View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6692_high_24 (Length: 214)

Name: NF6692_high_24
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6692_high_24
NF6692_high_24
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-214)||(1659-1872)
scaffold0034 (1-214)||(11613-11826)
scaffold0034 (1-103)||(70867-70969)
[»] chr3 (34 HSPs)
chr3 (1-214)||(12357459-12357672)
chr3 (1-214)||(18131279-18131492)
chr3 (1-214)||(16831460-16831673)
chr3 (1-214)||(35983165-35983378)
chr3 (1-213)||(17494631-17494847)
chr3 (1-214)||(14290464-14290677)
chr3 (1-214)||(16384304-16384517)
chr3 (1-214)||(11958113-11958326)
chr3 (1-214)||(12181328-12181541)
chr3 (1-214)||(16825211-16825424)
chr3 (9-214)||(12857436-12857641)
chr3 (1-214)||(28757303-28757516)
chr3 (1-214)||(47126928-47127141)
chr3 (1-212)||(31692117-31692328)
chr3 (1-214)||(24190288-24190500)
chr3 (1-214)||(31941887-31942100)
chr3 (2-214)||(17189358-17189570)
chr3 (1-214)||(10408952-10409165)
chr3 (1-196)||(8744322-8744517)
chr3 (1-196)||(13945026-13945221)
chr3 (3-208)||(16326641-16326846)
chr3 (3-103)||(10416979-10417079)
chr3 (9-107)||(2245612-2245710)
chr3 (1-103)||(13317501-13317603)
chr3 (1-198)||(12508497-12508694)
chr3 (34-97)||(16695255-16695318)
chr3 (57-196)||(19727752-19727890)
chr3 (53-160)||(10008625-10008732)
chr3 (53-160)||(10909235-10909342)
chr3 (3-88)||(2036846-2036931)
chr3 (3-88)||(2040587-2040672)
chr3 (3-88)||(14039856-14039941)
chr3 (34-95)||(14873561-14873622)
chr3 (40-160)||(11861381-11861501)
[»] scaffold1530 (1 HSPs)
scaffold1530 (1-214)||(888-1101)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-214)||(5437-5650)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-214)||(39042-39253)
scaffold0010 (3-103)||(180548-180648)
scaffold0010 (39-132)||(5381-5474)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-214)||(3015-3222)
[»] chr7 (27 HSPs)
chr7 (1-214)||(13676796-13677003)
chr7 (1-214)||(16947163-16947376)
chr7 (12-214)||(19150356-19150558)
chr7 (12-214)||(20749755-20749957)
chr7 (1-214)||(13024689-13024902)
chr7 (1-214)||(14260937-14261150)
chr7 (1-214)||(11385120-11385333)
chr7 (1-210)||(12459977-12460186)
chr7 (1-213)||(12798195-12798407)
chr7 (1-214)||(14145006-14145219)
chr7 (1-196)||(18050644-18050839)
chr7 (1-214)||(26091489-26091702)
chr7 (1-214)||(26115281-26115494)
chr7 (84-214)||(15099377-15099507)
chr7 (1-214)||(14283065-14283278)
chr7 (1-214)||(40924508-40924721)
chr7 (1-214)||(49155646-49155859)
chr7 (1-200)||(13004824-13005023)
chr7 (1-214)||(13965359-13965572)
chr7 (1-214)||(21755757-21755970)
chr7 (1-200)||(12712354-12712553)
chr7 (39-196)||(15627886-15628043)
chr7 (42-132)||(18181166-18181256)
chr7 (1-50)||(15810715-15810764)
chr7 (42-160)||(15157814-15157932)
chr7 (39-95)||(14043158-14043214)
chr7 (39-95)||(14353188-14353244)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-212)||(8728-8939)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-214)||(9481-9692)
[»] chr1 (22 HSPs)
chr1 (1-214)||(21742328-21742541)
chr1 (1-214)||(24096391-24096604)
chr1 (1-212)||(19857677-19857888)
chr1 (1-214)||(21738812-21739025)
chr1 (45-214)||(20832721-20832889)
chr1 (1-214)||(22015521-22015734)
chr1 (1-214)||(31536773-31536986)
chr1 (1-214)||(48426274-48426487)
chr1 (1-214)||(38909602-38909815)
chr1 (12-214)||(21961428-21961630)
chr1 (1-214)||(37680450-37680663)
chr1 (1-214)||(52989142-52989354)
chr1 (1-103)||(20853536-20853638)
chr1 (68-214)||(20297784-20297930)
chr1 (68-214)||(20074552-20074698)
chr1 (46-193)||(21044975-21045122)
chr1 (46-196)||(16379482-16379632)
chr1 (46-196)||(22117102-22117252)
chr1 (1-61)||(16670684-16670744)
chr1 (46-95)||(22402081-22402130)
chr1 (34-97)||(21228365-21228428)
chr1 (53-160)||(51330323-51330430)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-214)||(4916-5129)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-213)||(53130-53342)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-214)||(33079-33292)
[»] chr6 (21 HSPs)
chr6 (1-214)||(19456242-19456455)
chr6 (1-214)||(19466387-19466600)
chr6 (1-214)||(19438221-19438434)
chr6 (73-214)||(24515335-24515476)
chr6 (1-210)||(10465697-10465906)
chr6 (1-214)||(14376765-14376978)
chr6 (1-214)||(18797909-18798122)
chr6 (24-214)||(25771063-25771253)
chr6 (1-214)||(21566840-21567053)
chr6 (1-107)||(15462662-15462768)
chr6 (1-193)||(34642434-34642626)
chr6 (1-103)||(20010350-20010452)
chr6 (1-213)||(24367620-24367832)
chr6 (1-200)||(19881629-19881828)
chr6 (144-214)||(21474819-21474889)
chr6 (46-204)||(18660148-18660306)
chr6 (24-107)||(21474910-21474993)
chr6 (53-154)||(27205898-27205999)
chr6 (53-154)||(27243229-27243330)
chr6 (178-210)||(8720731-8720763)
chr6 (3-95)||(18404787-18404879)
[»] scaffold0222 (2 HSPs)
scaffold0222 (10-212)||(21200-21402)
scaffold0222 (1-214)||(194-407)
[»] chr2 (9 HSPs)
chr2 (1-214)||(19716261-19716474)
chr2 (1-214)||(19720824-19721037)
chr2 (1-214)||(23274579-23274792)
chr2 (1-214)||(23097262-23097475)
chr2 (1-196)||(12577357-12577552)
chr2 (1-214)||(20848574-20848785)
chr2 (42-160)||(10871887-10872005)
chr2 (34-95)||(23029866-23029927)
chr2 (1-97)||(22742210-22742306)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-214)||(522-735)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-214)||(5609-5822)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-214)||(164108-164321)
[»] chr8 (14 HSPs)
chr8 (1-214)||(21928849-21929062)
chr8 (1-214)||(31413679-31413892)
chr8 (1-214)||(22027427-22027640)
chr8 (1-210)||(29300573-29300782)
chr8 (1-212)||(22054286-22054497)
chr8 (9-214)||(19985601-19985806)
chr8 (1-214)||(28984332-28984545)
chr8 (24-214)||(22374290-22374480)
chr8 (12-214)||(16268382-16268584)
chr8 (1-64)||(21970698-21970761)
chr8 (1-96)||(22004228-22004323)
chr8 (34-97)||(15536921-15536984)
chr8 (42-132)||(22117366-22117456)
chr8 (46-160)||(22990520-22990634)
[»] chr4 (18 HSPs)
chr4 (1-214)||(15267131-15267344)
chr4 (16-214)||(14993086-14993284)
chr4 (1-214)||(18259796-18260009)
chr4 (24-214)||(15073714-15073904)
chr4 (1-214)||(16150991-16151204)
chr4 (1-214)||(16155137-16155350)
chr4 (1-214)||(3261498-3261711)
chr4 (1-214)||(11203936-11204149)
chr4 (3-214)||(20893386-20893597)
chr4 (1-196)||(51603496-51603691)
chr4 (1-196)||(53750174-53750369)
chr4 (1-214)||(7357622-7357835)
chr4 (1-214)||(44658570-44658783)
chr4 (68-214)||(29450308-29450454)
chr4 (1-103)||(27903851-27903952)
chr4 (34-97)||(16248153-16248216)
chr4 (42-160)||(14300467-14300585)
chr4 (75-196)||(14697474-14697595)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-214)||(590-803)
[»] chr5 (26 HSPs)
chr5 (1-214)||(23077791-23078004)
chr5 (1-214)||(21870164-21870377)
chr5 (1-214)||(21874444-21874657)
chr5 (1-214)||(23563054-23563267)
chr5 (1-213)||(25851342-25851554)
chr5 (12-214)||(14883888-14884090)
chr5 (25-196)||(17266244-17266415)
chr5 (1-214)||(20345551-20345764)
chr5 (3-103)||(20824833-20824933)
chr5 (1-107)||(28891828-28891934)
chr5 (1-214)||(22505948-22506161)
chr5 (39-198)||(23474497-23474656)
chr5 (1-103)||(22465330-22465432)
chr5 (1-61)||(28911674-28911734)
chr5 (1-61)||(28926942-28927002)
chr5 (1-103)||(20770518-20770620)
chr5 (45-198)||(21410437-21410590)
chr5 (42-163)||(27521741-27521862)
chr5 (147-214)||(23669901-23669968)
chr5 (1-103)||(20779293-20779395)
chr5 (42-88)||(22138078-22138124)
chr5 (42-160)||(22329817-22329935)
chr5 (3-88)||(16257924-16258009)
chr5 (42-95)||(22351322-22351375)
chr5 (3-88)||(22591643-22591728)
chr5 (3-88)||(22595198-22595283)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-214)||(1018-1231)
[»] scaffold0865 (1 HSPs)
scaffold0865 (9-214)||(987-1192)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-214)||(8128-8341)
[»] scaffold0133 (1 HSPs)
scaffold0133 (9-214)||(28000-28205)
[»] scaffold0074 (2 HSPs)
scaffold0074 (1-214)||(15456-15669)
scaffold0074 (46-196)||(6513-6663)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-214)||(70492-70705)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-214)||(98290-98503)
scaffold0020 (41-214)||(176371-176544)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-213)||(8169-8381)
scaffold0235 (1-213)||(18383-18595)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-214)||(3249-3462)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-214)||(48887-49100)
scaffold0067 (1-214)||(57921-58134)
scaffold0067 (1-210)||(30012-30221)
scaffold0067 (1-214)||(64309-64522)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-214)||(22506-22719)
[»] scaffold0053 (2 HSPs)
scaffold0053 (1-214)||(62479-62692)
scaffold0053 (1-186)||(65029-65214)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-214)||(116008-116221)
[»] scaffold1517 (1 HSPs)
scaffold1517 (1-214)||(1194-1407)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-214)||(34721-34934)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-214)||(153876-154089)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-213)||(252004-252216)
[»] scaffold0523 (2 HSPs)
scaffold0523 (1-214)||(5824-6034)
scaffold0523 (6-211)||(11455-11660)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-214)||(43126-43339)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-212)||(1555-1766)
[»] scaffold0192 (1 HSPs)
scaffold0192 (24-214)||(29911-30100)
[»] scaffold2062 (1 HSPs)
scaffold2062 (1-214)||(579-792)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-214)||(252-465)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-214)||(17021-17234)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-214)||(50489-50702)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-214)||(4161-4373)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-214)||(263610-263823)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-214)||(319627-319840)
scaffold0004 (149-214)||(326091-326155)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-214)||(203765-203978)
[»] scaffold0405 (1 HSPs)
scaffold0405 (9-211)||(5989-6191)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-214)||(17191-17404)
scaffold0348 (85-214)||(4640-4769)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-210)||(12121-12330)
scaffold0261 (1-210)||(20301-20510)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-214)||(249-462)
[»] scaffold0335 (1 HSPs)
scaffold0335 (12-214)||(4022-4224)
[»] scaffold0026 (1 HSPs)
scaffold0026 (12-214)||(52035-52237)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-214)||(40442-40655)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-214)||(43082-43295)
[»] scaffold0518 (1 HSPs)
scaffold0518 (3-214)||(2215-2426)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-214)||(5964-6177)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-213)||(6190-6401)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-208)||(37329-37536)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-214)||(23630-23843)
[»] scaffold0068 (1 HSPs)
scaffold0068 (3-214)||(66817-67028)
[»] scaffold1056 (1 HSPs)
scaffold1056 (12-214)||(2104-2305)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-214)||(5565-5777)
[»] scaffold0664 (2 HSPs)
scaffold0664 (17-214)||(7422-7619)
scaffold0664 (1-54)||(1-54)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-214)||(9495-9707)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-214)||(42119-42332)
[»] scaffold1914 (1 HSPs)
scaffold1914 (25-196)||(961-1132)
[»] scaffold1845 (1 HSPs)
scaffold1845 (3-214)||(1013-1224)
[»] scaffold0310 (1 HSPs)
scaffold0310 (3-214)||(11361-11572)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-199)||(54446-54644)
[»] scaffold1426 (1 HSPs)
scaffold1426 (1-214)||(1314-1527)
[»] scaffold0029 (1 HSPs)
scaffold0029 (3-103)||(93603-93703)
[»] scaffold0001 (1 HSPs)
scaffold0001 (6-214)||(514065-514273)
[»] scaffold0146 (1 HSPs)
scaffold0146 (84-214)||(74-204)
[»] scaffold0585 (1 HSPs)
scaffold0585 (48-209)||(615-775)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-214)||(8998-9211)
[»] scaffold0118 (1 HSPs)
scaffold0118 (17-214)||(845-1042)
[»] scaffold0708 (1 HSPs)
scaffold0708 (137-214)||(4988-5065)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-106)||(3758-3863)
[»] scaffold0190 (1 HSPs)
scaffold0190 (45-214)||(30077-30246)
[»] scaffold0270 (2 HSPs)
scaffold0270 (46-196)||(7275-7425)
scaffold0270 (46-196)||(14405-14555)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-107)||(63246-63352)
scaffold0054 (153-214)||(63378-63439)
[»] scaffold0100 (1 HSPs)
scaffold0100 (39-196)||(16354-16511)
[»] scaffold0679 (1 HSPs)
scaffold0679 (9-107)||(750-848)
[»] scaffold0165 (1 HSPs)
scaffold0165 (144-214)||(12328-12398)
[»] scaffold0098 (1 HSPs)
scaffold0098 (9-107)||(25951-26049)
[»] scaffold0077 (1 HSPs)
scaffold0077 (46-196)||(57366-57516)
[»] scaffold2165 (1 HSPs)
scaffold2165 (3-214)||(512-723)
[»] scaffold0507 (1 HSPs)
scaffold0507 (46-160)||(11466-11580)
[»] scaffold0342 (1 HSPs)
scaffold0342 (46-196)||(14017-14167)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-174)||(30334-30507)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-96)||(23005-23100)
[»] scaffold0130 (1 HSPs)
scaffold0130 (144-210)||(3742-3808)
[»] scaffold0008 (1 HSPs)
scaffold0008 (31-97)||(139347-139413)
[»] scaffold0605 (1 HSPs)
scaffold0605 (30-103)||(1775-1848)
[»] scaffold0285 (1 HSPs)
scaffold0285 (40-97)||(5499-5556)
[»] scaffold0012 (1 HSPs)
scaffold0012 (75-196)||(216201-216322)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-155)||(17682-17834)
[»] scaffold0529 (1 HSPs)
scaffold0529 (46-196)||(5490-5640)
[»] scaffold0259 (1 HSPs)
scaffold0259 (42-88)||(8765-8811)
[»] scaffold0148 (1 HSPs)
scaffold0148 (147-201)||(2396-2450)
[»] scaffold1600 (1 HSPs)
scaffold1600 (75-196)||(468-589)
[»] scaffold0457 (1 HSPs)
scaffold0457 (1-174)||(13761-13934)
[»] scaffold1423 (1 HSPs)
scaffold1423 (3-95)||(87-179)
[»] scaffold1274 (1 HSPs)
scaffold1274 (72-196)||(20-143)
[»] scaffold0273 (1 HSPs)
scaffold0273 (37-97)||(541-601)


Alignment Details
Target: scaffold0034 (Bit Score: 162; Significance: 1e-86; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1659 - 1872
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||    
T  1659 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagcagcatgatatatgaagaagatactaaagctcattacaaggtgat 1758  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| |||||||||||| || ||||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  1759 gagtgagcgcagaggtaagggacagcagagtcatcctaaaccatatagtgctcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcccaag 1858  T
Q  201 aggagagatgctcc 214  Q
    |||| |||||||||    
T  1859 aggatagatgctcc 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11613 - 11826
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||||| || ||||||||||||| |||||| || |||||||||||||| ||||||||    
T  11613 tcaagagagccatagggtatcaaaagattaaaattttctctgatttggtaagcagctgcaggatatatgaagaggacactaaggctcattataaggtgat 11712  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || |||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||||||    
T  11713 gagtgagagaagaggtaagggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaagcagagacttaatgatgagaggaggcccaag 11812  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  11813 aggagagatgctcc 11826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 70969 - 70867
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| |||||||||||||| | ||| | ||| || ||||| |||||||| || ||||||||    
T  70969 tcaaaagagccattgggtatcagaagatcagaaatttctctgaattggtgagtagctgtatgatttatgaggaggatacaaaggctcactataaggtgat 70870  T
Q  101 gag 103  Q
    |||    
T  70869 gag 70867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 12357459 - 12357672
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  12357459 tcaagagagccattaggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatatgaagaagacactaaagctcattacaaggtgat 12357558  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| |||||||||||| || |||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  12357559 gagtgagcgcagaggtaagggacatcagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagtagaggctgaatgatgagaggaggcccaag 12357658  T
Q  201 aggagagatgctcc 214  Q
    ||||||||| ||||    
T  12357659 aggagagatactcc 12357672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 18131279 - 18131492
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||| ||||||||||| |||||    
T  18131279 tcaagagagccattgggtatcagaagataagaattttctctgatatggtgagtagctgtaggatatatgaagaagacactaaagctcattacaaagtgat 18131378  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||| ||||| || |||| || |||||||||||||||||||||||||||  |||| ||||| |||||| |||||||||||||||||    
T  18131379 gagtgaacggagaggtaaaggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacagagactgaataatgagaggaggcccaag 18131478  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  18131479 aggagagatgctcc 18131492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16831460 - 16831673
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||||||||| ||| | |||||||| | ||| || || || || |||||||| ||||||||    
T  16831460 tcaagagagccatagggtaccaacagataagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacaccaaagctcattataaggtgat 16831559  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || ||||||| ||| || |||||||| |||||||| ||| | |||||||| || ||||||||||||||||| ||     
T  16831560 gagtgagcgaagaggtaagggacagcagagtcatcctaagccgtatagtgcccctgctgataagggtaagcagagacttaatgatgagaggaggccgaat 16831659  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  16831660 aggagagatgctcc 16831673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 35983378 - 35983165
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||||| ||| ||||| ||||| || || || || || | |||||| ||||| || |||||||| || |||||    
T  35983378 tcaagagggctattggttatcataagataagaaatttttctgaattggtaagcagttgtagaatctatgaagaggataccaaagctcattataaagtgat 35983279  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||||||| |||||||||||| || |||  ||  ||||| ||||||||||||||||||||  | || |||||||||||||||||||||||||| |||    
T  35983278 gagtgagtgcagaggtaagggacagcagagttgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaag 35983179  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  35983178 aggagagatgctcc 35983165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 17494847 - 17494631
