattacaaacatgtttagaatttg 4508333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 5699729 - 5699693
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  5699729 aaatgactatccatgttacaaacatatttagaatttg 5699693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 29289690 - 29289750
Alignment:
Q  96 gtttttcccttgaaaaag-ggtgttta-ggggtgttcggattatgtaatccggaaaaatca 154  Q
    ||||||| |||||||||  |||||||| ||||||||| |||||| ||||||||||||||||    
T  29289690 gtttttcacttgaaaaaatggtgtttaaggggtgttcagattatataatccggaaaaatca 29289750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 28866695 - 28866759
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatcatgtag 159  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  28866695 gtttttccctttaaaaagggtgtttagcgggtgttcagattatgtaatccggaaaaatcatgtag 28866759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 34006354 - 34006290
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgtag 159  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  34006354 gtttttcccttgaaaaagggtgtttatggggtgttcaaattatgtaatccggaaaaatcatgtag 34006290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 6223801 - 6223864
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||    
T  6223801 gtttttaccttgaaaaaggatgtttatggggtgttcggattatgtaatccaaaaaaatcatgta 6223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 32817677 - 32817738
Alignment:
Q  98 ttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||| ||||| ||||||||    
T  32817677 ttttaccttgaaaaagggtgtttagggggttttcggattatgtaatctggaaacatcatgta 32817738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 15069836 - 15069872
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  15069836 aaatgactatccatgttacaaacatgtttaaaatttg 15069872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 24472822 - 24472858
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  24472822 aaatgactatccatgttacaaacatgtttaaaatttg 24472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 34006155 - 34006116
Alignment:
Q  285 gggcgcgctagtcatgcatagggtgggaaaagtaatactc 324  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  34006155 gggcgcgttagtcatgcatagggtgggaaaagtaatactc 34006116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 49786351 - 49786301
Alignment:
Q  108 aaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  49786351 aaaaagggtgtttgggggtttccggattatgtaatccggaaacatcatgta 49786301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 24471390 - 24471442
Alignment:
Q  108 aaaaagggtgtttaggggtgtt--cggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  24471390 aaaaagggtgtttaggggggttttcggattatgtaatccggaaacatcatgta 24471442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 34006943 - 34006984
Alignment:
Q  284 agggcgcgctagtcatgcatagggtgggaaaagtaatactca 325  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  34006943 agggcgctctagtcatgcatagggtgggaaaaataatactca 34006984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 34162792 - 34162845
Alignment:
Q  103 ccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcat 155  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||| |||||    
T  34162792 ccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcat 34162845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 49677576 - 49677515
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||| |||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  49677576 ttttaccttgaaaaggggtgtttagggggtttctggattatgtaatccggaaacatcatgta 49677515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 6223741 - 6223777
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||||||||||    
T  6223741 aaatgactatccatgttacaaacatatttaaaatttg 6223777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 8364172 - 8364140
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaa 90  Q
    |||||||||||||||||||||||||||||||||    
T  8364172 aaatgactatccatgttacaaacatgtttaaaa 8364140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 17000542 - 17000506
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  17000542 aaatgactatccatgttacaaacatgtttagaatttg 17000506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 26723553 - 26723612
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgtag 159  Q
    ||||||||||| |||||||||||||| |||||||||||||||||     ||||||||||||||||    
T  26723553 gtttttcccttaaaaaagggtgtttagggggtgttcggattatg-----cggaaaaatcatgtag 26723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 28866625 - 28866661
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||| |||||||||||||||||||||||||||||||    
T  28866625 aaatggctatccatgttacaaacatgtttaaaatttg 28866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 34006424 - 34006388
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34006424 aaatgactatccatgttacaaacatctttaaaatttg 34006388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 40908010 - 40908062
Alignment:
Q  108 aaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgtag 159  Q
    |||||||||||||||||| | |||||||||||||||||| ||| |||||||||    
T  40908010 aaaaagggtgtttagggggttttcggattatgtaatccgaaaacatcatgtag 40908062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 41584660 - 41584696
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  41584660 aaatgactatccatgttacaaacatgtttagaatttg 41584696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 42546131 - 42546095
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  42546131 aaatgactatccatgttacaaacatgtttagaatttg 42546095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 45046845 - 45046881
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  45046845 aaatgactatccatgttacaaacatgtttagaatttg 45046881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 30829542 - 30829593
Alignment:
Q  108 aaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||| | |||||||||||||||||| ||| ||||||||    
T  30829542 aaaaagggtgtttagggggttttcggattatgtaatccgaaaacatcatgta 30829593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 43319272 - 43319323
Alignment:
Q  108 aaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||| ||||||||||| | |||||||||||||||||| ||||||||||||    
T  43319272 aaaaagagtgtttagggggttttcggattatgtaatccgaaaaaatcatgta 43319323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 3561400 - 3561457
