View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6690_low_25 (Length: 293)

Name: NF6690_low_25
Description: NF6690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6690_low_25
NF6690_low_25
[»] scaffold0117 (2 HSPs)
scaffold0117 (22-260)||(25717-25955)
scaffold0117 (45-217)||(40464-40636)
[»] chr7 (48 HSPs)
chr7 (22-220)||(40554745-40554942)
chr7 (23-220)||(8756378-8756574)
chr7 (32-220)||(13898098-13898285)
chr7 (32-255)||(13256281-13256503)
chr7 (122-243)||(17467713-17467834)
chr7 (122-243)||(17585380-17585501)
chr7 (32-222)||(13698880-13699070)
chr7 (122-263)||(3048995-3049136)
chr7 (122-255)||(37380469-37380602)
chr7 (133-260)||(13866472-13866599)
chr7 (22-227)||(3288990-3289193)
chr7 (32-217)||(19486204-19486389)
chr7 (39-210)||(28720332-28720503)
chr7 (32-244)||(11054311-11054523)
chr7 (45-220)||(33001787-33001960)
chr7 (32-217)||(48274108-48274293)
chr7 (124-217)||(4280750-4280843)
chr7 (124-213)||(21734752-21734841)
chr7 (32-220)||(29004694-29004881)
chr7 (123-214)||(370704-370795)
chr7 (52-214)||(13757987-13758149)
chr7 (123-217)||(10063210-10063304)
chr7 (69-214)||(14251392-14251537)
chr7 (25-222)||(48744153-48744351)
chr7 (124-201)||(21734192-21734269)
chr7 (123-219)||(32494754-32494850)
chr7 (33-219)||(7822336-7822522)
chr7 (33-219)||(7829647-7829833)
chr7 (33-219)||(27102099-27102285)
chr7 (33-219)||(27109447-27109633)
chr7 (33-219)||(27176041-27176227)
chr7 (122-217)||(37784686-37784781)
chr7 (33-219)||(38784191-38784377)
chr7 (33-219)||(15951249-15951435)
chr7 (69-219)||(16383369-16383519)
chr7 (128-214)||(2190888-2190974)
chr7 (123-212)||(15927186-15927276)
chr7 (69-214)||(18980514-18980659)
chr7 (128-244)||(42057002-42057117)
chr7 (123-210)||(3170749-3170836)
chr7 (157-215)||(3894492-3894550)
chr7 (128-214)||(15525278-15525364)
chr7 (157-214)||(2028378-2028435)
chr7 (32-97)||(10063143-10063208)
chr7 (163-244)||(25123885-25123965)
chr7 (122-214)||(26070962-26071054)
chr7 (122-214)||(26094749-26094841)
chr7 (157-215)||(112008-112066)
[»] chr2 (38 HSPs)
chr2 (22-220)||(21245307-21245505)
chr2 (22-220)||(24273262-24273460)
chr2 (32-260)||(24087809-24088036)
chr2 (45-260)||(22703559-22703773)
chr2 (32-220)||(28349790-28349977)
chr2 (32-255)||(6477474-6477695)
chr2 (32-220)||(26904031-26904216)
chr2 (32-220)||(43707282-43707464)
chr2 (155-249)||(45617970-45618064)
chr2 (124-217)||(27366880-27366973)
chr2 (33-215)||(42178419-42178601)
chr2 (33-211)||(12636326-12636504)
chr2 (52-214)||(12642119-12642281)
chr2 (122-244)||(19659475-19659596)
chr2 (45-216)||(19358513-19358687)
chr2 (122-210)||(34877461-34877549)
chr2 (52-214)||(3799080-3799242)
chr2 (33-219)||(12727998-12728184)
chr2 (33-219)||(28776269-28776455)
chr2 (122-219)||(16935047-16935144)
chr2 (122-219)||(17005707-17005804)
chr2 (128-244)||(9653597-9653712)
chr2 (33-219)||(11231800-11231986)
chr2 (33-219)||(22513647-22513833)
chr2 (33-219)||(24686243-24686429)
chr2 (33-219)||(34824057-34824243)
chr2 (122-219)||(20273231-20273328)
chr2 (33-211)||(8943466-8943644)
chr2 (156-244)||(21274788-21274875)
chr2 (123-219)||(22283565-22283661)
chr2 (52-219)||(22775650-22775817)
chr2 (52-219)||(22781028-22781195)
chr2 (122-217)||(23822260-23822355)
chr2 (122-217)||(23831339-23831434)
chr2 (122-214)||(36891382-36891474)
chr2 (174-210)||(24383299-24383335)
chr2 (123-219)||(22274332-22274428)
chr2 (122-170)||(24383327-24383375)
[»] chr6 (47 HSPs)
chr6 (32-255)||(24267434-24267656)
chr6 (25-220)||(29847509-29847703)
chr6 (22-220)||(16132653-16132850)
chr6 (32-255)||(5109952-5110174)
chr6 (32-255)||(5289316-5289533)
chr6 (23-220)||(18659059-18659256)
chr6 (32-220)||(19443274-19443461)
chr6 (32-255)||(29415794-29416018)
chr6 (45-209)||(25753072-25753236)
chr6 (45-209)||(25755242-25755406)
chr6 (22-208)||(28948208-28948394)
chr6 (32-220)||(20177618-20177806)
chr6 (32-220)||(22158185-22158373)
chr6 (32-194)||(24441309-24441470)
chr6 (32-217)||(13750516-13750699)
chr6 (55-217)||(18259436-18259598)
chr6 (25-220)||(25347979-25348175)
chr6 (45-217)||(8226984-8227155)
chr6 (33-214)||(16231509-16231690)
chr6 (124-217)||(24563069-24563162)
chr6 (125-217)||(23532219-23532311)
chr6 (69-214)||(18087316-18087461)
chr6 (163-260)||(26089148-26089245)
chr6 (52-214)||(23977386-23977548)
chr6 (54-219)||(16135917-16136082)
chr6 (32-217)||(16448014-16448199)
chr6 (32-169)||(31468017-31468154)
chr6 (55-219)||(19174794-19174957)
chr6 (33-219)||(10488307-10488493)
chr6 (33-219)||(16376835-16377021)
chr6 (33-219)||(16384159-16384345)
chr6 (33-219)||(16649833-16650019)
chr6 (33-219)||(25904753-25904939)
chr6 (156-244)||(15735493-15735580)
chr6 (128-244)||(23994350-23994465)
chr6 (33-219)||(16556603-16556789)
chr6 (33-219)||(16633159-16633345)
chr6 (33-210)||(19983751-19983928)
chr6 (125-219)||(33314761-33314855)
chr6 (128-214)||(18003206-18003292)
chr6 (125-219)||(22226293-22226387)
chr6 (122-218)||(18776608-18776704)
chr6 (33-219)||(35015617-35015803)
chr6 (208-260)||(31468149-31468201)
chr6 (156-211)||(13621374-13621429)
chr6 (142-217)||(25650688-25650763)
chr6 (45-101)||(19102735-19102791)
[»] chr8 (39 HSPs)
chr8 (22-220)||(32950525-32950724)
chr8 (32-255)||(17611528-17611750)
chr8 (32-217)||(23451097-23451284)
chr8 (32-220)||(39694519-39694707)
chr8 (45-222)||(22532386-22532563)
chr8 (45-222)||(22537071-22537248)
chr8 (32-215)||(34302177-34302361)
chr8 (32-217)||(3273513-3273700)
chr8 (32-208)||(24496237-24496415)
chr8 (32-217)||(22583897-22584081)
chr8 (45-188)||(24979771-24979913)
chr8 (69-219)||(17501798-17501948)
chr8 (32-217)||(26220177-26220362)
chr8 (25-220)||(39364396-39364592)
chr8 (33-214)||(13721386-13721567)
chr8 (122-217)||(26222613-26222708)
chr8 (32-220)||(44522418-44522606)
chr8 (124-217)||(30766240-30766333)
chr8 (142-218)||(20481056-20481132)
chr8 (33-219)||(13662726-13662912)
chr8 (52-214)||(16873528-16873690)
chr8 (32-217)||(23889431-23889614)
chr8 (69-219)||(4233514-4233664)
chr8 (33-219)||(643912-644098)
chr8 (125-219)||(271915-272009)
chr8 (125-219)||(829646-829740)
chr8 (123-211)||(3431830-3431918)
chr8 (33-219)||(15319621-15319807)
chr8 (33-219)||(15499990-15500176)
chr8 (69-219)||(22006758-22006908)
chr8 (81-219)||(39114725-39114862)
chr8 (156-215)||(273896-273955)
chr8 (156-215)||(641894-641953)
chr8 (156-215)||(827700-827759)
chr8 (132-210)||(23809455-23809533)
chr8 (123-204)||(24717415-24717496)
chr8 (128-214)||(16039593-16039679)
chr8 (128-212)||(5080846-5080930)
chr8 (156-211)||(24386484-24386539)
[»] chr3 (62 HSPs)
chr3 (22-220)||(18366742-18366938)
chr3 (32-260)||(15517237-15517464)
chr3 (32-255)||(12536240-12536463)
chr3 (23-220)||(178711-178908)
chr3 (32-220)||(13029400-13029587)
chr3 (22-220)||(3393982-3394181)
chr3 (32-220)||(13025808-13025995)
chr3 (32-222)||(37038669-37038859)
chr3 (26-220)||(12276422-12276615)
chr3 (122-255)||(20188314-20188448)
chr3 (123-253)||(23395344-23395474)
chr3 (32-255)||(17547709-17547930)
chr3 (55-255)||(34851562-34851761)
chr3 (32-220)||(42324213-42324400)
chr3 (122-255)||(38167327-38167460)
chr3 (32-243)||(11849835-11850043)
chr3 (22-217)||(14818710-14818905)
chr3 (122-260)||(23491785-23491923)
chr3 (36-217)||(29172095-29172275)
chr3 (32-217)||(37641736-37641921)
chr3 (32-220)||(9511158-9511346)
chr3 (32-220)||(9519133-9519321)
chr3 (32-194)||(24340184-24340345)
chr3 (32-217)||(13511691-13511878)
chr3 (32-217)||(36167156-36167341)
chr3 (32-217)||(52338192-52338376)
chr3 (32-217)||(12158908-12159096)
chr3 (32-216)||(45530844-45531030)
chr3 (22-181)||(52212659-52212818)
chr3 (55-217)||(22147021-22147183)
chr3 (33-214)||(18910610-18910791)
chr3 (124-217)||(13968129-13968222)
chr3 (124-217)||(13973604-13973697)
chr3 (122-217)||(21619007-21619102)
chr3 (39-219)||(50351068-50351248)
chr3 (32-220)||(17513452-17513640)
chr3 (33-210)||(54038740-54038917)
chr3 (122-219)||(28557657-28557754)
chr3 (39-219)||(30206849-30207029)
chr3 (122-217)||(8604463-8604558)
chr3 (33-219)||(16820749-16820935)
chr3 (33-219)||(40039355-40039541)
chr3 (52-219)||(17956463-17956630)
chr3 (128-244)||(53770468-53770583)
chr3 (33-219)||(1468201-1468387)
chr3 (32-217)||(10550929-10551114)
chr3 (52-219)||(16934462-16934629)
chr3 (52-219)||(49232045-49232212)
chr3 (122-217)||(11061707-11061802)
chr3 (122-217)||(17100106-17100201)
chr3 (32-169)||(13667324-13667460)
chr3 (127-210)||(19430553-19430636)
chr3 (128-217)||(11882755-11882844)
chr3 (128-217)||(13327077-13327166)
chr3 (111-174)||(17758767-17758830)
chr3 (111-174)||(19060087-19060150)
chr3 (142-217)||(20417784-20417859)
chr3 (157-218)||(2843646-2843707)
chr3 (133-218)||(3992005-3992090)
chr3 (163-244)||(51961708-51961788)
chr3 (156-244)||(16260889-16260976)
chr3 (156-219)||(12808861-12808924)
[»] scaffold0126 (1 HSPs)
scaffold0126 (23-220)||(6672-6867)
[»] scaffold0004 (4 HSPs)
scaffold0004 (32-260)||(75374-75602)
scaffold0004 (55-255)||(60016-60216)
scaffold0004 (32-260)||(72524-72755)
scaffold0004 (164-244)||(187612-187691)
[»] chr1 (26 HSPs)
chr1 (45-255)||(18270913-18271122)
chr1 (45-255)||(18275567-18275776)
chr1 (32-260)||(7320835-7321062)
chr1 (123-260)||(20058067-20058204)
chr1 (32-255)||(13527952-13528173)
chr1 (23-220)||(21659996-21660192)
chr1 (32-217)||(52983852-52984037)
chr1 (35-220)||(51324127-51324312)
chr1 (32-217)||(18824246-18824430)
chr1 (32-194)||(21473441-21473602)
chr1 (32-220)||(21239286-21239474)
chr1 (32-220)||(20030882-20031070)
chr1 (32-216)||(51476618-51476803)
chr1 (32-172)||(7791798-7791938)
chr1 (33-219)||(18060220-18060406)
chr1 (69-214)||(17148185-17148330)
chr1 (123-219)||(21858901-21858997)
chr1 (125-219)||(17004245-17004339)
chr1 (69-210)||(39060977-39061118)
chr1 (55-219)||(16656271-16656435)
chr1 (128-244)||(20825463-20825578)
chr1 (33-219)||(38055552-38055738)
chr1 (123-219)||(44035523-44035619)
chr1 (137-220)||(7791949-7792032)
chr1 (122-217)||(27330450-27330545)
chr1 (157-212)||(35054239-35054294)
[»] scaffold0181 (1 HSPs)
scaffold0181 (26-226)||(25752-25952)
[»] scaffold0273 (1 HSPs)
scaffold0273 (22-218)||(7304-7500)
[»] scaffold0447 (4 HSPs)
scaffold0447 (25-220)||(7476-7670)
scaffold0447 (25-220)||(12090-12284)
scaffold0447 (122-260)||(3978-4116)
scaffold0447 (122-260)||(8592-8730)
[»] scaffold0383 (2 HSPs)
scaffold0383 (25-220)||(10085-10279)
scaffold0383 (122-260)||(6586-6724)
[»] scaffold0962 (1 HSPs)
scaffold0962 (22-217)||(843-1038)
[»] scaffold0042 (1 HSPs)
scaffold0042 (32-220)||(51831-52018)
[»] chr4 (41 HSPs)
chr4 (32-243)||(14931364-14931573)
chr4 (25-220)||(10705357-10705551)
chr4 (25-220)||(10919127-10919321)
chr4 (32-220)||(15990891-15991078)
chr4 (22-255)||(2584376-2584607)
chr4 (22-255)||(4830389-4830620)
chr4 (22-255)||(4833684-4833915)
chr4 (32-220)||(9870687-9870875)
chr4 (55-242)||(13447132-13447319)
chr4 (32-211)||(6512256-6512434)
chr4 (32-253)||(18230331-18230551)
chr4 (92-210)||(15214108-15214226)
chr4 (33-219)||(5682987-5683173)
chr4 (30-194)||(15368180-15368343)
chr4 (45-217)||(22354305-22354476)
chr4 (122-226)||(4615381-4615485)
chr4 (32-217)||(14280875-14281060)
chr4 (32-216)||(16224007-16224190)
chr4 (32-220)||(3337994-3338182)
chr4 (122-217)||(54798236-54798331)
chr4 (32-217)||(15373958-15374142)
chr4 (32-217)||(20898987-20899171)
chr4 (69-214)||(7132559-7132704)
chr4 (124-217)||(16157422-16157515)
chr4 (52-214)||(20000340-20000502)
chr4 (55-217)||(27028376-27028535)
chr4 (32-170)||(15371712-15371850)
chr4 (33-219)||(18168580-18168766)
chr4 (125-219)||(18293412-18293506)
chr4 (122-244)||(30233215-30233336)
chr4 (54-219)||(54363742-54363907)
chr4 (81-203)||(45314379-45314500)
chr4 (123-194)||(15403193-15403263)
chr4 (122-217)||(52266227-52266322)
chr4 (122-210)||(13043296-13043384)
chr4 (125-219)||(25119760-25119854)
chr4 (130-212)||(26921804-26921886)
chr4 (173-217)||(8574316-8574360)
chr4 (123-217)||(15852063-15852157)
chr4 (55-100)||(16157538-16157583)
chr4 (58-201)||(19622549-19622693)
[»] scaffold0123 (2 HSPs)
scaffold0123 (32-220)||(6898-7086)
scaffold0123 (55-244)||(1530-1717)
[»] chr5 (33 HSPs)
chr5 (32-243)||(8952278-8952487)
chr5 (32-255)||(22357141-22357362)
chr5 (32-225)||(21311139-21311332)
chr5 (22-255)||(23539355-23539586)
chr5 (32-255)||(10817399-10817621)
chr5 (32-225)||(21297596-21297789)
chr5 (45-238)||(22777320-22777512)
chr5 (32-220)||(22470453-22470640)
chr5 (123-260)||(21405937-21406074)
chr5 (45-217)||(40726317-40726488)
chr5 (124-217)||(22007217-22007310)
chr5 (125-217)||(18318537-18318629)
chr5 (122-217)||(20765583-20765678)
chr5 (33-219)||(10778428-10778614)
chr5 (53-210)||(21399063-21399220)
chr5 (123-219)||(1220070-1220166)
chr5 (123-211)||(9730932-9731020)
chr5 (111-219)||(20197656-20197764)
chr5 (33-219)||(22883546-22883732)
chr5 (125-219)||(35581643-35581737)
chr5 (125-219)||(36990325-36990419)
chr5 (55-219)||(28901824-28901988)
chr5 (55-219)||(28938219-28938383)
chr5 (33-219)||(21932843-21933029)
chr5 (33-219)||(21939013-21939199)
chr5 (128-214)||(21204384-21204470)
chr5 (123-209)||(23514179-23514265)
chr5 (32-97)||(21405870-21405935)
chr5 (122-217)||(21109349-21109444)
chr5 (133-199)||(432105-432171)
chr5 (157-215)||(21650155-21650213)
chr5 (122-211)||(20711537-20711626)
chr5 (128-217)||(22111598-22111687)
[»] scaffold0429 (1 HSPs)
scaffold0429 (22-243)||(2227-2447)
[»] scaffold0021 (2 HSPs)
scaffold0021 (22-255)||(147212-147443)
scaffold0021 (122-215)||(87752-87845)
[»] scaffold0025 (1 HSPs)
scaffold0025 (122-255)||(146015-146148)
[»] scaffold0825 (1 HSPs)
scaffold0825 (32-220)||(626-814)
[»] scaffold0377 (1 HSPs)
scaffold0377 (32-217)||(16340-16526)
[»] scaffold0083 (3 HSPs)
scaffold0083 (32-220)||(10995-11184)
scaffold0083 (32-219)||(5277-5464)
scaffold0083 (60-219)||(1-160)
[»] scaffold0453 (1 HSPs)
scaffold0453 (22-244)||(3716-3937)
[»] scaffold0234 (1 HSPs)
scaffold0234 (142-255)||(18117-18230)
[»] scaffold0149 (1 HSPs)
scaffold0149 (32-216)||(35781-35964)
[»] scaffold1276 (1 HSPs)
scaffold1276 (56-255)||(729-928)
[»] scaffold0174 (3 HSPs)
scaffold0174 (144-260)||(15991-16107)
scaffold0174 (191-255)||(4944-5008)
scaffold0174 (191-253)||(11066-11128)
[»] scaffold0342 (2 HSPs)
scaffold0342 (133-260)||(5352-5479)
scaffold0342 (123-219)||(1000-1096)
[»] scaffold0003 (1 HSPs)
scaffold0003 (156-260)||(146982-147086)
[»] scaffold0017 (3 HSPs)
scaffold0017 (32-217)||(751-938)
scaffold0017 (122-217)||(7593-7688)
scaffold0017 (122-220)||(26364-26462)
[»] scaffold0244 (1 HSPs)
scaffold0244 (128-260)||(23216-23348)
[»] scaffold0113 (1 HSPs)
scaffold0113 (45-220)||(35113-35288)
[»] scaffold0303 (1 HSPs)
scaffold0303 (122-260)||(705-843)
[»] scaffold0371 (1 HSPs)
scaffold0371 (32-217)||(3503-3690)
[»] scaffold0256 (1 HSPs)
scaffold0256 (32-203)||(2085-2256)
[»] scaffold2046 (1 HSPs)
scaffold2046 (32-217)||(817-1000)
[»] scaffold0175 (2 HSPs)
scaffold0175 (32-217)||(18474-18658)
scaffold0175 (156-214)||(14410-14468)
[»] scaffold1957 (1 HSPs)
scaffold1957 (122-260)||(143-273)
[»] scaffold0706 (1 HSPs)
scaffold0706 (128-260)||(7250-7382)
[»] scaffold0521 (1 HSPs)
scaffold0521 (53-219)||(8379-8545)
[»] scaffold0720 (1 HSPs)
scaffold0720 (32-217)||(682-866)
[»] scaffold0077 (2 HSPs)
scaffold0077 (176-253)||(14741-14818)
scaffold0077 (122-174)||(16171-16223)
[»] scaffold0037 (4 HSPs)
scaffold0037 (128-253)||(94393-94518)
scaffold0037 (32-214)||(113209-113391)
scaffold0037 (45-244)||(118056-118254)
scaffold0037 (157-215)||(25433-25491)
[»] scaffold0107 (2 HSPs)
scaffold0107 (32-217)||(3519-3703)
scaffold0107 (33-219)||(30917-31103)
[»] scaffold0309 (3 HSPs)
scaffold0309 (124-217)||(8765-8858)
scaffold0309 (163-217)||(6613-6667)
scaffold0309 (55-100)||(8881-8926)
[»] scaffold0331 (1 HSPs)
scaffold0331 (32-217)||(4333-4514)
[»] scaffold0008 (1 HSPs)
scaffold0008 (122-217)||(72283-72378)
[»] scaffold0247 (1 HSPs)
scaffold0247 (55-217)||(17511-17672)
[»] scaffold0490 (2 HSPs)
scaffold0490 (124-217)||(5510-5603)
scaffold0490 (55-100)||(5626-5671)
[»] scaffold0686 (1 HSPs)
scaffold0686 (124-219)||(6635-6730)
[»] scaffold0106 (1 HSPs)
scaffold0106 (45-220)||(21606-21781)
[»] scaffold0080 (2 HSPs)
scaffold0080 (32-220)||(29605-29793)
scaffold0080 (32-220)||(35070-35258)
[»] scaffold0047 (1 HSPs)
scaffold0047 (122-244)||(76788-76909)
[»] scaffold0034 (3 HSPs)
scaffold0034 (33-210)||(79321-79498)
scaffold0034 (123-219)||(40134-40230)
scaffold0034 (123-219)||(45617-45713)
[»] scaffold0574 (1 HSPs)
scaffold0574 (128-244)||(10219-10334)
[»] scaffold0269 (1 HSPs)
scaffold0269 (123-219)||(16068-16164)
[»] scaffold0251 (1 HSPs)
scaffold0251 (128-244)||(14099-14214)
[»] scaffold0039 (1 HSPs)
scaffold0039 (123-219)||(19609-19705)
[»] scaffold0016 (1 HSPs)
scaffold0016 (123-219)||(166794-166890)
[»] scaffold0076 (1 HSPs)
scaffold0076 (33-219)||(38711-38897)
[»] scaffold0023 (1 HSPs)
scaffold0023 (33-219)||(154468-154654)
[»] scaffold0022 (1 HSPs)
scaffold0022 (122-217)||(117054-117149)
[»] scaffold0452 (1 HSPs)
scaffold0452 (71-219)||(3253-3401)
[»] scaffold0184 (1 HSPs)
scaffold0184 (123-219)||(31830-31926)
[»] scaffold0078 (1 HSPs)
scaffold0078 (123-219)||(40918-41014)
[»] scaffold0125 (1 HSPs)
scaffold0125 (53-219)||(28173-28339)
[»] scaffold0597 (1 HSPs)
scaffold0597 (157-218)||(1719-1780)
[»] scaffold0032 (1 HSPs)
scaffold0032 (133-218)||(55034-55119)
[»] scaffold0409 (2 HSPs)
scaffold0409 (52-219)||(1788-1954)
scaffold0409 (52-219)||(10043-10209)
[»] scaffold0456 (2 HSPs)
scaffold0456 (33-168)||(1990-2125)
scaffold0456 (33-168)||(9135-9270)
[»] scaffold0103 (1 HSPs)
scaffold0103 (123-210)||(33125-33212)
[»] scaffold0465 (1 HSPs)
scaffold0465 (128-215)||(10676-10763)
[»] scaffold0261 (1 HSPs)
scaffold0261 (142-217)||(6728-6803)
[»] scaffold0964 (1 HSPs)
scaffold0964 (157-193)||(1740-1776)


Alignment Details
Target: scaffold0117 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 25955 - 25717
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||  ||||||| |      
T  25955 gaatttacgcttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatttt 25857  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     || |||| ||||||||||| |||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  25856 tctatagaatatgatagagctaagtgtcaggagcgtgtaggcgaaaacggtatcgaaaacgggttaatggtttggattttacgcacgaaaaagtgaaaat 25757  T
Q  221 tggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    ||||||| ||||| ||||||||||| ||||||||| ||||    
T  25756 tggaaaatctgttattgtctgtcagacagaaatcggacta 25717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 40464 - 40636
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 143  Q
    |||||||||||| |||||| ||| ||||||||||||||| | ||||||||||||||| || |||  |||||||  |   |||||||||||||||||| ||    
T  40464 gtctaaacgtttatgcaaataagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagagctaa 40562  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  40563 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 40636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 40554745 - 40554942
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||  |||||||||||    
T  40554745 gaatttatgcttgaaaagtcggagtttaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttt-ggggtggttgagacttgaaatag 40554843  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| | | ||||||||||| |||||||| ||||||  ||||||||    
T  40554844 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacagcatcaaaatccgattaacggtttgaattttacgtgcgaaatggtgaaaat 40554942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 8756378 - 8756574
Alignment:
Q  23 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 122  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||  |||||||||| |    
T  8756378 aatttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttt-ggggtggttgagacttgaaataac 8756476  T
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    | ||| |||||||||||||||||||||||| |||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  8756477 tataggttatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 8756574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 13898285 - 13898098
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||  |||||||||| || |||  |||||||||||||||||||||    
T  13898285 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttggaaaaatgatttttgggatggttgagacttgaaatagctgtagatta 13898187  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||   | ||||||||| | |||||||||||||||  ||||||||    
T  13898186 tgatagagccaagtgtcaggagagtgtaggagaaaacggcatcaaaattcgattaacggttggaattttacgcgcgaaatggtgaaaat 13898098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 255
Target Start/End: Complemental strand, 13256503 - 13256281
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  | |||||||||||| || || |||  ||||||| |   |||||||||    
T  13256503 ttgaaaactcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaatcgattttttgg-tggttgaaacttgaatttttctgtagatt 13256406  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  13256405 atgatagagctaagtgtcaggagcgtgtaggcgaaaacaacatcgaaaacgggttaacggtttagattttacgcgcgaaaacgtgaaaattagaaaatct 13256306  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||  ||||||||||    
T  13256305 gatgttgtctgtcgagcagaaatcg 13256281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 17467713 - 17467834
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17467713 ctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 17467812  T
Q  222 ggaaaaactgttgttgtctgtc 243  Q
     ||||| ||| |||||||||||    
T  17467813 agaaaatctgatgttgtctgtc 17467834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 17585501 - 17585380
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17585501 ctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 17585402  T
Q  222 ggaaaaactgttgttgtctgtc 243  Q
     ||||| ||| |||||||||||    
T  17585401 agaaaatctgatgttgtctgtc 17585380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 222
Target Start/End: Original strand, 13698880 - 13699070
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||| |  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||||| |||||||||    
T  13698880 ttgaaaagtaggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaatagttgtagatta 13698979  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||| |   ||||||||||| ||||||||| |||||  ||||||||||    
T  13698980 tgatagcgccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttacgcacgaaatggtgaaaattg 13699070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 3049136 - 3048995
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||||||  |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  3049136 ctgtacattaagatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggtttttactcgcgaaaacgtgaaaatt 3049037  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtactatga 263  Q
    |||||| ||| ||||||||||||| |||||||||| ||||||    
T  3049036 ggaaaatctgatgttgtctgtcagacagaaatcgtgctatga 3048995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 37380602 - 37380469
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37380602 ctgtagattatgatagagctaagtgtcaggagcgcgtaggcgaaaacgacattgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 37380503  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
     ||||| ||| |||||||||||  ||||||||||    
T  37380502 agaaaatctgatgttgtctgtcgagcagaaatcg 37380469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 13866472 - 13866599
Alignment:
Q  133 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgt 232  Q
    |||||||| |||||||||||  ||||||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||     
T  13866472 gatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacagtttaacggtttggtttttacgcgcgaaaacgtgaaaattggaaaatctga 13866571  T
Q  233 tgttgtctgtcaggcagaaatcgtacta 260  Q
    ||| ||||||||||||||||||| ||||    
T  13866572 tgtggtctgtcaggcagaaatcggacta 13866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 3288990 - 3289193
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-ta 120  Q
    ||||||||| |||||||||||  |||  |||| ||||||||| ||| ||||||||||||||  |||||||||||||| ||||| |||  |||||||| |     
T  3288990 gaatttatgtttgaaaagtcggtgtc-caacg-ttttgcaaataagtgattatgtgaggttctgaaaatcgattttt-gggtggttgaaacttgaaattt 3289086  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||  ||||||||||| ||||||||| |||||| |    
T  3289087 tctgtagattatgatagagctaagtgtcaggaacgtgtaggcaaaaacggcatcgaaaatgggttaacaatttggattttatgcgcgaaaatgtgaaagt 3289186  T
Q  221 tggaaaa 227  Q
    | |||||    
T  3289187 tagaaaa 3289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 19486204 - 19486389
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||| |||||  |||||||||||| |||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||    
T  19486204 ttgaatagtcggcgtctaaacgtttctgcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagatt 19486302  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||||||    
T  19486303 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggattggtttttatgagcgaaaacgtgaa 19486389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 210
Target Start/End: Complemental strand, 28720503 - 28720332
Alignment:
Q  39 gtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatag 137  Q
    ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||  ||||||||||||||||    
T  28720503 gtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gattcttgggatggttgagacttgaaatttctgtagattatgatag 28720405  T
Q  138 agccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    |||||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||    
T  28720404 agccaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaa 28720332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 244
Target Start/End: Complemental strand, 11054523 - 11054311
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg-gggtgattgtcacttgaaatag-ctgtagat 129  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||  ||||| |||  ||||||| |   || || ||    
T  11054523 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaa-tcgatttttttgggtggttgaaacttgaatttttctatatat 11054425  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaac 229  Q
    |||||||| || ||||||||||||  | |||| |||||||||||||||||| | |||||||||||  ||||| |||||||||||||||  || ||||| |    
T  11054424 tatgatagggctaagtgtcaggaacatataggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgtgaaggtt-gaaaatc 11054326  T
Q  230 tgttgttgtctgtca 244  Q
    || ||||||||||||    
T  11054325 tgatgttgtctgtca 11054311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 33001960 - 33001787
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 144  Q
    |||||||||||||| |||| ||| ||||||||||||||||| |||   ||| ||||| || |||  |||||||||  || |||||||||||||||||  |    
T  33001960 gtctaaacgtttttacaaataagggattatgtgaggtttgggaaaataattcttgggatggttgagacttgaaatttctatagattatgatagagcc--g 33001863  T
Q  145 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||| ||||||||||||||||||||| ||| | | ||||||| ||| |||||||||||||||  ||||||||    