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||||||||  || ||||| ||||| || ||||| || || | ||| || ||||| || |||||||||||||||||    
T  17494847 tcaagagagccattggttatcagaagataagaaacttttctgagttggtaagcagctgtagaatctatgaggaggataccaaagctcattacaaggtgat 17494748  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgac----aagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| ||| ||  |||||||||||||||| |   || ||||||||||||||||||| |    ||| | ||||||||| | |||||||||||||||||    
T  17494747 gagtgagcgcagagccaagggacaacaaagtcgttcgaagccatatagtgctcctgctggctgagaagggtaagcagaggttaaatgatgagaggaggcc 17494648  T
Q  197 caagaggagagatgctc 213  Q
    |||||||||||||||||    
T  17494647 caagaggagagatgctc 17494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 14290464 - 14290677
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||||| ||| ||||| ||||  || || || || || | |||||| ||||| || |||||||| || |||||    
T  14290464 tcaagagggctattggttatcaaaagataagaaatttttctgaattggaaagcagttgtagaatctatgaagaggataccaaagctcattataaagtgat 14290563  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| |||||||||||| || |||| ||  ||||| ||||||||||||||||||||  | || |||||||||||||||||||||||||| |||    
T  14290564 gagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaag 14290663  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  14290664 aggagagatgctcc 14290677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16384304 - 16384517
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||  |||| |||||||||||||||||||| ||| |||| ||||| | ||| || || |  || |||||||| ||||||||    
T  16384304 tcaagagagccataggataccaacagattagaattttctctgatttggtaagttgctgtaggatctatgaggaggacagcaaagctcattataaggtgat 16384403  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||||||||||||||| |||| || ||| ||||| ||||| |||||||||||| | |||||||| || ||||||||||||||||| ||     
T  16384404 gagtgagcgaagaggtaagggacaacagagtcgtcctaagccatacagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggccgaat 16384503  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  16384504 aggagagatgctcc 16384517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11958113 - 11958326
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||||||||| ||| |||||||||| ||||| || |||||| |||| | ||| ||||| || || | |||||||||||||||    
T  11958113 tcaaaagagctattgggtatcagaagattagagttttctctgagttggtaagcagctgcgggatttatgaggaagacacaaaagttcattacaaggtgat 11958212  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || | || || |||||| || |||||||||||||||||  | || |||||  |||||||||| |||||||  |||    
T  11958213 gagtgagaggagaggtaagggacagcagaatcgtcctaaaccttacagtgctcctgctgacaaagggaaacagagaatgaatgatgataggaggcttaag 11958312  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  11958313 aggagagatgctcc 11958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 12181541 - 12181328
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||| ||||||| |||||||| ||||| |  |||||||| ||||| ||  |||| ||||| | ||| || || || || |||||||||||||||||    
T  12181541 tcaagagaaccattggctatcagaaaataaggaacttctctgaattggtaagcggctgtaggatttatgaggaggacacgaaagctcattacaaggtgat 12181442  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||| ||||||||||| |||| ||| || || ||||||||||||||||||||| | ||| ||||| | ||||||||||||||| |||||    
T  12181441 gagtgaacgaagaggcaagggacaacagagtcgtctgaagccgtatagtgctcctgctgacaagggtaagtagaggttaaatgatgagaggaggaccaag 12181342  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  12181341 aggagagatgctcc 12181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16825211 - 16825424
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||||||||||||||  || ||||| ||||| || ||||| ||||| | |||||||||||| || |||||||||||||||||    
T  16825211 tcaagagggctattggttatcagaagataagaaacttttctgagttggtaagcagctgtaggatctatgaagaagatacgaaagctcattacaaggtgat 16825310  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||| |||||||| |  |||| ||  || || |||||||| ||| |||||||| | ||| ||||  |||| ||||||||||||||||||    
T  16825311 gagtgagcgcagaggcaagggacagctgagtcgtccgaagccgtatagtgcccctcctgacaagggtaagtagagattgaaagatgagaggaggcccaag 16825410  T
Q  201 aggagagatgctcc 214  Q
    | ||||||||||||    
T  16825411 atgagagatgctcc 16825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 12857436 - 12857641
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagt 108  Q
    |||||||| || || |||||||||||||| | |||||||||||||||||| || || | ||| || ||||| || |||||||| |||||||||||||||     
T  12857436 gccattggctaccaaaagataagaattttttttgatttggtgagtagctgtagaatctatgaggaggatacaaaagctcattataaggtgatgagtgagc 12857535  T
Q  109 gcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagaga 208  Q
    | | ||| ||||||||  | |||| ||  ||||| ||||||||||||||||||||  | || ||  | |||||||||||||||||||| || ||||||||    
T  12857536 gtagaggcaagggacagtagagtcgtccaaaaccgtatagtgctcctgctgacaaaggtaaacaaggactgaatgatgagaggaggcctaaaaggagaga 12857635  T
Q  209 tgctcc 214  Q
    ||||||    
T  12857636 tgctcc 12857641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28757516 - 28757303
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  28757516 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaagataat 28757417  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  28757416 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 28757317  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  28757316 aggagagatgctcc 28757303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 47127141 - 47126928
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||| ||| | ||    
T  47127141 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataagattat 47127042  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||||| ||  |||||| ||||||||||||    
T  47127041 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaggatgggtgatgataggaggcccaag 47126942  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  47126941 aggagagatgctcc 47126928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 31692117 - 31692328
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||| ||||||||    
T  31692117 tcaagagagccattgggtatcagaagatcagaaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattataaggtgat 31692216  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |   | || ||||| || |||| ||  || || ||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||     
T  31692217 gagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagttgaatgatgagaggaggcccaat 31692316  T
Q  201 aggagagatgct 212  Q
    |||||| |||||    
T  31692317 aggagaaatgct 31692328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 24190500 - 24190288
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| || |||||||| ||||  |||||||||||||| |||||||| || || | |||||| || || || |||||||||||||||||    
T  24190500 tcaagagggctattggataccagaagatcagaaacttctctgatttggtaagtagctgtagaatctatgaagaggacacgaaagctcattacaaggtgat 24190401  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    || |||  ||| ||| ||||  || || |||| ||  || || || |||||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  24190400 gactgaccgcagaggcaaggc-cagcagagtcgtccgaagccgtacagtgctcctgctgacaagggaaagcagagattgaatgatgagaggaggtacaag 24190302  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  24190301 aggagagatgctcc 24190288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 31942100 - 31941887
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||| ||||||||    
T  31942100 tcaagagagccattgggtatcagaagatcagaaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattataaggtgat 31942001  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |   | || ||| | || |||| ||  || || ||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||     
T  31942000 gagtgatcgaaggagcaaaggatagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagttgaatgatgagaggaggcccaat 31941901  T
Q  201 aggagagatgctcc 214  Q
    |||||| |||||||    
T  31941900 aggagaaatgctcc 31941887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 17189570 - 17189358
Alignment:
Q  2 caagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatg 101  Q
    |||||| || ||||| || |||||||| ||||  |||| ||| ||||| |||||||| || || | |||||| || || || ||||||||||||||||||    
T  17189570 caagagggctattggataccagaagatcagaaacttctttgagttggtaagtagctgtagaatctatgaagaggacacaaaagctcattacaaggtgatg 17189471  T
Q  102 agtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaaga 201  Q
    |||||  ||| ||| ||||| || || |||| ||  || || || |||||||||||| ||||| ||||||||||  | ||||||||||||||| ||||||    
T  17189470 agtgaccgcagaggcaagggccagcagagtcgtccgaagccgtacagtgctcctgctaacaagggaaagcagagatttaatgatgagaggaggtccaaga 17189371  T
Q  202 ggagagatgctcc 214  Q
    |||||||||||||    
T  17189370 ggagagatgctcc 17189358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 10409165 - 10408952
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||| |||||| |||| ||| |||| ||||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  10409165 tcaaaagagctattggatatcagcagatcagagttttttctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaagataat 10409066  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || ||| || || |||||||||||||||||| | || |||| | ||  |||||| ||||||||||||    
T  10409065 gagtgagaggaggggtaagggacaccagagtcgtcctaagccttacagtgctcctgctgacaagggtaaacagaagatgggtgatgataggaggcccaag 10408966  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  10408965 aggagagatgctcc 10408952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 8744322 - 8744517
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||| |||| |||||||||||||||||||||||| |||| ||||| |  || || || || || |||||||| || |||||    
T  8744322 tcaagagagccataggataccagcagattagaattttctctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaagtgat 8744421  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| | | |||||||||||| || | || || |||||| |||||||| ||  |||| ||| | |||||||| || |||||||||||||||||    
T  8744422 gagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggcc 8744517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 13945221 - 13945026
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||  |||| |||||||||||||||||||||||| |||| ||||| |  || || || || || |||||||| ||||||||    
T  13945221 tcaagagagccataggataccaacagattagaattttctctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaggtgat 13945122  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| | | |||||||||||| || | || || |||||| |||||||| ||  |||| ||| | |||||||| || |||||||||||||||||    
T  13945121 gagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggcc 13945026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 16326641 - 16326846
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||| |||||||||||| |||| ||| | |||||||| ||||| |  || |||||||| | ||||||||| || || |||||||||||| | ||||    
T  16326641 aagagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagttgcaggatttatgaagaagacaccaaagctcattacaagataatga 16326740  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    ||||| | |  || |||||||| || |||| || ||| ||  | |||||||||||||||||  ||||||| | | |||||||||| ||||| ||||||||    
T  16326741 gtgagaggaggggcaagggacagcagagtcgtcctaagcctgacagtgctcctgctgacaaaggaaagcaaaaggtgaatgatgataggagacccaagag 16326840  T
Q  203 gagaga 208  Q
    ||||||    
T  16326841 gagaga 16326846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 10416979 - 10417079
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    ||||||||||| || ||||||||||| ||||||||||| ||  |||||||||||||||| || | ||| || ||||| ||||||||||||||||||||||    
T  10416979 aagagagccataggatatcagaagatcagaattttctcagaactggtgagtagctgcagaatttatgaggaggatacgaaggctcattacaaggtgatga 10417078  T
Q  103 g 103  Q
    |    
T  10417079 g 10417079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 2245612 - 2245710
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgag 107  Q
    |||||||| ||||||||||| ||||  || ||||| |||||||||||||  ||||| | ||| || ||||| || |||||||| |||||||||||||||    
T  2245612 gccattggttatcagaagattagaaacttttctgagttggtgagtagctttaggatttatgaggatgataccaaagctcattataaggtgatgagtgag 2245710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13317501 - 13317603
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| | || |||||| || |||||||| || || ||||||| ||| || ||||| |||||||| || |||| |||    
T  13317501 tcaagagagccattggatatcagaagatcataaatttctcggagttggtgagcagttgtaggatatatgaggaggatacaaaggctcactataaggcgat 13317600  T
Q  101 gag 103  Q
    |||    
T  13317601 gag 13317603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 12508497 - 12508694
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| |||||||||||  | |  || |||||  ||||||| || ||||| || | |||  | ||||| || |||||||||||||  ||    
T  12508497 tcaagagggccattggatatcagaagatctgtaacttttctgaactggtgagcagttgcagaatctatgagaaggatacgaaagctcattacaaggctat 12508596  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggccca 198  Q
    ||||||| | ||||||||| | || ||||||| ||  || || || |||||||| ||||| ||| |  |||||||| |||||||||||| ||||||||    
T  12508597 gagtgagaggaaaggtaagagtcagcaaagtcgtccaaagccttacagtgctccggctgataagggtgagcagagggtgaatgatgagaagaggccca 12508694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 16695318 - 16695255
Alignment:
Q  34 ttttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    ||||| ||||||| |||| |||||||||||| | ||| || |||||||||||||||||||||||    
T  16695318 ttttccctgatttagtgaatagctgcaggatctatgaggaggatactaaggctcattacaaggt 16695255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 196
Target Start/End: Complemental strand, 19727890 - 19727752
Alignment:
Q  57 tgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctg 156  Q
    ||||| |||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| || || || ||||||| ||  || || || ||||||||||    
T  19727890 tgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagagaaaaggcaa-ggtcagcaaagtcttccaaagccttacagtgctcctg 19727792  T
Q  157 ctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    |||| ||| | || || ||  |||||||||||||||||||    
T  19727791 ctgataagggcaaacaaagattgaatgatgagaggaggcc 19727752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 10008732 - 10008625
Alignment:
Q  53 tagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgct 152  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || ||||||||||| || |||| || ||| || || |||||     
T  10008732 tagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcc 10008633  T
Q  153 cctgctga 160  Q
    ||||||||    
T  10008632 cctgctga 10008625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 10909342 - 10909235
Alignment:
Q  53 tagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgct 152  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || ||||||||||| || |||| || ||| || || |||||     
T  10909342 tagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcc 10909243  T
Q  153 cctgctga 160  Q
    ||||||||    
T  10909242 cctgctga 10909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2036846 - 2036931
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| |||||||||||| |||| ||| | || || || ||||||| |||||||||||||| ||| || ||||| || |||||    
T  2036846 aagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctca 2036931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2040587 - 2040672
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| |||||||||||| |||| ||| | || || || ||||||| |||||||||||||| ||| || ||||| || |||||    
T  2040587 aagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctca 2040672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 14039941 - 14039856
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| |||||||||||| |||| ||| | || || || ||||||| |||||||||||||| ||| || ||||| || |||||    
T  14039941 aagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctca 14039856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 14873561 - 14873622
Alignment:
Q  34 ttttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    |||||||||| |||||||  || |||||||||| ||| || ||||| |||||||||||||||    
T  14873561 ttttctctgagttggtgaacagttgcaggatatatgaggaggataccaaggctcattacaag 14873622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 11861501 - 11861381
Alignment:
Q  40 ctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaa 139  Q
    |||| ||||||| |||||| || || | ||| ||||| || |||||||||||||||||  ||| |||||| ||  ||||||| || || ||||| | |||    
T  11861501 ctgagttggtgaatagctgtagaatctatgaggaagacaccaaggctcattacaaggttgtgaatgagtggaagagtaagggccaccagagtcaccctaa 11861402  T
Q  140 accatatagtgctcctgctga 160  Q
     || |||||||| ||||||||    
T  11861401 gccctatagtgcccctgctga 11861381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 1101 - 888
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| || |||| |||||||||||||||||||||    
T  1101 tcaagagagccattgggtatcagaagattagaattttctctgagttggtgagtagctgcagaatatatgaggaggataataaggctcattacaaggtgat 1002  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||||||||||||||| |||| || |||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||| |||    
T  1001 gagtgagcgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagagattgaatgatgagaggaggcctaag 902  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  901 aggagagatgctcc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5650 - 5437
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  5650 tcaagagaaccattgggtatcagaagataagaattttctctgagttggtgagtagctgcaggatatatgaagaagatactaaagctcattacaaggtgat 5551  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||| |||||||| |||| || |||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||| |    
T  5550 gagtgaacgaagaggtaaaggacaacagagtcgtcctaaaccatatagtgctcctgctgataagggaaaacagaggttgaatgatgagaggaggcccacg 5451  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  5450 aggagagatgctcc 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 39042 - 39253
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||||||||| |||||||| ||||||||||  || |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  39042 tcaagagagccattgggtaccagaagattagaattttct--gagttggtgagtagctgcaggatatatgaggaagatactaaagctcattacaaggtgat 39139  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||||||||| || |||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39140 gagtgaacgaagaggtaagggacagcagagtcttcctaaaccatatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggaggcccaag 39239  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  39240 aggagagatgctcc 39253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 180548 - 180648