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttag--gggtgttcggattatgtaatccggaaaaa 151  Q
    |||||||||||||||||||||||||||  |||||||| |||| | ||||||| |||||    
T  3561400 gtttttcccttgaaaaagggtgtttaggagggtgttcagattctataatccgaaaaaa 3561457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 15069913 - 15069969
Alignment:
Q  104 cttgaaaaagggtgtttaggggtgtt--cggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||| |||||||||||| |||  |||||||| ||||||||||| ||||||||    
T  15069913 cttgaaaaatggtgtttaggggggtttccggattatataatccggaaacatcatgta 15069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 32817606 - 32817635
Alignment:
Q  58 aaatgactatccatgttacaaacatgttta 87  Q
    ||||||||||||||||||||||||||||||    
T  32817606 aaatgactatccatgttacaaacatgttta 32817635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 33611476 - 33611537
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcg-gattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||||||||||||||||  |||  |||||||||||||||||| ||||||||    
T  33611476 ttttaccttaaaaaagggtgtttagggggtttccagattatgtaatccggaaacatcatgta 33611537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 40650741 - 40650802
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| |||||||| ||||| | ||||||||||||||| |||| ||||||||    
T  40650741 ttttaccttgaaaaatggtgtttaaggggtttccggattatgtaatccagaaacatcatgta 40650802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 42546060 - 42545999
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||| ||| ||||| ||||||| |||| ||||||||| ||||||||    
T  42546060 ttttaccttgaaaaagggtgcttagggggttttcggatcatgttatccggaaacatcatgta 42545999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 52744838 - 52744867
Alignment:
Q  58 aaatgactatccatgttacaaacatgttta 87  Q
    ||||||||||||||||||||||||||||||    
T  52744838 aaatgactatccatgttacaaacatgttta 52744867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 27794995 - 27794959
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  27794995 aaatgactatctatgttataaacatgtttaaaatttg 27794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 34162717 - 34162753
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  34162717 aaatggctatccatgttacaaacatgtttagaatttg 34162753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 40907929 - 40907965
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  40907929 aaatgattatccatgttacaaacatgtttagaatttg 40907965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 41584741 - 41584797
Alignment:
Q  103 ccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||| ||| ||||||||    
T  41584741 ccttgaaaaaggatgtttagggggtttccggattatgtaatccgaaaacatcatgta 41584797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 44573092 - 44573128
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  44573092 aaatgactattcatgttacaaacatgtttataatttg 44573128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 45567885 - 45567921
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  45567885 aaatgactatccatattacaaacatgtttagaatttg 45567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 6467792 - 6467729
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  6467792 gtttttcccttgaaaaagggtgtttagggggtgttcggattatgtaatccgaacaaatcatgta 6467729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 7114799 - 7114754
Alignment:
Q  282 acagggcgcgctagtcatgcatagggtgggaaaagtaatactcaaa 327  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  7114799 acagggcgcgctagtcatgcatagggtgggaaaagtaatagtcaaa 7114754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 3936201 - 3936140
Alignment:
Q  98 ttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||||||| | || ||||||||||||||||||| ||||||||    
T  3936201 ttttaccttgaaaaagggtgtttagggggtttttggattatgtaatccggaaacatcatgta 3936140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 8154992 - 8154931
Alignment:
Q  98 ttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||    
T  8154992 ttttaccttaaaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgta 8154931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 31985588 - 31985645
Alignment:
Q  102 cccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||    
T  31985588 cccttgaaaaatggtgtttaaggggtgttcgaattatgtaatccgaaaaaatcatgta 31985645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 24689817 - 24689777
Alignment:
Q  284 agggcgcgctagtcatgcatagggtgggaaaagtaatactc 324  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  24689817 agggcgcgctagtcatgcatagggtggaaaaagtaatactc 24689777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 6467205 - 6467264
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatca 154  Q
    ||||||||||||||||| | ||||||| ||||||||||||| | ||||||||||||||||    
T  6467205 gtttttcccttgaaaaatgatgtttagagggtgttcggattctataatccggaaaaatca 6467264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 24690398 - 24690457
Alignment:
Q  96 gtttttcccttgaaaaagggtgttt-aggggtgttcggattatgtaatccggaaaaatca 154  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||| | ||||||||    
T  24690398 gtttttcccttgaaaaagggtgtttgaggggtgttcggattgtataatctgaaaaaatca 24690457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 24042254 - 24042315
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  24042254 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgta 24042315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 28230534 - 28230591
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatca 154  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||||||||| ||||    
T  28230534 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatca 28230591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 47202587 - 47202526
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  47202587 ttttaccttaaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 47202526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 9151960 - 9151924
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9151960 aaatgactatccatgttacaaacatgtttagaatttg 9151924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 28230463 - 28230499
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  28230463 aaatgactatccatgttacaaacatgtttagaatttg 28230499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 36468532 - 36468568