T  33001862 tgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggcttgaattttacgcgcgaaatggtgaaaat 33001787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 48274293 - 48274108
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||| |||||  |||||||  ||||||||||  || ||||||||||||||| | ||| ||||||||||| || |||  ||| ||| |   |||||||||    
T  48274293 ttgaagagtcggtgtctaaatatttttgcaaatgagtgattatgtgaggttttggaaaccgatttttggg-tggttgaaactggaatttttctgtagatt 48274195  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||| | |||||||||  | ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  48274194 gtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaatggtttggtttttaggcgcgaaaacgtgaa 48274108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 4280843 - 4280750
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  4280843 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaaacgtgaa 4280750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 21734752 - 21734841
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacg 213  Q
    ||||||||||||||||| |||| ||||||  || |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  21734752 gtagattatgatagagctaagtctcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgtgaaaacg 21734841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 29004881 - 29004694
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttg--gaaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  ||||||||||||  ||||| |||||| |||||||||||||  |||||| ||  |||||| || |||  ||||||||| | |||||||    
T  29004881 ttgaaaagtcggtgtctaaacgttt--gcaaataagagactatgtgaggtttgaggaaaat-gacctttgggatggttgagacttgaaattgttgtagat 29004785  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || |||||||| |||||| ||||  |||||||||||||||||| | ||| | | ||||||||||| ||||| |||||||||  ||||||||    
T  29004784 taagatagagcaaagtgttaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggtttgaatttttcgcgcgaaatggtgaaaat 29004694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 370795 - 370704
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||||||||||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  370795 tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 370704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 13758149 - 13757987
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  13758149 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 13758051  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  13758050 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 13757987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 10063210 - 10063304
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||| ||||||||| |||||||||||  | ||||| |||||||||||||||||||||||||||||| |  ||||| |||||||||||||||    
T  10063210 tgtagattgtgatagagctaagtgtcaggagtgcgtaggtgaaaacggcatcgaaaacgggttaacggttcgatttttaggcgcgaaaacgtgaa 10063304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 14251392 - 14251537
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||| |||| ||||||||| ||||   ||||||||||||    
T  14251392 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattataatagtgccaagtgttaggagcatgtaggcgaaaa 14251490  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  14251491 cggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 14251537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 48744351 - 48744153
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagct 123  Q
    |||||| ||||||||||| |||||||||||| ||||||| |||||| |||||||| ||| || |||  |||  ||||| || |||  ||||||||| | |    
T  48744351 tttatgcttgaaaagtcggagtctaaacgttcttgcaaataagagactatgtgagttttagggaaaaagatccttgggatggttgagacttgaaattgtt 48744252  T
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    |||||||| |||||||| || ||||||||  |||||||||||||||||| | |||   | |||||| || | |||||||| ||||||  ||||||||||    
T  48744251 gtagattaagatagagctaactgtcaggagcgtgtaggcgaaaacggcaccaaaattcgattaacgattggaattttacgtgcgaaatggtgaaaattg 48744153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 21734192 - 21734269
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggatttta 201  Q
    ||||||||||||||||| |||| ||||||  || |||||||||||||||||||||||||||||||||||||| |||||    
T  21734192 gtagattatgatagagctaagtctcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggttttta 21734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 32494754 - 32494850
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||| ||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  32494754 tgtagattatgttagagtcaagtgtcatgagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 32494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 7822522 - 7822336
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  7822522 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 7822424  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  7822423 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 7822336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 7829833 - 7829647
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  7829833 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 7829735  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  7829734 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 7829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 27102099 - 27102285
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  27102099 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 27102197  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  27102198 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 27102285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 27109447 - 27109633
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  27109447 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 27109545  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  27109546 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 27109633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 27176227 - 27176041
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  27176227 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 27176129  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  27176128 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 27176041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 37784686 - 37784781
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||||||| || ||||||||||||  |||||| |||||||||||||||||| | |||||||||||  ||||| | ||||||| |||||    
T  37784686 ctgtagattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgagcgaaaatgtgaa 37784781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 38784191 - 38784377
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  38784191 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 38784289  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  38784290 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 38784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 15951249 - 15951435
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| | ||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  15951249 tgaaatgtcgatgtttaagcgttttcgccaataagtgcttatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 15951347  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||  ||||||||||||||| |||| ||| | | ||||||||||| |||||||| ||||||  |||||||    
T  15951348 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgtgcgaaatggtgaaaa 15951435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 16383519 - 16383369
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| |||||||||| || |||  |||| ||||   |||||||||||||||||   ||||| ||||| |||||||||||||    
T  16383519 gattatgtgaggttttggaaaat-gatttttgggatggttgaaactttaaatttttgtagattatgatagagtttagtgttaggaacgtgtaggcgaaaa 16383421  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || |||| ||| | | |||| |||||| |||||| ||||||||  |||||||    
T  16383420 cgacatcaaaatccgattaatggtttgaattttatgcgcgaaatggtgaaaa 16383369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 2190888 - 2190974
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||  |||||||||||  ||||| ||||||||||||    
T  2190888 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacgaattaacggtttgatttttatgcgcgaaaacgt 2190974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 15927276 - 15927186
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa-cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaac 212  Q
    ||||||||||||||| ||||||| | ||||   |||||||||||| ||||||||||||||| |||||||||||  ||||| ||||||||||    
T  15927276 tgtagattatgatagtgccaagtattaggagcatgtaggcgaaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaac 15927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 18980514 - 18980659
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   |||||| |||||    
T  18980514 gattatgtgaggttttggaaaat-gacttttgggatggttggaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggtgaaaa 18980612  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    | |||||||||| || |||||||||||  ||| | ||||||||||||    
T  18980613 ctgcatcgaaaatggattaacggtttgattttaatgcgcgaaaacgt 18980659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 42057002 - 42057117
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   |||||| ||||||| |||||||||||| |||||||||||  ||||| |||||||||||| | || | |||||    
T  42057002 attatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaa 42057100  T
Q  228 actgttgttgtctgtca 244  Q
     ||| ||||||||||||    
T  42057101 tctgatgttgtctgtca 42057117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 3170749 - 3170836
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    |||||| | ||||||||| |||| | ||||| |||||||||||||| | ||||||||||  ||||| ||||| |||||||||||||||    
T  3170749 tgtagaatgtgatagagctaagtttaaggaacgtgtaggcgaaaacagaatcgaaaacgaattaacagtttgaattttacgcgcgaaa 3170836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 3894550 - 3894492
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  3894550 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 3894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 15525278 - 15525364
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||||||||  | |||||| |||| | |||||||||||||||||| | |||||| |||||||||||  ||||| ||||||||||||    
T  15525278 attatgatagtactaagtgttaggagaatgtaggcgaaaacggcattgcaaacggattaacggtttgatttttatgcgcgaaaacgt 15525364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 2028435 - 2028378
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||| |||||||||||||||||| | |||||||||||  ||||| ||||||||||||    
T  2028435 gtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgt 2028378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 10063143 - 10063208
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttt 97  Q
    ||||| |||||| ||||||| |||||||||||  || ||||||||||||||| ||||| |||||||    
T  10063143 ttgaagagtcgatgtctaaatgtttttgcaaatgagtgattatgtgaggttttgaaaaccgatttt 10063208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 25123965 - 25123885
Alignment:
Q  163 gaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
    ||||||||| |||||||||| |||||||||||  ||||| |||||||||||| | || | ||||| ||| ||||||||||||    
T  25123965 gaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaatctgatgttgtctgtca 25123885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 26070962 - 26071054
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||| |||| ||||| || |||||||| |||   ||||| ||||| |||||||||||| | |||||||||||  ||||| ||||||||||||    
T  26070962 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgt 26071054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 26094749 - 26094841
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||| |||| ||||| || |||||||| |||   ||||| ||||| |||||||||||| | |||||||||||  ||||| ||||||||||||    
T  26094749 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgt 26094841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 112008 - 112066
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    ||||| ||||||||||| |||||||| |||||||||||  | ||| |||||||||||||    
T  112008 gtaggtgaaaacggcattgaaaacggattaacggtttgattattatgcgcgaaaacgtg 112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 21245505 - 21245307
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  | |||||||||    
T  21245505 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttttggggtggttgagaattgaaatag 21245406  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||| | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  21245405 ctatagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 21245307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 24273262 - 24273460
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||  |||||||||||    
T  24273262 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggggaatcgatttttggggtgtttgagacttgaaatag 24273361  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| | | ||||||||| | ||||||||| |||||  ||||||||    
T  24273362 ctgtagattatgatagagccaagtgtcagaagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcacgaaatggtgaaaat 24273460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 24087809 - 24088036
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||| ||||||||||||||| | |||| ||||||||||  | |||  |||||||  |  |||||||||    
T  24087809 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaatagatttttgggtag-ttgaaacttgaatgtttctgtagatt 24087906  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||    
T  24087907 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttgacgatttggattttacgcgcgaaaacgtgaaaattggaaaatct 24088006  T
Q  231 gttgttgtctgtcaggcagaaatcgtacta 260  Q
      ||||||||||||||||||||||| ||||    
T  24088007 tatgttgtctgtcaggcagaaatcggacta 24088036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 260
Target Start/End: Complemental strand, 22703773 - 22703559
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||| ||||||||||||||  | ||||||||||||||| || |||  ||||||| |   ||||||||||||||||||| ||    
T  22703773 gtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaa 22703676  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 243  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||    
T  22703675 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaacgatttggattttacgcgcgaaaacgtgaagattagaaaatctgatgttgtctgtc 22703576  T
Q  244 aggcagaaatcgtacta 260  Q
      |||||||||| ||||    
T  22703575 gagcagaaatcggacta 22703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 28349977 - 28349790
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||| | |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||| |||||||||    
T  28349977 ttgaaaagtcgaaatataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagttgtagatta 28349879  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||| | |||||| ||||||||  ||||||||    
T  28349878 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttatgcgcgaaatggtgaaaat 28349790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 6477474 - 6477695
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||  ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   ||||||||     
T  6477474 ttgaaaagtcggtgtctaaacgttt--gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagata 6477570  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    ||||||  || |||||||||||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || ||||| ||    
T  6477571 atgataaggctaagtgtcaggagcgtgtaggcgaaaacggcatcaaaaatgggttaacggtttggattttacgcgcgaaaacgtgaaagttagaaaatct 6477670  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||| ||||  ||||||||||    
T  6477671 gatgttgtttgtcgagcagaaatcg 6477695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 26904216 - 26904031
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||   ||||||||| || |||  ||||||||||||||||| |||    
T  26904216 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaataatttttgggatggttgagacttgaaatagctgtaggtta 26904118  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||    ||||||||| | |||||||||||||||  ||||||||    
T  26904117 tgatagagccaagtgtcagg-gagtgtaggcgaaaacggcatc-aaaatccattaacggttggaattttacgcgcgaaatggtgaaaat 26904031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 43707282 - 43707464
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||| ||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||| | |||||||||||    
T  43707282 ttgaaaggtcggtgtctaaacgtttttgcaaataagtgattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaatttgctgtagatta 43707381  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     |||||||||||||||||| |  ||||||||||||||| |||| ||      ||||||||||| |||||||||||||||  ||||||||    
T  43707382 agatagagccaagtgtcagaagcgtgtaggcgaaaacgacatcaaa------ttaacggtttgaattttacgcgcgaaatggtgaaaat 43707464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 45617970 - 45618064
Alignment:
Q  155 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcag 249  Q
    ||||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||    
T  45617970 gtgtaggcgaaaacggcgtcgaaaacagattaacagtttggattttacgcgcgaaaacgtgaaaattggaaaatctgatcttatctgtcaggcag 45618064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 27366880 - 27366973
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  27366880 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaaacgtgaa 27366973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 215
Target Start/End: Original strand, 42178419 - 42178601
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| |||||||||| |||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  42178419 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgatgttttggaaaat-gacttttgggatggttgaaacatgaaattcttgtagatta 42178517  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  42178518 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 42178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 12636326 - 12636504
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  12636326 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 12636424  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    |||||| ||||||||| ||||   |||||||| |||||||||||||||||| |||||||||||  ||||| |||||||||    
T  12636425 tgatagtgccaagtgttaggagcatgtaggcggaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaa 12636504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 12642119 - 12642281
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  12642119 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 12642217  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  12642218 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 12642281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 244
Target Start/End: Complemental strand, 19659596 - 19659475
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||||||||| || ||||||||||||  |||||| |||||||||||||||||| | |||||||||||  ||||| ||||||||||||| || ||    
T  19659596 ctgtacattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgtg-aagtt 19659498  T
Q  222 ggaaaaactgttgttgtctgtca 244  Q
     ||||| ||| ||||||||||||    
T  19659497 tgaaaatctgatgttgtctgtca 19659475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 19358687 - 19358513
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg---gggtgattgtcacttgaaatag-ctgtagattatgatagagc 140  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||    ||||| |||  ||||||| |   ||||| ||||||||||||     
T  19358687 gtctaaacgtttttgcaaataagggattatgtgaggtttggaaa-tcgatttttttttgggtggttgaaacttgaatttttctgtatattatgatagagt 19358589  T
Q  141 caagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtga 216  Q
     ||||||||||||  |||||| ||||||  |||||||||| | |||||||||||  ||||| | ||||||||||||    
T  19358588 taagtgtcaggaacatgtaggtgaaaacaacatcgaaaacagattaacggtttgatttttatgagcgaaaacgtga 19358513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 34877549 - 34877461
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    ||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||||||| | |||| |||||| |||||||||||||||    
T  34877549 ctgtagaatatgatagagctaagtgtcaggagcgtgttggcgaaaacggcatcgaaaacagattaatggtttgaattttacgcgcgaaa 34877461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 3799080 - 3799242
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| | |||||||| ||||||||| ||    
T  3799080 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaaatatgatagtgccaagtgttag 3799178  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  3799179 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 3799242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 12728184 - 12727998
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || ||   || ||||||   ||||||| |    
T  12728184 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttaaaacatgaaatttttgtagatca 12728086  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  12728085 tgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 12727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 28776269 - 28776455
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  28776269 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 28776367  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  28776368 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaa 28776455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 16935144 - 16935047
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||| || ||| | | ||||||||||| |||||| ||||||||  |||||||    
T  16935144 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 16935047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 17005804 - 17005707
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||| || ||| | | ||||||||||| |||||| ||||||||  |||||||    
T  17005804 ctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 17005707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 9653597 - 9653712
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||| |||||| | |||||||| |||   ||||| ||||||| |||||||||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  9653597 attaagatagaactaagtgtcatgaacacgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttacgcgcgaaaacgtg-aaattggaaaa 9653695  T
Q  228 actgttgttgtctgtca 244  Q
     |||  |||||||||||    
T  9653696 tctggcgttgtctgtca 9653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 11231800 - 11231986
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  11231800 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 11231898  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  11231899 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 11231986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 22513647 - 22513833
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  22513647 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 22513745  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  22513746 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 22513833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 24686243 - 24686429
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||  || |||  || ||||||   | |||||||    
T  24686243 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttggaatggttgaaacatgaaatttttatagatta 24686341  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  24686342 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 24686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 34824243 - 34824057
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| |||||||| |||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  34824243 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtaaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 34824145  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  |||||||||||||||||||| ||| |   ||||||||||| |||||||||||||||  |||||||    
T  34824144 tgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttacgcgcgaaatggtgaaaa 34824057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 20273328 - 20273231
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    |||||| |||||||||||  |||||||||||  | ||||||||||||  ||| ||||||||||||| |||||| |||||||||||||||  |||||||    
T  20273328 ctgtaggttatgatagagttaagtgtcaggagcgcgtaggcgaaaacaacattgaaaacgggttaatggtttgaattttacgcgcgaaatggtgaaaa 20273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 8943644 - 8943466
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  8943644 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 8943546  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    |||||| ||||||||| ||||   |||||||| ||||| ||||||||| ||  ||||||||||  ||||| |||||||||    
T  8943545 tgatagtgccaagtgttaggagcatgtaggcggaaacgacatcgaaaatggagtaacggtttgatttttatgcgcgaaaa 8943466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 21274788 - 21274875
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
    |||||||||||||||||||||||| || |||||||||||  ||||| |||||||||||| | || | ||||| ||| ||||||||||||    
T  21274788 tgtaggcgaaaacggcatcgaaaatggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaatctgatgttgtctgtca 21274875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 22283661 - 22283565
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| |||||||| |||  || ||||||||||||||||| ||| | | ||||||||||  |||||||||||||||  |||||||    
T  22283661 tgtagattatgttagagtcaagtgtccggagcgtataggcgaaaacggcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaa 22283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 22775650 - 22775817
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| |||||||||| || |||  || || |||  |||||||||||  |||||  |||||||||    
T  22775650 cgttttcgccaataagtgattatgtgaggtttcggaaaat-gatttttgggatggttgaaacatggaatttctgtagattatcttagagttaagtgtcag 22775748  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  |||||||||||||||||||| |||   | |||| |||||| ||| |||||||||||  |||||||    
T  22775749 gagcgtgtaggcgaaaacggcatcaaaattcgattaatggtttgaattatacgcgcgaaatggtgaaaa 22775817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 22781028 - 22781195
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| |||||||||| || |||  || || |||  |||||||||||  |||||  |||||||||    
T  22781028 cgttttcgccaataagtgattatgtgaggtttcggaaaat-gatttttgggatggttgaaacatggaatttctgtagattatcttagagttaagtgtcag 22781126  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  |||||||||||||||||||| |||   | |||| |||||| ||| |||||||||||  |||||||    
T  22781127 gagcgtgtaggcgaaaacggcatcaaaattcgattaatggtttgaattatacgcgcgaaatggtgaaaa 22781195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 23822260 - 23822355
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||||||||  | ||| || ||||||||||||    
T  23822260 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattgttatgctcgaaaacgtgaa 23822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 23831339 - 23831434
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||||||||  | ||| || ||||||||||||    
T  23831339 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgattgttatgctcgaaaacgtgaa 23831434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 36891382 - 36891474