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    ||||||||||| || ||||||||||| ||||||||||| ||  |||||||||||||||| || | ||| || ||||| ||||||||||||||||||||||    
T  180548 aagagagccataggatatcagaagatcagaattttctcagaaatggtgagtagctgcagaatttatgaggaggatacgaaggctcattacaaggtgatga 180647  T
Q  103 g 103  Q
    |    
T  180648 g 180648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 5474 - 5381
Alignment:
Q  39 tctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtc 132  Q
    ||||| |||||||| |  ||||| |||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| ||||| || |||||||    
T  5474 tctgagttggtgagcaattgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtc 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 3222 - 3015
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3222 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatatgaagaagatactaaagctcattacaaggtgat 3123  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
          ||| | ||||||  |||| || ||||||| |||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  3122 ------gtgtagaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaag 3029  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  3028 aggagagatgctcc 3015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 13677003 - 13676796
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13677003 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatatgaagaagatactaaagctcattacaaggtgat 13676904  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
          ||| | ||||||  |||| || ||||||| |||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  13676903 ------gtgtagaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaag 13676810  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  13676809 aggagagatgctcc 13676796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16947163 - 16947376
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||||| ||||| || |||||||||||||||||    
T  16947163 tcaaaagagccattgggtatcagaagattagaattttctctgaattggtgagtagctgcagaatctatgaagaggatacgaaagctcattacaaggtgat 16947262  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || ||||||||| ||||| |||||||||||| ||||||||||  ||||||||||||| |||||||||    
T  16947263 gagtgagagaaggggtaagggacagcagagtcgtcctaaaccatacagtgcccctgctgacaagggaaagcagagaatgaatgatgagagaaggcccaag 16947362  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  16947363 aggagagatgctcc 16947376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 19150558 - 19150356
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    ||||| ||||| ||||||||||  || || || |||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||| |||    
T  19150558 attggttatcaaaagataagaaacttttccgaattggtgagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgca 19150459  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
     |||||||||||| || |||| ||  || || | |||||| |||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||    
T  19150458 taggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgc 19150359  T
Q  212 tcc 214  Q
    |||    
T  19150358 tcc 19150356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 20749957 - 20749755
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    ||||| ||||| ||||||||||  || || || |||||||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||| |||    
T  20749957 attggttatcaaaagataagaaacttttccgaattggtgagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgca 20749858  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
     |||||||||||| || |||| ||  || || | |||||| |||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||    
T  20749857 taggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgc 20749758  T
Q  212 tcc 214  Q
    |||    
T  20749757 tcc 20749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 13024902 - 13024689
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||||||||| ||| |||||||||| ||||| || ||||||||||||| ||| ||||| || || |||||||||||||||||    
T  13024902 tcaaaagagctattgggtatcagaagattagagttttctctgagttggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtgat 13024803  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||  | | || || |||||| || |||||||||||||||||  | ||||||||| |||||||||| ||||||||||||    
T  13024802 gagtgagaggaggggtaagggacagtagaatcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaag 13024703  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  13024702 aggagagatgctcc 13024689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 14260937 - 14261150
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||| |||||| ||||| || |||||||||||||||||    
T  14260937 tcaagagggctattggctatcaaaagataaggaatttctctgagttggtgagtagctgcaggatatatgaagaggatacgaaagctcattacaaggtgat 14261036  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
     |||||| ||||||||||||||||  | |||| ||  || || |||||||| |||||||||||| | ||| |||| |||||||||||||||||||| |||    
T  14261037 cagtgagcgcaaaggtaagggacagtagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagtagagactgaatgatgagaggaggcctaag 14261136  T
Q  201 aggagagatgctcc 214  Q
     ||||| |||||||    
T  14261137 gggagatatgctcc 14261150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11385120 - 11385333
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| |||| ||| ||||| ||||| || |||||||| || | ||| |||||| | || |||||||||||| ||||    
T  11385120 tcaagagggccattggctatcagaagatcagaactttttctgagttggtaagcagctgcagaatctatgaggaagattcaaaagctcattacaagatgat 11385219  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| ||||||| ||| || || ||||| |||||||||||| |||||||  | |||||||||||||| |||||||||    
T  11385220 gagtgagcggaggggtaagggacaacagagtcatcctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaag 11385319  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  11385320 aggagagatgctcc 11385333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 12460186 - 12459977
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || || |||||||||||||| ||| |||||||||| |||||||| ||||||||||||| ||| ||||| || || |||||||||||||||||    
T  12460186 tcaagagggctatagggtatcagaagattagagttttctctgagttggtgagcagctgcaggatatatgaggaagacacaaaagctcattacaaggtgat 12460087  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || ||| || || | ||||| |||||||||| |||||||||   |||||||||| ||||||||||||    
T  12460086 gagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctgacaagggaaagcagaaaatgaatgatgataggaggcccaag 12459987  T
Q  201 aggagagatg 210  Q
    ||||||||||    
T  12459986 aggagagatg 12459977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12798195 - 12798407
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||||||||||||||  || ||||| ||||| || ||||| ||||| | |||||| ||||| || |||| ||||||||||||    
T  12798195 tcaagagggctattggttatcagaagataagaaacttttctgagttggtaagcagctgtaggatttatgaagaggatacgaaagctctttacaaggtgat 12798294  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||| |||||||| || |||| ||  || || ||||||||||||||||||||| | ||||||||  |||||||||||||||||| ||||    
T  12798295 gagtgagcgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagagattgaatgatgagaggaggctcaag 12798394  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  12798395 aggagagatgctc 12798407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 14145219 - 14145006
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||  |||| ||||||||| |||||||||||||| | |||||||| | ||| || |  || || |||||||| ||||||||    
T  14145219 tcaagagagccataggataccaacagattagaattttccctgatttggtgagtcgttgcaggatctatgaggagggcaccaaagctcattataaggtgat 14145120  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || ||| || || ||||| |||||||||||| | |||||||| || |||||||||||||||||  |     
T  14145119 gagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggccatat 14145020  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  14145019 aggagagatgctcc 14145006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 18050644 - 18050839
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||| |||| |||||||||||||||||||||||| |||| ||||| |  || || || || || |||||||| ||||||||    
T  18050644 tcaagagagccataggataccagcagattagaattttctctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaggtgat 18050743  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| | | |||||||||||| || | || || |||||| |||||||||||  |||| ||| | |||||||| || |||||||||||||||||    
T  18050744 gagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgctccgactgataagggtaagcagagacttaatgatgagaggaggcc 18050839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 26091489 - 26091702
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  26091489 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaagataat 26091588  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  26091589 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 26091688  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  26091689 aggagagatgctcc 26091702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 26115281 - 26115494
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||| | ||    
T  26115281 tcaagagagccattggatatcagcagatcagagtcttctctgagttggttaacaggtgtagaatctatgaagaagacaccaaagctcattacaagataat 26115380  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||| |||| | || || ||| || || |||||||||||||||||  ||||||||| | ||| |||||| ||||||||||||    
T  26115381 gagtgagaggaggggtaagggataacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgagtgatgataggaggcccaag 26115480  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  26115481 aggagagatgctcc 26115494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 15099377 - 15099507
Alignment:
Q  84 gctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatg 183  Q
    |||||||||||||||||||||||| | | ||| |||||||| || |||| ||  |  || ||||||||||||||||||||| | ||||||||| | ||||    
T  15099377 gctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgacgccgtatagtgctcctgctgacaagggtaagcagaggttaaatg 15099476  T
Q  184 atgagaggaggcccaagaggagagatgctcc 214  Q
    ||| |||||||||||||||||||||||||||    
T  15099477 atgggaggaggcccaagaggagagatgctcc 15099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 14283065 - 14283278
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||| ||| ||||| ||  |||| |||||||||||||||||||| ||| | |||||||| | ||| || || ||||| |||||||||||||||||    
T  14283065 tcaagagagtcatagggtagcaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacactaaagctcattacaaggtgat 14283164  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |    ||||||||| || ||||  |  || || |||||||| |||||||| ||| | |||||||| || ||||||||||||||||||       
T  14283165 gagtgagagaaggaataagggacagcagagtcgcccgaagccgtatagtgcccctgctgataagggtaagcagagactcaatgatgagaggaggcccgtt 14283264  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  14283265 aggagagatgctcc 14283278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40924508 - 40924721
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| | | | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||| ||| | ||    
T  40924508 tcaaaagagctattgggtatcagcagatcaaagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataagattat 40924607  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  40924608 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 40924707  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  40924708 aggagagatgctcc 40924721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 49155859 - 49155646
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| || || | ||| ||||| || | ||||||||| || || |||||||| ||| | ||    
T  49155859 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttagttaatagatgcagaatctatgaagaagacaccaaagctcattataagattat 49155760  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||||| ||  ||| || ||||||||||||    
T  49155759 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaggatgggtgaggataggaggcccaag 49155660  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  49155659 aggagagatgctcc 49155646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13005023 - 13004824
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| || ||| | ||||| ||| | ||||||||||| || | |||||||||| | ||||||||||||||||||||    
T  13005023 tcaagagggccattggttatcagaagatcaggattctttctgagttgataagtagctgcagaatctatgaagaagattcaaaggctcattacaaggtgat 13004924  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |  || ||||||||||| |||| || ||| || || || || ||||||| |||| |||||||  | |||||||||||||| || ||||||    
T  13004923 gagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagcgcccctgctggcaagggaaagcaacgactgaatgatgagagaagacccaag 13004824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 13965359 - 13965572
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | || ||||| ||||| |  || ||  |||| | ||||||||| || || ||||||||| || | ||    
T  13965359 tcaaaagagctattgggtatcagcagatcagagtcttttctgagttggttaacaggtgttggatttatgaagaagacaccaaagctcattaccagataat 13965458  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  13965459 gagtgagaggaggggtaagggacaacataatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 13965558  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  13965559 aggagagatgctcc 13965572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 21755970 - 21755757
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| |  || |||||||||||| | ||    
T  21755970 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacatcaaagctcattacaagataat 21755871  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||||| || || ||| || || |||||||||||||||||  |||||||||   ||| |||||| | |||||| |||    
T  21755870 gagtgagaggaggggtaagggacaacaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaatatgagtgatgacatgaggcctaag 21755771  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  21755770 aggagagatgctcc 21755757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12712354 - 12712553
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| |||| | | | ||| ||| | ||||||||||| || | ||| |||||| | |||||||||| |||||||||    
T  12712354 tcaagagggccattggctatcagaagattagaactctttatgagttgataagtagctgcagaatctatgaggaagattcaaaggctcattccaaggtgat 12712453  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |  || ||||||||||| |||| || ||| || || |||||||||||||  ||| |||||||  | |||||||||||||| || ||||||    
T  12712454 gagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagtgctcctgctggtaagggaaagcaacgactgaatgatgagagaagacccaag 12712553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 15628043 - 15627886
Alignment:
Q  39 tctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatctta 138  Q
    ||||| ||||| ||||| ||| |||| | ||| || ||||| || |||||||||||||| |||| |||| | ||| ||||| | |||||||||| ||  |    
T  15628043 tctgaattggtaagtagttgccggatctatgaggaggatacgaaagctcattacaaggttatgaatgagaggaaaagtaagagtcaacaaagtcgtccaa 15627944  T
Q  139 aaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    | || || |||||||||||||| ||| | || || ||| |||||||||||| ||||||    
T  15627943 agccttacagtgctcctgctgataagggtaaacaaagggtgaatgatgagaagaggcc 15627886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 18181256 - 18181166
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtc 132  Q
    |||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || |||||||||||||| ||||    
T  18181256 gatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtc 18181166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15810764 - 15810715
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtg 50  Q
    |||| ||||| ||||||||||||||||| |||||||||||||| ||||||    
T  15810764 tcaaaagagctattgggtatcagaagattagaattttctctgagttggtg 15810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 15157814 - 15157932
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaac 141  Q
    |||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || || |||||||| || |||| || ||| |    
T  15157814 gatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagagaaagggcaagggacagcagagtcgtcctaagc 15157913  T
Q  142 catatagtgctcctgctga 160  Q
    | || ||||| ||||||||    
T  15157914 cgtacagtgcccctgctga 15157932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 14043214 - 14043158
Alignment:
Q  39 tctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    |||||| ||||||| || |||||||| | ||| || |||||||||||||||||||||    
T  14043214 tctgatctggtgagcagttgcaggatttatgaggaggatactaaggctcattacaag 14043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 14353244 - 14353188
Alignment:
Q  39 tctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    |||||| ||||||| || |||||||| | ||| || |||||||||||||||||||||    
T  14353244 tctgatctggtgagcagttgcaggatttatgaggaggatactaaggctcattacaag 14353188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 8728 - 8939
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||| ||||||| ||    
T  8728 tcaagagagccattgggtatcagaaggttagaattttctctgagttggtgagtagctgcaggatatatgaggaagatactaaagctcatgacaaggttat 8827  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||| ||| | || |||  || ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8828 gagtgaacgaagaggtaaaggatagcagagttgtcataaaccatatagtgctcctgcagacaagggaaagcagaggctgaatgatgagaggaggcccaag 8927  T
Q  201 aggagagatgct 212  Q
    ||||||||||||    
T  8928 aggagagatgct 8939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 9481 - 9692
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | ||  ||||||||||||| ||||||||||||    
T  9481 tcaagagagccattgggtatcagaagataagaatcttctctgagttggtgagtagctgcaggatatgaggag--gatactaaggctctttacaaggtgat 9578  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||| ||||| || ||||||| ||||||||||||||||| |||||| ||| ||||||| ||| ||||||||||||||||||| ||     
T  9579 gagtgaacgaagaggtaaaggacagcagagtcatcctaaaccatatagtgctcttgctgataagggaaagcaaaggatgaatgatgagaggaggccaaac 9678  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  9679 aggagagatgctcc 9692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 9e-63; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21742328 - 21742541
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| || |||||||||||||||||    
T  21742328 tcaagagggctattggttatgagaagataagaattttctctgagttggtgagtagctgcaggatatatgaagaggatacgaaagctcattacaaggtgat 21742427  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||||||||||||  | |||| ||  ||||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||| |||    
