View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6690_low_32 (Length: 283)

Name: NF6690_low_32
Description: NF6690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6690_low_32
NF6690_low_32
[»] chr3 (35 HSPs)
chr3 (1-263)||(41707060-41707325)
chr3 (1-261)||(8363968-8364231)
chr3 (1-261)||(29387759-29388022)
chr3 (1-261)||(46791702-46791965)
chr3 (1-258)||(28132740-28133000)
chr3 (1-261)||(23067730-23067993)
chr3 (1-260)||(51939561-51939822)
chr3 (1-260)||(52655128-52655390)
chr3 (1-254)||(18407995-18408250)
chr3 (1-258)||(21784789-21785048)
chr3 (1-260)||(24252416-24252679)
chr3 (1-263)||(27729774-27730037)
chr3 (1-261)||(23164577-23164838)
chr3 (70-261)||(27110882-27111074)
chr3 (50-261)||(6715247-6715458)
chr3 (5-199)||(54430412-54430607)
chr3 (132-259)||(51064299-51064426)
chr3 (1-199)||(25599091-25599291)
chr3 (1-208)||(13401311-13401518)
chr3 (17-197)||(40152152-40152332)
chr3 (1-260)||(48627034-48627279)
chr3 (1-138)||(7766983-7767122)
chr3 (1-112)||(21596282-21596394)
chr3 (1-110)||(42009267-42009377)
chr3 (1-57)||(27303189-27303246)
chr3 (1-57)||(36538191-36538248)
chr3 (17-73)||(1649853-1649909)
chr3 (1-107)||(19965885-19965992)
chr3 (3-103)||(1255057-1255158)
chr3 (1-57)||(46904744-46904801)
chr3 (1-57)||(50677319-50677376)
chr3 (17-110)||(43905865-43905958)
chr3 (1-130)||(51146867-51146996)
chr3 (17-57)||(4207376-4207416)
chr3 (155-199)||(43905976-43906020)
[»] chr8 (31 HSPs)
chr8 (1-261)||(7857883-7858144)
chr8 (1-261)||(18420614-18420879)
chr8 (1-258)||(43968075-43968334)
chr8 (1-260)||(13585098-13585358)
chr8 (1-261)||(43926328-43926591)
chr8 (1-261)||(42951774-42952042)
chr8 (1-260)||(44665051-44665308)
chr8 (1-261)||(3471390-3471659)
chr8 (79-259)||(3445481-3445661)
chr8 (1-199)||(32098183-32098383)
chr8 (1-261)||(34523956-34524202)
chr8 (1-158)||(18112011-18112175)
chr8 (1-261)||(27074382-27074633)
chr8 (1-258)||(5869327-5869579)
chr8 (116-188)||(1003958-1004032)
chr8 (116-199)||(41666058-41666141)
chr8 (1-138)||(3628752-3628889)
chr8 (157-261)||(18111611-18111717)
chr8 (1-73)||(23567279-23567352)
chr8 (17-144)||(35874840-35874968)
chr8 (1-57)||(12531561-12531618)
chr8 (1-73)||(39697943-39698016)
chr8 (1-61)||(1004056-1004118)
chr8 (17-110)||(30915310-30915403)
chr8 (3-57)||(42076110-42076165)
chr8 (150-200)||(12531432-12531482)
chr8 (5-57)||(29372359-29372412)
chr8 (150-200)||(39698079-39698130)
chr8 (153-199)||(23567418-23567464)
chr8 (31-112)||(2545957-2546037)
chr8 (17-57)||(5971778-5971818)
[»] chr7 (33 HSPs)
chr7 (1-260)||(46221708-46221969)
chr7 (1-252)||(18015587-18015839)
chr7 (1-258)||(8358299-8358558)
chr7 (1-261)||(33419122-33419384)
chr7 (1-260)||(42161125-42161389)
chr7 (1-261)||(33909863-33910123)
chr7 (1-260)||(36796377-36796636)
chr7 (5-231)||(4099794-4100023)
chr7 (1-212)||(11672429-11672645)
chr7 (1-260)||(44894034-44894299)
chr7 (1-258)||(6380089-6380349)
chr7 (73-261)||(12251466-12251655)
chr7 (90-258)||(38524984-38525154)
chr7 (4-199)||(7636334-7636536)
chr7 (1-261)||(40001701-40001946)
chr7 (1-261)||(26282547-26282793)
chr7 (1-164)||(32956670-32956834)
chr7 (1-197)||(26633227-26633422)
chr7 (6-260)||(25061702-25061957)
chr7 (174-260)||(27432390-27432476)
chr7 (1-85)||(773889-773974)
chr7 (1-173)||(41908064-41908237)
chr7 (1-72)||(12251293-12251365)
chr7 (1-144)||(30739038-30739182)
chr7 (1-112)||(36438356-36438468)
chr7 (1-112)||(40737996-40738108)
chr7 (1-261)||(1365822-1366068)
chr7 (1-112)||(9479074-9479186)
chr7 (206-261)||(44877006-44877061)
chr7 (1-58)||(18895402-18895460)
chr7 (1-56)||(42312012-42312068)
chr7 (39-239)||(40841289-40841491)
chr7 (150-199)||(25609964-25610014)
[»] chr2 (35 HSPs)
chr2 (1-263)||(18676316-18676581)
chr2 (1-258)||(19367424-19367683)
chr2 (1-261)||(26151752-26152014)
chr2 (1-261)||(13020218-13020482)
chr2 (1-261)||(25222119-25222382)
chr2 (1-258)||(42411563-42411822)
chr2 (1-260)||(45618774-45619035)
chr2 (1-261)||(6530456-6530718)
chr2 (1-258)||(7993433-7993691)
chr2 (1-260)||(41096543-41096806)
chr2 (44-261)||(42759797-42760015)
chr2 (38-259)||(36481204-36481425)
chr2 (1-261)||(4855786-4856052)
chr2 (27-258)||(45042187-45042421)
chr2 (1-250)||(2063616-2063864)
chr2 (17-205)||(12269279-12269466)
chr2 (1-155)||(34061861-34062015)
chr2 (5-144)||(39081314-39081453)
chr2 (1-261)||(15457314-15457559)
chr2 (1-73)||(18172945-18173018)
chr2 (1-112)||(21747235-21747347)
chr2 (1-138)||(1418832-1418968)
chr2 (3-187)||(31273173-31273357)
chr2 (1-199)||(18916059-18916245)
chr2 (1-112)||(27302533-27302645)
chr2 (1-178)||(36059910-36060087)
chr2 (1-73)||(38985714-38985787)
chr2 (3-57)||(38599404-38599459)
chr2 (1-57)||(13997316-13997373)
chr2 (17-197)||(1226289-1226465)
chr2 (150-199)||(17117778-17117828)
chr2 (150-199)||(18173080-18173130)
chr2 (150-199)||(38985849-38985899)
chr2 (1-41)||(17117650-17117691)
chr2 (1-57)||(29480642-29480699)
[»] chr6 (30 HSPs)
chr6 (1-258)||(2618155-2618414)
chr6 (1-261)||(6360558-6360818)
chr6 (1-261)||(3514855-3515119)
chr6 (1-261)||(6754003-6754265)
chr6 (1-259)||(29400939-29401199)
chr6 (1-260)||(7525171-7525434)
chr6 (1-247)||(57498-57747)
chr6 (1-166)||(12614721-12614885)
chr6 (58-261)||(24455016-24455220)
chr6 (80-261)||(31258543-31258726)
chr6 (1-143)||(29149316-29149462)
chr6 (1-153)||(628100-628254)
chr6 (177-263)||(12622144-12622230)
chr6 (1-110)||(3748573-3748683)
chr6 (1-166)||(30915371-30915539)
chr6 (1-72)||(31860989-31861060)
chr6 (6-57)||(21946109-21946161)
chr6 (1-103)||(1690638-1690741)
chr6 (150-260)||(1093181-1093290)
chr6 (17-57)||(31234913-31234953)
chr6 (1-87)||(14893422-14893509)
chr6 (5-80)||(22503725-22503798)
chr6 (1-144)||(19231529-19231671)
chr6 (153-199)||(29308611-29308658)
chr6 (150-260)||(31860815-31860926)
chr6 (150-199)||(1690774-1690824)
chr6 (1-57)||(29308472-29308529)
chr6 (17-54)||(32056065-32056102)
chr6 (1-57)||(1093046-1093102)
chr6 (17-57)||(31244050-31244089)
[»] chr4 (30 HSPs)
chr4 (1-261)||(32130795-32131057)
chr4 (1-258)||(28463593-28463853)
chr4 (1-263)||(53011510-53011771)
chr4 (1-261)||(19661177-19661438)
chr4 (1-258)||(11681747-11682008)
chr4 (1-258)||(11690026-11690287)
chr4 (28-261)||(21168853-21169088)
chr4 (1-261)||(41038045-41038309)
chr4 (1-261)||(44477835-44478098)
chr4 (1-249)||(23426171-23426417)
chr4 (1-260)||(27632199-27632457)
chr4 (1-258)||(23256394-23256653)
chr4 (1-261)||(29221626-29221891)
chr4 (17-155)||(16072498-16072636)
chr4 (149-259)||(39372815-39372927)
chr4 (1-112)||(29579827-29579939)
chr4 (1-261)||(45172650-45172895)
chr4 (1-161)||(21791552-21791712)
chr4 (1-112)||(35653985-35654097)
chr4 (1-144)||(43154793-43154936)
chr4 (1-260)||(34982038-34982283)
chr4 (116-258)||(51066707-51066851)
chr4 (3-144)||(22423600-22423741)
chr4 (1-112)||(5545276-5545388)
chr4 (17-144)||(24449040-24449168)
chr4 (141-250)||(29579655-29579766)
chr4 (116-167)||(48512342-48512393)
chr4 (1-57)||(55134210-55134267)
chr4 (28-197)||(26329065-26329233)
chr4 (1-73)||(10575528-10575601)
[»] chr1 (40 HSPs)
chr1 (1-260)||(12884142-12884404)
chr1 (1-260)||(51110106-51110369)
chr1 (1-261)||(14084706-14084968)
chr1 (1-258)||(48722375-48722637)
chr1 (1-252)||(50552299-50552554)
chr1 (1-261)||(33124635-33124900)
chr1 (1-259)||(17487288-17487551)
chr1 (1-261)||(18127942-18128207)
chr1 (1-261)||(10109514-10109779)
chr1 (1-187)||(30899526-30899715)
chr1 (1-249)||(20905292-20905545)
chr1 (1-260)||(6150503-6150780)
chr1 (80-261)||(20470524-20470706)
chr1 (1-260)||(52055347-52055611)
chr1 (1-238)||(29208103-29208341)
chr1 (1-199)||(27703534-27703737)
chr1 (1-212)||(25930448-25930663)
chr1 (4-199)||(30004915-30005108)
chr1 (1-260)||(6333521-6333782)
chr1 (53-239)||(28189211-28189403)
chr1 (1-112)||(50371081-50371193)
chr1 (1-260)||(12971219-12971465)
chr1 (1-99)||(28885676-28885775)
chr1 (1-144)||(5560399-5560542)
chr1 (1-112)||(44836726-44836838)
chr1 (137-259)||(2021942-2022064)
chr1 (1-131)||(37873767-37873898)
chr1 (2-58)||(13120872-13120929)
chr1 (1-57)||(17674359-17674416)
chr1 (1-64)||(2-66)
chr1 (1-57)||(22386842-22386899)
chr1 (4-112)||(42740057-42740166)
chr1 (3-166)||(3907366-3907528)
chr1 (17-157)||(15441193-15441332)
chr1 (25-92)||(9777380-9777447)
chr1 (1-231)||(1269385-1269610)
chr1 (17-59)||(32810373-32810415)
chr1 (1-57)||(24556808-24556865)
chr1 (37-144)||(26486407-26486513)
chr1 (157-221)||(28886140-28886205)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-261)||(16501-16769)
[»] chr5 (37 HSPs)
chr5 (1-258)||(13474427-13474689)
chr5 (1-261)||(13423657-13423923)
chr5 (1-259)||(26377779-26378042)
chr5 (1-233)||(13656033-13656269)
chr5 (1-258)||(36718572-36718832)
chr5 (1-259)||(12661102-12661368)
chr5 (51-258)||(8398778-8398989)
chr5 (1-260)||(19099319-19099582)
chr5 (36-212)||(26311851-26312029)
chr5 (1-261)||(43511431-43511677)
chr5 (1-112)||(138091-138203)
chr5 (5-226)||(27351179-27351404)
chr5 (1-130)||(29156120-29156249)
chr5 (1-264)||(42291886-42292134)
chr5 (1-112)||(17513941-17514053)
chr5 (1-130)||(10591278-10591407)
chr5 (1-261)||(4734587-4734832)
chr5 (1-73)||(20975971-20976044)
chr5 (17-112)||(931327-931422)
chr5 (150-258)||(20975800-20975906)
chr5 (1-58)||(18873458-18873516)
chr5 (36-166)||(8379562-8379691)
chr5 (1-112)||(10033493-10033606)
chr5 (1-161)||(40956217-40956372)
chr5 (156-261)||(10591418-10591521)
chr5 (1-50)||(3349734-3349784)
chr5 (1-57)||(5829387-5829442)
chr5 (2-55)||(7390406-7390460)
chr5 (154-199)||(17514092-17514138)
chr5 (1-56)||(17325847-17325904)
chr5 (17-179)||(23069099-23069262)
chr5 (4-56)||(33281677-33281730)
chr5 (17-73)||(37029054-37029108)
chr5 (150-199)||(29156062-29156113)
chr5 (122-229)||(40778675-40778785)
chr5 (150-198)||(3349869-3349917)
chr5 (16-112)||(40779139-40779235)
[»] scaffold0181 (2 HSPs)
scaffold0181 (1-170)||(17137-17307)
scaffold0181 (162-263)||(18128-18231)
[»] scaffold0035 (1 HSPs)
scaffold0035 (78-261)||(22846-23032)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-250)||(46178-46429)
[»] scaffold0564 (1 HSPs)
scaffold0564 (44-153)||(979-1088)
[»] scaffold0606 (1 HSPs)
scaffold0606 (1-73)||(8400-8473)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 41707060 - 41707325
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  41707060 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatgcaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 41707159  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||| |||||||||    
T  41707160 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaaagatataacatatatattttttatttaagtggggggtgggtattaaatttaattt 41707259  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggctg 263  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  41707260 ttcgttagaggcccgtagcatttggaggcccggcctggttgaacaccttgcacaccctcaaggctg 41707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 8364231 - 8363968
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  8364231 tgtgattctttcaatgaaataactttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 8364132  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    || ||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||| |||||||||||||||    
T  8364131 acaagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaagtggggggtggatattagatttaattt 8364032  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  8364031 ttcgttagaggcccgtagcaattggaggcccggcctggttgagcaccttgcacaccctcaaggc 8363968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 29387759 - 29388022
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  29387759 tgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 29387858  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    ||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  29387859 actagagtctaaaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggtgggtattagatttaattt 29387958  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||| || |||| |||||| ||| ||||||| ||||| |||||||||||| ||||||||    
T  29387959 ttcgttagaagctcgtagcatttgaaggtccggcctggttgagcaccttgcacacactcaaggc 29388022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 46791702 - 46791965
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| |||    
T  46791702 tgtgattcttgcaatgaaatagttttccaaattgactgattaagtgattatacaaattagaggtggtttgataggatccgatttatgtacaaaaaggaga 46791801  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  46791802 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgttataacatatatattttttatttaagtggggggtgggtattagatttaattt 46791901  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||| ||||| |||||||||||||| | ||||| | |||||||||||||||||||||    
T  46791902 ttcgttagaggtccgtagcatttggaggcccgacttagttaagcaccttgcacaccctcaaggc 46791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 28132740 - 28133000
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||    
T  28132740 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaagggtgatttgataggatctgatttatgtacaaaaaggaga 28132839  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   || |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  28132840 actagagtctagaaaaaatctcaaatgtgtactaaagaaagaaaatgatataacatatatattttttagttaaatggggggtgggtattatatttaattt 28132939  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||| |||||||||||||||| |||||||  || ||||| ||||||||||||||||||    
T  28132940 ttcgttaaaggcccgtaacatttgaaggcccgatctggttgagcaccttgcacaccctcaa 28133000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 23067730 - 23067993
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| || |||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  23067730 tgtgattctttaaatgaaataacttttcaaattgactggtgaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 23067829  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaattt 197  Q
    |||| ||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  23067830 actaaagtctagaaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatattttatttaaatgggggtgggtattaaatttaattt 23067929  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||| ||||| || ||||||||||||||| ||||| |||||||||||||||||||||    
T  23067930 ttcgttagaggtccgtagcaattggaggcccggcctggttgagcaccttgcacaccctcaaggc 23067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 51939561 - 51939822
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||  |||    
T  51939561 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaagaga 51939660  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  51939661 actagagtctaga-aaaaactcaaacgtggactaaagaaagaaaaggatataacatatatattttttatttaagtggggggtgggtattagatttaattt 51939759  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    || ||||||||||| ||  |||||||||||| |||| ||||| ||||||||||||||||||||    
T  51939760 tttgttagaggcccatagaatttggaggccccgcctggttgagcaccttgcacaccctcaagg 51939822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 52655128 - 52655390
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||    
T  52655128 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattagtggtggtttgataggatccgatttatatacaaaaaggaga 52655227  T
Q  100 actagagtctagatttaaactcaaac--gtgtactaaagaaagaaaatgatataacatatatattttttattta--aatggggtgggtattagatttaat 195  Q
    |||||||||||||   ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   | |||||||| ||||||||||||    
T  52655228 actagagtctagagaaaaactcaaacgtgtgtactaaagaaagaaaatgatataacatatatattttttatttatgtagggggtggggattagatttaat 52655327  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||| ||||||||||| |||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  52655328 tttt-gttagaggcccataacattt-gaggcccggcctggttaagcaccttgcacaccctcaagg 52655390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 18408250 - 18407995
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||    
T  18408250 tgtgattctttcaatggattagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaatgaga 18408151  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaattt 197  Q
    |||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  18408150 actaaagtctaga-aaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggaaggtgggtattatatttaattt 18408052  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccc 254  Q
    ||||||| ||  ||||| || ||| |||||||||||| |||| |||||| |||||||    
T  18408051 ttcgttaaagatccgtagcaattgaaggcccggcctaattgaacaccttacacaccc 18407995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 21784789 - 21785048
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  21784789 tgtgattctttcaatgaaatagctttccaaattaactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 21784888  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata-ttttttatttaaat-ggggtgggtattagatttaattt 197  Q
    |||||||||||||   |||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||| | ||||||  |||||||||||||||    
T  21784889 actagagtctaga-aaaaactcaaacgtgtactaaagaaataaagttatataacatatatatttttttatttaagtgggggtgaatattagatttaattt 21784987  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||||||||| |||||| |||| ||||||||||||| ||| | ||||||||||||||||||    
T  21784988 ttcgttagagacccgtagcattgggaggcccggcctggttaagcaccttgcacaccctcaa 21785048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 24252679 - 24252416
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||| || |||| || |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| || |||| |||||||||||||    
T  24252679 tgtgattcttgcactgaaataactttccaaattgactgattaagtgattatacaaattaagggtggtttgataggatctga-ttatgtacaaaaagaaga 24252581  T
Q  100 actagagtctag--atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    ||||||||||||  |   ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |  |||||||||||||||| ||||    
T  24252580 actagagtctagaaaaaaaaactcaaacgtgtactaaagaaagaaaaagatataacatatatattttttacttaagtcgggggtgggtattagatctaat 24252481  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||| |||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||    
T  24252480 ttttagttagaggcccgtaacatttggaggcccggtctggttgagcaccttacacaccctcaagg 24252416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 27729774 - 27730037
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||| || || | ||||| |||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||||||| |||    
T  27729774 tgtgattctttcgatcaaattgctttccaaattgattgattatgtgattatacaaattaggggtggtttgataagatccgatttatgtacaaaaaggaga 27729873  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    ||||||||||| |   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||    
T  27729874 actagagtctacaaaaaaactcaaacgtgtactaatgaaagaaaatgatataacatatatattttttatttaagtggggtacgtattatatttaattttt 27729973  T
Q  200 cgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggctg 263  Q
    ||||||||||||||| |||||||||| ||| |||  |||| || ||||||||| ||||| ||||    
T  27729974 cgttagaggcccgtaccatttggaggtccgacctgattgagcatcttgcacactctcaaagctg 27730037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 23164577 - 23164838
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||  || |||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||    
T  23164577 tgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaattaggggtggtttgataggatcagatttatgtacaaaaaggaga 23164676  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||| || |||||||| |||||||||||||| |||||||||||| |  |||||||||||||||  ||||||    
T  23164677 actagagtctaga-aaaaactcaaacgtgtactgaaaaaagaaaaggatataacatatat-ttttttatttaagtgaggggtgggtattagacataattt 23164774  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    || ||| ||||||| |  |||||||||||||| ||| ||||| |||||||||| ||| ||||||    
T  23164775 tttgtttgaggcccatggcatttggaggcccgacctggttgaacaccttgcactcccccaaggc 23164838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 27110882 - 27111074
Alignment:
Q  70 ataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatt 169  Q
    ||||||| |||||||| ||||||||  ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27110882 ataggatacgatttatgtacaaaaatgagaactagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaaagatataacatatatattttttatt 27110981  T
Q  170 taa--atggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||  | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||||    
T  27110982 taagtagggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaggccccgcctggttgagcacctt-cacaccctcaaggc 27111074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 50 - 261
Target Start/End: Complemental strand, 6715458 - 6715247
Alignment:
Q  50 tacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgata 149  Q
    |||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||||   ||| ||||||||||| |||| | | | || ||||    
T  6715458 tacaaattataggtggtttgataggatccgatttatatacaaaaaggagaactagagtctagaaaaaaa-tcaaacgtgtattaaa-agatataaagata 6715361  T
Q  150 taacatatatattttttatttaaatgg--ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttg 247  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||    