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||| |||| ||||| || |||||||| |||   ||||| ||||||||||||||||| || |||||||||||  ||||| ||||||||||||    
T  36891382 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaatggattaacggtttgagttttatgcgcgaaaacgt 36891474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 24383335 - 24383299
Alignment:
Q  174 cgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    ||||||||||||||||||||| |||||||||||||||    
T  24383335 cgaaaacgggttaacggtttgaattttacgcgcgaaa 24383299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 22274428 - 22274332
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| || || |||| ||| |||  || ||||||||||| ||||| ||| | | ||||||||||| |||||||||| ||||  |||||||    
T  22274428 tgtagattatgttacagtcaagggtccggagcgtataggcgaaaacagcatcaaaatccgattaacggtttgaattttacgcgtgaaatggtgaaaa 22274332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 24383375 - 24383327
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacgg 170  Q
    ||||||| ||||||||||| |||||| ||||  ||||||||||||||||    
T  24383375 ctgtagaatatgatagagctaagtgttaggagcgtgtaggcgaaaacgg 24383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 32 - 255
Target Start/End: Complemental strand, 24267656 - 24267434
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||  || |||  ||||||| |   |||||||||    
T  24267656 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatgtttggc-tggttgaaacttgaatttttctgtagatt 24267559  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24267558 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaatct 24267459  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||| ||||||  ||||||||||    
T  24267458 gatgttatctgtcgagcagaaatcg 24267434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 29847509 - 29847703
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 124  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||  ||||||||||| ||    
T  29847509 tttatgcttgaaaagtcggagtctaaacatttttgcaaacaagagattatgtgaggtttgggaaatcgatttt-ggggtggttgagacttgaaatagttg 29847607  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  29847608 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 29847703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 16132653 - 16132850
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||  |||| ||||||    
T  16132653 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggggaatcgatttttggggtggttgagacttaaaatag 16132752  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||| | | ||||||| ||||| |||||||||||||  ||||||||    
T  16132753 ctgtagattatgatagagccaagtgtcagaagagtgtgggcgaaaacggcatcaaaatccgattaacgg-ttggaatttacgcgcgaaatggtgaaaat 16132850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 5109952 - 5110174
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||  || |||  ||||||  |   |||||||||    
T  5109952 ttgaaaaatcggtgtctaaacgtttt-gcaaataagatattatgtgaggtttgggaaatcgatttttggt-tggttgaaacttgagtttttctgtagatt 5110049  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||    
T  5110050 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaagattagaaaatct 5110149  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||  ||||||||||    
T  5110150 gatgttgtctgtcgagcagaaatcg 5110174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 5289316 - 5289533
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||| |||  |||||||||||||||||||||   || |||| ||||||  | ||||||| ||||||| || |||  ||||||| |  ||||||||||    
T  5289316 ttgaaaactcggtgtctaaacgtttttgcaaaca---gagtatgcgaggttctggaaatcgagttttggg-tggttgaaacttgaatt--ctgtagatta 5289409  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactg 231  Q
    ||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  5289410 tgatagagctaagtgtcaggagtgcgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctg 5289509  T
Q  232 ttgttgtctgtcaggcagaaatcg 255  Q
     |||||||||||  ||||||||||    
T  5289510 atgttgtctgtcgagcagaaatcg 5289533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 18659256 - 18659059
Alignment:
Q  23 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||  |||| ||||||    
T  18659256 aatttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggttttgggaaatcgatttt-ggggtggttgagacttaaaatag 18659158  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     |||||||||||||||| |||||| |||||| |||||||||||||||| |||| ||| | | |||||||||||  ||||||||||||||  ||||||||    
T  18659157 ttgtagattatgatagatccaagtttcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgacttttacgcgcgaaatggtgaaaat 18659059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 19443274 - 19443461
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||||||||||||     
T  19443274 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatgtttgagacttgaaatagctgtagattt 19443372  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  19443373 tgatagagccaagtgtcaggagaatgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 19443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 29415794 - 29416018
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa---tagctgtaga 128  Q
    ||||||| |||  ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||  |||||||    |  |||||||    
T  29415794 ttgaaaaatcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttggg-tggttgaaacttgaatctttttctgtaga 29415891  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaa 228  Q
    |||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||     
T  29415892 ttatgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgggttaacggtttggattttatgcgcgaaaacgtgaaaattagaaaat 29415991  T
Q  229 ctgttgttgtctgtcaggcagaaatcg 255  Q
    ||| |||||| ||||  ||||||||||    
T  29415992 ctgatgttgtatgtcgagcagaaatcg 29416018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 25753236 - 25753072
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaa 143  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  | || ||||||||||||||||||||||||||||    
T  25753236 gtctaaacgtttttgcaaataagggattatgtgaggtttaggaaaat-gattcttgggatggttgagaatttaaatagctgtagattatgatagagccaa 25753138  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaa 209  Q
    ||||||||| ||||||||||||||||||||| ||| | | ||||||||||| ||||||||||||||    
T  25753137 gtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaa 25753072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 25755406 - 25755242
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaa 143  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  | || ||||||||||||||||||||||||||||    
T  25755406 gtctaaacgtttttgcaaataagggattatgtgaggtttaggaaaat-gattcttgggatggttgagaatttaaatagctgtagattatgatagagccaa 25755308  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaa 209  Q
    ||||||||| ||||||||||||||||||||| ||| | | ||||||||||| ||||||||||||||    
T  25755307 gtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaa 25755242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 28948394 - 28948208
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaata 120  Q
    |||||| || |||||||||||  ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||     
T  28948394 gaatttttgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttttggaaaat-gattcttgggatggttgaaacttgaaatt 28948296  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcga 208  Q
     |||||||||||||||||||||||||||||||   | ||||||||||||||||| ||| | | ||||||||||| | |||||||||||    
T  28948295 tctgtagattatgatagagccaagtgtcaggagcatataggcgaaaacggcatcaaaatccgattaacggtttgaactttacgcgcga 28948208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 20177806 - 20177618
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||  ||| | |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||  |||||| || |||||||||||    
T  20177806 ttgaaaagtcagagtttgaacgtttttgcaaataagggattatgtgaggtttgggaaatcgatttttggggtggttgagacttgagattgctgtagatta 20177707  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     |||||||||||||||| |||  | |||||| ||||||||| | ||| | | ||||||||| | |||||| ||||||||  ||||||||    
T  20177706 agatagagccaagtgtccggagcgcgtaggcaaaaacggcaccaaaatccgattaacggttggaattttatgcgcgaaatagtgaaaat 20177618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 22158185 - 22158373
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||  ||| | |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||  |||||| || |||||||||||    
T  22158185 ttgaaaagtcagagtttgaacgtttttgcaaataagggattatgtgaggtttgggaaatcgatttttggggtggttgagacttgagattgctgtagatta 22158284  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     |||||||||||||||| |||  | |||||| ||||||||| | ||| | | ||||||||| | |||||| ||||||||  ||||||||    
T  22158285 agatagagccaagtgtccggagcgcgtaggcaaaaacggcaccaaaatccgattaacggttggaattttatgcgcgaaatagtgaaaat 22158373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 24441470 - 24441309
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||| || |||  ||||||| ||   ||||||||    
T  24441470 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtggggtttgggaaatcgatttttggg-tggttgaaacttgaatatttttgtagatt 24441373  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 194  Q
    ||||||| || |||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  24441372 atgatagggctaagtgtcaggagcgtgtaggcaaaaacggcatcgaaaacgggttaacggtttg 24441309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 13750516 - 13750699
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| || |||  |||||||  |  |||||||||    
T  13750516 ttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaggtttggaaa-tcgatttttggg-tggttgaaacttgaatctttctgtagatt 13750613  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||| || |||||||||||   |||||| ||||| |||||||||||| | ||||| |||||  ||||| |||||||||||||||    
T  13750614 atgatagggctaagtgtcaggagcatgtaggtgaaaa-ggcatcgaaaacagattaacagtttgatttttatgcgcgaaaacgtgaa 13750699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 18259436 - 18259598
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   ||||||||||||||||||| |||||||||||     
T  18259436 ttttgcaaataagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggag 18259534  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     || ||||| |||||||||||||||||||||||||||||||  | ||| | |||||||||||||    
T  18259535 cgtttaggcaaaaacggcatcgaaaacgggttaacggtttgattattatgtgcgaaaacgtgaa 18259598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 25348175 - 25347979
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagc 122  Q
    |||||| ||||||| ||| |||||||||||| ||||||| |||||| |||||||| |||||  ||||| |||  ||||| || |||  ||||||||| ||    
T  25348175 tttatgcttgaaaattcggagtctaaacgttcttgcaaataagagactatgtgagttttggggaaaat-gatccttgggatggttgagacttgaaattgc 25348077  T
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| |  ||||||||| ||||  ||||||||    
T  25348076 tgtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggatttttacgcgtgaaatggtgaaaat 25347979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 8226984 - 8227155
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || ||    
T  8226984 gtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaa 8227081  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  8227082 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 8227155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 16231690 - 16231509
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  16231690 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 16231592  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  16231591 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 16231509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 24563162 - 24563069
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  24563162 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaaacgtgaa 24563069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 23532219 - 23532311
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||| || ||||||||||   || |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  23532219 tagattatgatagggctaagtgtcaggtgcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 23532311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 18087316 - 18087461
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   ||||||||||||    
T  18087316 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaa 18087414  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    | ||||||||||||| |||||||||||  ||||| ||||||||||||    
T  18087415 ctgcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 18087461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 26089245 - 26089148
Alignment:
Q  163 gaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| ||||||||| ||||| |||||| ||||||  ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||    
T  26089245 gaaaacagcaccgaaaacggattaacagtttggtttttacatgcgaaaacgtgaaaattggaaaatctgatattgtctgtcaggcagaaatcggacta 26089148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 23977548 - 23977386
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  23977548 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 23977450  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||   |||||||| |||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  23977449 gagcatgtaggcggaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 23977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 16136082 - 16135917
Alignment:
Q  54 tttttgcaaacaagagattatgtgaggtttg-gaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagga 152  Q
    |||||||||| ||| |||||||||||||||  |||||  |||||| ||| || |||  ||||||| |   |||||||||||||||||  | |||||||||    
T  16136082 tttttgcaaataagcgattatgtgaggtttttgaaaagtgattttggggatg-ttgaaacttgaattttatgtagattatgatagagttatgtgtcagga 16135984  T
Q  153 aagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
      |  |||||||||||||||| |||||||||||||||||||| ||||||||||| |||  |||||||    
T  16135983 gcgcataggcgaaaacggcattgaaaacgggttaacggtttgaattttacgcgcaaaatggtgaaaa 16135917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 16448014 - 16448199
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||||||||||||||| || |||  |||  || |   || ||| ||    
T  16448014 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaactgtaatttttctttagttt 16448112  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||| | |||||||||  | ||||| |||||||||||||||||| |||||||||||||  ||||| |||||||||||||||    
T  16448113 gtgatagagctatgtgtcaggagcgcgtaggtgaaaacggcatcgaaaactggttaacggtttgatttttaggcgcgaaaacgtgaa 16448199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 31468017 - 31468154
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | |||||||||||| ||||| |||  |||||||  |  |||||||||    
T  31468017 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaatcgattttt-gggtggttgaaacttgaatttttctgtagatt 31468115  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacg 169  Q
    |||||||||  |||||||||||  |||||||| ||||||    
T  31468116 atgatagagttaagtgtcaggagcgtgtaggcaaaaacg 31468154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 19174957 - 19174794
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||| ||||||||||||||| ||||||| |||||| ||| || |||  ||||||| |   |||||||||||||||||  |||||||||||     
T  19174957 ttttgcaaataagcgattatgtgaggttttggaaaat-gatttt-gggatgcttgaaacttgaattttatgtagattatgatagagttaagtgtcaggag 19174860  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
     | ||||||||||||| ||| ||||||||||||||  |||| |||||| ||||||||  |||||||    
T  19174859 cgcgtaggcgaaaacgacattgaaaacgggttaacaatttgaattttatgcgcgaaatggtgaaaa 19174794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 10488493 - 10488307
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  10488493 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 10488395  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  10488394 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 10488307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 16376835 - 16377021
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16376835 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16376933  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  16376934 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 16377021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 16384159 - 16384345
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16384159 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16384257  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  16384258 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 16384345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 16649833 - 16650019
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16649833 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16649931  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| |||||||||||   ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  16649932 tgttagagtcaagtgtcagggtcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 16650019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 25904939 - 25904753
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || |||||||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  25904939 tgaaatgtcgatgtttaaacgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 25904841  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||  ||||||| |||||||||||| ||| | | |||| |||||| |||||||||||||||  |||||||    
T  25904840 tgttagagtcaagtgtcaagatcgtgtaggtgaaaacggcatcaaaatccgattaatggtttgcattttacgcgcgaaatggtgaaaa 25904753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 15735493 - 15735580
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
    |||||| |||||||||||| ||||||| ||||| |||||  |||||||| |||||||||| ||||||||||| ||| ||||||||||||    
T  15735493 tgtaggtgaaaacggcatcaaaaacggattaacagtttgatttttacgcacgaaaacgtg-aaattggaaaatctggtgttgtctgtca 15735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 244
Target Start/End: Complemental strand, 23994465 - 23994350
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||| ||||| |||||  ||||| |||||||||||| | || | |||||    
T  23994465 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacagtttgatttttatgcgcgaaaacgt-agaagttgaaaa 23994367  T
Q  228 actgttgttgtctgtca 244  Q
     ||| ||||||||||||    
T  23994366 tctgatgttgtctgtca 23994350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 16556603 - 16556789
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16556603 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16556701  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| ||||||| |||| ||| | | ||||||||||| |||||||||| ||||  |||||||    
T  16556702 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaa 16556789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 16633159 - 16633345
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  16633159 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 16633257  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| ||||||| |||| ||| | | ||||||||||| |||||||||| ||||  |||||||    
T  16633258 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaa 16633345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 19983751 - 19983928
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||| || || ||||||| || |||  || ||||||  || |||||||    
T  19983751 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaagat-gacttttgggatggttgaaacatgaaatttctatagatta 19983849  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    || ||||| |||||||| |||  || |||||||||||| |||| ||| | | ||||||||||| |||||||||||||||    
T  19983850 tgttagagtcaagtgtccggagcgtataggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaa 19983928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 33314761 - 33314855
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||| ||||||||  |||||||    
T  33314761 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttatgcgcgaaatggtgaaaa 33314855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 18003206 - 18003292
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||||||| || |||||| ||||   |||||| |||||||||||||||||||  |||||||||||  ||||| ||||||||||||    
T  18003206 attatgatagtgctaagtgtaaggagcatgtaggtgaaaacggcatcgaaaacgaattaacggtttgatttttatgcgcgaaaacgt 18003292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 22226293 - 22226387
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| || |||||||||  ||||||| ||||||| |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  22226293 tagattatgttagagtcatgtgtcaggatcgtgtaggtgaaaacgacatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 22226387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 18776704 - 18776608
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||||||||||||| | |||||||||||  ||||| ||| ||||||||||||    
T  18776704 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgtgaaaacgtgaaa 18776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 35015617 - 35015803
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||| || || ||||||| || |||  || ||||||   |||||||||    
T  35015617 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaatat-gacttttgggatggttgaaacatgaaatttttgtagatta 35015715  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||  || |||||||||||| |||| ||| | | ||||| ||||| | |||||||||||||  |||||||    
T  35015716 tgttagagtcaagtgtcatgagcgtataggcgaaaacgacatcaaaatccgattaacagtttgaaatttacgcgcgaaatggtgaaaa 35015803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 31468149 - 31468201
Alignment:
Q  208 aaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    ||||||||||||||||||||  || |||||||||| |||||||||||| ||||    
T  31468149 aaaacgtgaaaattggaaaatttgatgttgtctgttaggcagaaatcggacta 31468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 13621374 - 13621429
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    |||||| |||||||||||||||||||| |||||||||||  ||||| |||| ||||    
T  13621374 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcaaaaa 13621429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 25650763 - 25650688
Alignment:
Q  142 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||  |||||| ||||||||||||||||   | ||||| |||||  ||||| |||||||||||||||    
T  25650763 aagtgtcaggaacatgtaggtgaaaacggcatcgaaattagattaacagtttgatttttatgcgcgaaaacgtgaa 25650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 19102735 - 19102791
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggg 101  Q
    ||||||| |||||||||||  || ||||||||||||||| | ||| |||||||||||    
T  19102735 gtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccgatttttggg 19102791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 32950724 - 32950525
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  | |||||||||    
T  32950724 gaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttttggggtggttgagaattgaaatag 32950625  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaa-acgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||  ||||||||| | |||||||||||||||  ||||||||    
T  32950624 ctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcaccaaaatccgaattaacggttggaattttacgcgcgaaatggtgaaaat 32950525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 17611528 - 17611750
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||    
T  17611528 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagatt 17611625  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  17611626 atgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacacgcgaaaacgtgaaaattagaaaatct 17611725  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||  ||||||||||    
T  17611726 gatgttgtctgtcgagcagaaatcg 17611750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 23451284 - 23451097
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 128  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||   ||||| |||  ||||||| |   |||||||    
T  23451284 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttggaaaatcgattttttttgggtggttgaaacttgaatttttctgtaga 23451186  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||  |||||||||||  ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  23451185 ttatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgagttaacggtttgatttttacgcgcgaaaacgtgaa 23451097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 39694519 - 39694707
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  |||||||| |||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||||| ||||||||    
T  39694519 ttgaaaagtcggtgtctaaacatttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaatagccgtagatta 39694618  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||| ||||||||||||| |||||||||||| ||| |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  39694619 tgatagaaccaagtgtcaggagagtgtaggcgaatacgacatcaaaatccgattaacggtttgtattttacgcgcgaaatggtgaaaat 39694707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 22532386 - 22532563
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 144  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||| ||| ||||||||||||||||||||    
T  22532386 gtctaaacgtttttgcaaataagggattatgtgaggtttggcaaaatgattcttgggatggttgagacttgaaattgctatagattatgatagagccaag 22532485  T
Q  145 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    ||||||||  ||||||||||||||| |||| ||| | | ||||||||||| ||||||| |||||||  ||||||||||    
T  22532486 tgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaattg 22532563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 22537071 - 22537248
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 144  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||| ||| ||||||||||||||||||||    
T  22537071 gtctaaacgtttttgcaaataagggattatgtgaggtttggcaaaatgattcttgggatggttgagacttgaaattgctatagattatgatagagccaag 22537170  T
Q  145 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    ||||||||  ||||||||||||||| |||| ||| | | ||||||||||| ||||||| |||||||  ||||||||||    
T  22537171 tgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaattg 22537248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 215
Target Start/End: Complemental strand, 34302361 - 34302177
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 128  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||   ||||| |||  ||||||| |   | |||||    
T  34302361 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttggaaa-tcgattttttttgggtggttgaaacttgaatttttccgtaga 34302264  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    |||||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  34302263 ttatgatagagctaagtgttaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggcttggtttttatgcgcgaaaacgtg 34302177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 3273700 - 3273513
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaat-agctgtaga 128  Q
    ||||||||| |  ||||||||||||||||||| ||| || ||||||||||||||||| |||||||||   ||||| |||  ||||||| | | |||||||    
T  3273700 ttgaaaagttggtgtctaaacgtttttgcaaataagggagtatgtgaggtttggaaa-tcgattttttttgggtggttgaaacttgaatttatctgtaga 3273602  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  3273601 atatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcaaaaacgggttaacgatttggtttttatgcgcggaaacgtgaa 3273513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 24496415 - 24496237