T  21742428 gagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctactgacaagggtaagcagagactgaatgatgagaggaggcctaag 21742527  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  21742528 aggagagatgctcc 21742541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 24096391 - 24096604
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| ||| ||||| || || ||||||||||||||||     
T  24096391 tcaaaagagctattgggtatcagaagattagaattttctctgagttggtgagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtgac 24096490  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | | ||||||||||||| |||| || |||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  24096491 gagtgagcgaagaagtaagggacaacagagtcgtcctaaaccttatagtgctcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaag 24096590  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  24096591 aggagagatgctcc 24096604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 19857888 - 19857677
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| ||||  || ||||| ||||| || ||||| | ||| | |||||| ||||||||||||||||||||||||||    
T  19857888 tcaagagagccattggctatcagaagattagaaacttttctgagttggtaagcagctgtaagatctatgaagaggatactaaggctcattacaaggtgat 19857789  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||||||||||||||| |||| || |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||    
T  19857788 gagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaag 19857689  T
Q  201 aggagagatgct 212  Q
    ||||||||||||    
T  19857688 aggagagatgct 19857677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21738812 - 21739025
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| ||| |||| | ||| ||||| ||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||    
T  21738812 tcaagagggctattggctatcaaaaggtaaggaatttttctgaattggtaagtagctgcaggatatatgaagaggatacgaaagctcattacaaggtgat 21738911  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||||||||||||||| |||| ||  || |||||||| || | |||||||||| | ||||||||  ||||||||||||||||||| |||    
T  21738912 gagtgaccgcagaggtaagggacaacagagtcgtccgaagccatatagcgcccatgctgacaagggtaagcagagattgaatgatgagaggaggcctaag 21739011  T
Q  201 aggagagatgctcc 214  Q
    ||||||| ||||||    
T  21739012 aggagaggtgctcc 21739025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 20832721 - 20832889
Alignment:
Q  45 ttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccat 144  Q
    |||||||| ||||| || || | |||| ||||||| || |||||||||||||||||||||||  | | ||| |||||||| || |||| || ||||| ||    
T  20832721 ttggtgagcagctgtagaatctatgaataagatacgaaagctcattacaaggtgatgagtgaccgtagaggcaagggacagcagagtcgtcctaaac-at 20832819  T
Q  145 atagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20832820 atagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcc 20832889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22015521 - 22015734
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||| |||||||  |||||||||||||| || ||||| ||||| | |||||||| ||| || |||||||||||||||||    
T  22015521 tcaagagggctattggttatcagaaaataagaaacttctctgatttggtaagcagctgtaggatctatgaagaagttacgaaagctcattacaaggtgat 22015620  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  || |||||||| || |||| ||  || || ||||||||||||||||||||| | ||| ||||  | ||||||||||||||||| |||    
T  22015621 gagtgagcgtaggggaaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagaataaatgatgagaggaggccaaag 22015720  T
Q  201 aggagagatgctcc 214  Q
    | ||||||||||||    
T  22015721 aagagagatgctcc 22015734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31536773 - 31536986
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||| | ||    
T  31536773 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagatgtagaatttatgaagaagacaccaaagctcattacaagataat 31536872  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || ||||||||||||||||||||  ||||||||||| |||||||||| ||||| ||||||    
T  31536873 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcagaggatgaatgatgataggagacccaag 31536972  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  31536973 aggagagatgctcc 31536986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 48426487 - 48426274
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  48426487 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaagataat 48426388  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  48426387 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 48426288  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  48426287 aggagagatgctcc 48426274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 38909602 - 38909815
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||| | ||    
T  38909602 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagatgtagaatttatgaagaagacaccaaagctcattacaagataat 38909701  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||| | | |  |||||||||||||| | || || |||||| || |||||||||||||||||  ||||||||||| ||  |||||| ||||||||||||    
T  38909702 gagtgggaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcagaggatgggtgatgataggaggcccaag 38909801  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  38909802 aggagagatgctcc 38909815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 21961630 - 21961428
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    |||||||||||| |||| ||| | |||||||| ||||| |  || ||||  || | ||||||||| || || |||||||||||| | ||||||||| | |    
T  21961630 attgggtatcagcagatcagagtcttctctgaattggtaaacagatgcataatttatgaagaagacaccaaagctcattacaagataatgagtgagagga 21961531  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
     |||||||||||| || | || || ||| || || ||||||||| |||||||  ||||||||| | |||||||||| ||||| |||||||||||||||||    
T  21961530 gaggtaagggacagcagaatcgtcctaagccttacagtgctccttctgacaaaggaaagcagaagatgaatgatgataggagacccaagaggagagatgc 21961431  T
Q  212 tcc 214  Q
    |||    
T  21961430 tcc 21961428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 37680663 - 37680450
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||| ||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  37680663 tcaaaagagctattgggtatcagcagatcagagtcttctttgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaagataat 37680564  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || ||||||||| |||||||  ||||||||| | ||  |||||| ||||||||||||    
T  37680563 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcagaagatgggtgatgataggaggcccaag 37680464  T
Q  201 aggagagatgctcc 214  Q
    ||||||||| ||||    
T  37680463 aggagagatactcc 37680450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 52989354 - 52989142
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||  | ||    
T  52989354 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacaccaaagctcattacaaa-taat 52989256  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| |||| || || ||| || || |||||||||||||||||  ||||||||| | |||||||||| |||||||| |||    
T  52989255 gagtgagaggaggggtaagggacagcaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaag 52989156  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  52989155 aggagagatgctcc 52989142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20853536 - 20853638
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || || | ||| || ||||| ||||||||||| ||||||||    
T  20853536 tcaagagagccattggatatcagaagatcagaattttctcagaattggtgagtagctgtagaatttatgaggaggatacaaaggctcattataaggtgat 20853635  T
Q  101 gag 103  Q
    |||    
T  20853636 gag 20853638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 20297930 - 20297784
Alignment:
Q  68 tgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcga 167  Q
    ||||||||| || || |||||||||||| | ||||||||| | |  ||||||||||| || | || || ||| || || ||||||||| |||||||| ||    
T  20297930 tgaagaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggacatcagaatcgtcctaagccttacagtgctcctactgacaaggga 20297831  T
Q  168 aagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    || |||| | ||  |||||| ||||||||||||||||||||||||||    
T  20297830 aaacagaagatgggtgatgacaggaggcccaagaggagagatgctcc 20297784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 20074552 - 20074698
Alignment:
Q  68 tgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcga 167  Q
    ||||||||| || || |||||||||||| | ||||||||| | |  ||||||||||| || | || || ||| || || |||||| ||||||||||  ||    
T  20074552 tgaagaagacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgcttctgctgacaaagga 20074651  T
Q  168 aagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    ||||||| | ||| |||||| |||||||  |||||||||||||||||    
T  20074652 aagcagaagatgagtgatgacaggaggcttaagaggagagatgctcc 20074698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 193
Target Start/End: Original strand, 21044975 - 21045122
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || ||||| |||| ||| ||||||||||||||||||||||||||  ||| | || | ||||| ||||| || ||||||| ||  || || ||    
T  21044975 tggtgagcagttgcagaatatatgaggaagatactaaggctcattacaaggttgtgaataagaggaaaggcaagggtcagcaaagtcgtccaaagcctta 21045074  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggag 193  Q
     |||||||||||||| ||| | ||||| ||  | ||||||||||||||    
T  21045075 cagtgctcctgctgataagggcaagcaaagagttaatgatgagaggag 21045122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 16379632 - 16379482
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || |||||||| | ||| || |||||||||||||||||||||||  ||| |||| | ||||| ||||| ||||| |||| || ||| || ||    
T  16379632 tggtgagcagatgcaggatttatgaggaggatactaaggctcattacaaggttgtgaatgagcggaaaggcaagggtcaacagagtcgtcctaagcctta 16379533  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||||  ||||||| ||| | || |||||  | |||||||||||||||||    
T  16379532 cagtgcctctgctgataagggcaaacagagagttaatgatgagaggaggcc 16379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 22117252 - 22117102
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || ||||| ||||  || ||||||||||||||||||||||||||  ||| |||| | ||||| ||||| || ||||||| ||  || || ||    
T  22117252 tggtgagcagttgcagaatatacgaggaagatactaaggctcattacaaggttttgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagcctta 22117153  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||| ||||||||| ||| |||| || ||  | |||||||||||||||||    
T  22117152 cagtgttcctgctgataagggaaaacaaagagttaatgatgagaggaggcc 22117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16670684 - 16670744
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcag 61  Q
    |||| |||||||| || ||||||||||| ||||||||||| || |||||||||||||||||    
T  16670684 tcaaaagagccataggatatcagaagatcagaattttctcagaattggtgagtagctgcag 16670744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 22402130 - 22402081
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    ||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  22402130 tggtgagtagctgcaggatttatgaggaggatactaaggctcattacaag 22402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 21228365 - 21228428
Alignment:
Q  34 ttttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    ||||| ||||||| || | |||||||||||| | ||| || |||||||||||||||||||||||    
T  21228365 ttttccctgatttagttaatagctgcaggatctatgaggaggatactaaggctcattacaaggt 21228428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 51330323 - 51330430
Alignment:
Q  53 tagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgct 152  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || ||||||||||| || |||| || ||| || || |||||     
T  51330323 tagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcc 51330422  T
Q  153 cctgctga 160  Q
    ||||||||    
T  51330423 cctgctga 51330430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4916 - 5129
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||| ||||| ||||| |||||||||||||||||    
T  4916 tcaagagagccattgggtatcagaagattagaattttctctgaattggtgagtagctgcatgatatatgaggaagacactaaagctcattacaaggtgat 5015  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||| ||| |  | |||| || |||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||| | |    
T  5016 gagtgaacgaagaggtaaaggaaagtagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagcaaaggctgaataatgagaggtggcctagg 5115  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  5116 aggagagatgctcc 5129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 53130 - 53342
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||| ||| ||||| || ||||||||||| ||||||||    
T  53130 tcaagagagccattgggtatcaaaagattagaatcttctcggatttggtgagtagctgcaggatatatgaggaagacaccaaggctcattataaggtgat 53229  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | || ||||||||| |||  || || ||||||||| ||||| |||||||||||| ||||||||||  ||||||||||||||||||||||     
T  53230 gagtgagcgaagagataagggacatcaagttcgtcctaaaccatacagtgcccctgctgacaagggaaagcagagattgaatgatgagaggaggcccaat 53329  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  53330 aggagagatgctc 53342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 33079 - 33292
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||| ||||| |||||||||||||| ||||| || ||||||||||||| ||| ||||| || || |||||||||||||||||    
T  33079 tcaaaagagctattgggtatcaaaagattagaattttctctgagttggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtgat 33178  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || ||||||||| |||||||||||||||||  |||| |||||| |||||||||||||||||||||||    
T  33179 gagtgagcgaaggggtaagggacagcagagtcgtcctaaaccatacagtgctcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaag 33278  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  33279 aggagagatgctcc 33292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 5e-58; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19456455 - 19456242
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||  ||||| ||||| |||||||||| |||||| || || || || ||||||||||||| |||||| ||||||||||||||||||||| || |    
T  19456455 tcaagagaggtattggctatcaaaagataagaaatttctcagagttagtaagcagctgcaggatatatgaagaggatactaaggctcattacaagctggt 19456356  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||||||||||||||| |||| || |||||||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  19456355 gagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaag 19456256  T
Q  201 aggagagatgctcc 214  Q
    ||||||||| ||||    
T  19456255 aggagagatactcc 19456242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19466600 - 19466387
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||  ||||| ||||| |||||||||| |||||| || || || || ||||||||||||| |||||| ||||||||||||||||||||| || |    
T  19466600 tcaagagaggtattggctatcaaaagataagaaatttctcagagttagtaagcagctgcaggatatatgaagaggatactaaggctcattacaagctggt 19466501  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||||||||||||||| |||| || |||||||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  19466500 gagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaag 19466401  T
Q  201 aggagagatgctcc 214  Q
    ||||||||| ||||    
T  19466400 aggagagatactcc 19466387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19438434 - 19438221
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| ||||  || ||||| ||||| || ||||| ||||| | |||||| ||||| |||||| ||||||||||  |    
T  19438434 tcaagagagccattgggtatcagaagatcagaaacttttctgagttggtaagcagctgtaggatctatgaagaggatacgaaggcttattacaaggtagt 19438335  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||||||||| || |||| ||  || |||||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||    
T  19438334 gagtgaaaggagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaag 19438235  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  19438234 aggagagatgctcc 19438221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 73 - 214
Target Start/End: Original strand, 24515335 - 24515476
Alignment:
Q  73 aagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagca 172  Q
    ||||||| || |||||||||||||||||||||||  ||| ||| ||||||||||| |||| || |||||||||||||||||||||||||||| |||| ||    
T  24515335 aagatacgaaagctcattacaaggtgatgagtgaccgcagaggcaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggaaaaca 24515434  T
Q  173 gaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24515435 gaggctgaatgatgagaggaggcccaagaggagagatgctcc 24515476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 10465697 - 10465906
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || || |||||||||||||| ||| |||||||||| |||||||| ||||||||||||| ||| ||||| || || |||||||||||||||||    
T  10465697 tcaagagggctatagggtatcagaagattagagttttctctgagttggtgagcagctgcaggatatatgaggaagacacaaaagctcattacaaggtgat 10465796  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || ||| || || | ||||| |||||||||| |||||||||   |||||||||| ||||||||||||    
T  10465797 gagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctgacaagggaaagcagaaaatgaatgatgataggaggcccaag 10465896  T
Q  201 aggagagatg 210  Q
    ||||||||||    
T  10465897 aggagagatg 10465906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 14376765 - 14376978
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||| |||||||||||||||||| ||||  |||||||| ||||| |||||||||||||| | ||| || || || || |||||||||||||||||    
T  14376765 tcaagagagacattgggtatcagaagatcagaaacttctctgaattggttagtagctgcaggatctatgaggaggacacgaaagctcattacaaggtgat 14376864  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |   | |||||||| || |||| ||  || || ||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||     
T  14376865 gagtgatcgaaggagcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggaaaacagaggttgaatgatgagaggagacccaat 14376964  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  14376965 aggagagatgctcc 14376978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 18798122 - 18797909
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| || |||||||| ||||  |||||||| ||||| ||||||||||| || | |||||| || ||  | |||||||||||||||||    
T  18798122 tcaagagggctattggataccagaagatcagaaacttctctgagttggtaagtagctgcagaatctatgaagaggacacagaagctcattacaaggtgat 18798023  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||| |||||||| || |||| ||  || || ||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  18798022 gagtgaccgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcaaagattgaatgatgagaggaggcccaag 18797923  T
Q  201 aggagagatgctcc 214  Q
    ||||| ||||||||    
T  18797922 aggagggatgctcc 18797909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 25771253 - 25771063
Alignment:
Q  24 aagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggac 123  Q