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36468532 aaatgactatccatgttacaaacatgtttagaatttg 36468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 42925636 - 42925672
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  42925636 aaatgactatccatgttacaaacatgtttagaatttg 42925672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 5278428 - 5278393
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaattt 93  Q
    |||||||||||||||||||||||||||| |||||||    
T  5278428 aaatgactatccatgttacaaacatgttcaaaattt 5278393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 7115477 - 7115524
Alignment:
Q  237 tataacaaaggaaaaactgaatccgaattttaaaatccaaattgcaca 284  Q
    |||||||||||||||||||||| |  |||||||||||||||| |||||    
T  7115477 tataacaaaggaaaaactgaattcagattttaaaatccaaatcgcaca 7115524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 19225670 - 19225725
Alignment:
Q  104 cttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  19225670 cttgaaaaatggtgtttaggggatttccggattatgtaatccggaaacatcatgta 19225725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 31643134 - 31643073
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||||||||||| ||||  ||| ||||||||||||||||||| ||||||||    
T  31643134 ttttaccttaaaaaagggtgtttggggggtttccggattatgtaatccggaaacatcatgta 31643073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 37518361 - 37518422
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| |||||||||||||||||||  |||||||    
T  37518361 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaacttcatgta 37518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 42925707 - 42925768
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||| ||| ||||||||    
T  42925707 ttttaccttgaaaaaaggtgtttagggggtttccggattatgtaatccgaaaacatcatgta 42925768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 3936272 - 3936236
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  3936272 aaatgattatccatgttacaaacatgtttacaatttg 3936236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 19225593 - 19225629
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  19225593 aaatgaatatccatgttacaaacatgtttagaatttg 19225629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 24042183 - 24042219
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24042183 aaatgactatcaatgttacaaacatgtttagaatttg 24042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 30861198 - 30861142
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaa 151  Q
    ||||||||| ||||||| |||||||| |||||||||||||| | ||||||| |||||    
T  30861198 gtttttcccctgaaaaaaggtgtttatggggtgttcggattctataatccgaaaaaa 30861142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 36408535 - 36408499
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  36408535 aaattactatccatgttacaaacatgtttagaatttg 36408499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 42865097 - 42865133
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  42865097 aaatgactatccatgttacaaacatatttagaatttg 42865133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 43185946 - 43185910
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  43185946 aaatgattatccatgttataaacatgtttaaaatttg 43185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 25538974 - 25539075
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttgagtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatg 156  Q
    |||||||||||||||||||||||||||||| |||||| | |  | ||||||||||  ||||||| ||||| | ||||||||||||||| |||| ||||||    
T  25538974 aaatgactatccatgttacaaacatgtttagaatttgtgctgataccttgaaaaatagtgtttagggggtttccggattatgtaatccagaaacatcatg 25539073  T
Q  157 ta 158  Q
    ||    
T  25539074 ta 25539075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 3703314 - 3703377
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||    
T  3703314 gtttttcccttgaaaaatggtgtttagggggtgttcgaattatgtaatccgaaaaaatcatgta 3703377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 8106494 - 8106431
Alignment:
Q  97 tttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgtag 159  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8106494 tttttccctagaaaaatggtgtttagggggtgttcggattatgtaatacggaaaaatcatgtag 8106431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 2506097 - 2506158
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  2506097 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 2506158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 19835621 - 19835560
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  19835621 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 19835560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 25752510 - 25752571
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||    
T  25752510 ttttaccttgaaaaagggtgtttatggggttttcggattatgtaatctggaaacatcatgta 25752571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 46440340 - 46440401
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  46440340 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 46440401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 2506026 - 2506062
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  2506026 aaatgactatccatgttacaaacatgtttaaaatttg 2506062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 8106565 - 8106529
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  8106565 aaatgactatccatgttacaaacatgtttaaaatttg 8106529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 8106353 - 8106306
Alignment:
Q  237 tataacaaaggaaaaactgaatccgaattttaaaatccaaattgcaca 284  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  8106353 tataacaaaggaaaaactgaatccggattttaaaatcctgattgcaca 8106306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 41323157 - 41323203
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggggtgttcggattatgtaat 142  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||    
T  41323157 gtttttcccttgaaaaagggtgtttaagggtgttccgattatataat 41323203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 8106283 - 8106242
Alignment:
Q  284 agggcgcgctagtcatgcatagggtgggaaaagtaatactca 325  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  8106283 agggcgcactagtcatgcatagggtgggtaaagtaatactca 8106242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 25491461 - 25491522