T  6715360 taacatatatattttttatttaaatggagggtgggtattaaatttaatttttcgttagaggcccgtaacatttagaggctcggcctggttgagcaccttg 6715261  T
Q  248 cacaccctcaaggc 261  Q
    ||||||||||||||    
T  6715260 cacaccctcaaggc 6715247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 54430607 - 54430412
Alignment:
Q  5 attctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaacta 103  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||| ||||||||| |||||||    
T  54430607 attcttttaatgaaataacttttcaaattgactgattaagtgattatacaaattaggggtggtttgataacatcagatttatgtacaaaaaggagaacta 54430508  T
Q  104 gagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaattttt 199  Q
    ||| |||||   ||||||||||||||||  || |||||||| ||||||||| |||| |||||||||||| |||  ||||||||||||| |||||||||    
T  54430507 gagcctaga-aaaaactcaaacgtgtaccgaaaaaagaaaaggatataacacatat-ttttttatttaagtgggaggtgggtattagacttaattttt 54430412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 51064426 - 51064299
Alignment:
Q  132 taaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggc 231  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||  ||||||| |||||||    
T  51064426 taaagaaagaaaaagatataacatatatattttttatttaagtggaatgggtattagatttaatttttcgttagaggtccgtagtatttggaagcccggc 51064327  T
Q  232 ctagttgatcaccttgcacaccctcaag 259  Q
    ||  |||| |||||||||||||||||||    
T  51064326 ctgattgaacaccttgcacaccctcaag 51064299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25599091 - 25599291
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||| ||| ||||||| ||||||||| |||    
T  25599091 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatataaattagaggtggtttgatagaatcagatttatgtacaaaaaggaga 25599190  T
Q  100 actagagtct-agatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg--gggtgggtattagatttaatt 196  Q
    |||||||||| | |   |||||||||| |||||| |||||||||||  |||||||  |||| |||||||||||| ||  |||| | ||||||| ||||||    
T  25599191 actagagtctaaaaaaaaaactcaaacctgtactgaagaaagaaaagaatataac--atattttttttatttaagtggagggtagatattagacttaatt 25599288  T
Q  197 ttt 199  Q
    |||    
T  25599289 ttt 25599291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 13401518 - 13401311
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||  || ||| ||||||||| |||    
T  13401518 tgtgattcttccaatgaaatagcttttcaaattgactgattaagtgattatacaaattaagagtggtttgataggatcgaatgtatgtacaaaaaggaga 13401419  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg--gggtgggtattagatttaattt 197  Q
    |||||||| ||||   |||||| |||||| ||  || |||||||| |||||  |||| || |||||||||||| ||  |||||||||||| | |||| ||    
T  13401418 actagagtttagaaaaaaactc-aacgtggaccgaaaaaagaaaaggatat--catacattttttttatttaagtgtagggtgggtattaaacttaaatt 13401322  T
Q  198 ttcgttagagg 208  Q
    || ||| ||||    
T  13401321 tttgttcgagg 13401311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 40152152 - 40152332
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagattta 116  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||| ||| ||| ||| ||| |  ||||||||||| ||||||||| |   |    
T  40152152 aatagtttttcaaattgaccgattaagtgattatacaaattggggatgatttggtagcatcagatctatgtctaaaaagaagaattagagtcta-aaaaa 40152250  T
Q  117 aactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtg-ggtattagatttaattt 197  Q
    |||||||||||||||  |||||| |||| ||  |||||||||| |||||| ||||||||| |||  |||||||| |||||||    
T  40152251 aactcaaacgtgtaccgaagaaaaaaaaagaagtaacatatattttttttgtttaaatggagtgttgtattagacttaattt 40152332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 48627034 - 48627279
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| | |||| | |||||| ||| ||||||| | || | |  |||    
T  48627034 tgtgattctttcaatgaaatagattttcaaattgactgatcaagtgattatacaaattggcggtggtctgatagtatcagatttatgtccagatatgaga 48627133  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  48627134 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtgggggtgggtattagagttaatttt 48627219  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |  |  ||||||| || | |||||||||||||| |  |||| |||||||||| |||||||||    
T  48627220 t--tatgaggcccatagcttttggaggcccggcttgattgagcaccttgcaccccctcaagg 48627279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7767122 - 7766983
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||  |||||||| |||  |||||| | || |||| |||    
T  7767122 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggttgtttgatagcatcaaatttatgtccagaaagtaga 7767023  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaa 138  Q
    ||| |||||||| |   ||||||| |||||||||||||||    
T  7767022 actggagtctagaaaaaaaactcatacgtgtactaaagaa 7766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21596394 - 21596282
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||  |||||| ||||||| ||||| ||||||||||||||||||||||||| || ||| |||||||| ||| ||||||| | || |||| |||    
T  21596394 tgtgattcttgtaatgaaatagctttccaaatcgactgattaagtgattatacaaattgggagtggtttgatagcatctgatttatgtccagaaaggaga 21596295  T
Q  100 actagagtctaga 112  Q
    | |||||||||||    
T  21596294 attagagtctaga 21596282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42009267 - 42009377
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||   |||| |||||||| |||  |||||| | || |||| |||    
T  42009267 tgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccagaaagtaga 42009366  T
Q  100 actagagtcta 110  Q
    |||| ||||||    
T  42009367 actaaagtcta 42009377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27303246 - 27303189
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  27303246 tgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaatt 27303189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36538191 - 36538248
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  36538191 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaatt 36538248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 1649853 - 1649909
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  1649853 aatagattttcaaattgaatgattaagtgattatacaaattgggggtgatttgatag 1649909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19965885 - 19965992
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| ||||||||||| || ||| |||||||||||||||||||| |  ||| |||||||| ||| ||||||| | ||||||| |||    
T  19965885 tgtgattcttttaatgaaatagcttttcaatttaactaattaagtgattatacaaattggcagtggtttgatagcatcagatttatgtccaaaaaggaga 19965984  T
Q  100 actagagt 107  Q
    | ||||||    
T  19965985 attagagt 19965992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 1255057 - 1255158
Alignment:
Q  3 tgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaac 101  Q
    |||||||||||||||| || ||||  |||||||| |||||||| |||||||||||||  |||  |||||||| ||| ||||||| | |||||||||||||    
T  1255057 tgattctttcaatgaaataactttctaaattgaccgattaagtcattatacaaattaaaggtcgtttgatagcatcagatttatgtccaaaaagaagaac 1255156  T
Q  102 ta 103  Q
    ||    
T  1255157 ta 1255158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 46904801 - 46904744
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  46904801 tgtgattctttcaatgaaatagttttttaaattgactgattaagtgattatacaaatt 46904744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 50677319 - 50677376
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50677319 tgtgattgtttcaatgaaatagtttttcaaattgactgattaagtgattatacaaatt 50677376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 43905865 - 43905958
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtcta 110  Q
    |||| ||||||||||||||||||| ||||||||||||||||  ||||  |||||||| | | ||||||| | || | || ||||||| ||||||    
T  43905865 aataacttttcaaattgactgattgagtgattatacaaattgagggtagtttgatagtaccagatttatgtccagataggagaactaaagtcta 43905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 51146996 - 51146867
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || ||| |||| ||||||||||||||||||| ||| ||||||   |||| ||| |||| |||  |||||| | |||||||  ||    
T  51146996 tgtgattctttcaataaaatagttttttaaattgactgattaagtga-tattcaaattgatggtggtttaatagcatcaaatttatgtccaaaaagtgga 51146898  T
Q  100 actagagtctagatttaaactcaaacgtgta 130  Q
    |||||| ||||||   ||||||| |||||||    
T  51146897 actagaatctagaaaaaaactcatacgtgta 51146867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 4207376 - 4207416
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||| |||| |||||||| ||||||||||||||||||||||    
T  4207376 aatatctttccaaattgaatgattaagtgattatacaaatt 4207416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 43905976 - 43906020
Alignment:
Q  155 tatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    |||||||||||||||||| |||||||| || |||| |||||||||    
T  43905976 tatatattttttatttaagtggggtggataatagagttaattttt 43906020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 7858144 - 7857883
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  7858144 tgtgattctttaaatgaattaactttccaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatgttcaaaaaggaga 7858045  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  7858044 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggtgggtattaaatttaattttt 7857945  T
Q  200 cgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||| ||||||| || ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7857944 cgttagaagcccgtagcaattggaggcccgacctggttgagcaccttgcacaccctcaaggc 7857883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 18420614 - 18420879
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||| ||||||||| |||    
T  18420614 tgtgattctttcaatgaaacagcttttcaaattgactgattaagtgattatacaaattaagtgtggtttgataggatctgatttatgtacaaaaaggaga 18420713  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataac--atatatattttttatttaaatg--gggtgggtattagatttaat 195  Q
    |||||||||| ||   ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||  ||||||||||||||||||||    
T  18420714 actagagtctggaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatattttttatttaagtggagggtgggtattagatttaat 18420813  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||| |||||||    
T  18420814 ttttcgttagaagcccgtaacatttggaggcccgacctagttgaaaaccttgcacaccatcaaggc 18420879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 43968075 - 43968334
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||    
T  43968075 tgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaattaggagtggtttgataggatccgatttatgtacaaaaaggaga 43968174  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttattta-aatggggtgggtattagatttaatttt 198  Q
    |||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |   |||||||||||||||||||||||||    
T  43968175 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatattttttttattaagtgtggggtgggtattagatttaatttt 43968274  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||||||||||| |||| ||||||||||||  |||  |||| |||||||||||| |||||    
T  43968275 tcgttagaggcctgtaatatttggaggcccaacctgattgagcaccttgcacactctcaa 43968334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 13585358 - 13585098
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||  | |    
T  13585358 tgtgattctttcaatgaaatagctttccaaattgactgattaattgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaagaaa 13585259  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||  |||||||||||||||||||||||    
T  13585258 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacat--atattttttagttaaatggggggtgggtattagatttaattt 13585161  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||||||||||||  |||||| |||||||| ||  |||| ||||||||||||||| ||||    
T  13585160 ttcgttagaggcccgttgcatttgaaggcccggtctgattgagcaccttgcacacccttaagg 13585098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 43926328 - 43926591
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||    
T  43926328 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaattatgggtggtttgataggatccgatttatatacaaaaagtaga 43926427  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaa-gaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaat 195  Q
    |||||||||||| |   |||||||||||||||||||| || | |||  ||||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  43926428 actagagtctagaaaaaaaactcaaacgtgtactaaatgatataaa--gatataacatatatattttttatttaagtgggaggtgggtattaaatttaat 43926525  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||| ||||||||||||  ||||||||| |||| |||  |||| |||||||||||||||||||||    
T  43926526 ttttccttagaggcccgtggcatttggagacccgacctgattgagcaccttgcacaccctcaaggc 43926591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 42951774 - 42952042
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||  |||    
T  42951774 tgtgattctttcaataaaataacttttcaaattgactgattaagtgattatacaaattaggagtggtttgataggattcgatttatgtacaaaaatgaga 42951873  T
Q  100 actagagtctag----atttaaactcaaacgtgtactaaagaaagaaaatgatataacatata-tattttttatttaaat--ggggtgggtattagattt 192  Q
    ||||||||||||    |   ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |  ||||||||||||||||||    
T  42951874 actagagtctagaagaaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatttttttttatttaagtggggggtgggtattagattt 42951973  T
Q  193 aatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||| |||| |||| || ||||| || | |||  ||  | || |||||||||||||||||||||    
T  42951974 aatttttcgctagaagcccatagcatttagaagtccgaactgatcgagcaccttgcacaccctcaaggc 42952042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 44665051 - 44665308
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||| ||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||||| |||    
T  44665051 tgtgattctttcaatgaaataactttccaaatagactgattaagtgatgatacaaattagaggtggtttgataggatccgatttatgtacaaaaaggaga 44665150  T
Q  100 actagagtcta-gatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatt 196  Q
    |||||||||||  |   ||||||||||||||    ||||||||||| ||||||||  ||||||||||||||||| |  ||||||||||||||||||||||    
T  44665151 actagagtctataaaaaaaactcaaacgtgt----aagaaagaaaaagatataac--atatattttttatttaagtgaggggtgggtattagatttaatt 44665244  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
     | ||||||||||||||| |||||||||||||||| |  |||| |||||| |||||||||||||    
T  44665245 atgcgttagaggcccgtagcatttggaggcccggcttgattgagcaccttacacaccctcaagg 44665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 3471659 - 3471390
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||  |||||| ||||||||  |||    
T  3471659 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgatagaatcacatttatgtacaaaaatgaga 3471560  T
Q  100 actagagtctag-----atttaaactcaaacgtgtactaaagaaagaaaatgatataacata-tatattttttatttaaat--ggggtgggtattagatt 191  Q
    |||||| |||||     |   ||||||||| ||||||| ||||||||||||||||||||||| | | |||||||||||| |  ||||||||||||| | |    
T  3471559 actagattctagaaagaaaaaaaactcaaatgtgtactgaagaaagaaaatgatataacatatttttttttttatttaagtggggggtgggtattacact 3471460  T
Q  192 taatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||| ||| |||||||||| |||||||||| ||| ||| ||||| || ||||||| ||| ||||||    
T  3471459 taattttttgtttgaggcccgtagcatttggaggtccgacctggttgagcatcttgcactcccccaaggc 3471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 79 - 259
Target Start/End: Complemental strand, 3445661 - 3445481
Alignment:
Q  79 gatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggg 177  Q
    ||||||| ||||||||| |||||||||||||| |   ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||    
T  3445661 gatttatgtacaaaaaggagaactagagtctaaaaa-aaattcaaacgtgtactaaagaaagaaaaagatataacatatatattttttatttaagtgggg 3445563  T
Q  178 gtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaag 259  Q
    ||||||||||||||||||| |||||||||  |||||| |||||| || ||||| ||  |||| |||||||||||||||||||    
T  3445562 gtgggtattagatttaattcttcgttagaaacccgtagcatttgaagacccggtctcattgagcaccttgcacaccctcaag 3445481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32098183 - 32098383
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||| | ||| |||||||| |||  |||||| | ||||||| | |    
T  32098183 tgtgattctttcaatgaaatagttttccaaattgactgattaagtgatcatacaaattaagagtggtttgatagcatcaaatttatgtccaaaaaggata 32098282  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||| ||||||||||| ||  |||||||||||||||||| |||| |  ||||||||||||||| |||||||    
T  32098283 actagagtctaga-aaaaactcaaacgtgtactgaagaaagaaaaagaagtaacatatatattttttaattaagtggggggtgggtattagacttaattt 32098381  T
Q  198 tt 199  Q
    ||    
T  32098382 tt 32098383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 34523956 - 34524202
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | | ||||||| | || | || |||    
T  34523956 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgtccagataggaga 34524055  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34524056 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtgggggtgggtattagatttaatttt 34524141  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |  |  |||||||||| | |||||||| ||||| |  |||| |||||||||| ||||||||||    
T  34524142 t--tctgaggcccgtagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 34524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 18112175 - 18112011
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||| |||  |||    
T  18112175 tgtgattctttcaataaaatagttttccaaattgactgattaagtgattatacaaattaggagtggtttgatatgatccgatttatgtacataaaagaga 18112076  T
Q  100 actagagtctag------atttaaactcaaacgtgtactaaagaaagaaaatgatataacatata 158  Q
    |||||| |||||      |   |||||||||||| ||||||||||||||||||||||||||||||    
T  18112075 actagattctagaaagaaaaaaaaactcaaacgtatactaaagaaagaaaatgatataacatata 18112011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 27074633 - 27074382
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||| |||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||     
T  27074633 tgtgattttttcaatgaaatagacttttaaattgactgattaagtgattatacaaattaggggtggtttgataggatcagatttatgtacaaaaaggagt 27074534  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaa--atggggtgggtattagatttaattt 197  Q
    ||||||||   || |           | ||| | |||||||||||||||||||||||||| ||||||||||||  | || ||| |||||||| |||||||    
T  27074533 actagagtagggagt-----------gagtattgaagaaagaaaatgatataacatatat-ttttttatttaagtagggagtgagtattagacttaattt 27074446  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    || ||| |||| || |  |||||| |||||||  ||| |||| || ||||||| ||||||||||    
T  27074445 tttgtttgaggtccattgcatttgaaggcccgatctaattgagcatcttgcactccctcaaggc 27074382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 5869327 - 5869579
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| | |||| |||||||| || | |||||| |||| |||| |||    
T  5869327 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattttaaaaatt-gtggtggtttgatagtat-caatttatgtacagaaaggaga 5869424  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg-gggtgggtattagatttaatttt 198  Q
    |||| |||||| |   |||||||| |||||||| || ||||||||  |  |||||||| | ||||||||||| | | ||||||||||||||  |||||||    
T  5869425 actaaagtcta-aaaaaaactcaatcgtgtactgaataaagaaaaataagtaacatat-ttttttttatttagacgagggtgggtattagacataatttt 5869522  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
       ||  ||||| ||| |||||||||||||||||| || || |||||||||| |||||||    
T  5869523 ---ttttaggccagtaccatttggaggcccggcctggtagagcaccttgcactccctcaa 5869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 1004032 - 1003958
Alignment:
Q  116 aaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattag 188  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  1004032 aaactcaaacatgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggtgggtattag 1003958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 41666058 - 41666141
Alignment:
Q  116 aaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    ||||||||||||||||  ||||||||| ||||  ||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  41666058 aaactcaaacgtgtaccgaagaaagaagatgaagtaacatatatattttttatttaagtggggttggtattagacttaattttt 41666141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3628752 - 3628889
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||  |||| |||||||| |||  ||||||   || || | |||    
T  3628752 tgtgattctttcaatgaaataacttttcaaattgactgattatgtgattatacaaattaatggtggtttgatagcatcaaatttatgaccagaatgtaga 3628851  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaa 138  Q
    |||||||||||||   ||||||| ||||||||| |||||    
T  3628852 actagagtctaga-aaaaactcatacgtgtactgaagaa 3628889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 18111717 - 18111611
Alignment:
Q  157 tatattttttatttaaatgg--ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccc 254  Q
    |||||||||||||||| | |  ||||||| ||||||||||||||||| ||||| ||| || |||||||||| ||| |||  |||| ||||||||||||||    
T  18111717 tatattttttatttaagttgagggtgggtgttagatttaatttttcgatagagacccatagcatttggaggtccgacctgattgagcaccttgcacaccc 18111618  T
Q  255 tcaaggc 261  Q
    |||||||    
T  18111617 tcaaggc 18111611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23567279 - 23567352
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||| ||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  23567279 tgtgatactttcaatgaaatagtatttcaaattgactgattaagtgattatacaaattgggggtggtttgatag 23567352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 35874968 - 35874840