    |||||||| | ||| ||||| ||||| || ||||| ||||| | |||||| ||||| || |||||||| |  |||||||||||| ||| |||||||||||    
T  25771253 aagataaggaatttttctgagttggtaagcagctgtaggatttatgaagaggatacaaaagctcattatagagtgatgagtgagcgcagaggtaagggac 25771154  T
Q  124 aacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||| |||| ||   |||| ||||||||||||||||||||  | || |||||||||||||||||||||||||| |||||||||||||||||    
T  25771153 aacagagtcgtccgtaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcc 25771063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21566840 - 21567053
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| || | ||| ||||| ||||| || ||||| || || | ||| |||||| | || |||||||||||||||||    
T  21566840 tcaagagggccattggctatcagaagatcaggactttttctgagttggtaagcagctgtagaatctatgaggaagattcaaaagctcattacaaggtgat 21566939  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |   ||||||||||||| |||| || ||| || || ||||| |||||||||||| |||||||  | |||||||||||||| |||||||||    
T  21566940 gagtgagcggaggagtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaag 21567039  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  21567040 aggagagatgctcc 21567053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15462768 - 15462662
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| || |||||||| || |||||||||||||| ||||| | ||| || ||||| || |||||||||||||||||    
T  15462768 tcaagagagccattggatatcagaagatcaggattttctcggagttggtgagtagctgtaggatttatgaggaggatacgaaagctcattacaaggtgat 15462669  T
Q  101 gagtgag 107  Q
    |||||||    
T  15462668 gagtgag 15462662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 34642434 - 34642626
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||| ||||| |||| | | ||||| ||| | ||||||||||| || | |||||||||| | | ||||||||||||||||||    
T  34642434 tcaagagggccattggctatcaaaagatcagaactctttctgagttgataagtagctgcagaatctatgaagaagattcaagggctcattacaaggtgat 34642533  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggag 193  Q
    ||||||  | |  || ||||||||||| |||| || ||| || ||||||||||||||||  ||| |||||||  | ||||||||||| |||||    
T  34642534 gagtgaacggaggggcaagggacaacagagtcgtcctaagccgtatagtgctcctgctggtaagggaaagcaacgactgaatgatgaaaggag 34642626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20010350 - 20010452
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| || || | ||| || ||||| ||||||||||| ||||||||    
T  20010350 tcaagagagccattggatatcagaagatcagaattttctcagaattggtgagtagctgtagaatttatgaggaggatacaaaggctcattataaggtgat 20010449  T
Q  101 gag 103  Q
    |||    
T  20010450 gag 20010452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24367832 - 24367620
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||| |||| ||| | |||| ||| ||||| |  || || || || | | ||||||| || || |||||||||||| | ||    
T  24367832 tcaagagagccattggatatcagcagatcagagtcttctatgagttggttaacaggtgtagaatctatcaagaagacaccaaagctcattacaagataat 24367733  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  24367732 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 24367633  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  24367632 aggagagatgctc 24367620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19881828 - 19881629
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| |||| | | || || ||| | ||||||||||| || | |||||||||| | ||||||||||||||||||||    
T  19881828 tcaagagggccattggttatcagaagatcagaactctttccgagttgataagtagctgcagaatctatgaagaagattcaaaggctcattacaaggtgat 19881729  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |  || |||| ||||||||||| || ||| || || || || |||||||  ||| |||||||  | |||||||||||||| || ||||||    
T  19881728 gagtgaacggaggggcaaggaacaacaaagtcgtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatgatgagagaagacccaag 19881629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 21474889 - 21474819
Alignment:
Q  144 tatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||||||||| | |||||||||||||||    
T  21474889 tatagtgctcctgctgacaagggtaagcagatgctgaatgatgagaggaggcctaggaggagagatgctcc 21474819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 18660306 - 18660148
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || ||||| || | ||| || ||||| || |||||||||||||   |||||||| | ||||||||| | || ||||||| ||  || || ||    
T  18660306 tggtgagcagttgcagaatctatgaggaggatacgaaagctcattacaaggctgtgagtgagaggaaaggtaagagtcagcaaagtcgtccaaagcctta 18660207  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagagga 204  Q
     |||||||||||||| ||| |  |||||||| | |||||||||||| | ||||||||||    
T  18660206 cagtgctcctgctgataagggtgagcagagggttaatgatgagaggggacccaagagga 18660148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 21474993 - 21474910
Alignment:
Q  24 aagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgag 107  Q
    |||||||| | ||| ||||| ||||| || ||||| ||||| | |||||| ||||| || |||||||| |||||||||||||||    
T  21474993 aagataaggaatttttctgaattggtaagcagctgtaggatttatgaagaggatacaaaagctcattataaggtgatgagtgag 21474910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 27205999 - 27205898
Alignment:
Q  53 tagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgct 152  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || ||||||||||| || |||| || ||| || || ||||||    
T  27205999 tagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgct 27205900  T
Q  153 cc 154  Q
    ||    
T  27205899 cc 27205898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 27243229 - 27243330
Alignment:
Q  53 tagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgct 152  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || ||||||||||| || |||| || ||| || || ||||||    
T  27243229 tagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgct 27243328  T
Q  153 cc 154  Q
    ||    
T  27243329 cc 27243330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 8720731 - 8720763
Alignment:
Q  178 tgaatgatgagaggaggcccaagaggagagatg 210  Q
    ||||||||||||||||||| |||||||||||||    
T  8720731 tgaatgatgagaggaggcctaagaggagagatg 8720763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 18404787 - 18404879
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    |||||||| ||||| || ||||||||  || ||||||||||  ||||||| || |||||||| | ||| || ||||| ||| |||||||||||    
T  18404787 aagagagcaattggttaccagaagatccgagttttctctgagctggtgagcagttgcaggatttatgaggaggataccaagactcattacaag 18404879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 21402 - 21200
Alignment:
Q  10 ccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtg 109  Q
    ||||||| |||||||||||||||| |||||| || ||||||||||||||||| |||| ||| |||||||  || |||||||||||||||||||||||| |    
T  21402 ccattggctatcagaagataagaaatttctccgagttggtgagtagctgcagaatatatgaggaagataggaaagctcattacaaggtgatgagtgagcg 21303  T
Q  110 caaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagat 209  Q
     ||||| ||||||||  | |||| || |||||| |||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  21302 taaaggcaagggacagtagagtcgtcctaaaccgtatagtgcccctgctgacaaaggaaaacagaggctgaatgatgagaggaggcccaagaggagagat 21203  T
Q  210 gct 212  Q
    |||    
T  21202 gct 21200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 194 - 407
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||| |  || || || || || |||||||| ||||||||    
T  194 tcaagagagccattggctatcagaagataagaatcttctctgatttggtgagtagttgtaggatctacgaggaggacaccaaagctcattataaggtgat 293  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||||||||||||||| ||||| | ||| || || ||||| |||||||||||| |||||||||   ||||||||||||||||||||||     
T  294 gagtgaacgaagaggtaagggacaacagagtcaccctaagccgtacagtgcccctgctgacaagggaaagcagatattgaatgatgagaggaggcccaat 393  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  394 aggagagatgctcc 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 19716261 - 19716474
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| |||| ||||||||| ||||| || ||||||||||||| ||| ||||| ||||| |||||||| ||||||||    
T  19716261 tcaagagagccattggctatcagaagattagaaatttctctgagttggtaagcagctgcaggatatatgaggaagacactaaagctcattataaggtgat 19716360  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || ||||||||| ||||| | || ||||||| ||||||||||  ||||||||||||||||||||||     
T  19716361 gagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttgacaagggaaagcagagattgaatgatgagaggaggcccaat 19716460  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  19716461 aggagagatgctcc 19716474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 19720824 - 19721037
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| |||| ||||||||| ||||| || ||||||||||||| ||| ||||| ||||| |||||||| ||||||||    
T  19720824 tcaagagagccattggctatcagaagattagaaatttctctgagttggtaagcagctgcaggatatatgaggaagacactaaagctcattataaggtgat 19720923  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || ||||||||| ||||| | || ||||||| ||||||||||  ||||||||||||||||||||||     
T  19720924 gagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttgacaagggaaagcagagattgaatgatgagaggaggcccaat 19721023  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  19721024 aggagagatgctcc 19721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 23274792 - 23274579
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||| |||||||  || ||||| ||||| || ||||| ||||| | |||||| ||||| ||||||||||||||||||||    
T  23274792 tcaagagggctattggttatcagaaaataagaaacttttctgagttggtaagcagctgtaggatctatgaagaggatacgaaggctcattacaaggtgat 23274693  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |  || ||||||||||| |||| ||  || |  ||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||    
T  23274692 gagtgaacgtaggggcaagggacaacagagtcgtccgaagcagtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaag 23274593  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  23274592 aggagagatgctcc 23274579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 23097262 - 23097475
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| ||| |||| ||||||||||| |||| ||| ||||| || || ||||||||||| || |  || |||||| | || |||||||||||||||||    
T  23097262 tcaagagggcctttggctatcagaagatcagaactttttctgagtttgtaagtagctgcagaatctacgaggaagattcaaaagctcattacaaggtgat 23097361  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||| | ||| || ||||  | ||| || || ||||| |||||||||||| |||||||  | ||||||||||||||||||||||||    
T  23097362 gagtgagcggagaggtaaagcacatcagagtctccctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagaggaggcccaag 23097461  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  23097462 aggagagatgctcc 23097475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 12577552 - 12577357
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||  |||| |||||||| ||||||||||||||| |||| ||||| |  || || || || || |||||||| || |||||    
T  12577552 tcaagagagccataggataccaacagattagaattttttctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaagtgat 12577453  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| | | |||||||||||| || | || || |||||| |||||||| || ||||||||| | |||||||| || |||||||||||||||||    
T  12577452 gagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggctgacaagggtaagcagagacttaatgatgagaggaggcc 12577357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 20848785 - 20848574
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||| ||||| |||||  |||| ||||| || ||||| ||||| |  || ||||| || | ||||||||| || || |||||||| ||| | ||    
T  20848785 tcaagagagctattggatatcaacagatcagaatcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattat 20848686  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||   |||||    
T  20848685 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgatagga--tccaag 20848588  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  20848587 aggagagatgctcc 20848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 10872005 - 10871887
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaac 141  Q
    |||||||| | |||||||||||| |  ||||| ||||| |||||||| ||||||||  ||| |||| | || |||||||||||||| |||| || ||| |    
T  10872005 gatttggttaatagctgcaggatctacgaagaggataccaaggctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtcgtcctaagc 10871906  T
Q  142 catatagtgctcctgctga 160  Q
    | || ||||| ||||||||    
T  10871905 cgtacagtgcccctgctga 10871887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 23029927 - 23029866
Alignment:
Q  34 ttttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    ||||||| || ||||||||||| |||||||| | ||| || || ||||||||||||||||||    
T  23029927 ttttctccgagttggtgagtagttgcaggatttatgaggaggacactaaggctcattacaag 23029866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22742210 - 22742306
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    ||||||| || ||||| || ||||||||  || ||||||| ||  ||||||| || |||||||| |  ||||| ||||| |||||||||||||||||    
T  22742210 tcaagagggcaattggttaccagaagatccgagttttctccgagctggtgagcagttgcaggatttacgaagaggataccaaggctcattacaaggt 22742306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 522 - 735
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||||| |||||||||||||| | ||| |||||||| || |||||||||||||||||    
T  522 tcaagagagccattggttatcagaaaataagaaacttctctgatttggtaagtagctgcaggatttctgaggaagataccaaagctcattacaaggtgat 621  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||    | ||| |||||||| ||||||| ||  || || |||||||||||||| |||||| | ||||||||| | |||||||||||||||||||||    
T  622 gagtgaacatagaggcaagggacagcaaagtcgtccgaagccgtatagtgctcctgccgacaaggggaagcagaggttaaatgatgagaggaggcccaag 721  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  722 aggagagatgctcc 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 5609 - 5822
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||| |||| ||  |||||||||||||| || ||||| ||||| | |||||||||||| || |||||||||||||||||    
T  5609 tcaagagggctattggttatcagaaaataataaacttctctgatttggtaagcagctgtaggatctatgaagaagatacgaaagctcattacaaggtgat 5708  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| |||||||| || |||||||  || || ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  5709 gagtgagcgtagaggcaagggacagcagagtcatccgaagccgtatagtgctcctgctgacaagggtaagcagagactgaatgatgagaggaggcccaag 5808  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  5809 aggagagatgctcc 5822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 164108 - 164321
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||| ||  | || || |||||||||||||||||    
T  164108 tcaagagagccattgggtatcagaagatcagaattttctccgagttggtgagtagctgcaggatatatgaggagaacacgaaagctcattacaaggtgat 164207  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||| ||||| || |||| || |||| |||| ||||| |||||||||||| |||| |||||| ||||||||||||||||||||||     
T  164208 gagtgaacgaagaggtaaaggacagcagagtcgtcctaaatcatacagtgcccctgctgacaagggaaaacagaggttgaatgatgagaggaggcccaat 164307  T
Q  201 aggagagatgctcc 214  Q
    |||||||| |||||    
T  164308 aggagagacgctcc 164321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 3e-53; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 21929062 - 21928849
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||||||||||| ||| ||||| ||||| || ||||| || || | |||||| ||||| || |||||||||||||||||    
T  21929062 tcaagagggctattggttatcagaagataagaaatttttctgaattggtaagcagctgtagaatctatgaagaggataccaaagctcattacaaggtgat 21928963  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||||||||||||||| |||| || |||||| ||||||||||||||||||||  |||| |||||||||||||||||||||||||| | |    
T  21928962 gagtgagcgtagaggtaagggacaacagagtcgtcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcctagg 21928863  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  21928862 aggagagatgctcc 21928849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31413679 - 31413892
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||||||||| | |||||||||| | ||||| |  ||||||||||||| ||| ||||| || || |||||||||||  ||||    
T  31413679 tcaaaagagctattgggtatcagaagattaaaattttctctaagttggtaaacagctgcaggatatatgaggaagacaccaaagctcattacaaaatgat 31413778  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || |||||| || || || |||||||||||| ||||||||||  |||||||||||||||||||||||    
T  31413779 gagtgagcgaaggggtaagggacagcagagtcgtcctaaaccttacagcgcccctgctgacaagggaaagcagagaatgaatgatgagaggaggcccaag 31413878  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  31413879 aggagagatgctcc 31413892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22027427 - 22027640
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||||||  |||| |||||||||||||||||||| ||| | |||||||| | ||| || || || || | |||||| ||||||||    
T  22027427 tcaagagagccatagggtatcaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacacaaaagatcattataaggtgat 22027526  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || |||||| || ||||| |||||||||||| ||||||| ||  ||||||||||||||||||||||     
T  22027527 gagtgagcgaagtggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagattgaatgatgagaggaggcccaat 22027626  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  22027627 aggagagatgctcc 22027640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 29300573 - 29300782
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||||||||| ||| |||||||||| || || || ||||||||||||| ||| || || || || |||||||||||||| ||    
T  29300573 tcaaaagagctattgggtatcagaagattagagttttctctgagttagtaagcagctgcaggatatatgaggaggacacaaaagctcattacaaggtaat 29300672  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||  | |||| || |||||| || |||||||||||||||||  | ||||||| | |||||||||| ||||||||||||    
T  29300673 gagtgagaggaggggtaagggacattagagtcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaagatgaatgatgataggaggcccaag 29300772  T
Q  201 aggagagatg 210  Q
    ||| ||||||    
T  29300773 aggggagatg 29300782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 22054497 - 22054286
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||  |||| |||||||||||||||||||||||| | |||||||| ||||| || || || || |||||||| ||||||||    
T  22054497 tcaagagagccataggataccaacagattagaattttctctgatttggtgagtcgttgcaggatctgtgaggaggacaccaaagctcattataaggtgat 22054398  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||  || |||| || ||| || || ||||| |||||||| ||| | |||||||| || ||||||||||||||||| ||     
T  22054397 gagtgagcgaagaggtaagggacggcagagtcgtcctaagccgtacagtgcccctgctgataagggtaagcagagacttaatgatgagaggaggccgaat 22054298  T
Q  201 aggagagatgct 212  Q
    ||||||||||||    
T  22054297 aggagagatgct 22054286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 19985806 - 19985601
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagt 108  Q