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg--ggtgattgtcacttgaaatag-ctgtaga 128  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||    |||| |||  ||||||| |   |||||||    
T  24496415 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgtgaaatcgattttttttaggtggttgaaacttgaatttttctgtaga 24496317  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcga 208  Q
    |||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||| || ||||| ||||||    
T  24496316 ttatgatagagctaagtgtcaggagcgtgtaggcgaaaacgccatcgaaaacgggttaacggttaggtttttatgcgcga 24496237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 22583897 - 22584081
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagct-gtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| || |||  ||||||| |   | |||||||    
T  22583897 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaa-tcgatttttggg-tggttgaaacttgaatttttttgtagatt 22583994  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||| || ||||||||||||  |||||| |||||||||||||||||  | |||||||||||  ||||| |||| ||||||||||    
T  22583995 atgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaatagattaacggtttgttttttatgcgcaaaaacgtgaa 22584081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 188
Target Start/End: Complemental strand, 24979913 - 24979771
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||  ||||||| |   ||||||||||||||||||| ||    
T  24979913 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaa 24979816  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaac 188  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||    
T  24979815 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaac 24979771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 17501948 - 17501798
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||  ||||||||||||||||||||||||||||||   |||||||||||||    
T  17501948 gattatgtgaggttttggaaaat-gattcttgggatggttgaaacttgaaatttctgtagattatgatagagccaagtgtcaggggcgtgtaggcgaaaa 17501850  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  17501849 cggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 17501798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 26220362 - 26220177
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag--ctgtagat 129  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||| | ||||||||| || |||  ||| |||||    ||||||||    
T  26220362 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccaatttttggg-tggttgaaact-gaaatttttctgtagat 26220265  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||| |||||||||||  | |||||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  26220264 tatgatagagctaagtgtcaggagcgcgtaggcaaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 26220177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 39364592 - 39364396
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg-aaaatcgatttttggggtgattgtcacttgaaatagct 123  Q
    |||||| ||||||| ||| ||||||||||||  |||||| |||||| |||||||| ||||| ||||   ||  ||||| || |||  ||||||||| | |    
T  39364592 tttatgcttgaaaattcggagtctaaacgttcatgcaaataagagactatgtgagttttgggaaaaataatccttgggatggttgagacttgaaattgtt 39364493  T
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  39364492 gtagattaagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 39364396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 214
Target Start/End: Original strand, 13721386 - 13721567
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  13721386 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 13721484  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  13721485 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 13721567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 26222613 - 26222708
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||| ||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||    
T  26222613 ctgtagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacatgaa 26222708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 44522418 - 44522606
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  ||||| |||| ||||| || |||  ||||||||| |||||||||    
T  44522418 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgaggtttggggaaaat-gattcttgggatggttgagacttgaaattgctgtagat 44522515  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || ||||||||||||||||||||  ||| |||||||||| ||| | ||| | | |||||| ||   |||||||||||||||  ||||||||    
T  44522516 taagatagagccaagtgtcaggagcgtggaggcgaaaacagcaccaaaatccgattaacgattgaaattttacgcgcgaaatggtgaaaat 44522606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 30766240 - 30766333
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||| ||  ||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  30766240 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcattgaaaacgggttaacggttgggtttttacgcgcgaaaacgtgaa 30766333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 20481132 - 20481056
Alignment:
Q  142 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  20481132 aagtgtcaggagcatgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacttgaaa 20481056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 13662726 - 13662912
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  13662726 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gaattttgggatggttgaaacatgaaatttttgtagatta 13662824  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||| ||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  13662825 tgttagagtcaagtctcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 13662912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 16873528 - 16873690
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  16873528 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 16873626  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  16873627 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 16873690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 23889614 - 23889431
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 130  Q
    ||||||| |||  ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||  ||||| |||  |||||||  |  |||||||||    
T  23889614 ttgaaaaatcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg-aaatcgatttt--gggtggttgaaacttgaatttttctgtagatt 23889518  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||| || || | | |||||  |||||| |||||||||||||||||| | |||||||||||  ||| | ||||||||| |||||    
T  23889517 atgatagggctaaatattaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgattttaatgcgcgaaaatgtgaa 23889431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 4233664 - 4233514
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| |||| ||||| || |||  |||||||||   ||||||||||||||||   |||||||||||  |||||||||||||    
T  4233664 gattatgtgaggttttggaaaat-gattcttgggatggttgagacttgaaatttatgtagattatgatagatttaagtgtcaggagcgtgtaggcgaaaa 4233566  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  4233565 cgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 4233514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 644098 - 643912
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  644098 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 644000  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  643999 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 643912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 271915 - 272009
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  271915 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaa 272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 829740 - 829646
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  829740 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaa 829646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 3431830 - 3431918
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    ||||||||||||||| | ||||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| || ||||||    
T  3431830 tgtagattatgatagtgtcaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcacgaaaa 3431918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 15319621 - 15319807
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg-tagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||| || ||||||| || |||  || ||||||   |  |||||||    
T  15319621 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttgaaaat-gacttttgggatggttgaaacatgaaattttttatagatta 15319719  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||| ||||  |||||||    
T  15319720 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaa 15319807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 15499990 - 15500176
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg-tagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||| || ||||||| || |||  || ||||||   |  |||||||    
T  15499990 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttgaaaat-gacttttgggatggttgaaacatgaaattttttatagatta 15500088  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||| ||||  |||||||    
T  15500089 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgtgaaatggtgaaaa 15500176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 22006758 - 22006908
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||| ||||| ||||||||| ||  |||||||||||||    
T  22006758 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaa 22006856  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||| ||| | | ||||| ||||  |||||||||||||||  |||||||    
T  22006857 cggcatcaaaatccgattaacagtttaaattttacgcgcgaaatggtgaaaa 22006908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 39114862 - 39114725
Alignment:
Q  81 tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaac 180  Q
    |||||||||| |||||||||| ||||||  || || |||   ||||||||||| ||||| ||||||||||||  ||||||||||||||  |||| ||| |    
T  39114862 tttggaaaat-gatttttgggatgattgaaacatggaatttttgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacaacatcaaaatc 39114764  T
Q  181 gggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
     | |||||| |||| |||||||||||||||  |||||||    
T  39114763 cgattaacgatttgaattttacgcgcgaaatggtgaaaa 39114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 273955 - 273896
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    |||||| |||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  273955 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 273896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 641894 - 641953
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    |||||| |||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  641894 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 827700 - 827759
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    |||||| |||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  827700 tgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 827759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 23809533 - 23809455
Alignment:
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    ||||||||  |||| ||||||  | |||| |||||| || ||||||||||| |||||||||||||||||||||||||||    
T  23809533 tgatagagttaagtttcaggagcgcgtagacgaaaatggaatcgaaaacggattaacggtttggattttacgcgcgaaa 23809455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 24717415 - 24717496
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgc 204  Q
    ||||||||||| |||||  |||||||||||  |||||||||||||||||||| ||| | | |||||||| || |||||||||    
T  24717415 tgtagattatgttagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtatgaattttacgc 24717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 16039593 - 16039679
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||||||| || |||||| ||||   |||||| ||||||| |||||||||||| |||| ||||||  ||||| ||||||||||||    
T  16039593 attatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaacggattaatggtttgatttttatgcgcgaaaacgt 16039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 5080930 - 5080846
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaac 212  Q
    ||||||||||  | ||||| ||||||  |||||| |||||||||||||||||| | ||||| |||||  ||||| ||||||||||    
T  5080930 attatgatagtactaagtggcaggaacatgtaggtgaaaacggcatcgaaaacagattaacagtttgatttttatgcgcgaaaac 5080846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 24386484 - 24386539
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    |||||| ||||||| |||||||||||| |||||||||||  ||||| |||||||||    
T  24386484 tgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaaa 24386539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 18366742 - 18366938
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||  |||  |||||||||||    
T  18366742 gaatttatgattgaaaagtcggagtctaaacgtttttgcaaacatgagattatgtgaggtttgggaaatcgatttt--gggtttttgagacttgaaatag 18366839  T
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  18366840 ttgtagattatgatagagccaagtgtcagaagagtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 18366938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 15517464 - 15517237
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||||||   ||||||||||||| ||||| ||| ||||||||||||||| |||||| ||||||||||  | |||  ||||||| |   |||||||||    
T  15517464 ttgaaaagtcagtgtctaaacgtttt-gcaaataagtgattatgtgaggttttgaaaattgatttttgggtag-ttgaaacttgaatttttctgtagatt 15517367  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| ||| || ||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15517366 atgatagagctaagagttaggagcgtgtaggcgaaaacggcatcaaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaatct 15517267  T
Q  231 gttgttgtctgtcaggcagaaatcgtacta 260  Q
    | ||||||||||||||||||||||| ||||    
T  15517266 gatgttgtctgtcaggcagaaatcggacta 15517237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 32 - 255
Target Start/End: Complemental strand, 12536463 - 12536240
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | ||| | ||||||||  || |||  ||||||| |   |||||||||    
T  12536463 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaaccaatttttgga-tggttgaaacttgaatttttctgtagatt 12536365  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||    
T  12536364 atgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacggtttggattttacgcgagaaaacgtgaaaatttgaaaatct 12536265  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||||||||||||||    
T  12536264 gatgttgtctgtcaggcagaaatcg 12536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 178711 - 178908
Alignment:
Q  23 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 122  Q
    |||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||||    
T  178711 aatttatgtttgaagagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagc 178810  T
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||||||   |||||| ||||||||  ||||||||    
T  178811 tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttgaaattttatgcgcgaaatggtgaaaat 178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 13029400 - 13029587
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  |||||||||||||||||||||    
T  13029400 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctgtagatta 13029498  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  13029499 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 13029587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 220
Target Start/End: Original strand, 3393982 - 3394181
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgat-tgtcacttgaaata 120  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |   ||  |||| |||||    
T  3393982 gaatttatgcttgaaaagtcagagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgattttgggggggggctgagacttaaaata 3394081  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | |||| |||||| |||||||||||||||  ||||||||    
T  3394082 gctgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaagggtttgaattttacgcgcgaaatggtgaaaat 3394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 13025808 - 13025995
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| |||||||||| |||||||||| |||  |||||||||| || |||  |||||||||||||||||||||    
T  13025808 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatttgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctgtagatta 13025906  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  13025907 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 13025995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 222
Target Start/End: Complemental strand, 37038859 - 37038669
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||| ||||| || |||  ||||||||||||||||||||    
T  37038859 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttttggaaaat-gattcttgggatggttgagacttgaaatagctgtagatt 37038761  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    ||||||||||||||| ||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  ||||||||||    
T  37038760 atgatagagccaagtttcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaattg 37038669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 12276615 - 12276422
Alignment:
Q  26 ttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgt 125  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||  || |||||||||| |    
T  12276615 ttatgcttgaaaaatcggagtctaaacgtttttgcaaacaagagattatctgaggtttgggaaatcgatttt-ggggtggttgagacatgaaatagctat 12276517  T
Q  126 agattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||| |||| ||||||||| |||||| |||| ||| | | ||||||||||| || ||| ||||||||  ||||||||    
T  12276516 agattatgatagagccaagtgttaggagagtgtaggcaaaaacgacatcaaaatccgattaacggtttgaatgttatgcgcgaaatggtgaaaat 12276422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 20188448 - 20188314
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20188448 ctgtagattatgatagagctaagtgtcaggaacgcgtaggcgaaaacggcatcgaaaacgggttaatggtttggattttacgcgcgaaaacgtgaaaatt 20188349  T
Q  222 -ggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
     |||||| ||| |||||||||||  ||||||||||    
T  20188348 aggaaaatctgatgttgtctgtcgagcagaaatcg 20188314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 23395344 - 23395474
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  23395344 tgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaatta 23395443  T
Q  223 gaaaaactgttgttgtctgtcaggcagaaat 253  Q
    ||||| ||| |||||||||||  ||||||||    
T  23395444 gaaaatctgatgttgtctgtcgagcagaaat 23395474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 17547709 - 17547930
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||||||   ||||||||||||  ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   ||||||||     
T  17547709 ttgaaaagtcagtgtctaaacgttt--gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagata 17547805  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    ||||||  || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  17547806 atgataaggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatct 17547905  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||  ||||||||||    
T  17547906 gatgttgtctgtcgagcagaaatcg 17547930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 255
Target Start/End: Original strand, 34851562 - 34851761
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||| ||||||||||||||| | |||||||| |||||| || |||  |||| || |   ||||||||||||||||||| |||||||||||     
T  34851562 ttttgcaaataagtgattatgtgaggttttggaaatcgatatttggg-tggttgaaacttaaatttttctgtagattatgatagagctaagtgtcaggag 34851660  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 253  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||| |||||||||||  ||||||||    
T  34851661 cgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgtgaaaacgtg-aaattagaaaatctgatgttgtctgtcgagcagaaat 34851759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 42324213 - 42324400
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttg-gaaaatcgatttttggggtgattgtcacttgaaatagctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| |||  ||||||||||||||| |||||| |||| ||||| || |||  ||||||||||||||||||||    
T  42324213 ttgaaaagtcggtgtctaaacgtttttgcaaataaggaattatgtgaggtttgagaaaat-gattcttgggatggttgagacttgaaatagctgtagatt 42324311  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  42324312 atgatagagccaagtgtcaggagagtgtaggcgaaaac-gcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 42324400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 38167460 - 38167327
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38167460 ctgtacattaagatagggctaagtgtcaggagtgtgtaggtgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaatt 38167361  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    |||||| ||| |||||||||||| | ||||||||    
T  38167360 ggaaaatctgatgttgtctgtcaagtagaaatcg 38167327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 243
Target Start/End: Original strand, 11849835 - 11850043
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  |||||||||||||||||||||   || |||| ||||||  | ||||||| ||||||| || |||  ||||||| |   |||||||||    
T  11849835 ttgaaaactcggtgtctaaacgtttttgcaaaca---gagtatgcgaggttctggaaatcgagttttggg-tggttgaaacttgaatttttctgtagatt 11849930  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| ||||||||| |  | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  11849931 atgatagagctaagtgtcagaagcgcgtaggcgaaaacggtatcgaaaacgggttaacggtttggatcttacgcgcgaaaacgtgaaaattagaaaatct 11850030  T
Q  231 gttgttgtctgtc 243  Q
    | |||||||||||    
T  11850031 gatgttgtctgtc 11850043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 14818905 - 14818710
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 120  Q
    ||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||| || |||||||||| |||  |||||||  |     
T  14818905 gaatttatgcttgaaaagtcggagtctaaatgtttttgcaaataagagattatgtgaggtttgggaaataga-ttttggggtggttgaaacttgaatctt 14818807  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
      |||| |||||||||| || ||||||||||||  |||||| ||||| |||||||||||| | |||||||||||  ||||| |||||||||||||||    
T  14818806 tatgtatattatgatagggctaagtgtcaggaacatgtaggtgaaaatggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgtgaa 14818710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 23491923 - 23491785
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  23491923 ctgtacattaagatagggctaagtgtcatgaacaagtaggtgaaaacggcaccgaaaacggattaacggtttggtttttacgcgcgaaaacgtgaaaatt 23491824  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| ||||||||||||||||||||||| ||||    
T  23491823 ggaaaatctgatgttgtctgtcaggcagaaatcggacta 23491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 29172095 - 29172275
Alignment:
Q  36 aaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatga 134  Q
    |||||||  ||||||||||||| ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||||||    
T  29172095 aaagtcggtgtctaaacgtttt-gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatga 29172192  T
Q  135 tagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  29172193 tagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 29172275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 37641736 - 37641921
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||| |||||  |||||||||||| |||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||    
T  37641736 ttgaatagtcggtgtctaaacgtttatgcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagatt 37641834  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  37641835 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 37641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 9511158 - 9511346
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  ||||||||||||||||||| ||  |||||||||| |||||| |||  |||| ||||| || |||  |||||||||  ||||||||||    
T  9511158 ttgaaaagtcggtgtctaaacgtttttgcaaataaaggattatgtgacgtttgggaaaatgattcttgggatggttgagacttgaaatttctgtagatta 9511257  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||| |||||||||||  |||||||||||||||| ||| ||| | | ||||||||||  |||||||||||||||  ||||||||    
T  9511258 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggaatcaaaatccgattaacggtttcaattttacgcgcgaaatggtgaaaat 9511346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 9519133 - 9519321
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  ||||||||||||||||||| ||  |||||||||| |||||| |||  |||| ||||| || |||  |||||||||  ||||||||||    
T  9519133 ttgaaaagtcggtgtctaaacgtttttgcaaataaaggattatgtgacgtttgggaaaatgattcttgggatggttgagacttgaaatttctgtagatta 9519232  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||| |||||||||||  |||||||||||||||| ||| ||| | | ||||||||||  |||||||||||||||  ||||||||    
T  9519233 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggaatcaaaatccgattaacggtttcaattttacgcgcgaaatggtgaaaat 9519321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 24340184 - 24340345
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||    
T  24340184 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagatt 24340281  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 194  Q
    ||||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  24340282 atgatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 24340345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 13511878 - 13511691
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 128  Q
    |||||||||||  ||||||||||||| ||||| ||| ||| ||||||||||||| |||| |||||||   ||||| |||  ||||||| |   |||||||    
T  13511878 ttgaaaagtcggtgtctaaacgtttt-gcaaataagcgataatgtgaggtttgggaaatagattttttttgggtggttgaaacttgaatttttctgtaga 13511780  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||| |||| ||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  13511779 ttatgatagagctaagtttcaggagcgtgtaggagaaaacggcatcgaaaacgggttaacggtttggtttttatgcgggaaaacgtgaa 13511691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 36167341 - 36167156
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    ||||| |||||  ||||||| ||||| |||||  || ||||||||||||||| | ||| ||||||||||| || |||  ||| |||  |  |||||||||    
T  36167341 ttgaagagtcggtgtctaaatgttttggcaaatgagtgattatgtgaggttttggaaaccgatttttggg-tggttgaaactggaatctttctgtagatt 36167243  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  36167242 gtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 36167156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 52338192 - 52338376
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc-tgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||| |||| |||||||||| | | |||||||||||||  | ||   ||||||| |  | ||||||||    
T  52338192 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattgtgtgaggttttggagatcgatttttgggcgg-ttaaaacttgaattttcctgtagatt 52338289  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  52338290 atgatagagctaagtgtcaggagagtttaggcaaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 52338376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 12159096 - 12158908
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg----gggtgattgtcacttgaaatag-ctgta 126  Q