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaatt--aggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatt 114  Q
    ||||| ||||||||||||| |||||||||||||||||||||      ||| |||||||| |||  |||||||| || |||| ||||||||||||||||      
T  35874968 aatagtttttcaaattgaccgattaagtgattatacaaattgatatagtggtttgatagcatcaaatttatatccagaaagtagaactagagtctaga-a 35874870  T
Q  115 taaactcaaacgtgtactaaagaaagaaaa 144  Q
     ||||||| ||||||||| |||||||||||    
T  35874869 aaaactcatacgtgtactgaagaaagaaaa 35874840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12531618 - 12531561
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  12531618 tgtgattctttcaatgaaatagatttttaaattgactgattaagtgattatacaaatt 12531561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39697943 - 39698016
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||| | |||| ||||||||    
T  39697943 tgtgattctttcaatgaaatagcttttcaaattgactaattaaatgatcatacaaattggtggtggtttgatag 39698016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1004118 - 1004056
Alignment:
Q  1 tgtgattctttcaatgaa--tagcttttcaaattgactgattaagtgattatacaaattaggg 61  Q
    ||||||||||||||||||   |  |||||||||||||||||||||||||||||||||||||||    
T  1004118 tgtgattctttcaatgaaataattttttcaaattgactgattaagtgattatacaaattaggg 1004056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 30915310 - 30915403
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtcta 110  Q
    ||||||||||||||||||||||||||||||||||||| ||| | || | |||| ||| ||| ||| ||| | || |||| |||| |||||||||    
T  30915310 aatagcttttcaaattgactgattaagtgattatacatattggaggaggtttggtagcatcagatctatgtccagaaaggagaattagagtcta 30915403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 42076165 - 42076110
Alignment:
Q  3 tgattctttcaatga-atagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||    
T  42076165 tgattctttcaatgttatagcttttcaaattgattgattaagttattatacaaatt 42076110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 12531482 - 12531432
Alignment:
Q  150 taacatatatattttttatttaaatggggtgggtattagatttaatttttc 200  Q
    |||||||| |||||||||||||| |||||||||||||||| || |||||||    
T  12531482 taacatatctattttttatttaagtggggtgggtattagagttgatttttc 12531432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 29372412 - 29372359
Alignment:
Q  5 attctttcaat-gaatagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||    
T  29372412 attctttcaattgaataactttccaaattgactgattaaatgattatacaaatt 29372359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 39698079 - 39698130
Alignment:
Q  150 taacatatatattttttatttaaatgg-ggtgggtattagatttaatttttc 200  Q
    ||||||||||||||||||||||| ||| ||||||||||| | ||||||||||    
T  39698079 taacatatatattttttatttaagtggaggtgggtattaaagttaatttttc 39698130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 23567418 - 23567464
Alignment:
Q  153 catatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    |||||||||||||||||||| ||| |||||||| ||| |||||||||    
T  23567418 catatatattttttatttaagtggagtgggtatcagagttaattttt 23567464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 2545957 - 2546037
Alignment:
Q  31 ttgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctaga 112  Q
    |||| |||||||||||||||| || || ||||||||||||||| || ||| |||| |  || ||| ||||||||||||||||    
T  2545957 ttgattgattaagtgattatataattt-ggggtgatttgatagcatgcgaattatgtcaaataaggagaactagagtctaga 2546037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 5971778 - 5971818
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||| |||||||||||||||||||| ||| |||||    
T  5971778 aatagctttttaaattgactgattaagtgatgatagaaatt 5971818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 46221708 - 46221969
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||| ||||||||  |||    
T  46221708 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgattctacaaattaggggtagtttgataggattcgatttatgtacaaaaaagaga 46221807  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  46221808 actagagtctagaaaaaaactcaaacgtatactaaagaaagaaaatgatataacatatatattttttatttaagtaggggtgggtattagatttaatttt 46221907  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  46221908 tcgttagaggtccgtagcatttggaggcccggcctagttgagcaccttgcacaccctcaagg 46221969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 18015587 - 18015839
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| | |    
T  18015587 tgtgattctttcaatgaaatagctttccaaattgattgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaaa 18015686  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||||||||||||   |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18015687 actagagtctaga-aaaaactcaaacatgtactaaagaaagaaaaggatataacatatatattttttatttaagtgggggtgggtattagatttaatttt 18015785  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacac 252  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  18015786 tcgttagaggcccgtaacatttggaggcccggcctggttgagcatcttgcacac 18015839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 8358299 - 8358558
Alignment:
Q  1 tgtgattctttcaatga-atagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| |||    
T  8358299 tgtgattctttcaatgagataactttttaaattgactgattaagtgattatataaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 8358398  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg-gggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||    
T  8358399 actaaagtctagagaaaaactcaaacgtatactaaagaaagaaaatgatataacatatatattttttatttaagtgagggtggatattagatttaatttt 8358498  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    | |||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||    
T  8358499 ttgttagaggcccgtagcatttggaggcccggcctggatgagcaccttgcacaccctcaa 8358558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 33419122 - 33419384
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactga-ttaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaag 98  Q
    |||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||    
T  33419122 tgtgattctttcaatgaaataacttttcaaattgacttaattaagtgattatacaaattaggggtagtttgataggatccgatttatgtacaaaaacaag 33419221  T
Q  99 aactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaatttt 198  Q
    ||||||||||||||   ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  33419222 aactagagtctagaaaaaaactcaaacgtgtattaaagaaagaaaaggatataacatatatattttttatttaagtggggtggttattagatttaatttt 33419321  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||| |||||| |||||||| |||||||| ||||| |||| ||| ||||||| ||||    
T  33419322 tcgttagaggaccgtaatatttggagacccggcctggttgagcaccatgctcaccctcgaggc 33419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 42161125 - 42161389
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgata--ggatccgatttatatacaaaaagaa 97  Q
    |||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||||||| |||||||  |||||| |||||| ||||||||  |    
T  42161125 tgtgattctttcaatgaaatagctttccaaattaactgatcaagtgattatacaaattaggggtggtttgatataggatccaatttatgtacaaaaatga 42161224  T
Q  98 gaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    ||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| || ||||| |||||||    
T  42161225 gaattagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggaggatattaaatttaat 42161324  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||    
T  42161325 ttttcgttagaggcccgtagcatttggaggctcggcctggttgagcaccttgcacaccctcaagg 42161389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 33910123 - 33909863
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  33910123 tgtgattctttcaatgaaatagcttttcaaattgactgattaagcgattatacaaattaggggtgatttgataggatcagatttatgtacaaaaaggaga 33910024  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||  ||||||||||  |||||||||||| | |||||||||||| |  ||||||||||||||| |||||||    
T  33910023 actagagtctagaaaaaaactcaaacgtgtaccgaagaaagaaa--gatataacatat-ttttttttatttaagtgaggggtgggtattagacttaattt 33909927  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    || ||| |||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||    
T  33909926 tttgtttgaggcccgtagcatttggaggcccggcctggttgagcaccttgcacacccccaaggc 33909863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 36796377 - 36796636
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||  ||| |||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||| ||||||||| |||    
T  36796377 tgtgattctttcaatgaaataattttccaaattgactgattaagttattatacaaattaagggtagtttgataggatccgatttatgtacaaaaaggaga 36796476  T
Q  100 actag-agtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaatt 196  Q
    ||||| ||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||    
T  36796477 actagaagtctaga-aaaaactcaaacgtgtactaaagaaag-aaatgatataacatatatattttttatttaaatgggaggtgggtattagattt-att 36796573  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||||||||||| |||||  ||||||||| ||||||| ||||| ||||||||||| ||||||||    
T  36796574 tttcgttagaggtccgtagtatttggagg-ccggcctggttgagcaccttgcacagcctcaagg 36796636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 4100023 - 4099794
Alignment:
Q  5 attctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaacta 103  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |||| ||    
T  4100023 attctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaattaggggtggtttgatag-atccgatttatgtacaaaaaggagaatta 4099925  T
Q  104 gagtctagatttaaa-ctcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaatttttc 200  Q
    | |||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||    
T  4099924 gcgtctagaaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaagtgggaggtgggtattaaatttaatttttc 4099825  T
Q  201 gttagaggcccgtaacatttggaggcccggc 231  Q
    |||||| ||||||| ||||||||| ||||||    
T  4099824 gttagaagcccgtagcatttggagacccggc 4099794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 11672645 - 11672429
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatat--acaaaaagaa 97  Q
    ||||||||||||| |||| || |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||| |    
T  11672645 tgtgattctttcattgaaataactttccaaattgactgattaagtgattatacaaattaggagtggtttgataggatccgatttatatgtacaaaaagga 11672546  T
Q  98 gaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||||    
T  11672545 gaactagagtctagaaaaaaactcaaatgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggtggatattagatttaat 11672446  T
Q  196 ttttcgttagaggcccg 212  Q
    ||||||||| |||||||    
T  11672445 ttttcgttaaaggcccg 11672429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 44894034 - 44894299
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  44894034 tgtgattctttcaataaaatagctttccaaattgattgattaagtgattatacaaattaggggtggtttaataggatccgatttatgtacaaaaagaaga 44894133  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgg----gtattagattta 193  Q
    |||| ||||||||   |||||||||||||||||||||  | | || |||||||||||||||||||||||||||||  |||||||    ||||||||||||    
T  44894134 actatagtctagaaaaaaactcaaacgtgtactaaag-gatataaagatataacatatatattttttatttaaatgaggggtgggtatgtattagattta 44894232  T
Q  194 atttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||  ||||||  ||||| |||||||||||||| ||| ||||| || |||| ||| ||||||||    
T  44894233 attttttcttagagatccgtagcatttggaggcccgacctggttgagcatcttgtacatcctcaagg 44894299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 6380089 - 6380349
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||  || |||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| || |||||||||||||    
T  6380089 tgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaattaggggtggtttgataggatcagattcatgtacaaaaagaaga 6380188  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaa--atggggtgggtattagatttaatt 196  Q
    |||||||||||| |   |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  | || |||| ||||||| ||||||    
T  6380189 actagagtctagaaaaaaaactcaaacgtgtactaaagaaataaaatgatataacatatat-ttttttatttaagtagggagtggatattagacttaatt 6380287  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||| ||| |||||| ||   ||||||||||||||||| ||| | |||||||| | |||||||    
T  6380288 ttttgtttgaggcctgtggtatttggaggcccggcctggttaagcaccttgcgctccctcaa 6380349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 73 - 261
Target Start/End: Original strand, 12251466 - 12251655
Alignment:
Q  73 ggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaa 172  Q
    ||||||||||||| ||||||||| ||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12251466 ggatccgatttatgtacaaaaaggagaactagagtctagaaa-aaactcaaacgtgtactaaagaaagaaaatgagataacatatatattttttatttaa 12251564  T
Q  173 atg--gggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
     ||  |||||||||||||||||||||||| | ||||||| |||| |||||||||| |||||||  ||||  ||||||||||||||||||||    
T  12251565 gtggagggtgggtattagatttaattttttgatagaggctcgtagcatttggaggtccggcctgattgagtaccttgcacaccctcaaggc 12251655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 90 - 258
Target Start/End: Complemental strand, 38525154 - 38524984
Alignment:
Q  90 aaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtatta 187  Q
    ||||| || ||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |  |||||||||    
T  38525154 aaaaaaaaaaactagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaaagatataacatatatattttttatttaagtggagagtgggtatta 38525055  T
Q  188 gatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  38525054 gatttaatttttcgttagaggtccgtagcatttggaggcccggcctggttgagcaccttgcacaccctcaa 38524984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 7636334 - 7636536
Alignment:
Q  4 gattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaact 102  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |||| ||||||| | |||| |    
T  7636334 gattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaattaggggtggtttgataggatcagagttatgtacaaaagggagaagt 7636433  T
Q  103 agagtctag-----atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaat 195  Q
    |||||||||     |   ||||| ||||||||||  || |||||||| ||||||||| |||| |||||||||||| |||  ||||||| ||||| |||||    
T  7636434 agagtctagaagaaaaaaaaacttaaacgtgtaccgaaaaaagaaaaagatataacacatat-ttttttatttaagtgggaggtgggtgttagacttaat 7636532  T
Q  196 tttt 199  Q
    ||||    
T  7636533 tttt 7636536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 40001701 - 40001946
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||| | | ||||||| | || | ||||||    
T  40001701 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattggaggtggtttgatagtaccagatttatgttcagatagaaga 40001800  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   || ||||||||||   |||||||           ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  40001801 actaaagtctaga-aaaacctcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtaggggtgggtattagagttaatttt 40001886  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
       ||  |||||| || | |||||||||||||| || |||| |||||||||| | ||||||||    
T  40001887 ---ttttaggcccatagcttttggaggcccggcttaattgagcaccttgcactctctcaaggc 40001946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 26282547 - 26282793
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | | ||||||| | || | || |||    
T  26282547 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgtgcagataggaga 26282646  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  26282647 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtgggggtgggtattagagttaatttt 26282732  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |  |  ||||||  || | |||||||||||||| |  ||||  ||||||||| ||||||||||    
T  26282733 t--tctgaggcctatagcttttggaggcccggcttgattgagtaccttgcactccctcaaggc 26282793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 32956834 - 32956670
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||  ||||||||||||||| |||||||| ||||| |||||| |||||||| ||| ||||||| | || |||| |||    
T  32956834 tgtgattctttcaatgaaataactttataaattgactgattaaatgattataaaaattgggggtggtttgatagcatcagatttatgtccagaaaggaga 32956735  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttt 164  Q
    ||||||||||| |   ||||||||||||||||  ||||||||||| ||  |||||||||| ||||    
T  32956734 actagagtctaaaaaaaaactcaaacgtgtaccgaagaaagaaaaagaagtaacatatatttttt 32956670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 26633422 - 26633227
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||| ||| |||| |||  |||||| | || |||| |||    
T  26633422 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggtggttttatagcatcaaatttatgtccagaaagtaga 26633323  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||| ||||||||  ||||||||||| ||  |||||| || ||||||  || |  |||||||||||||| | |||||||    
T  26633322 actagagtctaga-aaaaactcatacgtgtaccgaagaaagaaaaagaagtaacatgta-atttttctttaagttggggtgggtattatacttaattt 26633227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 260
Target Start/End: Complemental strand, 25061957 - 25061702
Alignment:
Q  6 ttctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactag 104  Q
    ||||||||||||| |||||||||||||| |||||| |||||||| ||||||||  |  |  |||||||| ||| ||||||| | ||||||||||||||||    
T  25061957 ttctttcaatgaaatagcttttcaaattaactgataaagtgattgtacaaattgagaatagtttgatagcatcagatttatgtccaaaaagaagaactag 25061858  T
Q  105 agtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacata-tatattttttatttaa--atggggtgggtattagatttaatttttcg 201  Q
    |||||| |   ||| | ||||||||||  ||||||||||| ||  ||||||| | | ||||||||||||  | ||||||| ||||||| |||||||||      
T  25061857 agtctaaa--aaaattaaaacgtgtaccgaagaaagaaaaagaagtaacatatttttttttttatttaagtagggggtggatattagacttaattttt-t 25061761  T
Q  202 ttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||  |||||| ||| ||||||||| ||||| | ||||| |||||||||| ||| |||||    
T  25061760 ttttaggcccataatatttggaggtccggcttggttgagcaccttgcactcccccaagg 25061702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 27432476 - 27432390
Alignment:
Q  174 tggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||||| ||||| |||||| |||||||||||||    
T  27432476 tggggtgggtattaaatttaatttttcgttagaggcccgtagcatttgaaggccgggcctggttgagcaccttacacaccctcaagg 27432390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 773889 - 773974
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttat 85  Q
    ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| |||||||    
T  773889 tgtgattctttcaataaaatagcttttcaaattgactgataaagtaattatacaaattaggggtgatttgatagcatcagatttat 773974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 41908237 - 41908064
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatac-aaaaagaag 98  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||| |||||||| | |||| ||||| || ||| ||||||| | | |||||  ||    
T  41908237 tgtgattctttcaatgaaacagcttttctaattgactgattaagtgattgtacaaattggaggtggtttgaaagcatcagatttatgtccaaaaaatgag 41908138  T
Q  99 aactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaa 173  Q
    ||| |||||| |||   |||||||||| |||||  ||||||||||| ||  |||||||| | |||||||||||||    
T  41908137 aaccagagtcaagaaaaaaactcaaacatgtaccgaagaaagaaaaagaagtaacatat-ttttttttatttaaa 41908064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12251293 - 12251365
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgata 72  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||||||| |||||||    
T  12251293 tgtgattctttcaatgaaatagctttccaaattgactgattaaatgattatagaaattaggggtggtttgata 12251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30739182 - 30739038
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||| |||||   | || |||||||| ||||||||||| | || |||| |||    
T  30739182 tgtgattcttttaatgaaataacttttcaaattgactgattaagtgattataaaaattgaagatggtttgatagcatccgatttatgtccagaaaggaga 30739083  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaa 144  Q
    | | || ||||||   ||||||||||||||||  || ||||||||    
T  30739082 attggaatctagaaaaaaactcaaacgtgtaccgaaaaaagaaaa 30739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36438356 - 36438468
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||    ||| |||||||| |||  |||||| | || |||| |||    
T  36438356 tgtgattctttcaatgaaatggtttttcaaattgactgattaagtgattatacaaattgatagtggtttgatagcatcaaatttatgtccagaaagtaga 36438455  T
Q  100 actagagtctaga 112  Q
    ||||||| |||||    
T  36438456 actagagcctaga 36438468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 40737996 - 40738108
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||   |||| |||||||| |||  |||||| |  |||||| |||    
T  40737996 tgtgattctttcaataaaatagctttttaaattgactgattaagtaattatacaaattgatggtggtttgatagcatcaaatttatgtcaaaaaagtaga 40738095  T
Q  100 actagagtctaga 112  Q
    |||||||| ||||    
T  40738096 actagagtttaga 40738108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 1366068 - 1365822
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||| ||||| || ||||||||||||||||||||||| ||||||| |||| |  ||| |||||||| | |  |||||| | || | || |||    