    |||||||| ||||| ||||||| || ||| ||||||||||| || || || ||||||| |||||| ||||| || ||||||||||||||||||||||||     
T  19985806 gccattggttatcaaaagataataaatttttctgatttggtaagcagttgtaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagc 19985707  T
Q  109 gcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagaga 208  Q
    |||  || |||||| | || |||| ||  || || |||||||| ||||| |||||| | || |||||| ||| ||||||||||||||| |||||||||||    
T  19985706 gcagtggcaagggatagcagagtcgtccgaagccgtatagtgcccctgcggacaagggtaaacagaggatgattgatgagaggaggcctaagaggagaga 19985607  T
Q  209 tgctcc 214  Q
    ||||||    
T  19985606 tgctcc 19985601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28984545 - 28984332
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||||||||| |||||  |||| ||| | || ||||| ||||| |  || || ||||| | ||||||||| || || |||||||||||| | ||    
T  28984545 tcaaaagagccattggatatcaacagatcagagtcttttctgagttggttaacaggtgtaggatttatgaagaagacaccaaagctcattacaagattat 28984446  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || ||||||||||| |||||| ||||||||||| ||  |||||| ||||||||||||    
T  28984445 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaagggaaagcagaggatgggtgatgataggaggcccaag 28984346  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  28984345 aggagagatgctcc 28984332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 22374480 - 22374290
Alignment:
Q  24 aagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggac 123  Q
    |||||||| | ||| |||||||||||||||||||| ||||| | | | || ||||| || |||||||| ||||||||||||||| ||| |||||||||||    
T  22374480 aagataaggaatttttctgatttggtgagtagctgtaggatctatcaggaggatacaaaagctcattataaggtgatgagtgagcgcagaggtaagggac 22374381  T
Q  124 aacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |  | |||| ||  ||||| |||||||| ||||||| |||  | || || || || ||||| ||||||||||| | |||||||||| ||||    
T  22374380 agtagagtcgtccgaaaccgtatagtgcccctgctgtcaaaggtaaacaaagacttaatgaggagaggaggcctaggaggagagattctcc 22374290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 16268382 - 16268584
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    |||||||||||| |||| ||| | |||||||| ||||| | ||| || || || | ||||||||| || || |||||||||||  | ||||||||| | |    
T  16268382 attgggtatcagcagatcagagtcttctctgagttggttaatagttgtagaatttatgaagaagacaccaaagctcattacaatataatgagtgagagga 16268481  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
      |||||||||||||| | || || ||| || || ||||||| |||||||||  ||||||||| | ||| |||||| |||||||| |||| |||||||||    
T  16268482 ggggtaagggacaacagaatcgtcctaagccttacagtgctcttgctgacaaaggaaagcagaagatgagtgatgacaggaggcctaagaagagagatgc 16268581  T
Q  212 tcc 214  Q
    |||    
T  16268582 tcc 16268584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21970698 - 21970761
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggat 64  Q
    |||||||||||||||| ||||||||||| ||||  || ||||| |||||||||||||| |||||    
T  21970698 tcaagagagccattggttatcagaagattagaaacttttctgagttggtgagtagctgtaggat 21970761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22004228 - 22004323
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaagg 96  Q
    |||||||||||||||| ||||||||||| | ||  || ||| | |||||||||||||| ||||| | |||||| ||||| || |||||||| ||||    
T  22004228 tcaagagagccattggttatcagaagattataaacttttctaagttggtgagtagctgtaggatttatgaagatgataccaaagctcattataagg 22004323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 15536984 - 15536921
Alignment:
Q  34 ttttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    ||||| ||||||| |||| |||||||||||| |  || ||||||| ||||||||||||||||||    
T  15536984 ttttccctgatttagtgaatagctgcaggatctacgaggaagatagtaaggctcattacaaggt 15536921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 22117366 - 22117456
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtc 132  Q
    |||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || || |||||||| |||||||    
T  22117366 gatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcaaagtc 22117456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 22990634 - 22990520
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || |||||||| | ||| |||||||||||||||||||||||| |  ||| |||| | ||||| || || || ||||||| ||  || || ||    
T  22990634 tggtgagcagttgcaggatttatgaggaagatactaaggctcattacaagattgtgaatgagcggaaaggcaaaggtcagcaaagtcgtccaaagcctta 22990535  T
Q  146 tagtgctcctgctga 160  Q
     ||||||||||||||    
T  22990534 cagtgctcctgctga 22990520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 3e-53; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15267344 - 15267131
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||| | |||||||||||||| | ||| || || || || |||||||||||||||||    
T  15267344 tcaagagagccattggttatcagaaaataagaaacttctctgatttgataagtagctgcaggatttatgaggaggacacgaaagctcattacaaggtgat 15267245  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||| ||||||||||| |||| ||  || || ||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||    
T  15267244 gagtgaacgcagaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaag 15267145  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  15267144 aggagagatgctcc 15267131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 14993086 - 14993284
Alignment:
Q  16 ggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaagg 115  Q
    ||||||||||||||||||  || ||||||||||| ||||| ||||| || | |||||| ||||  || |||||||||||||||||||||||| | | |||    
T  14993086 ggtatcagaagataagaaacttttctgatttggtaagtagttgcagaatttatgaagaggatatgaaagctcattacaaggtgatgagtgagcgtagagg 14993185  T
Q  116 taagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
     ||||||||||| |||| ||| || || |||||||| |||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||    
T  14993186 caagggacaacagagtcgtctgaagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagatgctcc 14993284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 18260009 - 18259796
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||  |||| |||||||  ||||||||||| || ||||||| |||||| | |||||||||||| ||  ||||||||||||||||    
T  18260009 tcaagagggctattggttactagaaaataagaaacttctctgatttagtaagtagctacaggatctatgaagaagatacaaaatctcattacaaggtgat 18259910  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  || |||||||| || |||||||  || || ||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||    
T  18259909 gagtgagcgtaggggcaagggacagcagagtcatccgaagccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaag 18259810  T
Q  201 aggagagatgctcc 214  Q
    |||| |||||||||    
T  18259809 aggacagatgctcc 18259796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 15073904 - 15073714
Alignment:
Q  24 aagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggac 123  Q
    |||||||| | ||| |||||||||||||||||||| ||||| | |||||| ||||| || |||||||| ||||||||||||||| | | |||||||||||    
T  15073904 aagataaggaatttttctgatttggtgagtagctgtaggatctatgaagaggatacaaaagctcattataaggtgatgagtgagcgtagaggtaagggac 15073805  T
Q  124 aacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    | |  |||| ||  ||||| ||||||||||||||||||||    || ||||| |||||||||||||||||||| | |||||||||||||||    
T  15073804 agctgagtcgtccgaaaccgtatagtgctcctgctgacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcc 15073714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 16151204 - 16150991
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| |  |  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||||||||||||    
T  16151204 tcaagagagccattgggtatcagaagatcatgaacttctctgaattggtaagtagctgcagaatctatgaggaggacacaaaagctcattacaaggtgat 16151105  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |  || || ||||| || |||| ||  || || |||||||||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  16151104 gagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgacaaaggaaagcagaagttgaatgatgagaggaggcccaag 16151005  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  16151004 aggagagatgctcc 16150991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 16155350 - 16155137
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| |  |  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||||||||||||    
T  16155350 tcaagagagccattgggtatcagaagatcatgaacttctctgaattggtaagtagctgcagaatctatgaggaggacacaaaagctcattacaaggtgat 16155251  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |  || || ||||| || |||| ||  || || |||||||||||| |||||||  ||||||||| | |||||||||||||||||||||||    
T  16155250 gagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgacaaaggaaagcagaagttgaatgatgagaggaggcccaag 16155151  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  16155150 aggagagatgctcc 16155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 3261498 - 3261711
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  3261498 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaagataat 3261597  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  3261598 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 3261697  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  3261698 aggagagatgctcc 3261711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11203936 - 11204149
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||| | ||    
T  11203936 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagatgtagaatttatgaagaagacaccaaagctcattacaagataat 11204035  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || ||||||||||||||||||||  ||||| ||| | |||||||||| ||||| ||||||    
T  11204036 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagtagaagatgaatgatgataggagacccaag 11204135  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  11204136 aggagagatgctcc 11204149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 20893597 - 20893386
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||| |||||||||||| |||| ||| | || ||||| ||||| |  || |||||||| |   ||||||| || || |||||||||||| | ||||    
T  20893597 aagagagctattgggtatcagcagatcagagtcttttctgagttggtaaacagttgcaggatttacaaagaagacaccaaagctcattacaagataatga 20893498  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    ||||| | |  || |||||||| || |||| || ||| || || |||||||||||||||||  ||||||||| | |||||||||| |||||||| |||||    
T  20893497 gtgagaggaggggcaagggacagcagagtcgtcctaagccttaaagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaagag 20893398  T
Q  203 gagagatgctcc 214  Q
    ||||||||||||    
T  20893397 gagagatgctcc 20893386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 51603496 - 51603691
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||| |||| |||||||||||||||||||||||| |||| ||||| |  || || || || || |||||||| || |||||    
T  51603496 tcaagagagccataggataccagcagattagaattttctctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaagtgat 51603595  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| | | |||||||||||| || | || || |||||| |||||||| ||  |||| ||| | |||||||| || |||||||||||||||||    
T  51603596 gagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggcc 51603691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 53750174 - 53750369
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||| |||| |||||||||||||||||||||||| |||| ||||| |  || || || || || |||||||| || |||||    
T  53750174 tcaagagagccataggataccagcagattagaattttctctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaagtgat 53750273  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    ||||||| | | |||||||||||| || | || || |||||| |||||||| ||  |||| ||| | |||||||| || |||||||||||||||||    
T  53750274 gagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggcc 53750369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7357835 - 7357622
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||  |||| ||| | || ||||| ||||| |  || || ||||| | ||||||||| || ||||||||||||||| | ||    
T  7357835 tcaaaagagctattgggtatcaacagatcagagtcttttctgagttggttaacaggtgtaggatttatgaagaagacaccaaggctcattacaagataat 7357736  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || | |||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  7357735 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 7357636  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  7357635 aggagagatgctcc 7357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 44658570 - 44658783
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||| | ||    
T  44658570 tcaagagagccattggatatcagcagatcagagtcttctctgagttggttaacaggtgtagaatctatgaagaagacaccaaagctcattacaagataat 44658669  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || ||||||||||| |||||  ||||||||| | ||  | |||| ||||||||||||    
T  44658670 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaaaggaaagcagaagatgggtcatgataggaggcccaag 44658769  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  44658770 aggagagatgctcc 44658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 29450308 - 29450454
Alignment:
Q  68 tgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcga 167  Q
    ||||||||| || || |||||||| ||| | ||||||||| | |  |||||||||||||| | || || |||||| || |||||||||||||||||  ||    
T  29450308 tgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaagga 29450407  T
Q  168 aagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    ||||||| | ||  |||||| |||||||| |||||||||||||||||    
T  29450408 aagcagaagatgggtgatgataggaggcctaagaggagagatgctcc 29450454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27903952 - 27903851
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||| | ||| | ||| || ||||| |||||||| || ||||||||    
T  27903952 tcaagagagtcat-gggtatcagaagatcagaaatttctctgaattggtgagtagctgtaagatttatgaggaggatacaaaggctcactataaggtgat 27903854  T
Q  101 gag 103  Q
    |||    
T  27903853 gag 27903851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 16248153 - 16248216
Alignment:
Q  34 ttttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    ||||| |||||||||| | |||||||||||| | | | || |||||||||||||||||||||||    
T  16248153 ttttccctgatttggttaatagctgcaggatctataaggaggatactaaggctcattacaaggt 16248216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 14300467 - 14300585
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaac 141  Q
    |||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || || |||||||| || |||| || ||| |    
T  14300467 gatttggtcaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagc 14300566  T
Q  142 catatagtgctcctgctga 160  Q
    | || ||||| ||||||||    
T  14300567 cgtacagtgcccctgctga 14300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 14697595 - 14697474
Alignment:
Q  75 gatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcaga 174  Q
    ||||| || ||||||||||| ||  ||| |||| | ||||| ||||| || ||||||| ||  || || || |||||||||||||| ||| | ||||| |    
T  14697595 gataccaaagctcattacaaagttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaa 14697496  T
Q  175 ggctgaatgatgagaggaggcc 196  Q
    |  |||||||||||||||||||    
T  14697495 gattgaatgatgagaggaggcc 14697474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 590 - 803
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| | ||||| ||||||||||||||| |||||||||||||| | ||| || || |  || |||||||||||||||||    
T  590 tcaagagagccattggttatcagaaaaaaagaaatttctctgatttggtaagtagctgcaggatttatgaggaggacaacaaagctcattacaaggtgat 689  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||||||||||||||| |||| ||  || || |||| |||||||||||||||| | ||| ||||| | |||||||||||||||||||||    
T  690 gagtgaacgcagaggtaagggacaacagagtcgtccgaagccgtataatgctcctgctgacaagggtaagaagaggttaaatgatgagaggaggcccaag 789  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  790 aggagagatgctcc 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 8e-51; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 23077791 - 23078004
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||||||||||||||| |||||||||||||| ||||| || ||||||||||||| ||| ||||| || || |||||||||||||| ||    
T  23077791 tcaaaagagctattgggtatcagaagattagaattttctctgagttggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtaat 23077890  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || |||| || |||||| || |||||||||||||||||  | ||||||| | |||||||||| ||||||||||||    
T  23077891 gagtgagaggaggggtaagggacagcagagtcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaagatgaatgatgataggaggcccaag 23077990  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  23077991 aggagagatgctcc 23078004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21870164 - 21870377
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| |  || ||||| ||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||    
T  21870164 tcaagagggctattggctatcaaaagataaggaacttttctgaattggtaagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgat 21870263  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| |||||||| || |||| ||  || || |||||||| |||||||||||| | |||||||   ||||||||| ||||||||| |||    
T  21870264 gagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagaaattgaatgatgggaggaggcctaag 21870363  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  21870364 aggagagatgctcc 21870377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21874444 - 21874657
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| |  || ||||| ||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||    
T  21874444 tcaagagggctattggctatcaaaagataaggaacttttctgaattggtaagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgat 21874543  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| |||||||| || |||| ||  || || |||||||| |||||||||||| | |||||||   ||||||||| ||||||||| |||    
T  21874544 gagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagaaattgaatgatgggaggaggcctaag 21874643  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  21874644 aggagagatgctcc 21874657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 23563054 - 23563267
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| |||| ||||| | ||||||| |||||||||||||| | ||| || || ||||| |||||||||||| ||||    
T  23563054 tcaagagagccattggttatcagaagattagaaatttctttaatttggtaagtagctgcaggatttatgaggaggacactaaagctcattacaagatgat 23563153  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||||||||||||  | |||  ||  || || ||||||||||||||||| |||   ||||||||| | ||| |||||||||||||||||    
T  23563154 gagtgaacgtagaggtaagggacagaagagttgtccgaagccgtatagtgctcctgctgaaaaggataagcagaggttaaataatgagaggaggcccaag 23563253  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  23563254 aggagagatgctcc 23563267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25851554 - 25851342