    |||||||||||  ||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||     ||||| |||  ||||||| |   |||||    
T  12159096 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatctgaggtttgggaaatcgattttttttttgggtggttgaaacttgaatttttctgta 12158998  T
Q  127 gattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||||||  ||||||||| |  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  12158997 aattatgatagagttaagtgtcag-agcgtgtaggcgaaaatggcatcgaaaacgggttaacggtttgatttttatgcgcgaaaacgtgaa 12158908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 45530844 - 45531030
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 128  Q
    |||||||||||  ||||||||||||||||||| | | |||||||||||||||||||| || ||||||   ||||| |||  ||||||| |   |||||||    
T  45530844 ttgaaaagtcggtgtctaaacgtttttgcaaataggggattatgtgaggtttggaaa-tcaattttttttgggtggttggaacttgaatttttctgtaga 45530942  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtga 216  Q
    ||||||||| |||||||||||||||  |||||| |||||||| ||||||||| | |||||||||||  ||||| | ||||||||||||    
T  45530943 ttatgatagggccaagtgtcaggaacatgtaggtgaaaacggtatcgaaaacagattaacggtttgatttttatgagcgaaaacgtga 45531030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 52212659 - 52212818
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 120  Q
    ||||||| | ||||||||||| ||| ||||| |||||||||| |||||||||||||||| |||| ||||||| |||||||||| |||  |||||||  |     
T  52212659 gaatttacgcttgaaaagtcggagtgtaaacatttttgcaaataagagattatgtgaggcttgggaaatcga-ttttggggtggttgaaacttgaatctt 52212757  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacg 181  Q
     |||||||||||||||| || ||||||||||||  |||||  |||||||||||||||||||    
T  52212758 tctgtagattatgatagggctaagtgtcaggaacatgtagatgaaaacggcatcgaaaacg 52212818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 22147021 - 22147183
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || |||||||||||     
T  22147021 ttttgcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaagtgtcaggag 22147119  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     || |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  22147120 cgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 22147183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 18910791 - 18910610
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  18910791 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 18910693  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||| ||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  18910692 tgatagtgccaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 18910610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 13968129 - 13968222
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  13968129 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaaacgtgaa 13968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 13973604 - 13973697
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||| ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  13973604 gtagattatgatagagctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggttgggtttttacgcgcgaaaacgtgaa 13973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 21619102 - 21619007
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||| ||||||||  |||||||||||  | ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  21619102 ctgtagattgtgatagagttaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 21619007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 50351068 - 50351248
Alignment:
Q  39 gtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatag 137  Q
    ||||| || ||| ||||||||| || ||| ||||||||||||||| || ||||  ||| ||||| || |||  |||||||||  ||||||||||||||||    
T  50351068 gtcgatgtttaagcgtttttgccaataagtgattatgtgaggttttgggaaata-attattgggatggttgagacttgaaatttctgtagattatgatag 50351166  T
Q  138 agccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  |||||||||||  ||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  50351167 agttaagtgtcaggaccgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 50351248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 17513640 - 17513452
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  ||||||||||||| ||||| |||||| |||||||| |||||  ||||| |||  |||||  | ||   ||||||||| |||||| ||    
T  17513640 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgagttttggggaaaat-gatacttgggagggttaagacttgaaattgctgtaaat 17513543  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || ||||||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  17513542 taagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 17513452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 54038740 - 54038917
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| |||||| |||||||| ||||||| |||||||||| || |||  || || |||   |||||||||    
T  54038740 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatatgaggttttggaaaat-gatttttgggatggttgaaacatggaatttttgtagatta 54038838  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    || ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||    
T  54038839 tgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaa 54038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 28557754 - 28557657
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    |||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  28557754 ctgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 28557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 30207029 - 30206849
Alignment:
Q  39 gtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatag 137  Q
    |||||||| ||| |||||| || || ||| ||||||||||||||| ||||||| |||||||| | || |||  || ||||||  ||||| |||||| |||    
T  30207029 gtcgaagtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gatttttgagatggttgaaacatgaaatttctgtaaattatgttag 30206931  T
Q  138 agccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||||||||||  |||||||||||||| | ||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  30206930 agtcaagtgtcaggagcgtgtaggcgaaaacagtatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 30206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 8604558 - 8604463
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||||||||| || ||||||||||||  |||||| |||||||||||||||||| | |||||||||||  ||||| |||||||||||||||    
T  8604558 ctgtacattatgatagggctaagtgtcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgtgaa 8604463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 16820935 - 16820749
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||  || |||  || ||||||   |||||||||    
T  16820935 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttggaatggttgaaacatgaaatttttgtagatta 16820837  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||  ||||||||||||||| |||| ||| | | |||||||||||||||||||||||||||  |||||||    
T  16820836 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttggattttacgcgcgaaatggtgaaaa 16820749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 40039355 - 40039541
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| |||| ||||| || ||   |||||||||  ||||||||||    
T  40039355 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gattcttgggatggtttaaacttgaaatttctgtagatta 40039453  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| |||||||||||  |||| ||||||| ||||||| |||   | ||||||||||| |||||| ||||||||  |||||||    
T  40039454 tgatagagctaagtgtcaggagcgtgtgggcgaaagcggcatcaaaatttgattaacggtttgaattttatgcgcgaaatagtgaaaa 40039541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 17956463 - 17956630
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| |||||||| |  | |||  || ||||||  |||||||||||| ||||| ||||||||||    
T  17956463 cgttttcgccaataagtgattatgtgaggttttggaaaat-gatttttgagaaggttgaaacatgaaatttctgtagattatgttagaggcaagtgtcag 17956561  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  ||||||||||||||| |||| ||| | | ||||||||||| ||||||||| |||||  |||||||    
T  17956562 gagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcacgaaatggtgaaaa 17956630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 244
Target Start/End: Complemental strand, 53770583 - 53770468
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||| | || | |||||    
T  53770583 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaa 53770485  T
Q  228 actgttgttgtctgtca 244  Q
     ||| ||||||||||||    
T  53770484 tctgatgttgtctgtca 53770468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 1468201 - 1468387
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  1468201 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 1468299  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  1468300 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 1468387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 10551114 - 10550929
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttga-aatagctgtagatt 130  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||| |||||||| ||||| |||  ||| ||   |   |||| |||    
T  10551114 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccgattttt-gggtggttgaaactggattttttttgtatatt 10551016  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||| |||||| ||||  | |||||||||||||||||||||||||| ||||||||||   ||||| |||||||||||||||    
T  10551015 gtgatagagctaagtgttaggagcgcgtaggcgaaaacggcatcgaaaacggattaacggttttatttttaggcgcgaaaacgtgaa 10550929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 16934462 - 16934629
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||| ||||| ||||||||||    
T  16934462 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgttagagtcaagtgtcag 16934560  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  ||||||||||||||||| || ||| | | ||||||||||| ||||||  |||||||  |||||||    
T  16934561 gagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttattcgcgaaatggtgaaaa 16934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 219
Target Start/End: Complemental strand, 49232212 - 49232045
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | ||||||||| ||||| ||||||||||    
T  49232212 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagattatgttagagtcaagtgtcag 49232114  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  ||||||| |||||||||||| ||| | | ||||||||||| ||||||||||| |||  |||||||    
T  49232113 gatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcaaaatggtgaaaa 49232045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 11061707 - 11061802
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||| |||||||| |||||||| |||  |||||| ||||||||  |||||||||| |||||||||||  ||||| |||||||||||||||    
T  11061707 ctgtacattaagatagagctaagtgtcatgaacatgtaggtgaaaacggtgtcgaaaacggattaacggtttgatttttatgcgcgaaaacgtgaa 11061802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 17100201 - 17100106
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||| |||||||| |||||||| |||   ||||| |||||||||||||||||||| ||||||| |||  ||||| |||||||||||||||    
T  17100201 ctgtacattaagatagagctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggattgatttttatgcgcgaaaacgtgaa 17100106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 13667324 - 13667460
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttga-aatagctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||  |||| |||  ||||||   |  |||||||||    
T  13667324 ttgaaaactcggtgtctaaacgtttt-gcaaataagagattatgcgaggtttgggaaatcgattttt-aggtggttgaaacttgagtctttctgtagatt 13667421  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacg 169  Q
    |||||||||  |||||||||||  |||||||||||||||    
T  13667422 atgatagagttaagtgtcaggagcgtgtaggcgaaaacg 13667460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 19430636 - 19430553
Alignment:
Q  127 gattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    ||||| |||||| | ||||| |||||  ||||| ||||||||||||||||||||   ||||||||||| |||||||||||||||    
T  19430636 gattaggatagaactaagtggcaggagcgtgtacgcgaaaacggcatcgaaaacaaattaacggtttgaattttacgcgcgaaa 19430553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 11882755 - 11882844
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |  ||||||||||||   ||||| ||||||||||| |||||| | |||||||||||  ||||| |||||||||||||||    
T  11882755 attatgataggggtaagtgtcaggaacaagtaggtgaaaacggcattgaaaacagattaacggtttgatttttatgcgcgaaaacgtgaa 11882844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 13327077 - 13327166
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||  | ||||||||||||   ||||| |||||||||||||||||| | |||||||||||  ||||| | |||||||||||||    
T  13327077 attatgataggtctaagtgtcaggaacaagtaggtgaaaacggcatcgaaaacagtttaacggtttgatttttatgtgcgaaaacgtgaa 13327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 17758767 - 17758830
Alignment:
Q  111 acttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatc 174  Q
    |||||||||  ||||||||||||||||||| |||||| ||||  |||||||||||||| |||||    
T  17758767 acttgaaatttctgtagattatgatagagctaagtgttaggagtgtgtaggcgaaaacagcatc 17758830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 19060087 - 19060150
Alignment:
Q  111 acttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatc 174  Q
    |||||||||  ||||||||||||||||||| |||||| ||||  |||||||||||||| |||||    
T  19060087 acttgaaatttctgtagattatgatagagctaagtgttaggagtgtgtaggcgaaaacagcatc 19060150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 20417859 - 20417784
Alignment:
Q  142 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||  |||||| |||||||||||||||||  | ||||| |||||  ||||| |||||||||||||||    
T  20417859 aagtgtcaggaacatgtaggtgaaaacggcatcgaaaatagattaacagtttgatttttatgcgcgaaaacgtgaa 20417784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 2843707 - 2843646
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
    ||||| |||||||||||||||||||| |||| ||||||  ||||| ||||||||||| ||||    
T  2843707 gtaggtgaaaacggcatcgaaaacggattaatggtttgatttttatgcgcgaaaacgcgaaa 2843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 3992090 - 3992005
Alignment:
Q  133 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
    ||||| || |||||||| ||||  ||||| ||||||||||||| |||||| |||||||||||  | ||| ||||||||| ||||||    
T  3992090 gatagggctaagtgtcatgaaaacgtaggtgaaaacggcatcggaaacggattaacggtttgattattatgcgcgaaaatgtgaaa 3992005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 51961708 - 51961788
Alignment:
Q  163 gaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
    ||||||||| |||||||||| |||||||||||  ||||| |||||||||||| | || | ||||| ||| ||||||||||||    
T  51961708 gaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaatctgatgttgtctgtca 51961788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 16260976 - 16260889
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
    |||||| ||||| |||||||||||||| |||||| ||||  ||||| |||||||||||| | || | ||||| ||| ||||||||||||    
T  16260976 tgtaggtgaaaatggcatcgaaaacggattaacgatttgatttttatgcgcgaaaacgt-agaagttgaaaatctgatgttgtctgtca 16260889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 12808924 - 12808861
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  12808924 tgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 12808861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 6867 - 6672
Alignment:
Q  23 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 122  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||  ||  ||||||||||||    
T  6867 aatttatgcttgaaaagtcggagtctaaacgtttttccaaacaagagattatgtgaggtttggaaa-tcgatttt-ggggtggatgagacttgaaatagc 6770  T
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  6769 tgtagattatgatagagccaagtgtcaggagagtgtaggcgaaaatggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 6672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 75602 - 75374
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | ||| ||||||||||| || |||  ||||||| |   |||||||||    
T  75602 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaaccgatttttggg-tggttgaaacttgaatttttctgtagatt 75504  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    || ||||||| || ||||||||  | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  75503 attatagagctaaatgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaattggaaaatct 75404  T
Q  231 gttgttgtctgtcaggcagaaatcgtacta 260  Q
    | ||||||||||||||||||||||| ||||    
T  75403 gatgttgtctgtcaggcagaaatcggacta 75374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 55 - 255
Target Start/End: Complemental strand, 60216 - 60016
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||||||||| || |||||||||||     
T  60216 ttttgcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagtgctaagtgtcaggag 60118  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 253  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||| |||||||||||  ||||||||    
T  60117 cgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttactcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtcgagcagaaat 60018  T
Q  254 cg 255  Q
    ||    
T  60017 cg 60016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 72755 - 72524
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag----ctgtag 127  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  | ||| ||||||||||| || |||  ||||||  |      ||||||    
T  72755 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaaccgatttttggg-tggttgaaacttgatttttttttctgtag 72657  T
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    ||||| ||||||| |||||||||||  |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  72656 attattatagagctaagtgtcaggagcgtgtaggcgaaaacggtattgaaaacgggttaacagtttggattttacgcgcgaaaacgtgaaaattggaaaa 72557  T
Q  228 actgttgttgtctgtcaggcagaaatcgtacta 260  Q
     ||| |||||| ||| |||||||||||| ||||    
T  72556 tctgatgttgtttgtgaggcagaaatcggacta 72524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 187612 - 187691
Alignment:
Q  164 aaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
    ||||||||||||||||||| |||||||||||  |||||| |||||||||||| ||||||||||| ||| ||||||||||||    
T  187612 aaaacggcatcgaaaacggattaacggtttgatttttacacgcgaaaacgtg-aaattggaaaatctggtgttgtctgtca 187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 5e-59; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 255
Target Start/End: Complemental strand, 18271122 - 18270913
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   |||||||||||||||||| ||    
T  18271122 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagagctaa 18271025  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 243  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  18271024 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtc 18270925  T
Q  244 aggcagaaatcg 255  Q
      ||||||||||    
T  18270924 gagcagaaatcg 18270913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 255
Target Start/End: Complemental strand, 18275776 - 18275567
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   |||||||||||||||||| ||    
T  18275776 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagattatgatagagctaa 18275679  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 243  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  18275678 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgtc 18275579  T
Q  244 aggcagaaatcg 255  Q
      ||||||||||    
T  18275578 gagcagaaatcg 18275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 7320835 - 7321062
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  || |||||||||||||||| ||| ||||||||||||||  | ||||||||||||||| || ||   ||||||| |  ||| ||||||    
T  7320835 ttgaaaagtcggtgtataaacgtttttgcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttaaaacttgaattttctgcagatta 7320933  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactg 231  Q
    ||||||||| |||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||| |||    
T  7320934 tgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacggattaacggtttggattttacgcgcgaaaacattgaaattggaaaatctg 7321033  T
Q  232 ttgttgtctgtcaggcagaaatcgtacta 260  Q
     |||||||||||||||| |||||| ||||    
T  7321034 atgttgtctgtcaggcaaaaatcggacta 7321062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 20058204 - 20058067
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    |||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  20058204 tgtagattatgatagagctaactgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaatggtttggattttacgcacgaaaacgtgaaaattg 20058105  T
Q  223 gaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    ||||| ||| ||||||||||||||||||||||| ||||    
T  20058104 gaaaatctgatgttgtctgtcaggcagaaatcggacta 20058067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 13527952 - 13528173
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||  ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||    
T  13527952 ttgaaaagtcggtgtctaaacgttt--gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 13528048  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    ||||||  || |||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||    
T  13528049 atgataaggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaatgggttaacggtttggattttacgcgcgaaaacgtgaaagttagaaaatct 13528148  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||  ||||||||||    
T  13528149 gatgttgtctgtcgagcagaaatcg 13528173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 21660192 - 21659996
Alignment:
Q  23 aatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagc 122  Q
    |||||||| ||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||  |||||||||| ||||||  ||  |||||| |||||    
T  21660192 aatttatgtttgaagagtcggagtctaaacgtttttgaaaaaaagagattatgtgaggtttggggaatcgatttt-ggggtggctgagacttgagatagc 21660094  T
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||   | ||||||||| | |||||||||||||||  ||||||||    
T  21660093 tgtagattatgatagagccaagtgccaggagagtgtaggcgaaaacgacatcaaaattcgattaacggttggaattttacgcgcgaaatggtgaaaat 21659996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 52984037 - 52983852
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 130  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| |||  ||||||| ||  |||||||||    
T  52984037 ttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgattttt-gggtggttgaaacttgaatatttctgtagatt 52983939  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||| || |||| |||||||  |||||| |||||||||||||||||| | |||||||||||  ||||| |||| ||||||||||    
T  52983938 atgatagggctaagtttcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcaaaaacgtgaa 52983852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 35 - 220
Target Start/End: Complemental strand, 51324312 - 51324127
Alignment:
Q  35 aaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatga 134  Q
    ||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||  |||||||||||||    
T  51324312 aaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaatttctgtagattatga 51324213  T
Q  135 tagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||   |||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  51324212 tagagccaagtgtcaggagcatgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 51324127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 18824430 - 18824246
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||| ||||| ||||| ||||||||||||||||||||| ||||| |||||| || || |||  ||||||| |   |||||||||    
T  18824430 ttgaaaagtcggtgtctaaaggtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttagg-tggttgaaacttgaatttttctgtagatt 18824333  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  18824332 atgatagagctaagtgtcaggagcgtgtaggcgaaaatggcatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 18824246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 21473602 - 21473441
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  |||||||  |   ||||||||    
T  21473602 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatctttttgtagatt 21473505  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 194  Q
    ||||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  21473504 atgatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 21473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 21239286 - 21239474
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttg-gaaaatcgatttttggggtgattgtcacttgaaatagctgtagatt 130  Q
    |||||||||||  ||| ||||| ||||||||| ||| |||||||||||||||| |||||| |||| || || || |||  ||||||||   |||||||||    
T  21239286 ttgaaaagtcggtgtcaaaacgattttgcaaataagggattatgtgaggtttgagaaaat-gattcttcggatggttgagacttgaaaattctgtagatt 21239384  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||||  |||||||| ||||||||||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  21239385 atgatagagccaagtgtcaggagcgtgtaggcaaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 21239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 20030882 - 20031070
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  ||||| ||| |||||| || |||  ||||||||| |||||||||    
T  20030882 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgaggtttggggaaaat-gatctttgggatggttgagacttgaaattgctgtagat 20030979  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || ||||||||||||||||||||  |||||||||||||||||| | ||| | | |||||| ||   |||||||||||||||  ||||||||    
T  20030980 taagatagagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacgattgaaattttacgcgcgaaatggtgaaaat 20031070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 51476803 - 51476618
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg-gggtgattgtcacttgaaatag-ctgtagat 129  Q
    |||||||||||  ||||||||||||||| ||| ||| |||| ||||||||||||||| |||||||||  ||||| |||  ||||||| |   ||||||||    
T  51476803 ttgaaaagtcggtgtctaaacgtttttgtaaataagggattgtgtgaggtttggaaa-tcgatttttttgggtggttgaaacttgaatttttctgtagat 51476705  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtga 216  Q
    |||||||| || |||| |||||||  |||||| |||||||||||||||||| | |||||||||||  ||||| | ||||||||||||    
T  51476704 tatgatagggctaagtttcaggaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgagcgaaaacgtga 51476618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 7791798 - 7791938
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  ||||| |||  ||||| || |||  ||||||||| |||||||||    
T  7791798 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagactatgtgaggtttggggaaaat-gatccttgggatggttgagacttgaaattgctgtagat 7791895  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggca 172  Q
    || ||||||||||||||||||||  ||||||||||||||||||    
T  7791896 taagatagagccaagtgtcaggagcgtgtaggcgaaaacggca 7791938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 18060220 - 18060406
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  18060220 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 18060318  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  18060319 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 18060406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 17148330 - 17148185
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   ||||||||||||    
T  17148330 gattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaa 17148232  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    | ||||||||||||| |||||| ||||  ||||| ||||||||||||    