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  25491461 ttttaccttgaaaaaaggtgtttagggggtttccggattatgtaatccggaaacatcatgta 25491522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 40703765 - 40703704
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| ||| | |||||||||||||||| ||||||||    
T  40703765 ttttaccttgaaaaagggtgtttagggggttttcaggttatgtaatccggaaacatcatgta 40703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 19835692 - 19835656
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19835692 aaatgactatccatgttacaaacatgtttagaatttg 19835656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 25752439 - 25752475
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  25752439 aaatgactatccatgttacaaacatgtttagaatttg 25752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 27181515 - 27181547
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaa 90  Q
    |||||||||||||||||||||||||||||||||    
T  27181515 aaatgactatccatgttacaaacatgtttaaaa 27181547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 31582417 - 31582453
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31582417 aaatgactatccatgttacaaacatgtttagaatttg 31582453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 32441911 - 32441851
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| |||||  |||||||||||| | |||||||||||||||||||| ||||||||    
T  32441911 ttttaccttaaaaaaatgtgtttaggggtttccggattatgtaatccggaaacatcatgta 32441851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 38416641 - 38416605
Alignment:
Q  122 ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||||||||||| ||||||||||||    
T  38416641 ggggtgttcggattatgtaatccgaaaaaatcatgta 38416605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 40703836 - 40703800
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  40703836 aaatgactatccatgttacaaacatgtttagaatttg 40703800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 52089357 - 52089321
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||||||||| |||||    
T  52089357 aaatgactatccatgttacaaacatgtttaagatttg 52089321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 53894020 - 53894056
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  53894020 aaatgactatccatgttacaaacatgtttagaatttg 53894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 55052614 - 55052650
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  55052614 aaatgactatccatgttacaaacatgtttagaatttg 55052650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 8107064 - 8107107
Alignment:
Q  282 acagggcgcgctagtcatgcatagggtgggaaaagtaatactca 325  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||    
T  8107064 acagggcgcactagtcatgcatatggtaggaaaagtaatactca 8107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 23523997 - 23523946
Alignment:
Q  108 aaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  23523997 aaaaagggtgtttagggggtttctggattatgtaatccggaaacatcatgta 23523946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 14474204 - 14474242
Alignment:
Q  56 ttaaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  14474204 ttaaacgactatccatgttacaaacatgttcaaaatttg 14474242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 25140917 - 25140951
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatt 92  Q
    |||||||||||||||||||||||||||| ||||||    
T  25140917 aaatgactatccatgttacaaacatgttcaaaatt 25140951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 55052685 - 55052743
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcat 155  Q
    |||| ||||||||||||||||||| ||||| | |||||||| ||||||||||| |||||    
T  55052685 ttttaccttgaaaaagggtgtttagggggtttccggattatataatccggaaacatcat 55052743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 17933203 - 17933264
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| |||||||||||||| ||||| | | |||||||||||||||||| ||||||||    
T  17933203 ttttaccttaaaaaagggtgtttaaggggtttccagattatgtaatccggaaacatcatgta 17933264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 29822720 - 29822659
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||| |||||||||| ||||| | |||||||||||||||| ||| ||||||||    
T  29822720 ttttaccttgaaagagggtgtttatggggtttccggattatgtaatccgaaaacatcatgta 29822659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 31582488 - 31582549
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||| | ||| ||||||||    
T  31582488 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatcagaaaacatcatgta 31582549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 38417000 - 38416963
Alignment:
Q  58 aaatgactatcca-tgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38417000 aaatgactatccaatgttacaaacatgtttaaaatttg 38416963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 38536271 - 38536210
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||| ||||| ||||||||    
T  38536271 ttttaccttgaaaaaaggtgtttagggggtttccggattatgtaatctggaaacatcatgta 38536210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 41413166 - 41413227
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| |||||| |||||||||||  ||| ||||||||||||||||||| ||||||||    
T  41413166 ttttaccttaaaaaagagtgtttagggggtttccggattatgtaatccggaaacatcatgta 41413227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 7931829 - 7931793
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  7931829 aaataactatccatgttacaaacatgtttagaatttg 7931793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 17933132 - 17933168
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  17933132 aaatgattatccatgttacaaacatgtttagaatttg 17933168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 25491390 - 25491426
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  25491390 aaatgactattcatgttacaaacatgtttagaatttg 25491426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 38536342 - 38536306
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  38536342 aaatgactattcatgttacaaacatgtttagaatttg 38536306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 41323087 - 41323123
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  41323087 aaatgattatccatgttacaaacatgtttagaatttg 41323123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 48319059 - 48319095