T  1366068 tgtgattctttctatgaaataacttttcaaattgactgattaagtcattataccaattggtagtggtttgatagtaccaaatttatgtccagataggaga 1365969  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttt-tatttaaatggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||||       |||||       |||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  1365968 actaaagtctagaag-aaactcaaacgtgta-------aagaag------taacatatatatttttatatttaagtggggtgggtattagagttaatttt 1365883  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |  |  ||||||| ||   |||||||||||||| |  |||| |||||||||| ||||||||||    
T  1365882 t--tcggaggcccatagattttggaggcccggcttgattgagcaccttgcactccctcaaggc 1365822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9479186 - 9479074
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||| ||| ||| |||| ||||||||||||||||| ||||||||||||   |||| |||||||| |||  |||||| | || |||| |||    
T  9479186 tgtgattctttcaacgaaatagttttttaaattgactgattaagtaattatacaaattgatggtggtttgatagcatcaaatttatgtccagaaagtaga 9479087  T
Q  100 actagagtctaga 112  Q
    |||||||| ||||    
T  9479086 actagagtttaga 9479074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 44877006 - 44877061
Alignment:
Q  206 aggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||| |||||||||||||| || |||||||||| ||||||||||    
T  44877006 aggcccgtaacatttgaaggcccggcctagtagagcaccttgcactccctcaaggc 44877061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18895402 - 18895460
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatta 58  Q
    |||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||    
T  18895402 tgtgattctttcaatgaaataactttttaaattgactgattaattgattatacaaatta 18895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42312068 - 42312012
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaat 56  Q
    ||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||    
T  42312068 tgtgattcttttaatgaaatagcttttcaaattgactaatcaagtgattatacaaat 42312012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 239
Target Start/End: Original strand, 40841289 - 40841491
Alignment:
Q  39 ttaagtgattatacaaattagg-ggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaaga 137  Q
    |||||| ||||||||||||||| |||| |||||||  |||  |||||| | ||||||||| || |||||||||||   |||||||||| |||||| ||||    
T  40841289 ttaagtaattatacaaattaggaggtggtttgataacatcatatttatgtccaaaaagaataattagagtctagaaa-aaactcaaacatgtactgaaga 40841387  T
Q  138 aagaaaatgatataacatatatatt---ttttatttaaatggg--gtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcc 232  Q
    ||||||| ||   ||||||||| ||   |||||||| | ||||  |||||||||| | ||||||||   ||  |||||| ||  |||||||||||||||     
T  40841388 aagaaaaagaagaaacatatattttttattttatttcagtggggtgtgggtattaaacttaatttt---ttttaggcccatagtatttggaggcccggct 40841484  T
Q  233 tagttga 239  Q
    |||||||    
T  40841485 tagttga 40841491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 25610014 - 25609964
Alignment:
Q  150 taacatatatattttttatttaaatgg-ggtgggtattagatttaattttt 199  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  25610014 taacatacatattttttatttaaatggaggtgggtattagagttaattttt 25609964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 18676316 - 18676581
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||| ||||||||| |||    
T  18676316 tgtgattctttcaatgaaatagctttccaaattgactgattaagttattatacaaattaggggtagtttgataggatccgatttatgtacaaaaaggaga 18676415  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  18676416 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtgaggggtgggtattagatttaattt 18676515  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggctg 263  Q
    |||||||||  |||||| |||||||| ||||||||| ||||| |||||||||||| ||||||||||    
T  18676516 ttcgttagaaacccgtagcatttggatgcccggcctggttgagcaccttgcacactctcaaggctg 18676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 19367424 - 19367683
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| |||    
T  19367424 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgatagaatccgatttatgtacaaaaaggaga 19367523  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| ||    
T  19367524 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaaatgggggataggtattagatttaa-tt 19367622  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||||||||| |||||| |||||||||||||| ||| ||||| ||||||||||||||||||    
T  19367623 ttcgttagagacccgtagcatttggaggcccgacctggttgagcaccttgcacaccctcaa 19367683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 26151752 - 26152014
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  26151752 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 26151851  T
Q  100 actag-agtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaattt 197  Q
    ||||| ||||||||   |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  26151852 actagaagtctagaaaaaaactcaaacgtatactaaagaaagaaaaggatataacatatatattttttatttaaatgggggtgggtattagattt-attt 26151950  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||| |||||| |||||||||||||| ||| ||||| || ||||||||||||||||||    
T  26151951 ttcgttagagacccgtagcatttggaggcccgacctggttgagcatcttgcacaccctcaaggc 26152014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 13020482 - 13020218
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||    
T  13020482 tgtgattctttaaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaagaga 13020383  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata-ttttttatttaaat-ggggtgggtattagatttaatt 196  Q
    |||||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||| ||||||||    
T  13020382 actagagtctagaaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatatttttttatttaagtgggggtgggtattaaatttaatt 13020283  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||||| || ||||||||||| ||| ||||| |||||||||||||||||||||    
T  13020282 tttcgttagaggcccgtagcaattggaggcccgccctggttgagcaccttgcacaccctcaaggc 13020218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 25222382 - 25222119
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||  ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||    
T  25222382 tgtgattctttcaatgaaataactttctaaattgactaattaagtgattatacaaattaggaatgatttgataggatccgatttatgtacaaaaaggaga 25222283  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaa--atggggtgggtattagatttaattt 197  Q
    |||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| |||||||||||||||||    
T  25222282 actaaagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtaggcggtcggtattagatttaattt 25222183  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||| || |||||||||||    
T  25222182 ttcgttagaggcccgtagcatttggaggcccggcctggttgagcacctttcataccctcaaggc 25222119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 42411563 - 42411822
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  42411563 tgtgattctttaaatgaaatagctttccaaattgactaattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 42411662  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| |||||  |||||||||||||||||||    
T  42411663 actagagtctaga-aaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatatattttttttaagtgggggttgggtattagatttaattt 42411761  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||||||||||| | || || |||||||||||||||  |||| ||||||||||||||||||    
T  42411762 ttcgttagaggctcttagcaattggaggcccggcctgattgagcaccttgcacaccctcaa 42411822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 45619035 - 45618774
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  45619035 tgtgattctttcaatgaaatagcttc-caaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 45618937  T
Q  100 actag-agtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata-ttttttatttaaat--ggggtgggtattagatttaat 195  Q
    ||||| ||||||||   |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||    
T  45618936 actagaagtctaga-aaaaactcaaacgtatactaaagaaagaaaaggatataacatatatatttttttatttaaatggggggtgggtattagattt-at 45618839  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||    
T  45618838 ttttcgttagaggcccgtagcatttggaggcccggcctggctgagcaccttgcacaccctcaagg 45618774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 6530718 - 6530456
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||  |||    
T  6530718 tgtgattctttcaatgaaataccttttcaaattgactgattaagtgattatacaaattaggggtggtttgatagtatccgatttatgtacaaaaatgaga 6530619  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||||||||||||   ||||| |||| | |||||||||||||||| |||||||| |||||||||||||||||| | ||||||| ||||||||||||||||    
T  6530618 actagagtctagaaaaaaacttaaacatctactaaagaaagaaaaggatataacgtatatattttttatttaagtgggggtggatattagatttaatttt 6530519  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||| ||||| |||| |||| || ||||| |||||| ||||||||||||||    
T  6530518 tcgttagaggcccgtatcatttagaggtccggtctcgttgagcaccttacacaccctcaaggc 6530456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 7993691 - 7993433
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||    
T  7993691 tgtgattctttcaatgaaatagctttccaaattggctgattaagtgattatacaaattaggggtggtttgataggatccggtttatgtacaaaaaggaga 7993592  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  7993591 actagagtctaga-aaaaactcaaatgtgtactaaagaaagaaaaggatataacatatatattttttatttaaatagggggtgggtattaaatttaattt 7993493  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||| | ||| ||||||||||||||| |   |||| ||||||||||||||||||    
T  7993492 ttcgttagagg-ctgtagcatttggaggcccggtcagattgagcaccttgcacaccctcaa 7993433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 41096543 - 41096806
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  41096543 tgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaattaggggtgatttgataggatctgatttatgtacaaaaaggaga 41096642  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatat-tttttatttaaat--ggggtgggtattagatttaatt 196  Q
    |||||||||||||   ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |  ||||||||||||| ||||||||    
T  41096643 actagagtctagaaaaaaactcaaatgtgtactaaagaaagaaaaggatataacatatatatatttttatttaagtggggggtgggtattaaatttaatt 41096742  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||||||| |||||| ||||| |||| |||||||  ||||  |||||||||||| ||||||    
T  41096743 tttcgttagagacccgtagcatttagaggtccggcctgattgagtaccttgcacaccttcaagg 41096806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 44 - 261
Target Start/End: Original strand, 42759797 - 42760015
Alignment:
Q  44 tgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaa 143  Q
    |||||||| |||||| ||||| ||||||| |||||||||||| ||||||||| |||||||||||||| |   ||||||||||||||||||||||||||||    
T  42759797 tgattataaaaattatgggtggtttgatatgatccgatttatgtacaaaaaggagaactagagtctaaaaaaaaactcaaacgtgtactaaagaaagaaa 42759896  T
Q  144 atgatataacatatata-ttttttatttaaatggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatca 242  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||    
T  42759897 atgatataacatatatatttttttatttaagtggggtggatattagatttaatttttcgttagaggcctgtagcatttggaggcccgacctagttgagca 42759996  T
Q  243 ccttgcacaccctcaaggc 261  Q
    ||||| |||||||||||||    
T  42759997 ccttgtacaccctcaaggc 42760015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 38 - 259
Target Start/End: Complemental strand, 36481425 - 36481204
Alignment:
Q  38 attaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaaga 137  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| |||| ||||||||| |   ||||||||| ||||||||| ||    
T  36481425 attaagtgattatacaaattaggggtggtttgaaaggatccaatttatgtacaaaaaggagaattagagtctaaaag-aaactcaaatgtgtactaa-ga 36481328  T
Q  138 aagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctag 235  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  36481327 aagaaaatgatataacatatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaggtccggcctgg 36481228  T
Q  236 ttgatcaccttgcacaccctcaag 259  Q
    |||| |||||||||||||||||||    
T  36481227 ttgagcaccttgcacaccctcaag 36481204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 4856052 - 4855786
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatat-acaaaaagaag 98  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||| ||    
T  4856052 tgtgattctttcaatgaaatagctttccaaattcactgattaagtgattatacaaattaggggtggtttgataggatctgatttatgttacaaaaaggag 4855953  T
Q  99 aactagag-tctagatttaaa-ctcaaacgtgtactaaagaaagaaaatgatataacatatatatttttt-atttaaatgg--ggtgggtattagattta 193  Q
    ||||| |  ||||||   ||| ||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  4855952 aactaaaaatctagaaaaaaaactcaaacgtgtacgaaagaaagaaagggatataacatatatatttttttatttaaatggagggtgggtattagattta 4855853  T
Q  194 atttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
     ||||||||||||||||||||  ||||||||| ||||||| ||||| |||||||||||||||||||||    
T  4855852 -tttttcgttagaggcccgtagaatttggaggtccggcctggttgagcaccttgcacaccctcaaggc 4855786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 27 - 258
Target Start/End: Complemental strand, 45042421 - 45042187
Alignment:
Q  27 caaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctag-atttaaactcaaac 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| ||| ||||||||||||||||||||| |   ||||||||||    
T  45042421 caaattgactgattaagtgattatacaaattaggggtggtttgataggatcaaatttatgtacgaaaagaagaactagagtctagaaaaaaaactcaaac 45042322  T
Q  126 gtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatttttcgttagaggcccgtaacatttgga 223  Q
    || |||| ||||||||||||||||| |||||||| ||||||||||||||  || |||||||||||| ||||||||| ||| ||||||| |||||||||||    
T  45042321 gtatactgaagaaagaaaatgatatgacatatattttttttatttaaataaggagtgggtattagacttaattttttgtttgaggcccataacatttgga 45042222  T
Q  224 ggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||||| |||  |||| |||||||| | |||||||    
T  45042221 ggcccgacctgattgagcaccttgcgctccctcaa 45042187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 2063864 - 2063616
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||   |||||| ||||||||| | |    
T  2063864 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggattatatttatgtacaaaaaggaaa 2063765  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    ||||||||||| |   |||||||||||| |||  ||||||||||| ||||||| || | | || ||||||||| |||||||||||||||| |||||||||    
T  2063764 actagagtcta-aaaaaaactcaaacgtataccgaagaaagaaaaggatataatat-ttttttatttatttaagtggggtgggtattagacttaattttt 2063667  T
Q  200 cgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcac 250  Q
     ||| ||||||||||  |||||||||||||| || ||||| ||||||||||    
T  2063666 tgtttgaggcccgtagtatttggaggcccggtctggttgaacaccttgcac 2063616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 12269466 - 12269279
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagattta 116  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||||  |||||||||||||| |   |    
T  12269466 aatagctttccaaatc-actgattaagtgattatacaaattaggggtggtttgataggatctgatttatgtgcaaaaaagagaactagagtcta-aaaaa 12269369  T
Q  117 aactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaa-atggggtgggtattagatttaatttttcgttag 205  Q
    || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  12269368 aattcaaatgtgtactaaagaaaaaaaatgatataacatatatattttttatttaagctggggtggatattagatttaatttttcgttag 12269279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 34061861 - 34062015
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||| ||||| |||||||||| | ||||||| |||||||||||||    
T  34061861 tgtgattctttcaatgaaatagctttccaaattgactgattaagtaatcatacaaattatgggtggtttgataggaccagatttatgtacaaaaagaaga 34061960  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacat 155  Q
    |||| |||||| |   ||||||| ||||||||| ||||||||||| ||||||||||    
T  34061961 actatagtcta-aaaaaaactcatacgtgtactgaagaaagaaaaagatataacat 34062015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 39081453 - 39081314
Alignment:
Q  5 attctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaacta 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||   |||| |||||||| |||  |||||| | || |||| | |||||    
T  39081453 attctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccagaaagtaaaacta 39081354  T
Q  104 gagtctagatttaaactcaaacgtgtactaaagaaagaaaa 144  Q
    |||||||||   ||||||| ||||||||| |||||| ||||    
T  39081353 gagtctaga-aaaaactcatacgtgtactgaagaaaaaaaa 39081314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 15457559 - 15457314
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||  |||||||| | | ||||||| | |  | |   ||    
T  15457559 tgtgattctttcaataaaatagcttttcaaattgactgattaagtgattatacaaattgggggtagtttgatagtaccagatttatgtccggataagtga 15457460  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  15457459 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtgggggtgggtattagagttaatttt 15457374  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||    ||||||| |||| |||||||||||||| |  |||| |||||||||| | ||||||||    
T  15457373 tc---tgaggcccataacttttggaggcccggcttgattgagcaccttgcactctctcaaggc 15457314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18172945 - 18173018
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  18172945 tgtgattctttcgatgaaatagcttttcaaattgagtgattaagtgattatacaaattaggggtggtttgatag 18173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21747235 - 21747347
Alignment:
Q  1 tgtgattctttcaatga-atagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||| |||||| |||||||| | | ||||||| | || | ||||||    
T  21747235 tgtgattctttcaatgacatagtattttaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgttcagatagaaga 21747334  T
Q  100 actagagtctaga 112  Q
    |||| ||||||||    
T  21747335 actaaagtctaga 21747347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1418968 - 1418832
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||   |||| |||||||| || | | |||| |  |||||| |||    
T  1418968 tgtgattctttcaatgaaatagctttacaaattgactgattaagtgattatacaaattgatggtggtttgatagcat-caaattatgtctaaaaagtaga 1418870  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaa 138  Q
    |||||||||||||   ||||||| ||||||||| |||||    
T  1418869 actagagtctaga-aaaaactcatacgtgtactgaagaa 1418832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 31273173 - 31273357
Alignment:
Q  3 tgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaac 101  Q
    ||||||||| |||||| |||  || |||||||||||||||| |||||||||||||| |||||| |||||||  |||  |||||  | || |||| ||| |    
T  31273173 tgattcttttaatgaaatagtattccaaattgactgattaaatgattatacaaatt-ggggtggtttgataacatcaaatttaagtccagaaaggagagc 31273271  T
Q  102 tagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtatta 187  Q
    | |||| || |   ||||||||| || |||||||||||||||||||| ||||||||||||||||||||| | | |||||||||||||    
T  31273272 tggagtatacaaa-aaactcaaatgtatactaaagaaagaaaatgatgtaacatatatattttttatttgagtgggggtgggtatta 31273357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18916059 - 18916245
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| ||| || |||||||| | | ||||||| | || |  |||||    
T  18916059 tgtgattctttcagtgaaatagcttttcaaattgattgattaagtgattatacaaattggggatggtttgatagtaccagatttatgtccagattgaaga 18916158  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   || ||||||||||||  ||||             ||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  18916159 actaaagtctagaaa-aacctcaaacgtgtaaaaaag-------------taacatatatattttttatttaagtgggggtgggtattagagttaatttt 18916244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27302533 - 27302645
Alignment:
Q  1 tgtgattctttcaatga-atagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||  |||||||||| ||| |||  |||| | | || | ||||||    
T  27302533 tgtgattcttttaatgatatagcttttcaaattgaccgattaagtgattatacaaattgagggtgatttggtagcatcgaatttttgtccagacagaaga 27302632  T
Q  100 actagagtctaga 112  Q
    | |||||||||||    
T  27302633 attagagtctaga 27302645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 36059910 - 36060087
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||   |||| |||||||| |||  |||| | |  |||||| |||    
T  36059910 tgtggttctttcaatgaaatagctttttaaattaactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttttgtctaaaaagtaga 36060009  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg 178  Q
    |||||||||||||   ||||| | ||| |||| |||||||||||| ||  |||||| ||  ||||| |||||| |||||    
T  36060010 actagagtctaga-aaaaacttatacgcgtaccaaagaaagaaaaagaagtaacatgtaattttttaatttaagtgggg 36060087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38985714 - 38985787
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| | |||| ||||||||    
T  38985714 tgtgattctttcaatgaaatagcttttcaaattgattgattaaatgattatacaaattggaggtggtttgatag 38985787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 38599459 - 38599404
Alignment:
Q  3 tgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  38599459 tgattctttcaatgaaatagtttttcaaattgattgattaagtgattatacaaatt 38599404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13997373 - 13997316
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||    
T  13997373 tgtgattctttcaatgaaatagtttttcaaattgactcattaagtgattattcaaatt 13997316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 1226289 - 1226465
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagattta 116  Q