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| |||||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||||||| | ||    
T  25851554 tcaaaagagctattgggtatcagcagatcagagttttctctgagttggttaataggtgcagaatttatgaagaagacaccaaagctcattacaagataat 25851455  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  25851454 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 25851355  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  25851354 aggagagatgctc 25851342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 14883888 - 14884090
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||| ||| | ||||||||| | |    
T  14883888 attgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataagattatgagtgagagga 14883987  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
      |||||||||||||| | || || ||| || || ||||||||| |||||||  ||||||||||| ||  |||||| |||||||||||||||||||||||    
T  14883988 ggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcagaggatgggtgatgataggaggcccaagaggagagatgc 14884087  T
Q  212 tcc 214  Q
    |||    
T  14884088 tcc 14884090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 17266244 - 17266415
Alignment:
Q  25 agataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggaca 124  Q
    |||| |||||||||||||||||||| ||| |||| ||||| |  || || || || || |||||||| ||||||||||||||| | | |||||| || ||    
T  17266244 agattagaattttctctgatttggtaagtcgctgtaggatctacgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaaagggca 17266343  T
Q  125 acaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     || |||| || |||||| |||||||| |||||||||||| | |||||||| || |||||||||||||||||    
T  17266344 tcagagtcgtcctaaaccgtatagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggcc 17266415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 20345764 - 20345551
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | || ||||| ||||| | ||| ||||| || | ||| ||||| || || |||||||||||| | ||    
T  20345764 tcaaaagagctattgggtatcagcagatcagagtcttttctgagttggttaataggtgcagaatttatgaggaagacaccaaagctcattacaagataat 20345665  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||  | | || || ||| || ||||||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  20345664 gagtgagaggaggggtaagggacagtagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 20345565  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  20345564 aggagagatgctcc 20345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 20824933 - 20824833
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || |  || || ||||| ||| ||||||||||||||||||    
T  20824933 aagagagccattgggtatcagaagatcagaattttctcagaattggtgagtagctgcagaatttacgaggaggatacgaagactcattacaaggtgatga 20824834  T
Q  103 g 103  Q
    |    
T  20824833 g 20824833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28891828 - 28891934
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| |||||||| || ||||||||||| ||||||||||| || ||||||||| ||||||| || | ||| || ||||| ||||||||||||||||||||    
T  28891828 tcaaaagagccataggatatcagaagatcagaattttctcagaattggtgagttgctgcagaatttatgaggaggatacgaaggctcattacaaggtgat 28891927  T
Q  101 gagtgag 107  Q
    |||||||    
T  28891928 gagtgag 28891934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 22506161 - 22505948
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||||| |||||| | || ||| | |||||||| ||||| |  || ||||| || | ||||||||| || || |||||||| ||| | ||    
T  22506161 tcaaaagagctattggatatcagcaaatcagagtcttctctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagataat 22506062  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||||||| | |||||||||| |||||||| |||    
T  22506061 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaag 22505962  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  22505961 aggagagatgctcc 22505948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 23474656 - 23474497
Alignment:
Q  39 tctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatctta 138  Q
    ||||| |||||||| |||||||| |||  ||| ||||||||||||||||||||||||||  ||| |||| | ||||| ||||| || ||||||| ||  |    
T  23474656 tctgagttggtgagcagctgcagaatacatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaa 23474557  T
Q  139 aaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggccca 198  Q
    | || || | |||||||||||| ||| | ||||| ||  |||||||||||||||||||||    
T  23474556 agccttacattgctcctgctgataagggtaagcaaagattgaatgatgagaggaggccca 23474497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22465432 - 22465330
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| | |||||||||  | |||||||||||||| || || | ||| || ||||| ||||||||||| ||||||||    
T  22465432 tcaagagagccattggatatcagaagatcataattttctcataattggtgagtagctgtagaatttatgaggaggatacaaaggctcattataaggtgat 22465333  T
Q  101 gag 103  Q
    |||    
T  22465332 gag 22465330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28911674 - 28911734
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcag 61  Q
    |||| |||||||| || ||||||||||| ||||||||||| || |||||||||||||||||    
T  28911674 tcaaaagagccataggatatcagaagatcagaattttctcagaattggtgagtagctgcag 28911734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28926942 - 28927002
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcag 61  Q
    |||| |||||||| || ||||||||||| ||||||||||| || |||||||||||||||||    
T  28926942 tcaaaagagccataggatatcagaagatcagaattttctcagaattggtgagtagctgcag 28927002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20770620 - 20770518
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||| |||| || ||||||||||| ||||||||||| || |||||||| ||||| || || | ||| || ||||| |||||||| || ||||||||    
T  20770620 tcaaaagatccataggatatcagaagatcagaattttctcggaattggtgaggagctgtagaatttatgaggaggatacaaaggctcactataaggtgat 20770521  T
Q  101 gag 103  Q
    |||    
T  20770520 gag 20770518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 21410590 - 21410437
Alignment:
Q  45 ttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccat 144  Q
    ||||||||||||||||| || | |||||| || || || |||||||| ||| | |||| |||| | |  ||||||   |||||||||| |  |||||| |    
T  21410590 ttggtgagtagctgcagaatttatgaagatgacaccaaagctcattataagattatgaatgagcggaggggtaagcaccaacaaagtcgtggtaaacctt 21410491  T
Q  145 atagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggccca 198  Q
    | |||||||| ||||| ||| | ||||| ||| |||||||| ||||||||||||    
T  21410490 acagtgctccagctgataagggtaagcatagggtgaatgataagaggaggccca 21410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 27521862 - 27521741
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaac 141  Q
    |||||||| | |||||||||||| | |||||| || || |||||||| ||||||||  ||| |||| | || ||||||||||| || |||| || ||| |    
T  27521862 gatttggttaatagctgcaggatctatgaagaggacacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagc 27521763  T
Q  142 catatagtgctcctgctgacaa 163  Q
    | || ||||| |||||||||||    
T  27521762 cgtacagtgcccctgctgacaa 27521741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 23669968 - 23669901
Alignment:
Q  147 agtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||||||||| ||||||  || |||| ||  |||||||||||||||| || |||||||||||||||||    
T  23669968 agtgctcctgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgctcc 23669901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20779395 - 20779293
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||| |||| || ||||||||||| ||||||||||| || ||| |||| ||||| || || | ||| || ||||| |||||||| || ||||||||    
T  20779395 tcaaaagatccataggatatcagaagatcagaattttctcggaattgttgagcagctgtagaatttatgaggaggatacaaaggctcactataaggtgat 20779296  T
Q  101 gag 103  Q
    |||    
T  20779295 gag 20779293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 22138124 - 22138078
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| | |||||||||||| | |||||||||||||||||||||    
T  22138124 gatttggtcaatagctgcaggatctatgaagaagatactaaggctca 22138078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 22329817 - 22329935
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaac 141  Q
    |||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||  ||| |||| | || || |||||||| || |||| || ||| |    
T  22329817 gatttggtcaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagc 22329916  T
Q  142 catatagtgctcctgctga 160  Q
    | || ||||| ||||||||    
T  22329917 cgtacagtgcccctgctga 22329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 16257924 - 16258009
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| |||||||||||| |||| ||| | || || || ||||||| |||||||||||||| ||| || ||||| || |||||    
T  16257924 aagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctca 16258009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 22351375 - 22351322
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    |||||||| | |||||||||||| | |||||| |||||||||||||| ||||||    
T  22351375 gatttggttaatagctgcaggatctatgaagaggatactaaggctcactacaag 22351322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 22591643 - 22591728
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| |||||||||||| |||| ||| | || || || ||||||| |||||||||||||| ||| || ||||| || |||||    
T  22591643 aagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctca 22591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 22595198 - 22595283
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| |||||||||||| |||| ||| | || || || ||||||| |||||||||||||| ||| || ||||| || |||||    
T  22595198 aagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctca 22595283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1018 - 1231
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||  ||| |||||||  |||||||||||||| || ||||| ||||| | |||||| ||||| || |||||||||||||||||    
T  1018 tcaagagggctattggttattcgaaaataagaaacttctctgatttggtaagcagctgtaggatctatgaagaggatacgaaagctcattacaaggtgat 1117  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| ||||||||||| |||| ||  || ||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  1118 gagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgctgacaagggtaaacagaggctgaatgatgagaggaggcccaag 1217  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  1218 aggagagatgctcc 1231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 987 - 1192
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagt 108  Q
    |||||||| || || |||||||| | ||||||||||||||||||||||||||| |||| ||| || || || || |||||||| |||||||||||||||     
T  987 gccattggttaccaaaagataaggaatttctctgatttggtgagtagctgcagaatatatgaggaggacacaaaagctcattataaggtgatgagtgagc 1086  T
Q  109 gcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagaga 208  Q
    ||| |||||||||||| || |||| ||  ||||| ||||||||||||| ||||||| | |||||||| |||||||||||||||||||| | |||||||||    
T  1087 gcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgttgacaagggtaagcagagactgaatgatgagaggaggcctaggaggagaga 1186  T
Q  209 tgctcc 214  Q
    ||||||    
T  1187 tgctcc 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 8341 - 8128
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||  ||| |||||||  |||||||||||||| || ||||| ||||| | |||||| ||||| || |||||||||||||||||    
T  8341 tcaagagggctattggttattcgaaaataagaaacttctctgatttggtaagcagctgtaggatctatgaagaggatacgaaagctcattacaaggtgat 8242  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| ||||||||||| |||| ||  || ||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  8241 gagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgctgacaagggtaaacagaggctgaatgatgagaggaggcccaag 8142  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  8141 aggagagatgctcc 8128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 28000 - 28205
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagt 108  Q
    |||||||| || || |||||||| | ||||||||||||||||||||||||||| |||| ||| || || || || |||||||| |||||||||||||||     
T  28000 gccattggttaccaaaagataaggaatttctctgatttggtgagtagctgcagaatatatgaggaggacacaaaagctcattataaggtgatgagtgagc 28099  T
Q  109 gcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagaga 208  Q
    ||| |||||||||||| || |||| ||  ||||| ||||||||||||| ||||||| | |||||||| |||||||||||||||||||| | |||||||||    
T  28100 gcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgttgacaagggtaagcagagactgaatgatgagaggaggcctaggaggagaga 28199  T
Q  209 tgctcc 214  Q
    ||||||    
T  28200 tgctcc 28205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15669 - 15456
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||| || | ||| || || || || |||||||||||||||||    
T  15669 tcaagagagccattgggtatcagaagatcagaaatttctctgaattggtaagtagctgcagaatctatgaggaggaaacgaaagctcattacaaggtgat 15570  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |   | || |||||||| |||| ||  || || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||     
T  15569 gagtgatcgaatgagcaaaggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagcgaaagcagaggttaaatgatgagaggaggcccaat 15470  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  15469 aggagagatgctcc 15456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 6663 - 6513
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || || || |||| ||| ||||||||||||| ||||||||||||  ||| |||| | ||||  ||||| |||||||||  ||  ||||| ||    
T  6663 tggtgagaagttgtagaatatatgaggaagatactaaggatcattacaaggttgtgaatgagcggaaagtcaagggtcaacaaagttgtccaaaacctta 6564  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||||||| ||||| ||| | || || ||  | |||||||||||||||||    
T  6563 cagtgctccggctgataagggcaaacaaagaattaatgatgagaggaggcc 6513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 70705 - 70492
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||||||||||| ||| ||||| ||||| || ||||| || || | |||||| ||||| || |||||||| || |||||    
T  70705 tcaagagggctattggttatcagaagataagaaatttttctgaattggtaagcagctgtagaatctatgaagaggataccaaagctcattataaagtgat 70606  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||||||||||||||| |||| ||  ||||| ||||||||||||||||||||  | || |||||||||||||||||||||||||| |||    
T  70605 gagtgagcgcagaggtaagggacaacagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaag 70506  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  70505 aggagagatgctcc 70492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 98290 - 98503
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| ||||  || ||||| ||||| || ||||| |||||   |||||| ||||| ||||||||||||||||| ||    
T  98290 tcaagagagccattgggtatcagaagatcagaaacttttctgagttggtaagcagctgtaggatcaatgaagaggatacgaaggctcattacaaggtaat 98389  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||||||||||||||| |||| ||  || ||||||||||||| |||||||||| | ||||||||| | |||||||||||||||||||||    
T  98390 gagtgaaaggagaggtaagggacaacagagtcgtccgaagccatatagtgctcatgctgacaagggtaagcagaggttaaatgatgagaggaggcccaag 98489  T
Q  201 aggagagatgctcc 214  Q
     |||||||||||||    
T  98490 tggagagatgctcc 98503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 176544 - 176371
Alignment:
Q  41 tgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaa 140  Q
    |||||||||||||||||| ||||| | |||||| ||||| || |||||||| ||||||||||||||| | | |||||||||||| || |||| ||  |||    
T  176544 tgatttggtgagtagctgtaggatctatgaagaggatacaaaagctcattataaggtgatgagtgagcgtagaggtaagggacagcagagtcgtccgaaa 176445  T
Q  141 ccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    || ||||||||||||||  ||||    || ||||| |||||||||||||||||||| | |||||||||||||||    
T  176444 ccgtatagtgctcctgccaacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcc 176371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 97; Significance: 7e-48; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8169 - 8381
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| | ||  |||||||| ||||| ||| ||||||| || | ||| || || |  || |||||||||||||||||    
T  8169 tcaagagagccattgggtatcagaagatcaaaaacttctctgaattggtaagttgctgcagaatctatgaggaggacatgaaagctcattacaaggtgat 8268  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  |||  || ||||||||||| |||| ||  || || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  8269 gagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaag 8368  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  8369 aggagagatgctc 8381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 18383 - 18595
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| | ||  |||||||| ||||| ||| ||||||| || | ||| || || |  || |||||||||||||||||    
T  18383 tcaagagagccattgggtatcagaagatcaaaaacttctctgaattggtaagttgctgcagaatctatgaggaggacatgaaagctcattacaaggtgat 18482  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  |||  || ||||||||||| |||| ||  || || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  18483 gagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaag 18582  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  18583 aggagagatgctc 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 3462 - 3249
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| |  || ||||| ||||| |||| ||||||||||| |||||| ||||| || |||||||| ||||||||    
T  3462 tcaagagggctattggttatcaaaagataaggaacttttctgaattggtaagtacctgcaggatatatgaagaggatacgaaagctcattataaggtgat 3363  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||| ||||||||||| |||| ||  || || |||||||| |||||||||||| | ||||||||  |||||||||||||||||||||||    
T  3362 gagtgagcgcagaggcaagggacaacagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcccaag 3263  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  3262 aggagagatgctcc 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 94; Significance: 5e-46; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 48887 - 49100
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||| ||| | |||||||||| ||| || ||  | || |||||||| ||||||||    
T  48887 tcaagagagccatagggtatcagcagattagaattttctctgatttggtaagtcgttgcaggatatatgaggaggactcaaaagctcattataaggtgat 48986  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || |||||| |||||||| || ||||||||| |||||||||| ||||||||||| |||||||| ||     
T  48987 gagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggccgaat 49086  T
Q  201 aggagagatgctcc 214  Q
    ||||| ||||||||    
T  49087 aggagggatgctcc 49100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 57921 - 58134
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||| ||| | |||||||||| ||| || ||  | || |||||||| ||||||||    