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  48319059 aaatgactatcaatgttacaaacatgtttagaatttg 48319095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 30721870 - 30721933
Alignment:
Q  97 tttttcccttgaaaaagggtgtttagggg--tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||    
T  30721870 tttttcccttgaaaaatggtgtttaggggagtgttcggattatgtaatccgaaaaaatcatgta 30721933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 51258497 - 51258434
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||    
T  51258497 gtttttcccttgaaaaatggtgtttagggggtgttcggattatgtaatccgaaaaaattatgta 51258434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 47739998 - 47740059
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  47739998 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 47740059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 5127964 - 5128019
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaa 151  Q
    ||||||||||||||||   |||||||| |||||||||||||| |||||||||||||    
T  5127964 gtttttcccttgaaaataagtgtttagaggtgttcggattatataatccggaaaaa 5128019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 47302102 - 47302051
Alignment:
Q  108 aaaaagggtgtttagg-ggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  47302102 aaaaagggtgtttaggaggttttcggattatgtaatccggaaacatcatgta 47302051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 49096293 - 49096354
Alignment:
Q  98 ttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||| |||||||||| |||| |||||||||||| || ||||||||||||    
T  49096293 tttttccttgaaaaaggctgtttagggggtgtttggattatgtaattcgaaaaaatcatgta 49096354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 50716345 - 50716284
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||||    
T  50716345 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatctggaaacatcatgta 50716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 50796502 - 50796563
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||||    
T  50796502 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatctggaaacatcatgta 50796563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 3352061 - 3352097
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3352061 aaatgactatccatgttacaaacatgtttagaatttg 3352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 29048437 - 29048381
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaa 151  Q
    ||||||||||||||||||| |||||| |||||||||||||| | ||||||| |||||    
T  29048437 gtttttcccttgaaaaaggatgtttagggggtgttcggattctataatccgaaaaaa 29048381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 35142238 - 35142202
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  35142238 aaatgactatccatgttacaaacatgtttagaatttg 35142202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 38977743 - 38977779
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  38977743 aaatgactatccatgttacaaacatgtttataatttg 38977779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 49096222 - 49096258
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||||||||||||||||||||||    
T  49096222 aaatgactatctatgttacaaacatgtttaaaatttg 49096258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 51258567 - 51258531
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51258567 aaatgactatccatgttataaacatgtttaaaatttg 51258531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 51816335 - 51816280
Alignment:
Q  100 ttcccttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatca 154  Q
    ||||||||||||||||||||||| |||||||||| || | ||||||| ||||||||    
T  51816335 ttcccttgaaaaagggtgtttagagggtgttcgggttctataatccgaaaaaatca 51816280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 33842069 - 33842103
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatt 92  Q
    |||||||||||||| ||||||||||||||||||||    
T  33842069 aaatgactatccatattacaaacatgtttaaaatt 33842103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 47739925 - 47739963
Alignment:
Q  56 ttaaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  47739925 ttaaatgactatctatgttacaaacatgtttagaatttg 47739963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 3352132 - 3352193
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcgga-ttatgtaatccggaaaaatcatgta 158  Q
    |||| |||||| ||||||||||||||||  ||| || |||||||||||||||| ||||||||    
T  3352132 ttttaccttgataaagggtgtttagggggtttccgaattatgtaatccggaaacatcatgta 3352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 3902872 - 3902933
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||||  ||| ||||||||    
T  3902872 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccaaaaacatcatgta 3902933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 34821409 - 34821470
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||| ||| ||||||||    
T  34821409 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccgaaaacatcatgta 34821470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 35142167 - 35142106
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  35142167 ttttaccttaaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgta 35142106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 43473035 - 43473096
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  43473035 ttttaccttaaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgta 43473096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 51540680 - 51540741
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| |||||||| ||||| | ||||||||||||| |||||| ||||||||    
T  51540680 ttttaccttgaaaaacggtgtttaaggggtttccggattatgtaattcggaaacatcatgta 51540741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 501136 - 501172
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  501136 aaatgactatccattttacaaacatgtttagaatttg 501172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 5127901 - 5127929
Alignment:
Q  65 tatccatgttacaaacatgtttaaaattt 93  Q
    |||||||||||||||||||||||||||||    
T  5127901 tatccatgttacaaacatgtttaaaattt 5127929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 28873169 - 28873133
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  28873169 aaatgactatctatgttacaaacatgtttagaatttg 28873133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 29035878 - 29035842
