View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6690_low_35 (Length: 269)
Name: NF6690_low_35
Description: NF6690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6690_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 35722142 - 35721906
Alignment:
| Q |
19 |
agtactagtaaacatgccattaacattaacattaccattaccattaccaataccaaaatctttgttttctgataagttattcatcatattctgttgtaga |
118 |
Q |
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| T |
35722142 |
agtactagtaaacatgccattaacattaacattaccattaccattaccaataccaaaatctttgttttctgataagttattcatcatattctgttgtaga |
35722043 |
T |
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| Q |
119 |
agcaaagatggtggatgaattagagcttgatatagagatgaaggaatgcttttgtgatcaccaacttgaagaggagtttgaattgccatgtggctattca |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35722042 |
agcaaagatggtggatgaattagagcttgatatagagatgaaggaatgcttttgtgatcaccaacttgaagaggagtttgaattgccatgttgctattca |
35721943 |
T |
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| Q |
219 |
tatttgtaatagaggtggtgcaagtagtactagtagt |
255 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
35721942 |
tatttgtaatagaggtggtgcaagtagtactagtagt |
35721906 |
T |
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