    |||| |||||||||||| |||||| |||||||||| |||||  ||||| |||| ||| ||| ||||||| | |  |||| |||| |||||||||||   |    
T  1226289 aataacttttcaaattgtctgattgagtgattatataaattgagggtggtttggtagcatcagatttatgtcc--aaaggagaattagagtctaga-aaa 1226385  T
Q  117 aactcaaacgtgtactaaagaaagaaaatgatataacatatata--ttttttatttaaatggggtg-ggtattagatttaattt 197  Q
    |||||||||||||||      ||||||| ||  |||||||||||  |||||||||||| ||||||| ||||||||| |||||||    
T  1226386 aactcaaacgtgtac----cgaagaaaaagaagtaacatatatattttttttatttaagtggggtgtggtattagacttaattt 1226465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 17117778 - 17117828
Alignment:
Q  150 taacatatatattttttatttaaat-ggggtgggtattagatttaattttt 199  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  17117778 taacatatatattttttatttaagtgggggtgagtattagatttaattttt 17117828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 18173080 - 18173130
Alignment:
Q  150 taacatatatattttttatttaaat-ggggtgggtattagatttaattttt 199  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  18173080 taacatatatattttttatttaagtgggggtgggtattagagttaattttt 18173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 38985849 - 38985899
Alignment:
Q  150 taacatatatattttttatttaaatggggt-gggtattagatttaattttt 199  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  38985849 taacatatatattttttatttaagtggggtggggtattagagttaattttt 38985899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17117650 - 17117691
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgatta 41  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  17117650 tgtgattctttcaatgaaatagcttttcaaattgactgatta 17117691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29480642 - 29480699
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||  |||||||||||||||| |||||| |||| ||||||    
T  29480642 tgtgattctttcaatgaaataatttttcaaattgactgaataagtgtttattcaaatt 29480699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 2618414 - 2618155
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||    
T  2618414 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaagaga 2618315  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  2618314 actaaagtctaga-aaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggtgggtattagatttaattt 2618216  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||  |||||||||||||||||||||| |||| ||| ||||| |||||||||||| |||||    
T  2618215 ttcaatagaggcccgtaacatttggagacccgacctggttgagcaccttgcacactctcaa 2618155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 6360818 - 6360558
Alignment:
Q  1 tgtgattctttcaatgaatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||  ||||    
T  6360818 tgtgattctttcaatgaataacttttcaaattgactgattaagtgattatacaaattaagggtggtttgataggatccgatttatgtgcaaaaaagagaa 6360719  T
Q  101 ctagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatttt 198  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||| |||    
T  6360718 ctagagtctaga-aaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggtggatattagatttaa-ttt 6360621  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||| |||||||||||| |||||  |||| |||||||||||||||||||||    
T  6360620 tcgttagaggcccgtagcatttggaggcctggcctgattgagcaccttgcacaccctcaaggc 6360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 3514855 - 3515119
Alignment:
Q  1 tgtgattctttcaatga-atagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||    
T  3514855 tgtgattctttcaatgatatagctttccaaattgaatgattacgtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaggaga 3514954  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata-ttttttatttaaat--ggggtgggtattagatttaatt 196  Q
    |||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  |||||| |||||| ||||||||    
T  3514955 actagagtttagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttttatttaagtggggggtgagtattaaatttaatt 3515054  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||||| |||||| ||||||||| | ||||| |||||||||||||||||||||    
T  3515055 tttcgttagaggcccgtagcatttgtaggcccggcttggttgagcaccttgcacaccctcaaggc 3515119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 6754265 - 6754003
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||  |||    
T  6754265 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgactatacaaattagggatggtttgataggatccgatttatgtacaaaaaagaga 6754166  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggg--gtgggtattagatttaattt 197  Q
    |||||| ||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||| |||||||| |||||||    
T  6754165 actagaatctaga-aaaaactcaaacgcgtactaaagaaagaaaatgatataacatatatattttttatttaagtggggagtgagtattagaattaattt 6754067  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||| |||||||||||| |||||||||| ||| |||  |||| ||||||||||| |||||||||    
T  6754066 ttcgatagaggcccgtagcatttggaggtccgacctgattgaacaccttgcacatcctcaaggc 6754003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 29401199 - 29400939
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||| ||||||||  | |    
T  29401199 tgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatactaattaggggtagtttgataggattcgatttatgtacaaaaatgaaa 29401100  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg-ggtgggtattagatttaatttt 198  Q
    ||||||||| |||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  29401099 actagagtcaagaaaaaaactcaaacgtgtactaaagaaagaaaatgatatgacatatatattttttatttaagtggaggtgggtattatatttaatttt 29401000  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaag 259  Q
    | |||||||||||||| ||||||||  ||||  ||  |||| |||||||||||||||||||    
T  29400999 ttgttagaggcccgtagcatttggaaacccgatctgattgagcaccttgcacaccctcaag 29400939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 7525171 - 7525434
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || || |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| | |||    
T  7525171 tgtgattctttcaataaaataactttccaaattgactgattaagtgattatacaaattatgggtggtttgataggatccgatttatgtacaaaatggaga 7525270  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaag-aaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatt 196  Q
    |||||||||||||   ||||||||||||||||||||| ||| |||| ||||||| ||||| ||||||||||||| |  |||||| |||||||||||||||    
T  7525271 actagagtctagaaaaaaactcaaacgtgtactaaagaaaaaaaaaggatataatatataaattttttatttaagtggggggtgagtattagatttaatt 7525370  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||||||| |||||| ||||||||||||| | || ||||| || |||  ||||||||||||    
T  7525371 tttcgttagagacccgtagcatttggaggccccgtctggttgagcatcttatacaccctcaagg 7525434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 57747 - 57498
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| |||    
T  57747 tgtgattctttgaatgaaatagctttctaaattgactgattaagtgattatacaaattatgggtggtttgataggatcagatttatgtacaaaaaggaga 57648  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggg--gtgggtattagatttaattt 197  Q
    |||||||| || |   ||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||| |||||||    
T  57647 actagagtttaaaaaaaaactcaaacgtgtaccgaagaaagaaaatgatataacatatatatcttttatttaagtggggagtgggtattagacttaattt 57548  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttg 247  Q
    || ||| |||||||||| |||||||||| ||| ||| ||||| |||||||    
T  57547 tttgtttgaggcccgtagcatttggaggtccgacctggttgagcaccttg 57498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 12614721 - 12614885
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  12614721 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 12614820  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttt 166  Q
    ||||||||||| |   |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  12614821 actagagtcta-aaaaaaactcaaacgtgtactaaa-aaagaaaaggatataacatatatatttttt 12614885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 261
Target Start/End: Complemental strand, 24455220 - 24455016
Alignment:
Q  58 aggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatat 157  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||   ||| ||||||||||||||||| |   ||| ||||||||||||    
T  24455220 aggggtggtttgataggatccgatttatatataaaaaggagaactagagtctagaaaaaaattcaaacgtgtactaaaggatataaa-gatataacatat 24455122  T
Q  158 atattttttatttaaatgggg--tgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccct 255  Q
    ||||||||||||||| |||||  |||||||||||||||||||||| ||||||| ||||| |||||||||||||| ||| ||||| |||||||||||||||    
T  24455121 atattttttatttaagtggggggtgggtattagatttaatttttcattagaggtccgtagcatttggaggcccgacctggttgagcaccttgcacaccct 24455022  T
Q  256 caaggc 261  Q
    ||||||    
T  24455021 caaggc 24455016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 261
Target Start/End: Original strand, 31258543 - 31258726
Alignment:
Q  80 atttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat---gg 176  Q
    |||||| ||||||||| | || |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |   ||    
T  31258543 atttatgtacaaaaaggataattagagtctagaaa-aaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttatgtggggg 31258641  T
Q  177 ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  31258642 ggtgggtattagatttaatttttcgttagaggcccgtagcatttgtaggtccggcctggttgagcaccttgcacaccctcaaggc 31258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29149462 - 29149316
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||    
T  29149462 tgtgattctttcaatgaactaactttccaaattgactgattaagtgattatacaaattaggtgtggtttgataggatccgatttatgtacaaaaaggaga 29149363  T
Q  100 actagagtctagattta---aactcaaacgtgtactaaagaaagaaa 143  Q
    |||||||||||||   |   |||||||||||||||||||||||||||    
T  29149362 actagagtctagaaaaaaacaactcaaacgtgtactaaagaaagaaa 29149316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 628100 - 628254
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | |||||||||  ||    
T  628100 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataagatctgatttgtgtacaaaaaggtga 628199  T
Q  100 actagagtctagattt-aaactcaaacgtgtactaaagaaagaaaatgatataac 153  Q
    |||||||||||||    ||| |||||| |||||||||||||||| | ||||||||    
T  628200 actagagtctagaaaagaaaatcaaacatgtactaaagaaagaagaggatataac 628254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 12622144 - 12622230
Alignment:
Q  177 ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggctg 263  Q
    ||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  12622144 ggtggatattagatttaattttttgttagaggtccgtagcatttggaggcccggcctggttgagcaccttgcacaccctcaaggctg 12622230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3748573 - 3748683
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||   || | |||||||| |||  |||||| | ||||||| |||    
T  3748573 tgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaattgatggcggtttgatagcatcaaatttatgtccaaaaagtaga 3748672  T
Q  100 actagagtcta 110  Q
    |||||| ||||    
T  3748673 actagaatcta 3748683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 30915371 - 30915539
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||   || | |||||||| |||  |||||| | || |||| |||    
T  30915371 tgtgattctttcaattaaatagcttttcaaattgactgattaagtaattatacaaattgatgggggtttgatagcatcaaatttatgtccagaaagtaga 30915470  T
Q  100 actagagtctag--atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttt 166  Q
    ||||||||||||  |   ||||||| ||| |||| ||||||||||||  || |||||| ||| ||||||    
T  30915471 actagagtctagaaaaaaaaactcatacgagtaccaaagaaagaaaaatatgtaacatgtatttttttt 30915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31861060 - 31860989
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgata 72  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  31861060 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaatt-ggggtggtttgata 31860989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 21946161 - 21946109
Alignment:
Q  6 ttctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  21946161 ttctttcaatgaaatagcttttcaaatagactgattaagtgattatacaaatt 21946109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1690638 - 1690741
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||  |||||||||||| |||| ||||||||||||||||| | |||| |||||||| | | ||||||| | |||| || |||    
T  1690638 tgtgattctttcaatgaaataaattttcaaattgattgatcaagtgattatacaaattggtggtggtttgatagtaccagatttatgtccaaataggaga 1690737  T
Q  100 acta 103  Q
    ||||    
T  1690738 acta 1690741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 1093181 - 1093290
Alignment:
Q  150 taacatatatattttttatttaaat-ggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgc 248  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||||||  |  ||||||| |||  |||| ||||||| | || |||| ||||||||    
T  1093181 taacatatatagtttttatttaagtgggggtgggtattagagttaattttt--tcggaggcccataaattttgaaggcccgacttaattgagcaccttgc 1093278  T
Q  249 acaccctcaagg 260  Q
    || |||||||||    
T  1093279 actccctcaagg 1093290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 31234953 - 31234913
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  31234953 aatagcttttcaaattgattgattaagtgattatacaaatt 31234913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14893422 - 14893509
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatat 87  Q
    ||||||||||| || ||| ||| |||||||||||||||||||||| ||||||||||||  | ||  |||||||| ||| |||||||||    
T  14893422 tgtgattcttttaacgaaatagtttttcaaattgactgattaagtaattatacaaattcagagttgtttgatagcatcagatttatat 14893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 22503798 - 22503725
Alignment:
Q  5 attctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccga 80  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||   ||||| | ||| |||||||||||||||    
T  22503798 attctttcaacgaaatagtttttcaaattgactgattaagtgattat---aattatgagtggtttgataggatccga 22503725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19231671 - 19231529
Alignment:
Q  1 tgtgattctttcaatga-atagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||| ||||||||  ||||||||||||||||| ||||||||||| ||||||||||   |||  |||||||| | | ||||||| | || |||| |||    
T  19231671 tgtgattttttcaatgtcatagcttttcaaattgattgattaagtga-tatacaaattgaaggtagtttgatagcaccagatttatgtccagaaagtaga 19231573  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaa 144  Q
    |||| | ||||||   |||||||||||||| || |||||| ||||    
T  19231572 actaaactctaga-aaaaactcaaacgtgtcctgaagaaaaaaaa 19231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 29308611 - 29308658
Alignment:
Q  153 catatatattttttatttaaat-ggggtgggtattagatttaattttt 199  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||    
T  29308611 catatatattttttatttaagtgggggtgggtattagagttaattttt 29308658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 31860926 - 31860815
Alignment:
Q  150 taacatatatattttttatttaaat-ggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgc 248  Q
    ||||||||||||||||||||||  | ||||||||||||||| |||||||||  ||  |||||| || | ||| |||| ||||| |  |||| ||||||||    
T  31860926 taacatatatattttttatttaggtgggggtgggtattagagttaatttttttttttaggcccatagcttttcgaggtccggcttgattgagcaccttgc 31860827  T
Q  249 acaccctcaagg 260  Q
    |  |||||||||    
T  31860826 attccctcaagg 31860815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 1690774 - 1690824
Alignment:
Q  150 taacatatatattttttatttaaatgg-ggtgggtattagatttaattttt 199  Q
    |||||||||||| |||||||||| ||| ||||||||||||| |||||||||    
T  1690774 taacatatatatattttatttaagtggaggtgggtattagagttaattttt 1690824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29308472 - 29308529
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||  ||||||||| ||| |||||||||||||||||||||| ||||||| ||||    
T  29308472 tgtgattacttcaatgaaatagtttttcaaattgactgattaagtcattataccaatt 29308529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 32056102 - 32056065
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaa 54  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  32056102 aatagctttttaaattgagtgattaagtgattatacaa 32056065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1093046 - 1093102
Alignment:
Q  1 tgtgattctttcaatgaatagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||   |||||||||| ||||||||||||| ||| ||||||| ||||    
T  1093046 tgtgattctttcatgaaatagctttttaaattgactgatttagtcattataccaatt 1093102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 31244089 - 31244050
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  31244089 aatagcttttcaa-ttgattgattaagtgattatacaaatt 31244050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 32130795 - 32131057
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  32130795 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaagaaga 32130894  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    ||||| |||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  32130895 actagtgtctaga-aaaaactcaaacgggtactaaagaaagaaaatgatataacatatatattttttatttaagtggggggtgggtattagatttaattt 32130993  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||| ||| || |||| ||||||||||||| |||| ||||| |||||| ||||||||||||||    
T  32130994 ttcgtgagaagctcgtagcatttggaggcccagcctggttgaacaccttacacaccctcaaggc 32131057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 28463593 - 28463853
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| |||    
T  28463593 tgtgattttttcaatgaaatagcttttcaacttgattgattaagtgattatacaaattaggggtggtttgataagatccgatttatgtacaaaaaggaga 28463692  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||||||||||||   |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  28463693 actagagtctagaaaaaaactcaaacgtttactaaagaaagaaaaggatataacatatatattttttatttaagtggggggtgggtattagatttaattt 28463792  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||||||||| |||||||||| |||||||  |||| ||||||||||||| ||||    
T  28463793 ttcgttagaggcccgtagcatttggaggtccggcctgattgaacaccttgcacaccttcaa 28463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 53011771 - 53011510
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||    
T  53011771 tgtgattcttttaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaggaga 53011672  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaattt 197  Q
    | |||||| ||||   ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||    
T  53011671 attagagtttaga-aaaaactcaaacgtgtactaaagaaagaaaatgatataac--atatattttttatttaaatgggggatgggtattagatttaattt 53011575  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggctg 263  Q
    ||||||||||||||||| |||||||||| |||| || ||||| |||||||||||||||||||||||    
T  53011574 ttcgttagaggcccgtagcatttggagg-ccggtctggttgagcaccttgcacaccctcaaggctg 53011510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 19661438 - 19661177
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||    
T  19661438 tgtgtttctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaatgaga 19661339  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaattt 197  Q
    |||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||| |||||||||    
T  19661338 actagagtctaga-aaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaagtgggggatgggtattaaatttaattt 19661240  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||| ||| || |||||| |||||| |||| ||||| |||||||||||||||||||||    
T  19661239 ttcgttagagacccatagcatttgaaggccc-gcctggttgagcaccttgcacaccctcaaggc 19661177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 11681747 - 11682008
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaa-gaag 98  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||| | ||    
T  11681747 tgtgattctttcaatgaaataactttccaaattgactgattaagtgattataaaaattaggggtggtttgataggatccgatttatgtaaaaaaaaggag 11681846  T
Q  99 aactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaatt 196  Q
    ||||||||||||||   |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||  ||||||||||||||||||    
T  11681847 aactagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaagaatataatatatatattttttatttaagtggggggtgggtattagatttaatt 11681946  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||||| |||| |||||| ||||||||||| ||||| ||||||||||||||||||    
T  11681947 tttcgttagaggctcgtagcatttgaaggcccggcctggttgagcaccttgcacaccctcaa 11682008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 11690026 - 11690287
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaa-gaag 98  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||| | ||    
T  11690026 tgtgattctttcaatgaaataactttccaaattgactgattaagtgattataaaaattaggggtggtttgataggatccgatttatgtaaaaaaaaggag 11690125  T
Q  99 aactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaatt 196  Q
    ||||||||||||||   |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||  ||||||||||||||||||    
T  11690126 aactagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaagaatataatatatatattttttatttaagtggggggtgggtattagatttaatt 11690225  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||||| |||| |||||| ||||||||||| ||||| ||||||||||||||||||    
T  11690226 tttcgttagaggctcgtagcatttgaaggcccggcctggttgagcaccttgcacaccctcaa 11690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 21169088 - 21168853
Alignment:
Q  28 aaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgt 127  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||   ||||||||||||    
T  21169088 aaattgactcattaattgattatacaaattaggggtgatttgataggatccgatttatgtacaaaaaggagaactagagtctagaaaaaaactcaaacgt 21168989  T
Q  128 gtactaaagaaagaaaatgatataacatatatattttttatttaa--atggggtgggtattagatttaatttttcgttagaggcccgtaacatttggagg 225  Q
    |||| |||||||||||| | |||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||| |||||||||     
T  21168988 gtacaaaagaaagaaaaggttataacatatatattttttatttaagtgtggggtgggcattagatttaatttttcgttagaggcccgtatcatttggaga 21168889  T
Q  226 cccggcctagttgatcaccttgcacaccctcaaggc 261  Q
     ||||||| ||||| ||||||||| |||||||||||    
T  21168888 tccggcctggttgagcaccttgcataccctcaaggc 21168853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 41038309 - 41038045
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatac-aaaaagaag 98  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||     
T  41038309 tgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaattaggggtgatttgataggattcgatttatgtacaaaaaaaaaa 41038210  T
Q  99 aactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata-ttttttatttaaat--ggggtgggtattagatttaat 195  Q
    ||||||||||||||   |||||||||||||||||||||||  |||| ||||||| ||||||| ||||||||||||||  ||||||| |||||||||||||    
T  41038209 aactagagtctagaaaaaaactcaaacgtgtactaaagaataaaaaagatataatatatatatttttttatttaaatggggggtggatattagatttaat 41038110  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||| | ||||| |||||||||||||||||| ||||| || ||||||||||||||||||    
T  41038109 ttttcgttaga-gaccgtatcatttggaggcccggcctggttgagcatcttgcacaccctcaaggc 41038045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 44478098 - 44477835
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||  | |    
T  44478098 tgtgattctttcaatgaaatagctttccaaattgactgatttagtgattatacaaattatgggtggtttgataggatctgatttatgtacaaaaatgata 44477999  T
Q  100 actaga-gtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatt 196  Q
    |||||| || ||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||||| |||    
T  44477998 actagaagtttagaaaaaaactcaaacgtgtactaaagaaataaaatgatataacatatatattttttatttaaatgaggggtggatattagattt-att 44477900  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||| |||||| ||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  44477899 tttcgttagaggtccgtaatatttggaggcccgacctggttgaacaccttacacaccctcaaggc 44477835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 23426171 - 23426417
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| |||    
T  23426171 tgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattagaggtggtttgataggatccgatttatgtacaaaaaggaga 23426270  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    |||||||||||||   |||||||||||| ||||||||||||||||  ||||||||||||||| ||| | |   | |||||||||||||||||||||||||    
T  23426271 actagagtctagaaaaaaactcaaacgtatactaaagaaagaaaagtatataacatatatatatttaagt---agggggtgggtattagatttaattttt 23426367  T
Q  200 cgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgca 249  Q
    |||||||||||||||  |||| |||| || |||||||||| |||||||||    
T  23426368 cgttagaggcccgtagtatttcgaggtccagcctagttgagcaccttgca 23426417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 27632457 - 27632199
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||| |||    
T  27632457 tgtgattctttcaatgaagtagcttttcaaattgactaattaagtgattatacaaattaggggtggtttgataggatcaaatttatgtacaaaaaggaga 27632358  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaattt 197  Q
    |||||| ||||||   ||||||||||||||||| |||||||||||| |||||||  |||| ||||||||||||  ||||  ||||||||||  ||||| |    
T  27632357 actagaatctagaaaaaaactcaaacgtgtactgaagaaagaaaattatataac--atattttttttatttaacagggggatgggtattagtcttaatat 27632260  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||  ||  ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  27632259 tt--ttttaggcccgtagcatttggaggcccggcctagttgagcaccttgcactccctcaagg 27632199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 23256653 - 23256394
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||| |||| |||||||  |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  23256653 tgtgattctttcattgaaatagctttctaaattgactgattaagtggttatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 23256554  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata--ttttttatttaaat-ggggtgggtattagatttaatt 196  Q
    ||| ||||||| |   ||||||||| ||||||| ||||||||||| |||||||||||||||  |||||| ||||| | ||||||| ||||| ||||||||    
T  23256553 actggagtcta-aaaaaaactcaaatgtgtact-aagaaagaaaaggatataacatatatattttttttgtttaagtgggggtggatattatatttaatt 23256456  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    |||||||| || ||| |||||||||||||  ||||||  |||| ||||||||||||||||||    
T  23256455 tttcgttaaagacccataacatttggaggttcggcctgattgagcaccttgcacaccctcaa 23256394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 29221626 - 29221891
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||| ||||||||| |||  || ||||||||| | |||||||||||||||||||| | ||| |||||||||||| ||||||| ||||||||  |||    
T  29221626 tgtgattccttcaatgaaatagacttccaaattgaccgtttaagtgattatacaaattaagagtggtttgataggatcagatttatgtacaaaaacgaga 29221725  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata--ttttttatttaaat--ggggtgggtattagatttaat 195  Q
    | |||||||||||   ||||||||||||| | | ||||||||||| |||||||||||||||  |||||||||||| |  ||||||||||||| | |||||    
T  29221726 attagagtctagaaaaaaactcaaacgtgaaatgaagaaagaaaaggatataacatatatattttttttatttaagtggggggtgggtattaaacttaat 29221825  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||| ||| ||||||| |  ||||||||||||| | |  ||||| |||||||||| ||| ||||||    
T  29221826 tttttgtttgaggcccatggcatttggaggcccagtccggttgagcaccttgcactcccacaaggc 29221891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 16072636 - 16072498
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagattta 116  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||  |||||| ||||||||| ||| ||||||  ||||   |    
T  16072636 aatagtttttcaaattgactgattaaatgattatacaaattagggatggtttgataggatcaaatttatgtacaaaaaggagatctagagcttagaaaaa 16072537  T
Q  117 aactcaaacgtgtactaaagaaagaaaatgatataacat 155  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  16072536 aactcaaacgtgtaccgaagaaagaaaatgatataacat 16072498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 39372815 - 39372927
Alignment:
Q  149 ataacatatatattttttatttaaatgg--ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcacctt 246  Q
    |||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||| |||||||||  ||||||||| ||||||| ||||| ||||||    
T  39372815 ataacatatatattttttatttaagtggcgggtggatattagatttaatttttcgttaaaggcccgtagaatttggaggtccggcctggttgagcacctt 39372914  T
Q  247 gcacaccctcaag 259  Q
    |||||||||||||    
T  39372915 gcacaccctcaag 39372927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29579939 - 29579827
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| | ||||||||||||| ||||| |||||||||||| ||||||| ||||||||  |||    
T  29579939 tgtgattctttcattgaaatagcttttcaatttgactgattaattaattatacaaattatgggtggtttgataggatcagatttatgtacaaaaaataga 29579840  T
Q  100 actagagtctaga 112  Q
    |||||||||||||    
T  29579839 actagagtctaga 29579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 45172650 - 45172895
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| | | ||||||| | || |  | |||    
T  45172650 tgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaatta-gggtggtttgatagtaccagatttatgtccagattggaga 45172748  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  45172749 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtgggggtggatattagatttaatttt 45172834  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |  || ||||| | |||| |||| ||| ||||| |  |||| |||||||||| ||||||||||    
T  45172835 t--tttgaggcacataacttttgtaggtccggcttgattgagcaccttgcactccctcaaggc 45172895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21791552 - 21791712
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||   |||| |||||| | |||  |||||| | || |||| |||    
T  21791552 tgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatacacattgaaggtggtttgatggcatcaaatttatgttcagaaaggaga 21791651  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatat 161  Q
    |||||||||||||   |||||||||| |||||| | ||||||||| ||  ||||||||||||    
T  21791652 actagagtctaga-aaaaactcaaacatgtactgatgaaagaaaaagaagtaacatatatat 21791712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35653985 - 35654097
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||   |||| |||||||| |||  |||||| | || |||| |||    
T  35653985 tgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaattgatggtggtttgatagcatcatatttatgtccagaaagtaga 35654084  T
Q  100 actagagtctaga 112  Q
    |||||||||||||    
T  35654085 actagagtctaga 35654097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43154793 - 43154936
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||   |||| |||||||| |||  |||||| | ||||||| |||    
T  43154793 tgtgattcttttaatgaaataactttttaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccaaaaagtaga 43154892  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaa 144  Q
    |||||| ||||||   ||||||| |||||| ||||||||||||||    
T  43154893 actagaatctaga-aaaaactcatacgtgtcctaaagaaagaaaa 43154936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 34982283 - 34982038
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||| ||| || |||| ||| | | ||||||| | || | |||| |    
T  34982283 tgtgattctttcaacgaaatagtttttccaattgactgattaagtgattatacaaattggggatggtttgttagtaccagatttatgtccagatagaaaa 34982184  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||||       |||||       ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34982183 actaaagtctagaaa-aaactcaaacgtgta-------aagaag------taacatatatattttttatttaagtaggggtgggtattagatttaatttt 34982098  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |  |  ||||||| || | |||||||||||||| |  |||| ||| |||||| |||||||||    
T  34982097 t--tctgaggcccatagcttttggaggcccggcttgattgagcacattgcactccctcaagg 34982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 51066707 - 51066851
Alignment:
Q  116 aaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaatttttcgttagaggcccgt 213  Q
    |||||||||||||| || |||| ||||||  |  |||||||||| | ||||||||||||||||  ||| ||||||| ||||||||| ||| |||||||||    
T  51066707 aaactcaaacgtgtgctgaagagagaaaaaaaagtaacatatatttcttttatttaaatggggagtggatattagacttaattttttgtttgaggcccgt 51066806  T
Q  214 aacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||| |||| ||||||| || ||  ||||||||| |||||||    
T  51066807 aacatttagaggtccggcctggtagagaaccttgcactccctcaa 51066851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 22423741 - 22423600
Alignment:
Q  3 tgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaac 101  Q
    ||||||||||||| || ||| |||||||||||| |||||||||||| |||||||||   |||| |||||||| |||  |||||| | || |||| |||||    
T  22423741 tgattctttcaataaaatagtttttcaaattgattgattaagtgatcatacaaattgatggtggtttgatagcatcaaatttatgtccagaaagtagaac 22423642  T
Q  102 tagagtctagatttaaactcaaacgtgtactaaagaaagaaaa 144  Q
    |||||||||||   ||||||| |||||||| ||||||| ||||    
T  22423641 tagagtctaga-aaaaactcatacgtgtaccaaagaaaaaaaa 22423600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5545388 - 5545276
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||| | |||| |||||| | |||  |||||| | || | ||||||    
T  5545388 tgtgattcttttaatgaaatagctttccaaattgaccgattaagtgattatacaaattggtggtggtttgatggcatcaaatttatgtccagacagaaga 5545289  T
Q  100 actagagtctaga 112  Q
    | |||||||||||    
T  5545288 attagagtctaga 5545276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 24449168 - 24449040
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaatt--aggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatt 114  Q
    ||||| ||||||||||||| |||||||||||||||||||||      ||| |||||||| |||  |||||||| || |||| ||||||||||||||||      
T  24449168 aatagtttttcaaattgaccgattaagtgattatacaaattgatatagtggtttgatagcatcaaatttatatccagaaagtagaactagagtctaga-a 24449070  T
Q  115 taaactcaaacgtgtactaaagaaagaaaa 144  Q
     ||||||| ||||||||| |||||||||||    
T  24449069 aaaactcatacgtgtactgaagaaagaaaa 24449040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 29579766 - 29579655
Alignment:
Q  141 aaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttg 238  Q
    |||| |||||||||||||| |||||||||||| |  |||||| | |||||| ||||||||| ||| ||| |||||| |||||||||| |||||||  |||    
T  29579766 aaaaggatataacatatattttttttatttaagtggggggtgagcattagacttaattttttgtttgagacccgtagcatttggaggtccggcctgattg 29579667  T
Q  239 atcaccttgcac 250  Q
    | ||| ||||||    
T  29579666 agcactttgcac 29579655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 48512342 - 48512393
Alignment:
Q  116 aaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttta 167  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  48512342 aaactcaaacgtgtactaaagaaagaaaaagaaataacatatatttttttta 48512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 55134267 - 55134210
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  55134267 tgtgattctttctatgaaatagcttttcaaattgactgattaagtcattataccaatt 55134210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 26329065 - 26329233
Alignment:
Q  28 aaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgt 127  Q
    ||||||||||||| | |||||||| ||||| | |||| |||| ||| ||| ||||||| | ||||  | |||| || ||||||||   ||| ||||||||    
T  26329065 aaattgactgattgaatgattatataaattggaggtggtttggtagcatcagatttatgtccaaa--ggagaattacagtctagaaa-aaattcaaacgt 26329161  T
Q  128 gtactaaagaaagaaaatgatataacatatatattt-tttatttaaatggggtg-ggtattagatttaattt 197  Q
    |||| |||||||||||| ||  |||||||||| ||| ||||||||| ||||||| || |||||| |||||||    
T  26329162 gtaccaaagaaagaaaaagaagtaacatatatttttatttatttaagtggggtgtggcattagacttaattt 26329233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10575528 - 10575601
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    ||||||| |||||||||| || ||||  ||||||||||||||||||||||||||| ||  ||||| ||||||||    
T  10575528 tgtgattatttcaatgaaataactttctaaattgactgattaagtgattatacaagttgagggtggtttgatag 10575601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 12884142 - 12884404
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| | |    
T  12884142 tgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaaa 12884241  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaa--atggggtgggtattagatttaattt 197  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||| |||||||||||||||    
T  12884242 actagagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtaggggttggatattagatttaattt 12884341  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||||||||| ||||| ||| |||||||||| |||||||||  ||||| |||||||||||||    
T  12884342 ttcgttagaggtccgtagcatgtggaggcccgacctagttgagtaccttacacaccctcaagg 12884404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 51110106 - 51110369
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| | |    
T  51110106 tgtgattctttcaatgaaatagctttctaaattgactgattaagtgattatagaaattaggggtggtttgataggatccgatttatgtacaaaaaggata 51110205  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatata-ttttttatttaaatgg--ggtgggtattagatttaatt 196  Q
    |||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||| ||||||||||||||||    
T  51110206 actatagtctagaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttttatttaagtgggtggtaggtattagatttaatt 51110305  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||||||||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||    
T  51110306 tttcgttagaggcccgtagcatttggaggcccggcctggttgagcaccttacacaccctcaagg 51110369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 14084706 - 14084968
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| ||||||||| |||    
T  14084706 tgtgattctttcaatgaaatagctttctaaattgactgattaagtgattatacattttaggggtgatttgataggatcagatttatgtacaaaaaggaga 14084805  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg--gggtgggtattagatttaattt 197  Q
    |||||||||||||   ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  14084806 actagagtctaga-aaaaattcaaacctgtactgaagaaagaaaatgatataacatatatattttttatttaagtggagggtgggtattagatttaattt 14084904  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||| |||||||||||||||||||| |||| || ||||| |||||||||||||||||||||    
T  14084905 ttcgttaaaggcccgtaacatttggaggtccggtctggttgagcaccttgcacaccctcaaggc 14084968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 48722375 - 48722637
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||    
T  48722375 tgtgattatttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaatgaga 48722474  T
Q  100 actagagtctag--atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    | ||||||||||  |   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||| ||||| |||||||    
T  48722475 aatagagtctagaaaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaagtggggggtggatattaaatttaat 48722574  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||    
T  48722575 ttttcgttagaggcccgtagcatttggaggcccggcctggttgagcactttgcacaccctcaa 48722637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 50552554 - 50552299
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  50552554 tgtgattctttcaatgaaataacttttcaaattgaccgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 50552455  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatt-ttttatttaaat--ggggtgggtattagatttaatt 196  Q
    ||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||    
T  50552454 actagagtctacaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttttatttaagtggggggtgggtattagatttaatt 50552355  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacac 252  Q
    |||||||||||| || || ||||||||| || || || ||||| ||||||||||||    
T  50552354 tttcgttagaggtccatagcatttggagacctggtctggttgagcaccttgcacac 50552299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 33124635 - 33124900
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||| || |||||| |||    
T  33124635 tgtgattctttcaatgaaatagcttttcaaattgacttattaagtgattatacaaattagaggtggtttaataggatccgatttatgtagaaaaaggaga 33124734  T
Q  100 ac--tagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    ||  ||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||| ||||||||| |||||||    
T  33124735 actatagagtctaaaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaagttggggatgggtattaaatttaat 33124834  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    ||||||||||||||||||| | ||||||||||| ||||  |||| |||||||||||||||||||||    
T  33124835 ttttcgttagaggcccgtagcgtttggaggcccagcctgattgagcaccttgcacaccctcaaggc 33124900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 17487288 - 17487551
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || |||| |||||||| | |||||||||||||| |||||||||||| |||||||||||||||||||| || |||||| |||    
T  17487288 tgtgattctttcaatgaaataactttccaaattgatttattaagtgattatataaattaggggtggtttgataggatccgatttatgtaaaaaaaggaga 17487387  T
Q  100 actagagtctagatttaaactcaaacgtgtac--taaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaat 195  Q
    |||||||||||||   ||||||||| ||||||  |||||||||||||  |||||||||||||||||||||||||| |||||  |||||||||||||||||    
T  17487388 actagagtctagaaaaaaactcaaatgtgtacactaaagaaagaaaagaatataacatatatattttttatttaagtggggggtgggtattagatttaat 17487487  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaag 259  Q
    ||||||||||||||||||| |||||||||||||||| | |||||  ||||||||||||||||||    
T  17487488 ttttcgttagaggcccgtatcatttggaggcccggcttggttgaggaccttgcacaccctcaag 17487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 18127942 - 18128207
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  ||| ||||| |||    
T  18127942 tgtgattcttgcaatgaaatagcttttcaaattgactgattaagtgattatacaaattatgggtggtttgataggatccgatttacgtac-aaaaggaga 18128040  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattt--tttatttaaatgggg--tgggtattagatttaa 194  Q
    |||||| ||||| |   |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||  ||||||||| ||||||    
T  18128041 actagaatctagaaaaaaaactcaaacgtgtactaaagaaagaaaatgatataacatatattttttatttatttaagtgggggctgggtattaaatttaa 18128140  T
Q  195 tttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||| ||||| ||||| |||||||||||| ||||| |||||||||||||||||||||    
T  18128141 tttttcgttagaggtccgtagcatttagaggcccggcctggttgagcaccttgcacaccctcaaggc 18128207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 10109779 - 10109514
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||| |||    
T  10109779 tgtgattctttcaatgaaattgctttccaaattgactgattaagtgattatacaaattagtggtggtttgataggatccaatttatgtacaaaaaggaga 10109680  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacata-tatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    |||||||||||| |   ||||||||||||||| |||| |||||||||||||||||||| | | |||||||||||| |  ||||||| |||||||||||||    