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||| | ||||||    
T  29035878 aaatgactatccatgttacaaacatgttcagaatttg 29035842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 33438685 - 33438649
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  33438685 aaatgactatccatattacaaacatgtttagaatttg 33438649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 34821338 - 34821374
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  34821338 aaatgactatctatgttacaaacatgtttagaatttg 34821374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 39149902 - 39149850
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaa 149  Q
    |||| |||||||||| ||||||||||||  ||| |||||||||||||||||||    
T  39149902 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaa 39149850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 39149973 - 39149937
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||| | |||||||||||||||||||||||||    
T  39149973 aaatgactaccaatgttacaaacatgtttaaaatttg 39149937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 47123190 - 47123154
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  47123190 aaatgattatccatgttacaaacatgtttagaatttg 47123154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 47769426 - 47769390
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||| | ||||||    
T  47769426 aaatgactatccatgttacaaacatgttcagaatttg 47769390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 50716416 - 50716380
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  50716416 aaatgactattcatgttacaaacatgtttagaatttg 50716380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 50796431 - 50796467
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  50796431 aaatgactattcatgttacaaacatgtttagaatttg 50796467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 51540609 - 51540645
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  51540609 aaatgactatccaagttacaaacatgtttagaatttg 51540645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 25217852 - 25217912
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||| |||||||||||||| | |||||||||||||||||||| ||||||||    
T  25217852 ttttaccttgaaaaggggtgtttaggggtttccggattatgtaatccggaaacatcatgta 25217912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 41203246 - 41203310
Alignment:
Q  96 gtttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgtag 159  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  41203246 gtttttctctttaaaaagggtgtttacggggtgttcggattatgtaatccagaaaaattatgtag 41203310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 38066733 - 38066792
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcat 155  Q
    |||||||||||||||| ||||||||| ||||||| || |||||||||||| |||||||||    
T  38066733 gtttttcccttgaaaaggggtgtttatgggtgtttgggttatgtaatccgaaaaaatcat 38066792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 4268299 - 4268360
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  4268299 ttttaccttgaaaaagggtgtttatggggtttccggattatgtaatccggaaacatcatgta 4268360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15995180 - 15995233
Alignment:
Q  104 cttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatg 156  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  15995180 cttgaaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatg 15995233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 45153852 - 45153913
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  45153852 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 45153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 17474789 - 17474825
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  17474789 aaatgactatccatgttacaaacatgtttaaaatttg 17474825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 41203176 - 41203212
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||||||||||    
T  41203176 aaatgactatccatgttacaaacatgtttaaaatttg 41203212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 34517195 - 34517133
Alignment:
Q  96 gtttttcccttgaaaaagggtgttt-aggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||||| ||||||| |||||| || |||||||||||||| |||||||||||||    
T  34517195 gtttttcccttgaaaaatggtgtttaaggggtatttggattatgtaatcc-gaaaaatcatgta 34517133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 33452504 - 33452565
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggg-gtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||| || | |||||||||| ||||||||| ||||||||    
T  33452504 ttttaccttgaaaaagggtgtttagggagtttccggattatgtgatccggaaacatcatgta 33452565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 41854960 - 41855021
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | ||||| |||||||||||||| ||||||||    
T  41854960 ttttaccttgaaaaagggtgtttagggggtttccggatcatgtaatccggaaacatcatgta 41855021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 42894470 - 42894409
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  42894470 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgta 42894409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 5507583 - 5507547
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5507583 aaatgactatccatgttacaaacatgtttagaatttg 5507547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 32187859 - 32187895
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32187859 aaatgactatccatgttacaaacatatttaaaatttg 32187895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 38308322 - 38308278
Alignment:
Q  282 acagggcgcgctagtcatgcatagggtgggaaaagtaatactcaa 326  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||    
T  38308322 acagagcgcgccagtcatgcatagggtgggaaaagtaatagtcaa 38308278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 39447326 - 39447290
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  39447326 aaatgactatccatgttacaaacatgtttagaatttg 39447290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 15995103 - 15995138
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaattt 93  Q
    |||||||||||||||||||||||||||||| |||||    
T  15995103 aaatgactatccatgttacaaacatgtttagaattt 15995138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 30763737 - 30763679
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatca 154  Q
    |||||||  |||||||| |||||||| ||||||||||||||| ||||||  ||||||||    