T  17148231 ctgcatcgaaaacggattaacgatttgatttttatgcgcgaaaacgt 17148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 21858997 - 21858901
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  21858997 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 21858901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 17004339 - 17004245
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  17004339 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 17004245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 39061118 - 39060977
Alignment:
Q  69 gattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaa 167  Q
    ||||||||||||||| |||||||  ||| ||||| || |||  ||||| |||  ||||||||||||||||||  |||||||||||  |||||||||||||    
T  39061118 gattatgtgaggttttggaaaata-attcttgggatggttgagacttggaatttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaa 39061020  T
Q  168 cggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    || |||| ||| | | ||||| ||||| |||||||||||||||    
T  39061019 cgacatcaaaatctgattaacagtttgaattttacgcgcgaaa 39060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 16656435 - 16656271
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 153  Q
    |||||| || ||| ||||||||||||||| ||||||| |||||||||| |  |||  || ||||||  |||||||||| | ||||| ||||||||| ||     
T  16656435 ttttgccaataagtgattatgtgaggttttggaaaat-gatttttgggatcgttgaaacatgaaatttctgtagattaagttagagtcaagtgtcatgag 16656337  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
     ||||||||||||||| ||||  || | | ||||||||||| |||||||||||||||  |||||||    
T  16656336 cgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 16656271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 20825463 - 20825578
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   |||||||||||||| |||||||||||| |||||||||||  ||||| |||||||||||| | || | |||||    
T  20825463 attatgatagtgctaagtgttaggagcatgtaggcgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaa 20825561  T
Q  228 actgttgttgtctgtca 244  Q
     ||| ||||||||||||    
T  20825562 tctgatgttgtctgtca 20825578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 38055552 - 38055738
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  38055552 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 38055650  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  38055651 tgttagagtcaagtgtcaagatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 38055738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 44035523 - 44035619
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  ||||||| ||||||| |||| ||| | | ||| ||||||| |||||||||||||||  |||||||    
T  44035523 tgtagattatgttagagtcaagtgtcaggagcgtgtaggtgaaaacgacatcaaaatccgattagcggtttgaattttacgcgcgaaatggtgaaaa 44035619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 7791949 - 7792032
Alignment:
Q  137 gagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||  |||||||||||||||||| | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  7791949 gagccaagtgtcaggagcgtgtaggcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 7792032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 27330450 - 27330545
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||| ||||||||||| ||||| |||||  ||||| |||||||||||||||    
T  27330450 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggtatcgaaaacggattaacagtttgatttttatgcgcgaaaacgtgaa 27330545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 35054294 - 35054239
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaac 212  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||| ||||||||||    
T  35054294 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaac 35054239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 25752 - 25952
Alignment:
Q  26 ttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctg 124  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| || || |||  ||||||| |   |||    
T  25752 ttatgcttgaaaagtcgaagtctaaacgtttttgcaaataagagattatgtgaggttttggaaatcgattttttgg-tggttgaaacttgaatttttctg 25850  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattgga 224  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||    
T  25851 tagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaaggttgga 25950  T
Q  225 aa 226  Q
    ||    
T  25951 aa 25952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 7500 - 7304
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||  ||||||| |      
T  7500 gaatttacgcttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatttt 7402  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
     ||||||||||||||||| | |||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  7401 tctgtagattatgatagatctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaatggtttggattttacgcacgaaaacgtgaaa 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 7670 - 7476
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 124  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||  ||  ||||||||||||||    
T  7670 tttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggtaaatcgatttt-ggaatgggtgagacttgaaatagctg 7572  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||||  |||||||  ||||||  ||||||||    
T  7571 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaat 7476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 12284 - 12090
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 124  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||  ||  ||||||||||||||    
T  12284 tttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggtaaatcgatttt-ggaatgggtgagacttgaaatagctg 12186  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||||  |||||||  ||||||  ||||||||    
T  12185 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaat 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 4116 - 3978
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4116 ctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaatt 4017  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| | |||||||||||||| |||||| ||||    
T  4016 ggaaaatctgatattgtctgtcaggcataaatcggacta 3978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 8730 - 8592
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8730 ctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaatt 8631  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| | |||||||||||||| |||||| ||||    
T  8630 ggaaaatctgatattgtctgtcaggcataaatcggacta 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 10279 - 10085
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 124  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||  ||  ||||||||||||||    
T  10279 tttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttggtaaatcgatttt-ggaatgggtgagacttgaaatagctg 10181  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||||  |||||||  ||||||  ||||||||    
T  10180 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacggtttaaattttacatgcgaaatggtgaaaat 10085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 6724 - 6586
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6724 ctgtacattaagatagggctaagtgtcaagagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaatt 6625  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| | |||||||||||||| |||||| ||||    
T  6624 ggaaaatctgatattgtctgtcaggcataaatcggacta 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 843 - 1038
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |  || |||  ||||||| |      
T  843 gaatttatgtttgaaaagttggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatagatttttagt-tggttgaaacttgaatttt 941  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  942 tctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttattcgcgaaaacgtgaa 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 52018 - 51831
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||   ||||||||| || |||  ||||||||||||| |||||||    
T  52018 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaataatttttgggatggttgagacttgaaatagctttagatta 51920  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | | ||||||||| | |||||||||||||||  ||||||||    
T  51919 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcgaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 51831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 243
Target Start/End: Original strand, 14931364 - 14931573
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||  ||||||| |   || ||||||    
T  14931364 ttgaaaagtcggagtctaaacgtttt-gcaaataagagattatgtgaggtttggaaaatcgatttttggg-tggttgaaacttgaatttttctatagatt 14931461  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    ||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||  |||| ||| ||    
T  14931462 atgatagagccaagtgtcaggagcgggtaggcgaaaacggcatcaaaaacgggttaacggtttggtttttacgcgtgaaaacgtgaaggttgg-aaatct 14931560  T
Q  231 gttgttgtctgtc 243  Q
    | |||||||||||    
T  14931561 gatgttgtctgtc 14931573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 10705551 - 10705357
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 124  Q
    |||||| ||||||||||  || |||||||||||| |||||||||||||||| ||||||||| ||||||||||| || ||| |||  ||||||||||| ||    
T  10705551 tttatgcttgaaaagtcagaggctaaacgtttttccaaacaagagattatgggaggtttgggaaatcgatttt-ggagtggttgagacttgaaatagttg 10705453  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  10705452 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 10705357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 10919321 - 10919127
Alignment:
Q  25 tttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctg 124  Q
    |||||| ||||||||||  || |||||||||||| |||||||||||||||| ||||||||| ||||||||||| || ||| |||  ||||||||||| ||    
T  10919321 tttatgcttgaaaagtcagaggctaaacgtttttccaaacaagagattatgggaggtttgggaaatcgatttt-ggagtggttgagacttgaaatagttg 10919223  T
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  10919222 tagattatgatagagccaagtgtcaggagagtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaat 10919127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 15991078 - 15990891
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  |||||||||||||||||||||    
T  15991078 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctgtagatta 15990980  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||| | | ||||||||| | ||||||||| |||||  ||||||||    
T  15990979 tgatagagccaagtgtcaggagagtgtagccgaaaacggcatcaaaatccgattaacggttggaattttacgcacgaaatggtgaaaat 15990891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 2584376 - 2584607
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||||||||||||| || |||  ||||||| |      
T  2584376 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttgaaacttgaatttt 2584472  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  2584473 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgtaaatgggttaacggtttggattttacgcgcgaaaacgtgaaaat 2584572  T
Q  221 tggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    | ||||| ||| ||||||| |||  ||||||||||    
T  2584573 tagaaaatctgatgttgtcagtcgagcagaaatcg 2584607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 4830389 - 4830620
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||| ||||||||| || |||  ||||||| |      
T  4830389 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcaatttttggg-tggttgaaacttgaatttt 4830485  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  4830486 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacgtgaagat 4830585  T
Q  221 tggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    | ||||| ||| |||||||||||  ||||||||||    
T  4830586 tagaaaatctgatgttgtctgtcgagcagaaatcg 4830620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 4833684 - 4833915
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||| ||||||||| || |||  ||||||| |      
T  4833684 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcaatttttggg-tggttgaaacttgaatttt 4833780  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  4833781 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacgtgaagat 4833880  T
Q  221 tggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    | ||||| ||| |||||||||||  ||||||||||    
T  4833881 tagaaaatctgatgttgtctgtcgagcagaaatcg 4833915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 9870687 - 9870875
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  ||||||||||||||||||  ||| ||||||||||||||||| |||  |||| || || |  |||  |||||||||||||||||||||    
T  9870687 ttgaaaagtcggtgtctaaacgtttttgcaagtaagggattatgtgaggtttgggaaaatgattcttaggattgttgagacttgaaatagctgtagatta 9870786  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||| || |||||||||||| |||| |||||||||||||||| ||| | | ||||||||||| |||||||||||||||  ||||||||    
T  9870787 tgatatagtcaagtgtcaggagagtggaggcgaaaacggcatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaat 9870875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 13447319 - 13447132
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 153  Q
    |||| |||| ||| |||||||||||||||   ||||||||||||||| || |||  ||||||| |   ||||||||||||||||||  |||||||||||     
T  13447319 ttttacaaataagcgattatgtgaggttttagaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagagataagtgtcaggag 13447221  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgt 242  Q
     |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  13447220 cgtgtaggcgaaaacggcatcaaaaatgggttaacagtttggattttacgcgcgaaaacgtgaaaattagaaaatctgatgttgtctgt 13447132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 6512434 - 6512256
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| || |||  ||||||| |   |||||||||    
T  6512434 ttgaaaaatcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 6512337  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    |||||||||| |||| ||||||   | ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6512336 atgatagagctaagtttcaggagcatataggcgaaaacggcatcgaaaacgggttaacggtttggattctacgcgtgaaaa 6512256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 253
Target Start/End: Complemental strand, 18230551 - 18230331
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  | |||| |||||||||| || |||  ||||||| |   |||||||||    
T  18230551 ttgaaaactcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaattgatttttggg-tggttgaaacttgaatttttctgtagatt 18230454  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    | |||||||| |||||||||||  || |||||||||||| |||||||||||||||||||  |||||||||| | |||||||||||||||||  |||| ||    
T  18230453 acgatagagctaagtgtcaggagcgtttaggcgaaaacgacatcgaaaacgggttaacgcattggattttaagtgcgaaaacgtgaaaattaaaaaatct 18230354  T
Q  231 gttgttgtctgtcaggcagaaat 253  Q
    | |||||||||||  ||||||||    
T  18230353 gatgttgtctgtcgagcagaaat 18230331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 15214108 - 15214226
Alignment:
Q  92 gatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggt 191  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| | | ||||||||    
T  15214108 gattcttgggatggttgtaacttgaaatatctgtagattatgatagagccaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggt 15214207  T
Q  192 ttggattttacgcgcgaaa 210  Q
    ||| |||||||||||||||    
T  15214208 ttgaattttacgcgcgaaa 15214226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 5682987 - 5683173
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgagg-tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || |||||| |||||||||||| |||||||||| ||||||||||  |||||  || ||||||  ||||||||||    
T  5682987 tgaaatgtcgaggtttaagcgttttcgccaacaagtgattatgtgaggttttggaaaat-gatttttgggaagattgaaacatgaaatttctgtagatta 5683085  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| |||||||||||  ||||||||||||||||| || ||| | | ||||||||||| |||||| ||||||||  |||||||    
T  5683086 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggcgtcaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 5683173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 15368343 - 15368180
Alignment:
Q  30 gattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtaga 128  Q
    ||||||| |||||  ||||||||||||| ||||| |||| |||||||||||||||| || |||||||||||| || |||  |||||||  |   ||||||    
T  15368343 gattgaatagtcggcgtctaaacgtttt-gcaaataagaaattatgtgaggtttggcaagtcgatttttggg-tggttgaaacttgaatctttttgtaga 15368246  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 194  Q
    ||||||||| || |||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  15368245 ttatgatagggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacggtttg 15368180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 22354476 - 22354305
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || ||    
T  22354476 gtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaa 22354379  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  22354378 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttaagagcgaaaacgtgaa 22354305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 4615381 - 4615485
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||||||||||||||||| ||||||||||   ||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||  ||    
T  4615381 ctgtagattatgatagagctaagtgtcaggtgcgtgtaggcgaaaacggcatcgaagacgagttaacggtttggtttttatgcgcgaaaacgtgaaggtt 4615480  T
Q  222 ggaaa 226  Q
    |||||    
T  4615481 ggaaa 4615485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 14281060 - 14280875
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag--ctgtagat 129  Q
    ||||| |||||  ||||||| |||||||||||  || ||||||||||||||| | ||| ||||||||||| || |||  ||| |||||    ||||||||    
T  14281060 ttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccgatttttggg-tggttgaaact-gaaatttttctgtagat 14280963  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    | ||||||||| | |||||||||  | ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  14280962 tgtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 14280875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 32 - 216
Target Start/End: Complemental strand, 16224190 - 16224007
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    ||||| |||||  ||||||||||||| | ||| ||||||||||||||||||||| ||||||| ||||||| || |||  |||||||  |   ||||||||    
T  16224190 ttgaatagtcggtgtctaaacgttttgg-aaataagagattatgtgaggtttgggaaatcgagttttggg-tggttgaaacttgaatctttttgtagatt 16224093  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtga 216  Q
    ||||||| || |||||||||||  |||||| |||||||| ||||||||||||||||||||||||  ||||| |  |||||||||||    
T  16224092 atgatagggctaagtgtcaggagcgtgtagacgaaaacgacatcgaaaacgggttaacggtttgatttttatgtccgaaaacgtga 16224007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 3338182 - 3337994
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  |||||||| || ||||||| ||| || |||||||||||||| |||  |||  ||| | || |||  |||| |||| |||||||||||    
T  3338182 ttgaaaagtcggtgtctaaacattcttgcaaataagggactatgtgaggtttgggaaaatgatccttgagatggttgagactttaaattgctgtagatta 3338083  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||||  ||||| |||||||||||| | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  3338082 agatagagccaagtgtcaggagcgtgtaagcgaaaacggcaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 3337994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 54798236 - 54798331
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||| ||||||||| | |||||||||  | ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  54798236 ctgtagattgtgatagagctatgtgtcaggagcgcgtaggcgaaaacggcatcgaaaacgggttaacggtttgttttttaggcgcgaaaacgtgaa 54798331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 15374142 - 15373958
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||| || |||  |||||||  |   | ||||||    
T  15374142 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcaatttttggg-tggttgaaacttgaatctttttatagatt 15374045  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||  || |||||||||||| ||||||| ||||||||||||||||||||||||||  ||||  ||||| |  ||||||||||||    
T  15374044 atgataaggctaagtgtcaggaacgtgtaggtgaaaacggcatcgaaaacgggttaaccatttgatttttatgtccgaaaacgtgaa 15373958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 20898987 - 20899171
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||| |||| |||||||||| | | ||||||||||||| || |||   |||||| |   || ||||||    
T  20898987 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattgtgtgaggttttggagatcgatttttggg-tggttgaagcttgaatttttctatagatt 20899084  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||| ||| ||  || |||||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||    
T  20899085 atgatagagctaagtttcatgagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 20899171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 7132559 - 7132704
Alignment:
Q  69 gattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaac 168  Q
    ||||||||||||||| |||||  || ||||||| || |||  || ||||||   ||||||||||||||| ||||||||| ||||   |||||||||||||    
T  7132559 gattatgtgaggttttgaaaaatgacttttgggatggttgaaacatgaaatttttgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaac 7132658  T
Q  169 ggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    || ||||||||||| |||||||||||  ||||| ||||||||||||    
T  7132659 ggtatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 7132704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 16157515 - 16157422
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||||| || | || ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  16157515 gtagattatgatagtgctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaa 16157422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 20000502 - 20000340
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||| |||||||||| ||||||||| ||    
T  20000502 cgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtaaattatgatagtgccaagtgttag 20000404  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||   ||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  20000403 gagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 20000340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 27028535 - 27028376
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||| ||| ||||||| ||||| ||||| ||||||||| || |||  ||||||| |   ||||||||||||||||||| |||||||||||     
T  27028535 ttttgcaaataagggatcatgtgagttttgggaaatcaatttttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggag 27028437  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     || |||||||||||||||||||||||||||   |||||||  ||||| | |||||||||||||    
T  27028436 cgtttaggcgaaaacggcatcgaaaacgggt---cggtttgatttttatgtgcgaaaacgtgaa 27028376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 15371850 - 15371712
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 130  Q
    ||||| |||||  ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||  |||  |||||||  |   ||||||||    
T  15371850 ttgaatagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgattttttgggtagttgaaacttgaatctttttgtagatt 15371752  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacgg 170  Q
    ||||||| || |||||||||||  ||||||||||||||||    
T  15371751 atgatagggctaagtgtcaggagcgtgtaggcgaaaacgg 15371712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 18168766 - 18168580
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  18168766 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 18168668  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||  |||||||||||||||| ||| |||   | |||||||||||||||||||||||||||  |||||||    
T  18168667 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacggtatcaaaatttgattaacggtttggattttacgcgcgaaatggtgaaaa 18168580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 18293412 - 18293506
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  18293412 tagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 18293506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 244
Target Start/End: Original strand, 30233215 - 30233336
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||||||||  ||||| ||||||||||||||| |||    
T  30233215 ctgtacattaagatagggctaagtgtcaagaacatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtgaagatt 30233314  T
Q  222 ggaaaaactgttgttgtctgtca 244  Q
     ||||| ||| || |||||||||    
T  30233315 -gaaaatctggtgctgtctgtca 30233336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 54363742 - 54363907
Alignment:
Q  54 tttttgcaaacaagagattatgtgagg-tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagga 152  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||||| || |||  |||||||||  || |||||||||||||||| |||||||| ||    
T  54363742 tttttgccaataagtgattatgtgaggttttggaaaat-aatttttgggatggttgaaacttgaaatttctatagattatgatagagctaagtgtcacga 54363840  T
Q  153 aagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
      |||||||||||||||||||| ||| |   ||||||||||| |||||| |||| |||  |||||||    
T  54363841 gcgtgtaggcgaaaacggcatcaaaatccaattaacggtttgaattttatgcgcaaaatggtgaaaa 54363907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 45314379 - 45314500
Alignment:
Q  81 tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaac 180  Q
    |||||||||| |||||||||| || |||  |||||||||  ||||||||||||||||||  |||| ||||||  ||||||||||||||| |||| ||| |    
T  45314379 tttggaaaat-gatttttgggatggttgagacttgaaatttctgtagattatgatagagttaagtatcaggatcgtgtaggcgaaaacgacatcaaaatc 45314477  T
Q  181 gggttaacggtttggattttacg 203  Q
     | ||||||||||| ||||||||    
T  45314478 cgattaacggtttgaattttacg 45314500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 15403263 - 15403193
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttg 194  Q
    ||||||||||||||| || |||||||||||  ||||||||||||||| ||||||||||||| ||||||||||    
T  15403263 tgtagattatgatagggctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacggg-taacggtttg 15403193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 52266227 - 52266322
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| |||| ||||| || |||||||| |||  |||||| ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||    
T  52266227 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacgacatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtgaa 52266322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 13043296 - 13043384
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    ||||||||||||||||||  |||||| | ||  | |||||| ||||||||||||||||||| ||||  ||||||||||||||| |||||    
T  13043296 ctgtagattatgatagagttaagtgttaagagcgcgtaggcaaaaacggcatcgaaaacggattaatagtttggattttacgcacgaaa 13043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 25119760 - 25119854
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||  ||||| ||||||||||||  |||||||||||||| ||||| ||| | | ||||||||||  |||||||||||||||  |||||||    
T  25119760 tagattattttagagtcaagtgtcaggagcgtgtaggcgaaaactgcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaa 25119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 26921804 - 26921886
Alignment:
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaac 212  Q
    |||||||| || ||||||||||||  |||||| ||||||| |||||||||| | |||||||||||  ||||| ||||||||||    
T  26921804 tatgatagtgctaagtgtcaggaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatttttatgcgcgaaaac 26921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 8574316 - 8574360