T  10109679 actagagtctagaaaaaaaactcaaacgtgtaataaaaaaagaaaatgatataacatatttttttttttatttaagtggggggtggatattagatttaat 10109580  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||| ||| ||||||  ||||  |||| |||| ||||||| |||||||||||||||||||||    
T  10109579 ttttcgtttgagacccgtagtatttaaaggctcggcttagttgagcaccttgcacaccctcaaggc 10109514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 30899715 - 30899526
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  30899715 tgtgattctttcaatgaaatagctttccaaattgactaattaagtgattatacaaattaggggtgatttgataggatccgatttatgtacaaaaaggaga 30899616  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtatta 187  Q
    |||||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  30899615 actagagtctagaaaaaaaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttaagtgggggtgggtatta 30899526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 20905292 - 20905545
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||  || |||||||||||| |||||||||||||||||||||| || |||||||||||  ||||||| ||||||||| |||    
T  20905292 tgtgattctttcaatgaaatagacttccaaattgactgaataagtgattatacaaattagggctggtttgataggattagatttatgtacaaaaaggaga 20905391  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatata-tattttttatttaaat--ggggtgggtattagatttaat 195  Q
    |||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||| | |||||||||||| |  |||||| |||||||| |||||    
T  20905392 actagagtctagaaataaaactcaaacgtgtactaaagaaagaaaagaatataacatatatttttttttatttaagtcgggggtgagtattagacttaat 20905491  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgca 249  Q
    |||| ||| ||| ||| | |||||||||||||||||||  ||||||||||||||    
T  20905492 tttttgtttgagacccatgacatttggaggcccggcctgattgatcaccttgca 20905545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 6150780 - 6150503
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||| ||||||||| |||    
T  6150780 tgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattatataaattaggggtggtttgataggatctgatttatgtacaaaaaggaga 6150681  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatat---------------tttttatttaa--atggggtggg 182  Q
    |||||||||||||   |||||||||||| ||   |||||||||||  |||||||||||||||               | | |||||||  | ||||||||    
T  6150680 actagagtctagaaaaaaactcaaacgtatagcgaagaaagaaaagaatataacatatatatatatatatatatatatatatatttaagtagggggtggg 6150581  T
Q  183 tattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||  |||| ||||||||||||||||||||    
T  6150580 tattagatttaatttttcgttagaggcccgtagcatttggaagcccggcctgattgagcaccttgcacaccctcaagg 6150503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 80 - 261
Target Start/End: Complemental strand, 20470706 - 20470524
Alignment:
Q  80 atttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg- 178  Q
    |||||| ||||||||| | || |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||     
T  20470706 atttatgtacaaaaaggataattagagtctagaaa-aaactcaaacgtgtactaaagaaagaaaaggatataacatatatattttttatttatgtggggg 20470608  T
Q  179 -tgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
     |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  20470607 gtgggtattagatttaatttttcgttagaggcccgtagcatttgtaggtccggcctggttgagcaccttgcacaccctcaaggc 20470524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 52055611 - 52055347
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||| || |  ||||||| |||  ||||||| ||||||||| |||    
T  52055611 tgtgattctttcaatgaaatagctttccaaattgattgattaagtgattatataaattatggatagtttgatatgattagatttatgtacaaaaaggaga 52055512  T
Q  100 actagagtct-agatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattt-tttatttaaatggg--gtgggtattagatttaat 195  Q
    |||||||||| | |   |||||||||||| |||| |||||||||||||||||||||||||| ||| || |||||| ||||  |||||||||||| |||||    
T  52055511 actagagtctaaaaaaaaaactcaaacgtatactgaagaaagaaaatgatataacatatatttttattcatttaagtggggagtgggtattagacttaat 52055412  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||||  || ||| ||| || ||||||||||| |||||| ||||| |||||||||| ||| |||||    
T  52055411 tttttatttgagacccatagcatttggaggctcggcctggttgagcaccttgcactcccccaagg 52055347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29208103 - 29208341
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||  || || ||||||||||||| ||||||||||||||||||||| ||||||| |||  ||||||| ||||||||  |||    
T  29208103 tgtgattctttcaatgaaatagacttccagattgactgattaaatgattatacaaattaggggtggtttgatatgattagatttatgtacaaaaaagaga 29208202  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat-ggggtgggtattagatttaatttt 198  Q
    |||||||||||||   ||| ||||||||||||  ||||||||||| |||||||||||||| |||||||||||| | |||||| |||||||| ||||||||    
T  29208203 actagagtctagaaaaaaattcaaacgtgtaccgaagaaagaaaaggatataacatatat-ttttttatttaagtgggggtgagtattagacttaatttt 29208301  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttg 238  Q
    | ||| ||||| | ||  ||||||||| ||||||| ||||    
T  29208302 ttgtttgaggctcatataatttggaggtccggcctggttg 29208341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27703534 - 27703737
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||  |||||| | ||||||  |||    
T  27703534 tgtgattctttcgatgaaatagctttccaaattgactgattaagtgattatacaaattgggggtggtttgatagcatcaaatttatgttcaaaaaagaga 27703633  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttt---atttaaat--ggggtgggtattagatttaa 194  Q
    |||||||||||||   ||||||||||||||||||||||||||||| ||  |||||||||||||||||   |||||| |  ||||||||||||||| ||||    
T  27703634 actagagtctaga-aaaaactcaaacgtgtactaaagaaagaaaaagaagtaacatatatattttttttaatttaagtggggggtgggtattagacttaa 27703732  T
Q  195 ttttt 199  Q
    |||||    
T  27703733 ttttt 27703737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 25930663 - 25930448
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||  |||    
T  25930663 tgtgatcctttcaatgaaatagcttttcaagttgactgattaagtgattatacaaattaggggtagtttgataggatcagatttatgtacaaaaatgaga 25930564  T
Q  100 actagagtctaga-tttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg--gggtgggtattagatttaatt 196  Q
    |||||||||||||    ||||||||||||||||  || |||||||| ||||| ||| || | |||||||||||| ||  |||||||||||| | |||| |    
T  25930563 actagagtctagacaaaaaactcaaacgtgtaccgaaaaaagaaaaggatatcacacattttttttttatttaagtggagggtgggtattaaacttaaat 25930464  T
Q  197 tttcgttagaggcccg 212  Q
    ||| ||| ||||||||    
T  25930463 ttttgtttgaggcccg 25930448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 30004915 - 30005108
Alignment:
Q  4 gattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaact 102  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||||||| |      |||||||||||| ||||||| ||||||||| |||| |    
T  30004915 gattctttcaatgaaatagcttttcaaattaattgattaagtgattatacaaattgg------tttgataggatcggatttatgtacaaaaaggagaagt 30005008  T
Q  103 agagtctag--atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg--ggtgggtattagatttaatttt 198  Q
    |||||||||  |   ||||||||||||||||  || |||||||| ||||||||| |||| ||||||||||||||||  ||||||||||||| ||||||||    
T  30005009 agagtctagaaaaaaaaactcaaacgtgtaccgaaaaaagaaaaggatataacacatat-ttttttatttaaatgggaggtgggtattagacttaatttt 30005107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 6333521 - 6333782
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| ||| || || |||| ||| |||||||||||||||||| |||| ||||||  || |||||||| ||| ||||||| ||||  ||  |||    
T  6333521 tgtgattcttttaataaaataactttccaatttgactgattaagtgattttacagattagga-tggtttgatagtatcagatttatgtacaggaatgaga 6333619  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaattt 197  Q
    ||||||||||| |   ||||||||||||||||  |||||||||||  |  |||||||||| ||||||||||||||||||  ||  |||||||  ||||||    
T  6333620 actagagtctaaagaaaaactcaaacgtgtaccgaagaaagaaaaataagtaacatatattttttttatttaaatgggggatgaatattagacataattt 6333719  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    || ||| |||||  |||||||||||||| ||| |||  | || |||||||||| |||||||||    
T  6333720 tttgtttgaggcttgtaacatttggaggtccgccctgttagagcaccttgcactccctcaagg 6333782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 28189403 - 28189211
Alignment:
Q  53 aaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataa 152  Q
    ||||||| |||  |||||||||||| ||||||| ||||||||| ||||||| |||||| |   ||||||||||||||| | |||||||||||||||||||    
T  28189403 aaattagaggtagtttgataggatcagatttatgtacaaaaaggagaactaaagtctaaaaa-aaactcaaacgtgtattgaagaaagaaaatgatataa 28189305  T
Q  153 catatata-----ttttttatttaaat--ggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttga 239  Q
    ||||||||     |||||||||||| |  ||||||||||||||| || |||||| ||| ||| |||||| |||||| ||||  ||||| |||||    
T  28189304 catatatatattcttttttatttaagtggggggtgggtattagacttgattttttgtttgagacccgtagcatttgaaggcttggcctggttga 28189211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 50371193 - 50371081
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||  |||||||||||||| |||   ||||||| || |||| |||    
T  50371193 tgtgattctttcaatgaaacagtttttcaaattgactgattaagtgattatacaaattgagggtgatttgatagcatcaactttatatccagaaaggaga 50371094  T
Q  100 actagagtctaga 112  Q
    |||||||||||||    
T  50371093 actagagtctaga 50371081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 12971465 - 12971219
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||| ||||||| | || | || |||    
T  12971465 tgtgattctttcgatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgataatatcagatttatgtccagataggaga 12971366  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaattt 197  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  12971365 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtggggggtgggtattagagttaattt 12971280  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    ||  |  ||||||| |  |  ||||||||||||| |  |||| |||||||||| |||||||||    
T  12971279 tt--tctgaggcccattgctcttggaggcccggcttgattgagcaccttgcactccctcaagg 12971219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28885676 - 28885775
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||| ||||||| |||||||  ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||||| ||||    
T  28885676 tgtgattcttacaatgaaatagctttcaaaattgattgattaagtgattatacaaattatgggtggtttgataggatccgatttatgcacaaaaaaaaga 28885775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 5560542 - 5560399
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||| |||| ||| | | ||||||| | || |||  |||    
T  5560542 tgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaattgggggtggtttggtagcaccagatttatgtccagaaatgaga 5560443  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaa 144  Q
    |||| |||||| |   || |||||||||||||| |||||||||||    
T  5560442 actatagtcta-aaaaaatctcaaacgtgtactgaagaaagaaaa 5560399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 44836726 - 44836838
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||   |||| |||||||| |||  |||||| | || |||| |||    
T  44836726 tgtgattctttcagtgaaatagtttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgttcagaaagtaga 44836825  T
Q  100 actagagtctaga 112  Q
    |||||| ||||||    
T  44836826 actagaatctaga 44836838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 2021942 - 2022064
Alignment:
Q  137 aaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagt 236  Q
    |||||||| ||||||||  |||| ||||| ||||||||||||| ||||||||| ||||||||| ||| |||| | |||  ||||||| ||||||||| ||    
T  2021942 aaagaaaaggatataactcatatttttttaatttaaatggggtaggtattagacttaattttttgtttgaggtctgtagtatttggaagcccggcctggt 2022041  T
Q  237 tgatcaccttgcacaccctcaag 259  Q
    |||  ||||||||| ||| ||||    
T  2022042 tgagtaccttgcactcccccaag 2022064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37873767 - 37873898
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||||  || |||||||||| ||||||||||||| ||||||||||   |||| |||||||| |||  |||||| |  | |||| |||    
T  37873767 tgtgattctttcaatgaaacagtttttcaaattaactgattaagtgactatacaaattgatggtggtttgatagcatcaaatttatgtctagaaagtaga 37873866  T
Q  100 actagagtctagatttaaactcaaacgtgtac 131  Q
    |||||||||||||   ||||||| ||||||||    
T  37873867 actagagtctagaaaaaaactcatacgtgtac 37873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 13120872 - 13120929
Alignment:
Q  2 gtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatta 58  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  13120872 gtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatta 13120929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17674359 - 17674416
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  17674359 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 17674416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 66 - 2
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtg 64  Q
    |||||||||||||||||| |  |||| |||||||||||||||||||||||||||||||| |||||    
T  66 tgtgattctttcaatgaaatcactttccaaattgactgattaagtgattatacaaattaagggtg 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22386842 - 22386899
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  22386842 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattgttcaaatt 22386899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 42740166 - 42740057
Alignment:
Q  4 gattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaact 102  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||||   |||  |||||||| |||  | |||| | || |||| ||||||    
T  42740166 gattctttcaatgaaatagtttttcaaattgactaattaagttattatacaaattgatggttgtttgatagcatcaaacttatgtccagaaagtagaact 42740067  T
Q  103 agagtctaga 112  Q
    ||||||||||    
T  42740066 agagtctaga 42740057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 3907528 - 3907366
Alignment:
Q  3 tgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaac 101  Q
    |||||||||||||||| ||  |||||||||||| ||||||| |||||||||||||| || ||| |||||||  |||  |||||| | || |||||| ||     
T  3907528 tgattctttcaatgaaataatttttcaaattgattgattaaatgattatacaaatt-ggagtggtttgataccatcgtatttatgttcataaagaaaaaa 3907430  T
Q  102 tagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatttttt 166  Q
    || |||||| |   ||||| |||||||||||||| |||||||| ||  |||||||| | ||||||    
T  3907429 taaagtcta-aaaaaaacttaaacgtgtactaaaaaaagaaaaagaagtaacatatttttttttt 3907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 15441332 - 15441193
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagattta 116  Q
    |||||||||  ||||||| ||||||||||||||||||||||   |||| |||||||| ||   |||||| |  | |||| ||||||||||||||||   |    
T  15441332 aatagctttataaattgagtgattaagtgattatacaaattgtaggtggtttgatagcattatatttatgtctagaaaggagaactagagtctaga-aaa 15441234  T
Q  117 aactcaaacgtgtactaaagaaagaaaatgatataacatat 157  Q
    ||||||||||||||   ||||||||||| ||  ||||||||    
T  15441233 aactcaaacgtgtatcgaagaaagaaaaagaagtaacatat 15441193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 9777447 - 9777380
Alignment:
Q  25 ttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaa 92  Q
    |||||||||||||||| |||||||||| ||||| |||||| |||| ||| ||| ||||||||| ||||    
T  9777447 ttcaaattgactgattgagtgattatataaattgggggtggtttggtagcatcagatttatatccaaa 9777380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 1269610 - 1269385
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| |||||||||||||||||| |||         |||||||| |||||| ||| |||| ||| ||||||| |  | |||| |||    
T  1269610 tgtgattcttttaatgaaatagcttttcaaattgactaattt--------tacaaattgggggtggtttcatagcatcagatttatgtctagaaaggaga 1269519  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatat-tttttatttaaat--ggggtgggtattagatttaatt 196  Q
    | |||||||||||   ||||||||||||||||  || |||||||| || | ||||||||||| ||||||||||| |  || |||| ||||||| ||||||    
T  1269518 attagagtctagaaa-aaactcaaacgtgtacagaaaaaagaaaaagaaaaaacatatatatatttttatttaagtgaggtgtggatattagacttaatt 1269420  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggc 231  Q
     ||  || ||||||| |||| ||| || |||||||    
T  1269419 gtttttttgaggcccataacttttagaagcccggc 1269385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 32810373 - 32810415
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattag 59  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  32810373 aatagcttttcaaattgattgattaagtgattattcaaattag 32810415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24556865 - 24556808
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||||||| |||||| ||| |||||||||||||| ||||||||||||| ||||||    
T  24556865 tgtgattctttaaatgaaatagtttttcaaattgacttattaagtgattattcaaatt 24556808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 26486407 - 26486513
Alignment:
Q  37 gattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaag 136  Q
    |||||||||||||||||||||   | || |||||||| |||  |||||| | || |||| ||||||||||| ||||   ||||||| |||||||||||||    
T  26486407 gattaagtgattatacaaattgatgatggtttgatagcatcaaatttatttccagaaagtagaactagagtttaga-aaaaactcatacgtgtactaaag 26486505  T
Q  137 aaagaaaa 144  Q
    ||| ||||    
T  26486506 aaaaaaaa 26486513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 28886140 - 28886205
Alignment:
Q  157 tatattttttatttaaatgg-ggtgggtattagatttaatttttcgttagaggcccgtaacatttg 221  Q
    |||||||||||||| | ||  ||||| |||||||||||||| ||||||| |||| |||||||||||    
T  28886140 tatattttttatttgagtgaaggtggatattagatttaattcttcgttaaaggcacgtaacatttg 28886205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 16769 - 16501
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  16769 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 16670  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaa-gaaagaaa---atgatata-acatatatattttttatttaaat--ggggtgggtattagattt 192  Q
    |||||||||||||   |||||||||||||||||||| || | |||   || ||||| | |||||||| |||||||||| |  ||||||||||||||||||    
T  16669 actagagtctagaaaaaaactcaaacgtgtactaaaggatataaagatataatatatatatatatatcttttatttaagtggggggtgggtattagattt 16570  T
Q  193 aatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||||||    
T  16569 aatttttcgttagaggcccgtagcatttggaggcccggtctggttgagcaccttgcacaccctcaaggc 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 13474689 - 13474427
Alignment:
Q  1 tgtgattctttcaatgaat-agcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||    
T  13474689 tgtgattctttcaatgaaacaacttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaagaga 13474590  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatt----ttttatttaaatggggtgggtattagatttaat 195  Q
    |||||||| ||||   |||||||||||||||||||||||| |||||||||||| |||||||||    |||||||||| ||||||| ||||||||||||||    
T  13474589 actagagtttagaaaaaaactcaaacgtgtactaaagaaaaaaaatgatataatatatatattttttttttatttaagtggggtgagtattagatttaat 13474490  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||| |||||| |||||||||||| ||| |||| ||| | ||||||||||||||||||    
T  13474489 ttttcgttaaaggcccataacatttggagacccagcctggttaagcaccttgcacaccctcaa 13474427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 13423923 - 13423657
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||  |||    
T  13423923 tgtgattctttcaatgaaatagctttctaaattgattgattaagtgattatacaaattaggaatggtttgataggatccgatttatgtacaaaaaagaga 13423824  T
Q  100 actagagtctagatttaaa---ctcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgggg--tgggtattagatttaa 194  Q
    ||||||||||| |   |||   |||| |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||   | ||||||||||||||    
T  13423823 actagagtctaaaaaaaaaaaactcatacgtgtgctaaagaaagaaaaggatataacatatatattttttatttaagtgggagataggtattagatttaa 13423724  T
Q  195 tttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  13423723 tttttcgttagaggcccgtaacatttggaggccccgcctggttgagcaccttgcacaccctcaaggc 13423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 26377779 - 26378042
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||    
T  26377779 tgtgattctttcaatgaaatagcttctcacattgactgaataagtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaggaga 26377878  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat---ggggtgggtattagatttaat 195  Q
    |||||||||||| |   |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |   ||||||  |||||||||||||    
T  26377879 actagagtctagaaaaaaaactcaaacgtgtactaaagaaagaaaaaaatataacatatatattttttatttaagtgggggggtgattattagatttaat 26377978  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaag 259  Q
    |||||||||||| ||||||  ||||| ||||||| ||| ||||| |||||||||||||||||||    
T  26377979 ttttcgttagagacccgtagaatttgaaggcccgacctggttgagcaccttgcacaccctcaag 26378042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13656269 - 13656033
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgat---aggatccgatttatatacaaaaaga 96  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| || |||  |   |||||||||||||| |||||||||     
T  13656269 tgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatacaaattagggatggtttttttttaggatccgatttatgtacaaaaagg 13656170  T
Q  97 agaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg-ggtgggtattagatttaat 195  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  13656169 agaactagagtctagaaa-aaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaagtggaggtggttattagatttaat 13656071  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcct 233  Q