T  30763737 gtttttcttttgaaaaatggtgtttaagggtgttcggattatataatccaaaaaaatca 30763679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 17474860 - 17474921
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||  |||||||||||  ||| ||||||||||||||||||| ||||||||    
T  17474860 ttttaccttgaaaaattgtgtttagggggtttccggattatgtaatccggaaacatcatgta 17474921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 32187930 - 32187991
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||| ||||||||    
T  32187930 ttttaccttgaaaaatggtgtttcgggggtttccggattatgtaatccggaaacatcatgta 32187991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 36875078 - 36875017
Alignment:
Q  98 ttttcccttgaaaaagggtgtttag-gggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| |||||| || |||| | |||||||||||||||||||| ||||||||    
T  36875078 ttttaccttgaaaaatggtgttcagagggtttccggattatgtaatccggaaacatcatgta 36875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 154
Target Start/End: Original strand, 38308879 - 38308912
Alignment:
Q  121 aggggtgttcggattatgtaatccggaaaaatca 154  Q
    ||||||||||||||||| ||||||||||||||||    
T  38308879 aggggtgttcggattatataatccggaaaaatca 38308912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 39447255 - 39447194
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | | |||||||||||||| ||| ||||||||    
T  39447255 ttttaccttgaaaaagggtgtttatggggtttccagattatgtaatccgaaaacatcatgta 39447194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 45153781 - 45153810
Alignment:
Q  58 aaatgactatccatgttacaaacatgttta 87  Q
    ||||||||||||||||||||||||||||||    
T  45153781 aaatgactatccatgttacaaacatgttta 45153810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 19110075 - 19110103
Alignment:
Q  97 tttttcccttgaaaaagggtgtttagggg 125  Q
    |||||||||||||||||||||||||||||    
T  19110075 tttttcccttgaaaaagggtgtttagggg 19110103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 25217765 - 25217801
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  25217765 aaatgactatccatgctacaaacatgtttagaatttg 25217801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 33366995 - 33366959
Alignment:
Q  122 ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  33366995 ggggttttcggattatgtaatccggaaatatcatgta 33366959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 33452433 - 33452469
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  33452433 aaatgattatccatgttacaaacatgtttagaatttg 33452469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 38308980 - 38309032
Alignment:
Q  232 caccatataacaaaggaaaaactgaatccgaattttaaaatccaaattgcaca 284  Q
    |||| |||||||||||||||||||||| || |||  ||||||| |||||||||    
T  38308980 caccctataacaaaggaaaaactgaattcggattacaaaatccgaattgcaca 38309032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 44465717 - 44465753
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  44465717 aaatgactaaccatgttacaaacatgtttagaatttg 44465753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 3461 - 3522
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  3461 ttttaccttgaaaaagggtgtttatggggtttccggattatgtaatccggaaacatcatgta 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 142029 - 142090
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  142029 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 142090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 141958 - 141994
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  141958 aaatgactatccatgttacaaacatgtttagaatttg 141994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 44106316 - 44106255
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  44106316 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 44106255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 1076650 - 1076595
Alignment:
Q  96 gtttttcccttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaa 151  Q
    ||||||||||||||||   ||||||||||||||||||||||| ||||| |||||||    
T  1076650 gtttttcccttgaaaataagtgtttaggggtgttcggattatataatctggaaaaa 1076595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 36980673 - 36980623
Alignment:
Q  104 cttgaaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatca 154  Q
    |||||||||||||||||||||||||||||||  | ||||||| ||||||||    
T  36980673 cttgaaaaagggtgtttaggggtgttcggatgctataatccgaaaaaatca 36980623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 3094774 - 3094713
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  3094774 ttttaccttgaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgta 3094713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 8885519 - 8885580
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| ||||||||| |||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  8885519 ttttaccttgaaaatgggtgtttagggggtttccggattatgtaatccggaaacatcatgta 8885580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 31519958 - 31520019
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||| ||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  31519958 ttttaccttaaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgta 31520019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 35676629 - 35676662
Alignment:
Q  122 ggggtgttcggattatgtaatccggaaaaatcat 155  Q
    ||||||||||||||||||||||||||||||||||    
T  35676629 ggggtgttcggattatgtaatccggaaaaatcat 35676662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 40994885 - 40994824
Alignment:
Q  98 ttttcccttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||| |||||||||||||||| | ||| |||||||||||||||||| ||||||||    
T  40994885 ttttaccttgataaagggtgtttagggggttttcagattatgtaatccggaaacatcatgta 40994824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 8885448 - 8885484
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8885448 aaatgactatccatgttacaaacatgtttagaatttg 8885484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 9073668 - 9073632
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9073668 aaatgactatccatgttacaaacatgtttagaatttg 9073632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 14164052 - 14164088
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  14164052 aaatgactatccatgttacaaacatgtttagaatttg 14164088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 17120082 - 17120134
Alignment:
Q  232 caccatataacaaaggaaaaactgaatccgaattttaaaatccaaattgcaca 284  Q
    |||| |||||||||||||||||||||| || ||| ||||||||| ||||||||    
T  17120082 caccctataacaaaggaaaaactgaattcggattataaaatccacattgcaca 17120134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 27927936 - 27927972
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27927936 aaatgactatccatgttacaaacatgtttagaatttg 27927972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 40392700 - 40392664
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  40392700 aaatgactatccatgttacaaacatgtttagaatttg 40392664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 40994956 - 40994920
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||||||||||||||||| ||||||    
T  40994956 aaatgactatccatgttacaaacatgtttagaatttg 40994920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 42280886 - 42280922
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||||||||||    
T  42280886 aaatgactatgcatgttacaaacatgtttaaaatttg 42280922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 324
Target Start/End: Complemental strand, 17119343 - 17119312
Alignment:
Q  293 tagtcatgcatagggtgggaaaagtaatactc 324  Q
    ||||||||||||||||||||||||||||||||    
T  17119343 tagtcatgcatagggtgggaaaagtaatactc 17119312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 42280957 - 42281016
Alignment:
Q  98 ttttcccttgaaaaagggtgttta-ggggtgttcggattatgtaatccggaaaaatcatg 156  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||    
T  42280957 ttttaccttgaaaaagggtgtttagggggtttccggattatgtaatctggaaacatcatg 42281016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 44106386 - 44106351
Alignment:
Q  59 aatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||||||| ||||||    
T  44106386 aatgactatccatgttacaaacatgtttagaatttg 44106351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 9073590 - 9073536
Alignment:
Q  105 ttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcatgta 158  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  9073590 ttgaaaaaaggtgtttagggggtttctggattatgtaatccggaaacatcatgta 9073536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 16310692 - 16310634
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggg-gtgttcggattatgtaatccggaaaaatcat 155  Q
    |||| |||||||||||||||||||||| || |  ||||| |||||||||||||||||||    
T  16310692 ttttaccttgaaaaagggtgtttagggagtttctggattgtgtaatccggaaaaatcat 16310634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 36404232 - 36404281
Alignment:
Q  108 aaaaagggtgtttaggggtgttcggattatgtaatccggaaaaatcatgta 158  Q
    |||||||||||||||| || |||||||||| |||||| |||||||||||||    
T  36404232 aaaaagggtgtttaggagttttcggattatataatcc-gaaaaatcatgta 36404281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 37248651 - 37248593
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttc-ggattatgtaatccggaaaaatcat 155  Q
    |||| |||||||||| ||||||||||||  ||| ||||||||||||||||||| |||||    
T  37248651 ttttaccttgaaaaatggtgtttagggggtttctggattatgtaatccggaaacatcat 37248593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 41530839 - 41530805
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatt 92  Q
    |||||||||||||||||||||||||||| ||||||    
T  41530839 aaatgactatccatgttacaaacatgttcaaaatt 41530805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 27928007 - 27928068
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggggtgttcg-gattatgtaatccggaaaaatcatgta 158  Q
    |||| |||||||||| ||||||||||||  |||  |||||||||||||||||| ||||||||    
T  27928007 ttttaccttgaaaaatggtgtttagggggtttcctgattatgtaatccggaaacatcatgta 27928068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 3094849 - 3094813
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  3094849 aaatgattatccatgttacaaacatgtttagaatttg 3094813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 16310763 - 16310727
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  16310763 aaatgactattcatgttacaaacatgtttagaatttg 16310727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 21004482 - 21004430
Alignment:
Q  98 ttttcccttgaaaaagggtgtttaggg-gtgttcggattatgtaatccggaaa 149  Q
    |||| |||| ||||| ||||||||||| || ||||||||||||||||||||||    
T  21004482 ttttaccttaaaaaatggtgtttagggagttttcggattatgtaatccggaaa 21004430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 28916939 - 28916903
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  28916939 aaatgactatccatgtaacaaacatgtttagaatttg 28916903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 34853492 - 34853456
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  34853492 aaatgactatccatgttacaaacatttttagaatttg 34853456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 35676813 - 35676853
Alignment:
Q  284 agggcgcgctagtcatgcatagggtgggaaaagtaatactc 324  Q
    ||||||||||||  ||| |||||||||||||||||||||||    
T  35676813 agggcgcgctagaaatgtatagggtgggaaaagtaatactc 35676853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 36165833 - 36165869
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  36165833 aaataactatccatgttacaaacatgtttacaatttg 36165869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 37248722 - 37248686
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  37248722 aaatgactatccatgtaacaaacatgtttagaatttg 37248686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 9570 - 9624
Alignment:
Q  105 ttgaaaaagggtgtttagggg-tgttcggattatgtaatccggaaaaatcatgta 158  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||    
T  9570 ttgaaaaagggtgttcagggggttttcggattatgtaatccggaaacatcatgta 9624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 59524 - 59488
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    |||||||||||||||| ||||||||||||||||||||    
T  59524 aaatgactatccatgtcacaaacatgtttaaaatttg 59488  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 59965 - 60001
Alignment:
Q  58 aaatgactatccatgttacaaacatgtttaaaatttg 94  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  59965 aaatgactatctatgttacaaacatgttcaaaatttg 60001  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 23266 - 23238
Alignment:
Q  58 aaatgactatccatgttacaaacatgttt 86  Q
    |||||||||||||||||||||||||||||    
T  23266 aaatgactatccatgttacaaacatgttt 23238  T

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