Alignment:
Q  173 tcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||    
T  8574316 tcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 8574360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 15852063 - 15852157
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||| |||| ||||| || |||||||| |||  |||||| |||||||||||||||||||| |||||  ||||  ||||| |||| |||| |||||    
T  15852063 tgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacggcatcgaaaacggattaacaatttgatttttatgcgcaaaaatgtgaa 15852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16157583 - 16157538
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg 100  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  16157583 ttttgcaaataagagatgatgtgagttttgggaaatcgatttttgg 16157538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 201
Target Start/End: Original strand, 19622549 - 19622693
Alignment:
Q  58 tgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaaag 155  Q
    |||||| ||| ||||||||||||||| ||||||| |||||||||| || |||  |||| || |   || |||||||||||||||  |||||| | ||  |    
T  19622549 tgcaaataagtgattatgtgaggttttggaaaat-gatttttgggatggttgaaacttcaatttttctatagattatgatagagttaagtgttaagagcg 19622647  T
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggatttta 201  Q
    |||||||||||||| |||| ||| | | ||||||||||| ||||||    
T  19622648 tgtaggcgaaaacgacatcaaaatccgattaacggtttgaatttta 19622693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 7086 - 6898
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| |||  |||| ||||| || |||  ||||||||| | |||||||||    
T  7086 ttgaaaagtcggtgtctaaacgtttttccaaataagggattatgtgaggtttgggaaaatgattcttgggatggttgagacttgaaattgttgtagatta 6987  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  6986 tgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggttaacggtttgaattttacgcgcgaaatggtgaaaat 6898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 244
Target Start/End: Original strand, 1530 - 1717
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||  || |||  ||||||  |   | ||||||||||||||||| |||| ||||||     
T  1530 ttttgcaaataagagatcatgtgagttttgggaaatcgatttttgg--tggttgaaacttgagtttttcggtagattatgatagagctaagtctcaggag 1627  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtca 244  Q
     ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||||  || ||||| ||| ||||||||||||    
T  1628 cgtgtaggcgaaaatggcatcgaaaacgggttaacggtttgggttttatgcgcgaaaatgtgaaggtt-gaaaatctgatgttgtctgtca 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 243
Target Start/End: Original strand, 8952278 - 8952487
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| || || |||  ||||||| |   |||||||||    
T  8952278 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttagg-tggttgaaacttgaatttttctgtagatt 8952375  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||| ||| ||    
T  8952376 atgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaaggttgg-aaatct 8952474  T
Q  231 gttgttgtctgtc 243  Q
    | |||||||||||    
T  8952475 gatgttgtctgtc 8952487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 255
Target Start/End: Original strand, 22357141 - 22357362
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| ||| ||||||||||||||  | ||||||||||||||| || |||  ||||||| |   ||||||| |    
T  22357141 ttgaaaaatcggtgtctaaacgtttt-gcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggttgaaacttgaatttttctgtagaat 22357238  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
     ||||||||  |||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  22357239 -tgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgagttaacggtttggattttacgcgcgaaaacgtgaaaattagaaaatct 22357337  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | |||||||||||  ||||||||||    
T  22357338 gatgttgtctgtcgagcagaaatcg 22357362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 225
Target Start/End: Original strand, 21311139 - 21311332
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||| ||||||||||| ||| ||||||||||||||  | ||||||||||||||| || | |  |||| || |   |||||||||    
T  21311139 ttgaaaagtcggtgtctaaaagtttttgcaaataagtgattatgtgaggttctggaaatcgatttttggg-tggtcgaaactttaatttttctgtagatt 21311237  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaa 225  Q
    |||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  21311238 atgatagagctaagtgtcaggagcgtataggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacatgaaaattggaa 21311332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 23539586 - 23539355
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 120  Q
    ||||||||| |||||||||||  |||  |||| ||||||||| ||| ||||||||||||||  | ||||| |||||| ||||| |||  |||||||  ||    
T  23539586 gaatttatgtttgaaaagtcggtgtc-caacg-ttttgcaaataagtgattatgtgaggttctggaaatcaattttt-gggtggttgaaacttgaattta 23539490  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| | ||    
T  23539489 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaatgggataacggtttggattttacgcgcaaaaacgtgtagat 23539390  T
Q  221 tggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    | ||||| ||| |||||||||||  ||||||||||    
T  23539389 tagaaaatctgatgttgtctgtcgagcagaaatcg 23539355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 32 - 255
Target Start/End: Complemental strand, 10817621 - 10817399
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||||| |||  ||||||||||||| ||||| |||  ||||| |||||||  | ||||||||||||||| || |||  ||||||| |   || ||||||    
T  10817621 ttgaaaaatcggcgtctaaacgtttt-gcaaataagtaattatatgaggttctggaaatcgatttttggg-tggttgaaacttgaatttttctatagatt 10817524  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaact 230  Q
    |||||||||| |||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||| ||    
T  10817523 atgatagagctaagtgtcaggagcgtgtaggcgaaaagggcatcgaaaatgggttaacggtttggattttacgcgtgaaaacgtgaagattagaaaatct 10817424  T
Q  231 gttgttgtctgtcaggcagaaatcg 255  Q
    | ||||||||||| |||||||||||    
T  10817423 gatgttgtctgtcgggcagaaatcg 10817399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 225
Target Start/End: Original strand, 21297596 - 21297789
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||| |||||  | ||||||||||||||| || |||  |||| || |   ||| |||||    
T  21297596 ttgaaaagtcgctgtctaaacgtttttgcaaataagtgattatgtaaggttctggaaatcgatttttggg-tggttgaaactttaatttttctggagatt 21297694  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaa 225  Q
    |||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  21297695 atgatagagctaagtgtcaggagcgtgtaggcgaaaacgacatcgaaaacgggttaacagtttggattttatgcgcgaaaacatgaaaattggaa 21297789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 22777320 - 22777512
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||  | |||  |||||||  |  ||||||||||||||||||  ||    
T  22777320 gtctaaacgtttt-gcaaataagagattatgtgaggtttgggaaatcgatttttgggcgg-ttgaaacttgaatctttctgtagattatgatagagttaa 22777417  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgt 238  Q
    |||||| ||  ||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||| ||||| ||| ||||||    
T  22777418 gtgtcatgagcgtgtaggcgaaaacggcatcgaaaacgggataacagtttgaattttatgcgcgaaaacgtgaaaattagaaaatctgatgttgt 22777512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 22470640 - 22470453
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||  |||||||||| || |||  ||||||||||||| |||||||    
T  22470640 ttgaaaagtcgaagtataaacgtttt-gcaaataagagattatgtgaggtttgggaaaatgatttttgggatggttgagacttgaaatagctatagatta 22470542  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||| ||||||||||||| |||||||| ||||||| |||||||| | | |||| |||| | |||||||  ||||||  ||||||||    
T  22470541 tgatagaaccaagtgtcaggagagtgtaggagaaaacgacatcgaaatccgattaatggttggaattttacctgcgaaatggtgaaaat 22470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 21405937 - 21406074
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattg 222  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||  || ||||||||||||||  ||| |||| ||||||||||||||||| |||||    
T  21405937 tgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacgaaattgaaaacgggttaacaatttagattctacgcgcgaaaacgtgacaattg 21406036  T
Q  223 gaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    ||||| ||| |||||||||||||| |||||||| ||||    
T  21406037 gaaaatctgatgttgtctgtcagggagaaatcggacta 21406074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 40726488 - 40726317
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 143  Q
    ||||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||| || ||   ||||||| |   || ||||||||||||| || ||    
T  40726488 gtctaaacgtttt-gcaaataagtgattatgtgaggttttggaaaccgatttttggg-tggtttaaacttgaatttttctatagattatgatagggctaa 40726391  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  40726390 gtgtcaggagcgtttaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgagcgaaaacgtgaa 40726317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 22007217 - 22007310
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||||| || | || ||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  22007217 gtagattatgatagtgctatgtctcatgagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaa 22007310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 18318537 - 18318629
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||| ||||||||| |||||||||||  | |||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||    
T  18318537 tagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaacaggttaacggtttgatttttaggcgcgaaaacgtgaa 18318629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 20765583 - 20765678
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||| ||||||||| |||||||||||  | ||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  20765583 ctgtagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaacggcatcgaaaaggggttaacggtttgatttttaggcgtgaaaacgtgaa 20765678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 10778428 - 10778614
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| | ||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  10778428 tgaaatgtcgatgtttaagcgttttcgccaataagtgcttatgtgaggtttaggaaaat-gagttttgggatggttgagacatgaaatttttgtagatta 10778526  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||| ||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  10778527 tgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 10778614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 21399063 - 21399220
Alignment:
Q  53 gtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagg 151  Q
    |||||||| || ||| ||||||||||||||| || |||| |||| ||||| || |||  |||||||||  ||||||||||||||| |   ||||||||||    
T  21399063 gtttttgccaataagtgattatgtgaggttttgggaaat-gattcttgggatggttgagacttgaaatttctgtagattatgataaacttaagtgtcagg 21399161  T
Q  152 aaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    |  ||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||    
T  21399162 agcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaa 21399220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 1220070 - 1220166
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||| ||  |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  1220070 tgtagattatgttagagtcaagtgtcaagagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 1220166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 9730932 - 9731020
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    ||||||||||||||| ||||||||| ||||   |||||||||||||||| |||||||||| |||||||||||  ||||| |||||||||    
T  9730932 tgtagattatgatagtgccaagtgttaggagcatgtaggcgaaaacggcgtcgaaaacggattaacggtttgatttttatgcgcgaaaa 9731020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 20197656 - 20197764
Alignment:
Q  111 acttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    |||||||||  ||||||||||||||||||  |||||||||||  |||||||||||||||||| | ||| | | ||||||||||  |||||||||||||||    
T  20197656 acttgaaatttctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcaacaaaatccgattaacggtttaaattttacgcgcgaaa 20197755  T
Q  211 acgtgaaaa 219  Q
      |||||||    
T  20197756 tggtgaaaa 20197764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 22883546 - 22883732
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| || |||| || ||||||| || |||  || ||||||   | |||||||    
T  22883546 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttgggaaat-gacttttgggatggttgaaacatgaaatttttatagatta 22883644  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  22883645 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 22883732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 35581737 - 35581643
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  35581737 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaa 35581643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 36990325 - 36990419
Alignment:
Q  125 tagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  36990325 tagattatgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaa 36990419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 28901988 - 28901824
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 153  Q
    |||||| || ||| ||||||||||||||| ||||||| |||||||||| |  |||  || ||||||  |||||||||| | ||||| ||||||||| ||     
T  28901988 ttttgccaataagtgattatgtgaggttttggaaaat-gatttttgggatcgttgaaacatgaaatttctgtagattaagttagagtcaagtgtcatgag 28901890  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
     ||||||||||||||| ||||  || | | ||||||||||| |||||||||||||||  |||||||    
T  28901889 cgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 28901824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 28938383 - 28938219
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaa 153  Q
    |||||| || ||| ||||||||||||||| ||||||| |||||||||| |  |||  || ||||||  |||||||||| | ||||| ||||||||| ||     
T  28938383 ttttgccaataagtgattatgtgaggttttggaaaat-gatttttgggatcgttgaaacatgaaatttctgtagattaagttagagtcaagtgtcatgag 28938285  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
     ||||||||||||||| ||||  || | | ||||||||||| |||||||||||||||  |||||||    
T  28938284 cgtgtaggcgaaaacgacatcataatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 28938219  T

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Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 21932843 - 21933029
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  21932843 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 21932941  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||| ||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  21932942 tgttagagtcaagtgtcaggatcatgtaggtgaaaacagcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 21933029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 21939013 - 21939199
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  21939013 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 21939111  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||| ||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  21939112 tgttagagtcaagtgtcaggatcatgtaggtgaaaacagcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 21939199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 21204470 - 21204384
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||||||| || |||||| ||||   |||||| |||||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  21204470 attatgatagtgctaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt 21204384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 23514265 - 23514179
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaa 209  Q
    ||||||||||  ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| |||||||| |||||    
T  23514265 tgtagattatcttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgtgcgaa 23514179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 21405870 - 21405935
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttt 97  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||  |||||||||||||    
T  21405870 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttctgaaaatcgatttt 21405935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 21109444 - 21109349
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||| ||| |||||| || ||||||||||||  |||||| ||||||| |||||||||| | |||||||||||   |||| |||||||||||||||    
T  21109444 ctgtacattgtgatagggctaagtgtcaggaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatatttatgcgcgaaaacgtgaa 21109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 432171 - 432105
Alignment:
Q  133 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattt 199  Q
    |||||||| |||||| ||||| | |||| ||||||||| ||||||  ||| ||||||||||||||||    
T  432171 gatagagctaagtgtaaggaacgcgtagacgaaaacggaatcgaagtcggattaacggtttggattt 432105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 21650213 - 21650155
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    ||||| ||||||| |||| ||||||| |||||||||||  ||||| |||||||||||||    
T  21650213 gtaggtgaaaacgacatcaaaaacggattaacggtttgatttttatgcgcgaaaacgtg 21650155  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 20711626 - 20711537
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaa 211  Q
    ||||| |||| ||||| || |||||||| |||  |||||| ||||||| |||||||||| | |||||||||||  ||||| ||| |||||    
T  20711626 ctgtacattaagatagggctaagtgtcatgaacatgtaggtgaaaacgacatcgaaaacagattaacggtttgatttttatgcgtgaaaa 20711537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 22111687 - 22111598
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| || ||||| ||| ||  ||| || |||||||||||||||||| | ||||||| |||  ||||| | |||||||||||||    
T  22111687 attatgatagtgctaagtgccagaaacatgtgggtgaaaacggcatcgaaaacagattaacggattgatttttatgtgcgaaaacgtgaa 22111598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 2227 - 2447
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| || || |||  ||||||| |      
T  2227 gaatttatgcttgaaaagtcgaagtctaaacgtttttgaaaataagagattatgtgaggtttgggaaatcaatttttagg-tggttgaaacttgaatttt 2325  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     || |||||||||||||||| |||||| ||||   |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||  |    
T  2326 tctatagattatgatagagctaagtgtaaggagcatgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgagaaaacgtgaaggt 2425  T
Q  221 tggaaaaactgttgttgtctgtc 243  Q
    ||| ||| ||| |||||||||||    
T  2426 tgg-aaatctgatgttgtctgtc 2447  T

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Target: scaffold0021 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 147443 - 147212
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag 121  Q
    ||||||||| |||||||||||  ||| || |||||| ||||| ||| ||||||||||||||  | ||||||||| ||||| || |||  ||||||| |      
T  147443 gaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaaatcgattgttggg-tggttgaaacttgaatttt 147347  T
Q  122 -ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  147346 tctgtagattatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttatgcgcgaaaacgtgaagat 147247  T
Q  221 tggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    | ||||| ||| |||||||||||  ||||||||||    
T  147246 tagaaaatctgatgttgtctgtcgagcagaaatcg 147212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 87845 - 87752
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    ||||| |||| ||||| || |||||||| |||   ||||| |||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  87845 ctgtacattaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 87752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 146148 - 146015
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| ||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  146148 ctgtacattaagatagggctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgaaaacgtgaaaatt 146049  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    |||||| ||| |||||||||||||||||||||||    
T  146048 ggaaaatctgatgttgtctgtcaggcagaaatcg 146015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 626 - 814
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || ||   |||||||||||||||||||||    
T  626 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatggttcagacttgaaatagctgtagatta 725  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| | | |||||  |||| |||||||||||||||  ||||||||    
T  726 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaatccgattaacaatttgaattttacgcgcgaaatggtgaaaat 814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 16340 - 16526
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggg-gtgattgtcacttgaaatag-ctgtagat 129  Q
    |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  | ||| |||  ||||||| |   ||||||||    
T  16340 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagattatgtgaggtttggaaaatcgatttttttgtgtggttgaaacttgaatttttctgtagat 16438  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||    
T  16439 tatgatagagctaagtgtcaggagcgtgtaggcgaaaacggtatcgaaaacggattaacggtttggtttttatgcgcgaaaacgtgaa 16526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 10995 - 11184
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||| ||||  ||||||||||    
T  10995 ttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaatgattcttgggatgtttgatacttaaaatttctgtagatta 11094  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaa-acgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||  | | ||||||||||| |||||||||||||||  ||||||||    
T  11095 tgatagagccaagtgtcaggagagtgtaggcgaaaacggcatcaaaattccgattaacggtttgaattttacgcgcgaaatggtgaaaat 11184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 5277 - 5464
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||  ||||||||||    
T  5277 ttgaaaagtcggtgtctaaacgtttttacaaataagggattatgtgaggtttgggaaaatgattcttgggatgtttgagacttgaaatttctgtagatta 5376  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||| | | ||||| ||||| |||||||||||||||  |||||||    
T  5377 tgatagagccatgtgtcaggagagtgtaggcgaaaacggcatcaaaatctgattaacagtttgaattttacgcgcgaaatggtgaaaa 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 1 - 160
Alignment:
Q  60 caaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgta 159  Q
    |||| ||| ||||||||||||||||| |||  |||| ||||| || |||  |||||||||  ||||||||||||||||||||| ||||||||| ||||||    
T  1 caaataagggattatgtgaggtttgggaaaatgattcttgggatgtttgagacttgaaatttctgtagattatgatagagccatgtgtcaggagagtgta 100  T
Q  160 ggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||||||| ||| | | ||||| ||||| |||||||||||||||  |||||||    
T  101 ggcgaaaacggcatcaaaatctgattaacagtttgaattttacgcgcgaaatggtgaaaa 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 3937 - 3716
Alignment:
Q  22 gaatttatgattgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-ata 120  Q
    ||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||  |||||||  |     
T  3937 gaatttatgcttgaaaagtcggagtctgaacgtttttgcaaataagagattatgtgaggtttgggaaatcga-ttttggggtggttgaaacttgaatctt 3839  T
Q  121 gctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
     |||||||||||||||| || |||||||||||   |||||||||||||||||||||||||   ||||||| |||  ||||| |||||||||| ||||  |    
T  3838 tctgtagattatgatagggctaagtgtcaggaccatgtaggcgaaaacggcatcgaaaacacattaacggattgatttttatgcgcgaaaacatgaaggt 3739  T
Q  221 tggaaaaactgttgttgtctgtca 244  Q
    | ||||| ||| ||||||||||||    
T  3738 t-gaaaatctgatgttgtctgtca 3716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 18117 - 18230
Alignment:
Q  142 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctg 241  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||| |||||||||    
T  18117 aagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttacgcgcgtaaacgtgaaaattagaaaatctgatgttgtctg 18216  T
Q  242 tcaggcagaaatcg 255  Q
    ||||||||||||||    
T  18217 tcaggcagaaatcg 18230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 35781 - 35964
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaa-atagctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||||||| ||||||||||||| |||||||| ||| |  || |||  ||||||| ||  |||||||||    
T  35781 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagataatgtgaggtttgggaaatcgatatttaga-tggttgaaacttgaatatttctgtagatt 35878  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtga 216  Q
    |||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  35879 atgatagagataagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtga 35964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 255
Target Start/End: Complemental strand, 928 - 729
Alignment:
Q  56 tttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaagtgtcaggaaa 154  Q
    |||||||| ||| ||||||||||||||  | ||||||||| ||||| || |||  ||||||| |   ||||||||||||||||||| |||||||||||      
T  928 tttgcaaataagtgattatgtgaggttctggaaatcgattgttggg-tggttgaaacttgaatttttctgtagattatgatagagctaagtgtcaggagc 830  T
Q  155 gtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatc 254  Q
    ||||||||||||||| ||||||||||||| || |||||||| |||||||||| |||||||||||||| |||||  || |||||||||||| |||||||||    
T  829 gtgtaggcgaaaacgacatcgaaaacgggctagcggtttggcttttacgcgcaaaaacgtgaaaattagaaaatttgatgttgtctgtcaagcagaaatc 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 16107 - 15991
Alignment:
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 243  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  16107 gtgtcaggagcgtgtaggcgaaaacggcatcgaaaacaggttaacggtttggattttacgcgagaaaacgtgaaaattggaaaatctgatgttgtctgtc 16008  T
Q  244 aggcagaaatcgtacta 260  Q
    | |||||||||| ||||    
T  16007 atgcagaaatcggacta 15991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 5008 - 4944
Alignment:
Q  191 tttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    |||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  5008 tttggattttacgctcgaaaacgtgaaaattggaaaatctgatgttgtctgtaaggcagaaatcg 4944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 11128 - 11066
Alignment:
Q  191 tttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 253  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  11128 tttggattttacgcgcgaaaacatgaaaattggaaaatctgatgttgtctgtaaggcagaaat 11066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 5479 - 5352
Alignment:
Q  133 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgt 232  Q
    |||||||| ||||||||||||  ||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||     
T  5479 gatagagctaagtgtcaggaacatgtaggcaaaaacggcattgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaaaattgaaaaatctga 5380  T
Q  233 tgttgtctgtcaggcagaaatcgtacta 260  Q
    ||||||||||||||||||||||| ||||    
T  5379 tgttgtctgtcaggcagaaatcgaacta 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 1000 - 1096
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  |||| ||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  1000 tgtagattatgttagagtcaagtgtcaggagtgtgtgggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 147086 - 146982
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaatcg 255  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  147086 tgtaggtgaaaacggcatcgaaaacgggttaacgatttggattttacgtgcgaaaacgtgaaaattggaaaatctgatgttgtctgtcaggcagaaatcg 146987  T
Q  256 tacta 260  Q