    ||||||||||||||||| |  |||||||||||| ||||    
T  13656070 ttttcgttagaggcccgaagtatttggaggcccagcct 13656033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 36718572 - 36718832
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||||| || || |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||    
T  36718572 tgtgattctttcaataaaataactttacaaattgactgattaaatgattatacaaattaggggtggtttgataggatccgattcatgtacaaaaaggaga 36718671  T
Q  100 actagagtctag-atttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggg--gtgggtattagatttaatt 196  Q
    |||||||||||| |   ||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||| ||||  | | ||||||||||| |||    
T  36718672 actagagtctagaaaaaaaactcacacgtgtactaaaaaaagaaaagaatataacatatatattttttatttaagtggggagagagtattagattt-att 36718770  T
Q  197 tttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaa 258  Q
    ||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| ||||||    
T  36718771 tttcgttagagacccgtagcattcggaggcccggcctagttgagcaccttgcacatcctcaa 36718832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 12661368 - 12661102
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| || |    
T  12661368 tgtgattctttcaatgaaatagctttccaaattgactggttaagtgattatacaaattagaggtggtttgatagaatccgatttatatacaaaaaaaaaa 12661269  T
Q  100 a------ctagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg--gggtgggtattagatt 191  Q
    |      ||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||  |||| | |||||||||    
T  12661268 aaaaaaactagagtctagaaa-aaactcaaacgtgtactaaagaaagaaaatgaaataacatatatattttttatttaagtggagggtagatattagatt 12661170  T
Q  192 taatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaag 259  Q
    |||||||| | | |||| ||||| ||||||||||||||  || ||||| |||||||||||||||||||    
T  12661169 taattttttgattgaggtccgtagcatttggaggcccgatctggttgagcaccttgcacaccctcaag 12661102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 51 - 258
Target Start/End: Complemental strand, 8398989 - 8398778
Alignment:
Q  51 acaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatat 150  Q
    |||||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||| |   ||||||||||||||||||||||||||||| |||||    
T  8398989 acaaattaggggtggtttgataggatccgatttatgtacaaaaatgagaactagagtctaaaaaaaaactcaaacgtgtactaaagaaagaaaaggatat 8398890  T
Q  151 aacatat--atattttttatttaaat--ggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcacctt 246  Q
    |||||||  ||||||||||||||| |  |||||| |||||||||||||||||||||||| |||||||| |||||||||| |||||||  |||| ||||||    
T  8398889 aacatatatatattttttatttaagtggggggtgagtattagatttaatttttcgttaggggcccgtagcatttggaggtccggcctgattgagcacctt 8398790  T
Q  247 gcacaccctcaa 258  Q
    ||||||||||||    
T  8398789 gcacaccctcaa 8398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 19099319 - 19099582
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||||||| |||    
T  19099319 tgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaattagggatggtttgataggatcagatttatgtacaaaaaggaga 19099418  T
Q  100 actagagtct--agatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaat 195  Q
    |||| |||||  | |   |||||||||| ||| |  || || ||||| ||||||||| || | ||||||||||||||  ||||||||||||||| |||||    
T  19099419 actatagtctaaaaaaaaaaactcaaacatgtgccgaaaaaggaaaaggatataacacat-ttttttttatttaaatggggggtgggtattagacttaat 19099517  T
Q  196 ttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaagg 260  Q
    |||| ||| ||||||||||  ||||||||||||| ||| ||||| |||||||||| ||| |||||    
T  19099518 tttttgtttgaggcccgtagtatttggaggcccgacctggttgagcaccttgcactcccacaagg 19099582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 212
Target Start/End: Complemental strand, 26312029 - 26311851
Alignment:
Q  36 tgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctag-atttaaactcaaacgtgtactaa 134  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| ||||| |   ||||||||||| |||||||    
T  26312029 tgattaagtgattatacaaattatgggtggtttgataggatccgatttatgtacaaaaagaagaactagaatctagaaaaaaaactcaaacgagtactaa 26311930  T
Q  135 agaaagaaaatgatataacatatatattttttatttaaat--ggggtgggtattagatttaatttttcgttagaggcccg 212  Q
    ||  | | || ||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||||    
T  26311929 ag-gatataaagatataacatatatattttttatttaagttgggggtaggtattagatttaatttttcgttagaggcccg 26311851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 43511677 - 43511431
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | | ||||||| | || | || |||    
T  43511677 tgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgtccagataggaga 43511578  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg-ggtgggtattagatttaatttt 198  Q
    |||| ||||||||   |||||||||||||   |||||||           ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43511577 actaaagtctaga-aaaaactcaaacgtg---taaagaa----------gtaacatatatattttttatttaagtggaggtgggtattagatttaatttt 43511492  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
    |  |  ||||||| || | |||||||| ||||| |  |||| |||||||||| ||||||||||    
T  43511491 t--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 43511431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 138203 - 138091
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||   |||| |||||||| |||  |||||| | | ||||| |||    
T  138203 tgtgattatttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccgaaaagtaga 138104  T
Q  100 actagagtctaga 112  Q
    |||||||||||||    
T  138103 actagagtctaga 138091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 27351404 - 27351179
Alignment:
Q  5 attctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaacta 103  Q
    |||||||||||||| || |||| ||||||||||||||||||| ||||||||||| | |||| |||||||| | |  |||||| | || |||| |||||||    
T  27351404 attctttcaatgaaataactttccaaattgactgattaagtggttatacaaattggaggtggtttgatagcaccaaatttatgttcagaaaggagaacta 27351305  T
Q  104 gagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatatt-ttttatttaa--atggggtgggtattaga-tttaattttt 199  Q
    |||||||||   || ||||||||| |||| ||||||||||| ||  |||||||||| || ||||||| ||  | |||||| |||||||| || ||||| |    
T  27351304 gagtctaga-aaaatctcaaacgtatactgaagaaagaaaaggaagtaacatatattttattttattcaagtagggggtgagtattagacttaaatttat 27351206  T
Q  200 cgttagaggcccgtaacatttggaggc 226  Q
      || ||||||| ||||||||||||||    
T  27351205 tttttgaggcccataacatttggaggc 27351179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29156249 - 29156120
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| | || | || | |    
T  29156249 tgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaattaggggtggtttgatagtaccagatttatgttcagataggata 29156150  T
Q  100 actagagtctagatttaaactcaaacgtgta 130  Q
    |||| ||||||||   |||||||||||||||    
T  29156149 actatagtctaga-aaaaactcaaacgtgta 29156120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 42291886 - 42292134
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| | |  |||||| | || | || |||    
T  42291886 tgtgattctttcaatgaaatagattttcaaattgactgattaagtgattatacaaattggtggtgatttgatagtaccaaatttatgtccagataggaga 42291985  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggg-gtgggtattagatttaatttt 198  Q
    |||| ||| ||||   ||| |||||||||||       |||||       ||||||||||||||||||||||| |||| ||| |||||||| ||||||||    
T  42291986 actaaagtttagaaa-aaagtcaaacgtgta-------aagaag------taacatatatattttttatttaagtgggcgtgagtattagagttaatttt 42292071  T
Q  199 tcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggctga 264  Q
    |  |  ||||||  || | ||||||||||||| ||| |||| |||||||||| |||||||||||||    
T  42292072 t--tctgaggcctatagcttttggaggcccgg-ctaattgagcaccttgcactccctcaaggctga 42292134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17513941 - 17514053
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| |||||| |||| ||| | | ||||||||| || | || |||    
T  17513941 tgtgattctttcagtgaaataacttttcaaattgactgattaagtgattatacaaattgggggtggtttgttagtaccagatttatatccagataggaga 17514040  T
Q  100 actagagtctaga 112  Q
    |||| ||||||||    
T  17514041 actaaagtctaga 17514053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 10591278 - 10591407
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||| |||||||| | |  |||||| | || | || |||    
T  10591278 tgtgattctttcaatgaaataacttttcaaattaactgattaagtgattatacaaattgggggtggtttgatagtaccatatttatgttcagataggaga 10591377  T
Q  100 actagagtctagatttaaactcaaacgtgta 130  Q
    |||| ||||||||   |||||||||||||||    
T  10591378 actaaagtctaga-aaaaactcaaacgtgta 10591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 4734587 - 4734832
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||||||| ||| |||||||||||| |||| ||| ||||||||||||| | |||| |||||||| | | ||||||| | || | || |||    
T  4734587 tgtgattctttcaatgaaatagattttcaaattgagtgatcaagggattatacaaattggtggtggtttgatagtaccagatttatgtccagataggaga 4734686  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatggggtgggtattagatttaattttt 199  Q
    |||| ||||||||   |||||||||| ||||       |||||       ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  4734687 actaaagtctagaaa-aaactcaaacatgta-------aagaag------taacatatatattttttatttaagtggggtgggtattagagttaattttt 4734772  T
Q  200 cgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
      |  ||||||| || | |||||||||||||| |  |||| ||  |||||| ||||||||||    
T  4734773 --tatgaggcccatagcttttggaggcccggcttgattgagcattttgcactccctcaaggc 4734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20976044 - 20975971
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | |||| ||||||||    
T  20976044 tgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattatacaaattggtggtggtttgatag 20975971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 931422 - 931327
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctaga 112  Q
    |||||||||  |||||||||||||||||||||||||||||| || ||||||| |||| |||  ||||||||| | |||  ||||||| ||||||||    
T  931422 aatagctttctaaattgactgattaagtgattatacaaattgggtgtgatttaatagcatcaaatttatatatagaaaagagaactatagtctaga 931327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 20975906 - 20975800
Alignment:
Q  150 taacatatatattttttatttaaatgg-ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgc 248  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    ||||||| || | |||||||||||||| |  |||| ||||||||    
T  20975906 taacatatatattttttatttaagtggaggtgggtattagagttaatttttc---tgaggcccatagcttttggaggcccggcttgattgagcaccttgc 20975810  T
Q  249 acaccctcaa 258  Q
    || |||||||    
T  20975809 actccctcaa 20975800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18873516 - 18873458
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatta 58  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  18873516 tgtgattctttcaatgaaatagcttttcaaattggctgattaagtggttatacaaatta 18873458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 8379562 - 8379691
Alignment:
Q  36 tgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaa 135  Q
    ||||||||| |||||||||||||||||||||||||||  |||  |||||| | || |||  ||||  ||||||||||   ||||||||| ||||||  ||    
T  8379562 tgattaagtaattatacaaattaggggtgatttgataacatcatatttatgtccataaatgagaatgagagtctaga-aaaaactcaaatgtgtaccgaa 8379660  T
Q  136 gaaagaaaatgatataacatatatatttttt 166  Q
    ||||||||| || ||||||||| | ||||||    
T  8379661 gaaagaaaaagaaataacatatttttttttt 8379691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10033606 - 10033493
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactg-attaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaag 98  Q
    ||||||||||||||| || ||||||||||||||||||  | | ||||||||||||||||   || | |||||||| |||  |||||| |||| |||| ||    
T  10033606 tgtgattctttcaataaaatagcttttcaaattgactttaatcagtgattatacaaattgatgggggtttgatagcatcaaatttatgtacagaaagtag 10033507  T
Q  99 aactagagtctaga 112  Q
    ||||||||||||||    
T  10033506 aactagagtctaga 10033493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 40956372 - 40956217
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||||||| |||||| ||| |||||||||| | |||||||||||||||||||||| | |    |||||| | ||| ||||||| | || |||| |||    
T  40956372 tgtgattcttttaatgaaatagtttttcaaattaaatgattaagtgattatacaaattggagaatgtttgattgcatcagatttatgtccacaaaggaga 40956273  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatat 161  Q
    |||||||||||||   |||||||||||||     ||||||||||| ||  ||||||||||||    
T  40956272 actagagtctaga-aaaaactcaaacgtg-----aagaaagaaaaagaagtaacatatatat 40956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 10591418 - 10591521
Alignment:
Q  156 atatattttttatttaaat-ggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccc 254  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||  || | |||| || | |||||||||||||| |  |||| |||||||||| |||    
T  10591418 atatattttttatttaaatgggggtgggtattagagttgatttttc--ta-aagcccatagcttttggaggcccggcttgattgagcaccttgcactccc 10591514  T
Q  255 tcaaggc 261  Q
    |||||||    
T  10591515 tcaaggc 10591521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3349734 - 3349784
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattat 50  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  3349734 tgtgattctttctatgaaatagcttttcaaattgactgattaagtcattat 3349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5829442 - 5829387
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaatt 57  Q
    ||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||    
T  5829442 tgtgattcttttaatgaaatagcttt--aaattgactgattaagtgattatacaaatt 5829387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 7390406 - 7390460
Alignment:
Q  2 gtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaa 55  Q
    ||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||    
T  7390406 gtgattctttcgatgaaataactttttaaattgactgattaagtgattatacaaa 7390460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 17514092 - 17514138
Alignment:
Q  154 atatatattttttatttaaatgggg-tgggtattagatttaattttt 199  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  17514092 atatatattttttatttaagtgggggtgggtattagatttaattttt 17514138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17325904 - 17325847
Alignment:
Q  1 tgtgattctttcaatgaa-tagctttt-caaattgactgattaagtgattatacaaat 56  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||    
T  17325904 tgtgattctttcaatgaaatagttttttcaaattgactgattaagtgattattcaaat 17325847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 23069262 - 23069099
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagattta 116  Q
    ||||||||| ||||| || |||||||| ||||||||||||| |||||| |||| ||| |||  |||||| | || |||| |||| |||||| || |   |    
T  23069262 aatagctttccaaatcgaatgattaagggattatacaaattgggggtggtttgctagcatcatatttatgttcagaaaggagaattagagtata-aaaaa 23069164  T
Q  117 aactcaaacgtgtactaaagaaagaaaatgatataacatatatattt--tttatttaaatggggt 179  Q
    ||| ||||||||||   ||||||||||| ||  |||||||||| |||  ||||||||| ||||||    
T  23069163 aacacaaacgtgtaacgaagaaagaaaaagaagtaacatatatcttttatttatttaagtggggt 23069099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 33281730 - 33281677
Alignment:
Q  4 gattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaat 56  Q
    ||||||||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  33281730 gattctttcaatgaaataactttttaaattgactaattaagtgattatacaaat 33281677  T

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Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 37029054 - 37029108
Alignment:
Q  17 aatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||||||| ||||||| ||||||||||||||||||||||  || |||||||||||    
T  37029054 aatagctttttaaattgattgattaagtgattatacaaatt--ggatgatttgatag 37029108  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 29156113 - 29156062
Alignment:
Q  150 taacatatatatttttt-atttaaatgg-ggtgggtattagatttaattttt 199  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  29156113 taacatatatatttttttatttaaatagaggtgggtattagatttaattttt 29156062  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 40778785 - 40778675
Alignment:
Q  122 aaacgtgtactaaagaaagaaaatgatataacatatatatt-ttttatttaaat--ggggtgggtattagatttaatttttcgttagaggcccgtaacat 218  Q
    ||||||| ||| ||||||||||| ||  |||||||||| || |||||||||| |  |||||| |||||||| ||||| ||| ||| ||||| | |||| |    
T  40778785 aaacgtgcactcaagaaagaaaaggaagtaacatatattttattttatttaagtagggggtgagtattagacttaatattttgtttgaggctcataactt 40778686  T
Q  219 ttggaggcccg 229  Q
    |||||||||||    
T  40778685 ttggaggcccg 40778675  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 3349869 - 3349917
Alignment:
Q  150 taacatatatattttttatttaaatggggtgggtattagatttaatttt 198  Q
    |||||||| |||||||||||||| || ||||||||||| | ||||||||    
T  3349869 taacatatgtattttttatttaagtgaggtgggtattacaattaatttt 3349917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 40779235 - 40779139
Alignment:
Q  16 gaatagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctaga 112  Q
    |||||| |||||||||||||| |||||  ||||||||||||| ||| |  |||||||  |||  |||||| | || |||| ||||||||| ||||||    
T  40779235 gaatagtttttcaaattgacttattaaacgattatacaaattggggatagtttgataacatcaaatttatgttcagaaaggagaactagactctaga 40779139  T

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Target: scaffold0181 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17137 - 17307
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  17137 tgtgattctttcaacgaaatagctttccaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaatgaga 17236  T
Q  100 actagagtctagatttaa-actcaaacgtgtactaaagaaagaaaatgatataacatatatattttttattt 170  Q
    |||||||||||||   || | |||||||||||||||||  | | || | |||||||||||||||||||||||    
T  17237 actagagtctagaaaaaacattcaaacgtgtactaaag-gatataaagttataacatatatattttttattt 17307  T

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Target: scaffold0181; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 18128 - 18231
Alignment:
Q  162 tttttatttaaatgggg--tgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaag 259  Q
    |||||||||||||||||  || ||||||||||||||||||||||| |||||| |||||||||||||||||||||  |||| |||||| ||||||||||||    
T  18128 tttttatttaaatggggggtgagtattagatttaatttttcgttaaaggcccataacatttggaggcccggcctgattgaacacctttcacaccctcaag 18227  T
Q  260 gctg 263  Q
    ||||    
T  18228 gctg 18231  T

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Target: scaffold0035 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 78 - 261
Target Start/End: Original strand, 22846 - 23032
Alignment:
Q  78 cgatttatatacaaaaagaagaactagagtctagatttaaa-ctcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatgg 176  Q
    |||||||| ||||||||| |||| ||||||||| |   ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  22846 cgatttatgtacaaaaaggagaattagagtctacaaaaaaaactcaaacgtgtactaaagaaataaaaggatataacatatatattttttatttaagtgg 22945  T
Q  177 --ggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcacaccctcaaggc 261  Q
      ||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||| |||||| |||||||| |||||    
T  22946 agggtggatattagatttaatttttcgttagagacccgtatcatttggaggtccggcctggttgagcaccttacacaccctgaaggc 23032  T

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Target: scaffold0100 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 46178 - 46429
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaaga 99  Q
    ||||||| |||||||||| |||  || |||||||||||||||||||||||| ||||||| ||||| |||||||||||| ||| ||| || |||||  |||    
T  46178 tgtgattatttcaatgaaatagacttccaaattgactgattaagtgattatccaaattatgggtggtttgataggatcagatatatgtataaaaatgaga 46277  T
Q  100 actagagtctagatttaaactcaaacgtgtactaaagaaagaaaatgatataacatatatattttttatttaaatg-gggtgggtattagatttaa-ttt 197  Q
    |||||||||||||   ||| ||||| ||||||  |||||| ||||||||||||||| | | |||||||||||| || | |||||||||||| |||| |||    
T  46278 actagagtctagaaaaaaattcaaatgtgtaccgaagaaataaaatgatataacat-ttttttttttatttaagtgtgtgtgggtattagacttaatttt 46376  T
Q  198 ttcgttagaggcccgtaacatttggaggcccggcctagttgatcaccttgcac 250  Q
    || ||| ||||||| |  |||||| ||| ||||||| ||||| ||||||||||    
T  46377 tttgtttgaggcccatggcatttgaaggtccggcctggttgagcaccttgcac 46429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 1088 - 979
Alignment:
Q  44 tgattatacaaattaggggtgatttgataggatccgatttatatacaaaaagaagaactagagtctagatttaaactcaaacgtgtactaaagaaagaaa 143  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||   |||||||||| |||| |||||||| |||    
T  1088 tgattatacaaattaggggtggtttgataggatccgatttatgcacaaaaaggagaactagagtctagaaaaaaactcaaacatgtaataaagaaataaa 989  T
Q  144 atgatataac 153  Q
    | ||||||||    
T  988 aggatataac 979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8400 - 8473
Alignment:
Q  1 tgtgattctttcaatgaa-tagcttttcaaattgactgattaagtgattatacaaattaggggtgatttgatag 73  Q
    |||||||||||||||||| ||| |||  ||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  8400 tgtgattctttcaatgaaatagttttcgaaattgactgattaattgattatacaaattatgggtggtttgatag 8473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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