View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6692_high_19 (Length: 236)
Name: NF6692_high_19
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6692_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 2466968 - 2467199
Alignment:
| Q |
1 |
atctccgaggaagttgttgtaaccaagccatgttgtggaaccaatgcaaaagccaccaccatggaaataaactaagagaggtaggagttttttggttgga |
100 |
Q |
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| T |
2466968 |
atctccgaggaagttgttgtaaccaagccatgttgtggaaccaatgcaaaagccaccaccatggaaataaactaagagaggtaggagttttttggttgga |
2467067 |
T |
|
| Q |
101 |
ttgtttggaatgaagattcttcctgtgatgggttttgtagggtcaatgattacgtctttggatttgtatttgttggatgaatctaatgagggtggtgcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2467068 |
ttgtttggaatgaagattcttcctgtgatgggttttgtagggtcaatgattatgtctttggatttgtatttgttggatgaatctaatgagggtggtgcta |
2467167 |
T |
|
| Q |
201 |
tttctgggttgaaacgtctcaccgttccatct |
232 |
Q |
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||||||||||||||||| |||||||||||||| |
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| T |
2467168 |
tttctgggttgaaacgtttcaccgttccatct |
2467199 |
T |
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