     ||||    
T  146986 gacta 146982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 751 - 938
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaaatag-ctgtaga 128  Q
    ||||||||||   ||||||||||||||||||| |||| || |||||||||||||||| |||||||||   || || |||  |||| || |   |||||||    
T  751 ttgaaaagtcagtgtctaaacgtttttgcaaataagatatcatgtgaggtttggaaa-tcgattttttttggatggttgaaactttaatttttctgtaga 849  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  850 ttatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcacgaaaacgtgaa 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 7593 - 7688
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  7593 ctgtagattatgatagagctaagtgtcaggagtgtgtaggcgaaaacggcatcgaaaacgggttaacggtttggtttttatgcacgaaaacgtgaa 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 26462 - 26364
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||||||||||||  |||||||||||  |||||||||||||||||||| |||   | ||||||||||| |||||||||||||||  ||||||||    
T  26462 ctgtagattatgatagagttaagtgtcaggagcgtgtaggcgaaaacggcatcaaaattcgattaacggtttgaattttacgcgcgaaatggtgaaaat 26364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 128 - 260
Target Start/End: Original strand, 23216 - 23348
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||| ||||| || |||||||| |||   ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23216 attaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaacggtttggtttttacgcgcgaaaacgtgaaaattggaaaa 23315  T
Q  228 actgttgttgtctgtcaggcagaaatcgtacta 260  Q
      || ||||||||||||||||||||||| ||||    
T  23316 tttgatgttgtctgtcaggcagaaatcggacta 23348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 35288 - 35113
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 144  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||  |||| ||||| || |||  |||||||||  || ||||||||||||||||||||    
T  35288 gtctaaacgtttttgcaaataagggattatgtgaggtttcgaaaaatgattcttgggatggttgagacttgaaatttctatagattatgatagagccaag 35189  T
Q  145 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    |||||||   |||||||||||||||||||| |||   | ||||||||||| ||||||||| |||||  ||||||||    
T  35188 tgtcaggggcgtgtaggcgaaaacggcatcaaaattcgattaacggtttgaattttacgcacgaaatggtgaaaat 35113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 705 - 843
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||| |||||||| |||||||||||  |||||||||||||||||||| ||||||| ||||| |||||| ||||||| || ||||||| ||||||    
T  705 ctgtacattaagatagagctaagtgtcaggagcgtgtaggcgaaaacggcatccaaaacggattaactgtttggtttttacgtgcaaaaacgtaaaaatt 804  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| |||||||||||||||||| |||| ||||    
T  805 ggaaaatctgatgttgtctgtcaggcagatatcggacta 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 3690 - 3503
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttg--gggtgattgtcacttgaa-atagctgtaga 128  Q
    |||||||||||  ||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||   ||||  |||  ||||||| ||  || | ||    
T  3690 ttgaaaagtcggtgtctaaacgtttt-gcaaataagagatcatgtgaggtttgggaaatcgattttttttgggtagttgaaacttgaatatttcttttga 3592  T
Q  129 ttatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||| ||||    
T  3591 ttatgatagagctaagtgtcaggagcgtgtaggcgaaaacggcatcgaaaacgggttaacgatttggtttttatacgcgaaaacatgaa 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 2085 - 2256
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||||||||   ||||||||||||||||||| ||| ||||||||||||||||| |||    || ||||| || |||  ||||||||| |||||||||||    
T  2085 ttgaaaagtcagtgtctaaacgtttttgcaaataagggattatgtgaggtttgggaaaattcttcttgggatggttgagacttgaaattgctgtagatta 2184  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacg 203  Q
    |||||||||||||||||||||  ||||||||||| |||||||| |||   | ||||||||||| ||||||||    
T  2185 tgatagagccaagtgtcaggagcgtgtaggcgaagacggcatcaaaattcgattaacggtttgaattttacg 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 1000 - 817
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| || |||  |||||||  |  |||||||||    
T  1000 ttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaggtttggaaa-tcgatttttggg-tggttgaaacttgaatctttctgtagatt 903  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||| || |||||||||||   |||||| ||||| |||||||||||| | ||||| |||||  ||||| |||||||||||||||    
T  902 atgatagggctaagtgtcaggagcatgtaggtgaaaa-ggcatcgaaaacagattaacagtttgatttttatgcgcgaaaacgtgaa 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 18658 - 18474
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  |||| |||||||| ||||| ||| |||| |||||||||| | | ||||||||||||| || |||  ||||||| |   |||||||||    
T  18658 ttgaaaagtcggtgtctgaacgtttt-gcaaataagtgattgtgtgaggttttggagatcgatttttggg-tggttgaaacttgaatttttctgtagatt 18561  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||| ||||||||||||||  ||||| | |||||||||||||    
T  18560 atgatagagccaagtgtcaggagtgtttaggcgaaaacggcatcgaaaatgggttaacggtttgatttttatgtgcgaaaacgtgaa 18474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 14468 - 14410
Alignment:
Q  156 tgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    |||||| ||||||||||| |||||||| |||||||||||  ||||| ||||||||||||    
T  14468 tgtaggtgaaaacggcatagaaaacggattaacggtttgatttttatgcgcgaaaacgt 14410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 143 - 273
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    |||||||||||| |||||| |||||||||||  |||||||| |||||| |||| |||||||||||||||||||||||||| |        ||||||||||    
T  143 ctgtagattatgttagagctaagtgtcaggagcgtgtaggcaaaaacgacatcaaaaacgggttaacggtttggattttatg--------cgtgaaaatt 234  T
Q  222 ggaaaaactgttgttgtctgtcaggcagaaatcgtacta 260  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  235 ggaaaatctgatgttgtctgtcaggcagaaatcgtacta 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 260
Target Start/End: Original strand, 7250 - 7382
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   |||||| ||||||| ||||||||| || ||||  |||||| |||||||||||||||||||||||||||||||    
T  7250 attatgatagtgctaagtgttaggagcatgtaggtgaaaacgacatcgaaaatggattaaaagtttggtttttacgcgcgaaaacgtgaaaattggaaaa 7349  T
Q  228 actgttgttgtctgtcaggcagaaatcgtacta 260  Q
     ||| ||||||||||||||||||||||| ||||    
T  7350 tctgatgttgtctgtcaggcagaaatcggacta 7382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 8545 - 8379
Alignment:
Q  53 gtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagg 151  Q
    ||||||||||| ||| ||||||||||||||| ||||||| |||||||||| || |||  || ||||||  ||||||| ||||||||||  ||||||||||    
T  8545 gtttttgcaaataagtgattatgtgaggttttggaaaat-gatttttgggatggttgaaacatgaaatttctgtagactatgatagagttaagtgtcagg 8447  T
Q  152 aaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    |  | |||||||||||||||||  ||||| ||||||||||||| |||||||||||||||  |||||||    
T  8446 agcgcgtaggcgaaaacggcatttaaaacaggttaacggtttgaattttacgcgcgaaatggtgaaaa 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 682 - 866
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    ||||| |||||  ||||||||||||| ||||| ||| ||||||||||| ||| | ||||||||||||||| || |||  ||||||| |   || ||||||    
T  682 ttgaagagtcggtgtctaaacgtttt-gcaaataagcgattatgtgagattttggaaatcgatttttggg-tggttgaaacttgaatttttctatagatt 779  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||||  ||||| | |||||||||||||    
T  780 atgatagagctaagtgtcaggagcgtttaggcgaaaacgacatcgaaaacgggttaacggtttgatttttatgtgcgaaaacgtgaa 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 14818 - 14741
Alignment:
Q  176 aaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtcaggcagaaat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  14818 aaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaatatgatgttgtctgtcaggcagaaat 14741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 16171 - 16223
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatc 174  Q
    |||||||||||| ||||| ||||||||| ||  ||||||||||||||||||||    
T  16171 ctgtagattatgttagagtcaagtgtcacgagcgtgtaggcgaaaacggcatc 16223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 94518 - 94393
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||| ||||| || |||||||| |||   ||||| |||||||||||||||||||| |||| ||||||| ||||| ||||||||| |||||||||||||||    
T  94518 attaagatagggctaagtgtcatgaacacgtaggtgaaaacggcatcgaaaacggattaaaggtttggtttttatgcgcgaaaatgtgaaaattggaaaa 94419  T
Q  228 actgttgttgtctgtcaggcagaaat 253  Q
     ||| |||||||||||||||||||||    
T  94418 tctgatgttgtctgtcaggcagaaat 94393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 113209 - 113391
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||| |||  | ||||||||||||||| || |||  ||||||| |   |||||||||    
T  113209 ttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgatgttctggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 113307  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgt 214  Q
    ||||||| || |||||| |||||  |||||| ||||||||||||||||||   |||| |||||| |||||| ||||||||||||    
T  113308 atgatagggctaagtgtgaggaacatgtaggtgaaaacggcatcgaaaacaaattaatggtttgaattttatgcgcgaaaacgt 113391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 244
Target Start/End: Original strand, 118056 - 118254
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagattatgatagagccaa 143  Q
    ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||||||||| || ||    
T  118056 gtctaaacgtttttgcaaataagtgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagattatgatagggctaa 118154  T
Q  144 gtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaaactgttgttgtctgtc 243  Q
    |||| |||||  |||||| ||||||| ||||||||||   |||||||| ||  ||||| ||||||||| |||||  || ||||| ||| |||||||||||    
T  118155 gtgtgaggaacatgtaggtgaaaacgacatcgaaaacaaattaacggtatgatttttatgcgcgaaaatgtgaaggtt-gaaaatctgatgttgtctgtc 118253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 25433 - 25491
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  25433 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtg 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 3703 - 3519
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||| |||| ||||||||||   | | ||||||||||| || |||  ||||||| |   |||||||||    
T  3703 ttgaaaagtcggtgtctaaacgtttt-gcaaataagtgattgtgtgaggttttatacaacgatttttggg-tggttgaaacttgaatttttctgtagatt 3606  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||||||||||  || |||||||||||||||||||||| ||||||||||||||  ||||| | |||||||||||||    
T  3605 atgatagagctaagtgtcaggagcgtttaggcgaaaacggcatcgaaaatgggttaacggtttgatttttatgtgcgaaaacgtgaa 3519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 31103 - 30917
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  31103 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 31005  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  31004 tgttagagtcaagtgtcaggatcgtgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatagtgaaaa 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 8858 - 8765
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||||||  |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  8858 gtagattatgatagagctatgtctcaggagcgtgtagacgaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaa 8765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 6667 - 6613
Alignment:
Q  163 gaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  6667 gaaaacggcatcgaaaacgggttaacggtttggtttttatgcgcgaaaacgtgaa 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 8926 - 8881
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg 100  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  8926 ttttgcaaataagagatcatgtgagttttgggaaatcgatttttgg 8881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 4514 - 4333
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatag-ctgtagatt 130  Q
    |||||||||||  ||||||||||||| ||||| ||| ||||||||||||||| | ||||||||||||||| || |||  ||||||| |   |||||||||    
T  4514 ttgaaaagtcggtgtctaaacgtttt-gcaaataagcgattatgtgaggttttggaaatcgatttttggg-tggttgaaacttgaatttttctgtagatt 4417  T
Q  131 atgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    |||||||||| |||||||||    || ||||| |||||||||| |||||||||||||| |||||  ||||| | |||||||||||||    
T  4416 atgatagagctaagtgtcagc---gtttaggcaaaaacggcattgaaaacgggttaacagtttgatttttatgtgcgaaaacgtgaa 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 72378 - 72283
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||| ||||||||| |||||||||||  | ||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  72378 ctgtagattgtgatagagctaagtgtcaggagcgcgtaggcgaaaatggcatcgaaaacgggttaacggtttgatttttaggcgcgaaaacgtgaa 72283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 17511 - 17672
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaa-tagctgtagattatgatagagccaagtgtcaggaa 153  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| ||||| || |||  |||||||  |   ||||||||||||||| || || ||| ||||     
T  17511 ttttggaaataagagattatgtgaggtttgggaaatcgattattggg-tggttgaaacttgaatctttttgtagattatgatagggctaa-tgttaggag 17608  T
Q  154 agtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
     ||||||||||||||||||||||||||||||||||||||||  ||||| |  ||||||||||||    
T  17609 cgtgtaggcgaaaacggcatcgaaaacgggttaacggtttgatttttatgttcgaaaacgtgaa 17672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 5603 - 5510
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||||||| | || ||||||   ||||| |||||||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  5603 gtagattatgatagagctatgtctcaggagcatgtagacgaaaacggcatcgaaaacgggttaacggtttggtttttatgctcgaaaacgtgaa 5510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 5671 - 5626
Alignment:
Q  55 ttttgcaaacaagagattatgtgaggtttggaaaatcgatttttgg 100  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  5671 ttttgcaaataagagatcatgtgagttttgggaaatcgatttttgg 5626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 6635 - 6730
Alignment:
Q  124 gtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    |||||||| | ||||| ||||||||||||| |||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  6635 gtagattaagttagagtcaagtgtcaggaacgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 6730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 21781 - 21606
Alignment:
Q  45 gtctaaacgtttttgcaaacaagagattatgtgaggtttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaag 144  Q
    ||||||||||| ||||||| ||| |||||||||||||||||  ||   ||| || || || |||  ||||||||| | ||||||||| ||||||||||||    
T  21781 gtctaaacgttcttgcaaataagggattatgtgaggtttggggaaattattcttcggatggttgatacttgaaattgttgtagattaagatagagccaag 21682  T
Q  145 tgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    ||||||||  ||| |||||||||||  | | ||| | | ||||||||||| |||||||||| ||||  ||||||||    
T  21681 tgtcaggagcgtggaggcgaaaacgagaccaaaatccgattaacggtttgaattttacgcgtgaaatggtgaaaat 21606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 29793 - 29605
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  |||||||| |||| ||||| |||||| ||||||||||||||  ||||| |||  |||||  | |||  |||||||||  ||||||||    
T  29793 ttgaaaagtcggtgtctaaacatttt-gcaaataagagactatgtgaggtttggggaaaat-gatccttgggacggttgagacttgaaatttctgtagat 29696  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || ||||||||| ||||||||||  ||||||||||||||| || | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  29695 taagatagagcctagtgtcaggagcgtgtaggcgaaaacgacaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 29605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 35258 - 35070
Alignment:
Q  32 ttgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggtttgg--aaaatcgatttttggggtgattgtcacttgaaatagctgtagat 129  Q
    |||||||||||  |||||||| |||| ||||| |||||| ||||||||||||||  ||||| |||  |||||  | |||  |||||||||  ||||||||    
T  35258 ttgaaaagtcggtgtctaaacatttt-gcaaataagagactatgtgaggtttggggaaaat-gatccttgggacggttgagacttgaaatttctgtagat 35161  T
Q  130 tatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaat 220  Q
    || ||||||||| ||||||||||  ||||||||||||||| || | ||| | | ||||||||| | |||||||||||||||  ||||||||    
T  35160 taagatagagcctagtgtcaggagcgtgtaggcgaaaacgacaccaaaatccgattaacggttggaattttacgcgcgaaatggtgaaaat 35070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 244
Target Start/End: Complemental strand, 76909 - 76788
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaatt 221  Q
    ||||| |||||||||| || |||||||| |||  |||||| |||||||||||||||||| | |||||||||||  ||||| |||||||||||||||  ||    
T  76909 ctgtacattatgatagggctaagtgtcaagaacatgtaggtgaaaacggcatcgaaaacagattaacggtttgatttttatgcgcgaaaacgtgaaggtt 76810  T
Q  222 ggaaaaactgttgttgtctgtca 244  Q
     ||||| ||| ||||||||||||    
T  76809 -gaaaatctgatgttgtctgtca 76788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 79498 - 79321
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| | ||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  79498 tgaaatgtcgatgtttaagcgttttcgccaataagtgtttatgtgaggttttggaaaat-gacttttgggttggttgaaacatgaaatttttgtagatta 79400  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    || ||||| ||||||| ||||  |||||||||||||||||||| ||| ||| ||||| ||||| |||||||||||||||    
T  79399 tgttagagtcaagtgttaggagcgtgtaggcgaaaacggcatcaaaatcggattaacagtttgaattttacgcgcgaaa 79321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 40230 - 40134
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | |||||| |||| |||||||||||||||  |||||||    
T  40230 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacgttttgaattttacgcgcgaaatggtgaaaa 40134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 45713 - 45617
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | |||||| |||| |||||||||||||||  |||||||    
T  45713 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacgatttgaattttacgcgcgaaatggtgaaaa 45617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 10219 - 10334
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   |||||| |||||||||||||||||||| |||||||||||  ||||| ||  ||||||||| |||||||||||    
T  10219 attatgatagtgctaagtgttaggagcatgtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcaggaaaacgtg-aaattggaaaa 10317  T
Q  228 actgttgttgtctgtca 244  Q
     ||| ||||||||||||    
T  10318 tctggtgttgtctgtca 10334  T

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Target: scaffold0269 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 16164 - 16068
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  16164 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacgacatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 14099 - 14214
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaattggaaaa 227  Q
    |||||||||| || |||||| ||||   ||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||| | || | |||||    
T  14099 attatgatagtgctaagtgttaggagcatgtaggcgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgt-agaagttgaaaa 14197  T
Q  228 actgttgttgtctgtca 244  Q
     ||| ||||||||||||    
T  14198 tctgatgttgtctgtca 14214  T

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Target: scaffold0039 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 19609 - 19705
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||||||| ||||||| |||||||  |||||||    
T  19609 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatccgattaacggtttgaattttacacgcgaaatggtgaaaa 19705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 166794 - 166890
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||| | | ||||||| ||| |||||||||||||||  |||||||    
T  166794 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaacggcatcaaaatctgattaacggcttgaattttacgcgcgaaatggtgaaaa 166890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 38897 - 38711
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   | |||||||    
T  38897 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttatagatta 38799  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||||||||||||   |||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  38798 tgttagagtcaagtgtcaggatcatgtaggtgaaaacggcatcaaaatccgattaacggtttgcattttacgcgcgaaatggtgaaaa 38711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 154468 - 154654
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| ||||||| || ||||||| || |||  || ||||||   |||||||||    
T  154468 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaat-gacttttgggatggttgaaacatgaaatttttgtagatta 154566  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    || ||||| ||| ||||| ||  ||||||| |||||||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  154567 tgttagagtcaaatgtcaagagcgtgtaggagaaaacggcatcaaaatccgattaacggtttgaattttacgcgcgaaattgtgaaaa 154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 117149 - 117054
Alignment:
Q  122 ctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||| ||||||||| | |||||||||  | |||||||||||| |||||| ||||||||||||||||||  ||||| |||| ||||||||||    
T  117149 ctgtagattgtgatagagctatgtgtcaggagcgcgtaggcgaaaacagcatcgtaaacgggttaacggtttgatttttaggcgcaaaaacgtgaa 117054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 3253 - 3401
Alignment:
Q  71 ttatgtgagg-tttggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacg 169  Q
    |||||||||| |||||||||| |||| ||||| || |||  |||||||||  ||| ||||||||||| | |||||||||||||   |||||||||||| |    
T  3253 ttatgtgaggttttggaaaat-gattattgggatggttgaaacttgaaatttctgaagattatgataaatccaagtgtcaggagcatgtaggcgaaaatg 3351  T
Q  170 gcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||| ||| | | ||||||||||  |||||||||||||||  |||||||    
T  3352 gcatcaaaatccgattaacggtttaaattttacgcgcgaaatggtgaaaa 3401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 31830 - 31926
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| |||||| |||||  ||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  31830 tgtagattatgttagagtcaagtgacaggagtgtgtaggcgaaaacgacatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaa 31926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 41014 - 40918
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||||||||||| ||||| |||||| |||||  ||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  41014 tgtagattatgttagagtcaagtgacaggagtgtgtaggcgaaaacgacatcaaaatctgattaacggtttgaattttacgcgcgaaatggtgaaaa 40918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 28339 - 28173
Alignment:
Q  53 gtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcagg 151  Q
    |||||||| || ||| || |||||||||||| || |||| |||| ||||| || |||  |||| ||||  ||||||||||||||||||  ||||||||||    
T  28339 gtttttgccaataagtgactatgtgaggttttgggaaat-gattcttgggatggttgagactttaaatctctgtagattatgatagagttaagtgtcagg 28241  T
Q  152 aaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    |   ||||||||||||||||||  ||| | | ||||||||||| |||||| ||||||||  |||||||    
T  28240 agcatgtaggcgaaaacggcattaaaatccgattaacggtttgaattttatgcgcgaaatggtgaaaa 28173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 1719 - 1780
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||| ||||||||||||||||    
T  1719 gtaggtgaaaacggcatcgaaaacggattaacggtttgatttttatgcgcgaaaacgtgaaa 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 55119 - 55034
Alignment:
Q  133 gatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaa 218  Q
    ||||| ||||||||||| ||||  ||||| ||||||||||||| |||| | |||||||||||  ||||| ||||||||||||||||    
T  55119 gatagggccaagtgtcatgaaaacgtaggtgaaaacggcatcggaaacagattaacggtttgatttttatgcgcgaaaacgtgaaa 55034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 1788 - 1954
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    ||||||||| || ||| ||| ||||||||||| ||||||| |||||||| | || |||  || ||||||  || ||||||||| | ||| | ||||||||    
T  1788 cgtttttgccaataagtgatgatgtgaggttttggaaaat-gatttttgagatggttgaaacatgaaatttctctagattatgttggagtctagtgtcag 1886  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  |||||||||||| ||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  1887 gagcgtgtaggcgaaa-cggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 1954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 10043 - 10209
Alignment:
Q  52 cgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagattatgatagagccaagtgtcag 150  Q
    ||||||||| || ||| ||| ||||||||||| ||||||| |||||||| | || |||  || ||||||  || ||||||||| | ||| | ||||||||    
T  10043 cgtttttgccaataagtgatgatgtgaggttttggaaaat-gatttttgagatggttgaaacatgaaatttctctagattatgttggagtctagtgtcag 10141  T
Q  151 gaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaaaa 219  Q
    ||  |||||||||||| ||||||| ||| | | ||||||||||| |||||||||||||||  |||||||    
T  10142 gagcgtgtaggcgaaa-cggcatcaaaatccgattaacggtttgaattttacgcgcgaaatggtgaaaa 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 1990 - 2125
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||||  ||||||| | || |||  || ||||||  ||||||||||    
T  1990 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatt-atttttgagatggttgaaacatgaaatttctgtagatta 2088  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaac 168  Q
    || ||||| ||||||||||||  ||||||||||||||    
T  2089 tgttagagtcaagtgtcaggagcgtgtaggcgaaaac 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 168
Target Start/End: Original strand, 9135 - 9270
Alignment:
Q  33 tgaaaagtcgaagtctaaacgtttttgcaaacaagagattatgtgaggttt-ggaaaatcgatttttggggtgattgtcacttgaaatagctgtagatta 131  Q
    ||||| ||||| || ||| |||||| || || ||| ||||||||||||||| |||||||  ||||||| | || |||  || ||||||  ||||||||||    
T  9135 tgaaatgtcgatgtttaagcgttttcgccaataagtgattatgtgaggttttggaaaatt-atttttgagatggttgaaacatgaaatttctgtagatta 9233  T
Q  132 tgatagagccaagtgtcaggaaagtgtaggcgaaaac 168  Q
    || ||||| ||||||||||||  ||||||||||||||    
T  9234 tgttagagtcaagtgtcaggagcgtgtaggcgaaaac 9270  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 33212 - 33125
Alignment:
Q  123 tgtagattatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaa 210  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||| | |||| ||| | | |||||||||   |||||||||||||||    
T  33212 tgtagattatgttagagtcaagtgtcaggagcgtgtaggcgaaaatgacatcaaaatccgattaacggttccaattttacgcgcgaaa 33125  T

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Target: scaffold0465 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 10676 - 10763
Alignment:
Q  128 attatgatagagccaagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtg 215  Q
    |||| ||||| || |||||||| |||   ||||| |||||||||||| ||||||| |||||||||||  ||||| |||| ||||||||    
T  10676 attaagatagggctaagtgtcatgaacaagtaggtgaaaacggcatcaaaaacggattaacggtttgatttttatgcgcaaaaacgtg 10763  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 6728 - 6803
Alignment:
Q  142 aagtgtcaggaaagtgtaggcgaaaacggcatcgaaaacgggttaacggtttggattttacgcgcgaaaacgtgaa 217  Q
    ||||||||||||  |||||  ||||||| |||||||||| | |||||||||||  ||||| |||||||||| ||||    
T  6728 aagtgtcaggaacatgtagttgaaaacgacatcgaaaacagattaacggtttgatttttatgcgcgaaaacatgaa 6803  T

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Target: scaffold0964 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 1776 - 1740
Alignment:
Q  157 gtaggcgaaaacggcatcgaaaacgggttaacggttt 193  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  1776 gtaggcgaaaacggaatcaaaaacgggttaacggttt 1740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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