T  57921 tcaagagagccatagggtatcagcagattagaattttctctgatttggtaagtcgttgcaggatatatgaggaggactcaaaagctcattataaggtgat 58020  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || |||||| |||||||| || ||||||||| |||||||||| ||||||||||| |||||||| ||     
T  58021 gagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggccgaat 58120  T
Q  201 aggagagatgctcc 214  Q
    ||||| ||||||||    
T  58121 aggagggatgctcc 58134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 30221 - 30012
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||||| || ||||| ||||| | ||| || || || || |||||||||||||||||    
T  30221 tcaagagagccattggttatcagaaaataagaaacttctctgatttggtaagcagctgtaggatttatgaggaggacacgaaagctcattacaaggtgat 30122  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| |||||||| || |||| ||  || || ||||||||||||||||||||| | ||||||||  | |||||||||||||||||||||    
T  30121 gagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaag 30022  T
Q  201 aggagagatg 210  Q
    ||||||||||    
T  30021 aggagagatg 30012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 64309 - 64522
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||||||  |||| |||||||||||||||||||| ||| | |||||||||| ||| || ||  | || |||||||| ||||||||    
T  64309 tcaagagagccatagggtatcaacagattagaattttctctgatttggtaagtcgttgcaggatatatgaggaggactcaaaagctcattataaggtgat 64408  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || |||||| |||||||| || ||||||||| |||||||||| ||||||||||| |||||||| ||     
T  64409 gagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggccgaat 64508  T
Q  201 aggagagatgctcc 214  Q
    ||||| ||||||||    
T  64509 aggagggatgctcc 64522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 22719 - 22506
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||| || || || || |||||||| | ||||||    
T  22719 tcaagagagccattgggtatcagaagataagaattttctctgatttggtaagtagctgcagaatctatgaggaggacacaaaagctcattatatggtgat 22620  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||| | | |  |||||||||||  | |||| || ||||||||| ||||| ||||| |||||  |||| || || |||||||||||||||||||||||     
T  22619 gagtgggcgaaggggtaagggacagtagagtcttcctaaaccatacagtgcccctgccgacaaaggaaatcaaagactgaatgatgagaggaggcccaat 22520  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  22519 aggagagatgctcc 22506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 62479 - 62692
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| | ||||||||| ||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||    
T  62479 tcaagagggctattggctatcaaaagataaggaatttctctgagttggtaagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgat 62578  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| ||||| || || |||| ||  || || |||||||| |||||||||||| | ||||||||  ||||||||||||||||||| |||    
T  62579 gagtgagcgtagaggcaaggggcagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcctaag 62678  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  62679 aggagagatgctcc 62692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 65029 - 65214
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| || |||| ||||||||| ||||||||||||||||| || | |||||| ||||| || |||||||||||||||||    
T  65029 tcaagagagccattggttatcagaaaatcagaaatttctctgagttggtgagtagctgcagaatttatgaagaggatacaaaagctcattacaaggtgat 65128  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatg 186  Q
    ||||||| | |    ||| |||||||| ||||  |  || ||||||||||| |||||||| ||| | |||||||| ||||||||||    
T  65129 gagtgagagaaggaataatggacaacagagtcgcccgaagccatatagtgcccctgctgataagggcaagcagagactgaatgatg 65214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 116221 - 116008
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||| ||||||| ||||||||||||||| || ||||| ||||| ||||||||||||   || |||||||||||||||||    
T  116221 tcaagagggctattggttatcagaaaataagaaatttctctgatttggtaagcagctgtaggatctgtgaagaagatttgaaagctcattacaaggtgat 116122  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| |||||||| || |||| ||  || || ||||||||||||||||||||| | ||| |||| |||||||||||||||||||| |||    
T  116121 gagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagactgaatgatgagaggaggcctaag 116022  T
Q  201 aggagagatgctcc 214  Q
    ||||| ||||||||    
T  116021 aggagggatgctcc 116008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1194 - 1407
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| || |||||||||||||| ||| | |||||||| ||||| || ||||| ||||||| ||| ||||| || || |||||||||||||||||    
T  1194 tcaaaagagctatagggtatcagaagatcagagtcttctctgagttggtaagcagctgtaggatatatgaggaagacacaaaagctcattacaaggtgat 1293  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || ||| || || |||||||||||||||||| |||| ||||   |||||||||| ||||||||||||    
T  1294 gagtgagaggagaggtaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaagggaaaacagaaaatgaatgatgataggaggcccaag 1393  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  1394 aggagagatgctcc 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34934 - 34721
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||| |||| |||||||  |||||||||||||| |||||||||||||| | ||| || || || || |||||||||||||||||    
T  34934 tcaagagtgccattggttattagaaaataagaaacttctctgatttggtaagtagctgcaggatttatgaggaggacacaaaagctcattacaaggtgat 34835  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||| |||||||| || |||| ||  || |  ||||||||||||||||||||| | ||||| ||| | |||||||||||||||||||||    
T  34834 gagtgaacgcagaggcaagggacagcagagtcgtccgaagctgtatagtgctcctgctgacaagggtaagcaaaggttaaatgatgagaggaggcccaag 34735  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  34734 aggagagatgctcc 34721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 154089 - 153876
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| ||||  |||||||| ||||| || ||||| ||||| | ||| || || || || |||||||||||||||||    
T  154089 tcaagagagccattggttatcagaagattagaaacttctctgagttggtaagcagctgtaggatttatgaggaggagacgaaagctcattacaaggtgat 153990  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    | ||||    | |||||||||||| || |||| ||  || |||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||    
T  153989 gggtgaacaaagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgctgacaagggtaagcagcgactgaatgatgagaggaggcccaag 153890  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  153889 aggagagatgctcc 153876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 252216 - 252004
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||| ||||| || ||||||||||||| ||| ||||| || || |||||||||||||||||    
T  252216 tcaaaagagctattaggtatcagaagattagaattttctctgaattggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtgat 252117  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || |||||| || ||||||||||||| ||   |||| || | | |||||||||| ||||||||||||    
T  252116 gagtgagaggaggggtaagggacaacataatcgtcctaaaccttacagtgctcctgctgccacaggaaaacataagatgaatgatgataggaggcccaag 252017  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  252016 aggagagatgctc 252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 6034 - 5824
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| | ||||||||| ||||| |||||||||||||||| |||||| ||||| || ||| |||||||||||||    
T  6034 tcaagagggctattggctatcaaaagataaggaatttctctgaattggtaagtagctgcaggatatatgaagaggatacgaaagcttattacaaggtgat 5935  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||||||||||||||| |||| ||  || || |||||    |||||||||||| | ||||||||  ||||||||||||||||||  |||    
T  5934 gagtgagcgcagaggtaagggacaacatagtcgtccgaagccgtatag---ccctgctgacaagggtaagcagagattgaatgatgagaggaggcttaag 5838  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  5837 aggagagatgctcc 5824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 11455 - 11660
Alignment:
Q  6 agagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtg 105  Q
    |||||||||||||||||  |||| ||| | || || || ||||| |  || || ||||| | ||||||||| || || |||||||||||| | |||||||    
T  11455 agagccattgggtatcaacagatcagagtcttttcggagttggttaacaggtgtaggatttatgaagaagacaccaaagctcattacaagataatgagtg 11554  T
Q  106 agtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggag 205  Q
    || | |  |||||||||||||| | || || ||| || || | ||||| |||||||||  ||||||||| | ||  |||||| |||| ||||||||||||    
T  11555 agaggaggggtaagggacaacagaatcgtcctaagccttacattgctcttgctgacaaaggaaagcagaagatgggtgatgataggaagcccaagaggag 11654  T
Q  206 agatgc 211  Q
    ||||||    
T  11655 agatgc 11660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 43126 - 43339
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||| |||||||| | |||||| |||||||| || ||||| ||||||| | |||| ||||| ||   |||||||||||||||    
T  43126 tcaagagggctattggttatcaaaagataaggaatttctcagatttggtaagcagctgtaggatatattaagaggataccaaatgtcattacaaggtgat 43225  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||| ||||||||||||||| |||| ||  ||||  |||||||||||| || ||||  | || |||||||||||||||||||||||||| |||    
T  43226 gagtgagcgcagaggtaagggacaacagagtcgtccaaaactgtatagtgctccttctaacaaaggtaaacagaggctgaatgatgagaggaggcctaag 43325  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  43326 aggagagatgctcc 43339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 1555 - 1766
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| |||| ||| ||||| ||||| || |||||||| || | ||| |||||| | || |||||||||||||||||    
T  1555 tcaagagggccattggctatcagaagatcagaactttttctgagttggtaagcagctgcagaatctatgaggaagattcaaaagctcattacaaggtgat 1654  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||| |||| |||| || ||| || || ||||| |||||||||||| |||||||  | |||||||||||||| |||||||||    
T  1655 gagtgagcggaggggtaagggaaaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaag 1754  T
Q  201 aggagagatgct 212  Q
    ||||||||||||    
T  1755 aggagagatgct 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 30100 - 29911
Alignment:
Q  24 aagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggac 123  Q
    ||||||||||||| |||||||||||||||||| || || || | |||||| ||||| ||||||||||| ||||||||||||||| | | ||| |||||||    
T  30100 aagataagaattt-ctctgatttggtgagtagttgtagaatctatgaagaggatacaaaggctcattataaggtgatgagtgagcgtagaggcaagggac 30002  T
Q  124 aacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    | || |||| ||  ||||| | ||||||||||||||||||  | |||||||| |||||||||||||||||||| | |||||||||||||||    
T  30001 agcagagtcgtccgaaaccgtctagtgctcctgctgacaaaggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcc 29911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 579 - 792
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||  ||||| |  |||||| | ||||| |  ||||| ||||| | ||| || || || ||  ||||||||||||||||    
T  579 tcaagagagccattggctatcagagaataaggaacttctctaaattggtaaccagctgtaggatttatgaggaggacacgaaatctcattacaaggtgat 678  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    |||||| || | ||||||||||||||| |||| ||  || ||||||||| |||||||||||||| | |||||| | ||||||||||||||||||||||||    
T  679 gagtgaatgtagaggtaagggacaacagagtcgtccgaagccatatagtactcctgctgacaagggtaagcagcgactgaatgatgagaggaggcccaag 778  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  779 aggagagatgctcc 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 252 - 465
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| |||||||| ||||||||||| |||| ||| ||||| ||||| || |||||||| || |  || |||||| | || |||||||||||||||||    
T  252 tcaagagggccattggctatcagaagatcagaactttttctgagttggtaagcagctgcagaatctacgaggaagattcaaaagctcattacaaggtgat 351  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| |||| || ||| || || ||| | |||||||||||| |||||||  |||||||||||||||| || ||||||    
T  352 gagtgagcggaggggtaagggacaacagagtcgtcctaagccgtacagtccccctgctgacaagggaaagcaacggctgaatgatgagagaagacccaag 451  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  452 aggagagatgctcc 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 17234 - 17021
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||  ||||||| | ||| ||||| ||||| || || || || |||| ||||||  |||| || |||||||||||||||||    
T  17234 tcaagagggctattggctatcaatagataaggaatttttctgaattggtaagcagatgtagaatatatgaagagaataccaaagctcattacaaggtgat 17135  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| ||||||| ||||||||||| |||| ||  || || |||||||||||||| |||||| | |||||||  |||||||||||||||||||| |||    
T  17134 gagtgagcgcaaaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgccgacaagggtaagcagaaactgaatgatgagaggaggcctaag 17035  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  17034 aggagagatgctcc 17021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 50702 - 50489
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||||||||||||||||  || ||||| ||||| || ||||| ||||| | |||||||||||| || |||||||||||||||||    
T  50702 tcaagagggctattggttatcagaagataagaaacttttctgagttggtaagcagctgtaggatctatgaagaagatacgaaagctcattacaaggtgat 50603  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||| |||||||| || |||  ||  || || |||||||| |||||||||||| | ||||| ||   ||||||||||||||||||||||    
T  50602 gagtgagcgtagaggcaagggacagcagagtggtccgaagccgtatagtgcccctgctgacaagggtaagcatagatggaatgatgagaggaggcccaag 50503  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  50502 aggagagatgctcc 50489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4161 - 4373
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||||| || ||||| ||||| | ||| || ||||| ||  ||||||||||||||||    
T  4161 tcaagagagccattggttatcagaaaataagaaacttctctgatttggtaagcagctgtaggatttatgaggaggatacgaaa-ctcattacaaggtgat 4259  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||| ||||||||||| |||| ||  || || || | |||||||||||||||| | ||||||||  | |||||||||||||||||||||    
T  4260 gagtgaacgtagaggcaagggacaacagagtcgtccgaagccgtacactgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaag 4359  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  4360 aggagagatgctcc 4373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 263823 - 263610
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||| ||  |||| |||||||||||||||||||| ||| | |||||||| | ||| || || || || | |||||| ||||||||    
T  263823 tcaagagagccatagggtaccaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacaccaaagttcattataaggtgat 263724  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| |||||| || || ||||| |||||||||||| | |||||||| |||||||||||||||||||||       
T  263723 gagtgagcgaagaggtaagggacagcagagtcgtcttaagccgtacagtgcccctgctgacaagggtaagcagagactgaatgatgagaggaggcccgtt 263624  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  263623 aggagagatgctcc 263610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 319840 - 319627
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||||||||||||||||||||  |  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||||||||||||    
T  319840 tcaagagagccattgggtatcagaagataaagaacttctctgaattggtaagtagctgcagaatttatgaggaggacacgaaagctcattacaaggtgat 319741  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
     |||||  | |  || || ||||| || |||| ||  || || |||||||||||||||||||||   ||||||||||||||||||||||||||||||||     
T  319740 aagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaggataagcagaggctgaatgatgagaggaggcccaat 319641  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  319640 aggagagatgctcc 319627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 326155 - 326091
Alignment:
Q  149 tgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  326155 tgctcctgctaacaagggtaagcagaggctgaatgatgagaggagg-ccaataggagagatgctcc 326091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 203978 - 203765
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||| ||  |||| |||||||||||||||||||| ||| | |||||||| | ||| || || || || |||||||| ||||||||    
T  203978 tcaagagagccatagggtaccaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacaccaaagctcattataaggtgat 203879  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || ||| || || ||||| |||||||||||| | |||||||| |||||||||||||||||||||       
T  203878 gagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcagagactgaatgatgagaggaggcccgtt 203779  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  203778 aggagagatgctcc 203765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 6191 - 5989
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagt 108  Q
    |||||||| ||||| |||||||| | |||||| |||||||| || ||||  || |||| |||||| ||||| || |||||||| || ||||||||||||     
T  6191 gccattggttatcaaaagataaggaatttctcggatttggtaagcagctttagaatatatgaagaggatacgaaagctcattataaagtgatgagtgagc 6092  T
Q  109 gcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagaga 208  Q
    ||| ||||||||| || || |||| ||  ||||| ||||||||||||||||||||  |||| |||| ||||||||||||||||||||| | |||||||||    
T  6091 gcagaggtaagggtcagcagagtcgtccgaaaccgtatagtgctcctgctgacaaaggaaaacagatgctgaatgatgagaggaggcctaggaggagaga 5992  T
Q  209 tgc 211  Q
    |||    
T  5991 tgc 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 17191 - 17404
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||| ||  |||| ||||| |||||||||||||| | | | |||||||| | ||| || || || || |||||||| ||||||||    
T  17191 tcaagagagccatagggtagcaacagattagaatcttctctgatttggtaaatcgttgcaggatctatgaggaggacacaaaagctcattataaggtgat 17290  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | |||||||||||| || |||| || |||||| || ||||| |||||||||||| |||| || || |||||||||||||||||||| ||     
T  17291 gagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaaacaaagactgaatgatgagaggaggccgaat 17390  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  17391 aggagagatgctcc 17404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 4640 - 4769
Alignment:
Q  85 ctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatga 184  Q
    ||||||| ||||||||||||||| | | |||||||||||| || |||| || |||||| || ||||| |||  ||||||| ||||||| || ||||||||    
T  4640 ctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgccccttttgacaagggaaagcaaagactgaatga 4739  T
Q  185 tgagaggaggcccaagaggagagatgctcc 214  Q
    |||||||||||| || ||||||||||||||    
T  4740 tgagaggaggccaaataggagagatgctcc 4769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 12121 - 12330
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| |||||||  ||| |||||||||| || ||||| ||||| | ||| || ||||| || | |||||||||||||||    
T  12121 tcaagagagccattggttatcagaaaataagaaacttcactgatttggtaagcagctgtaggatttatgaggaggatacgaaagatcattacaaggtgat 12220  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||| |||||| | || |||| ||  || || || |||||||||||||||||| | |||||||| |||||||||||||| |||||||||    
T  12221 gagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagtaggcccaag 12320  T
Q  201 aggagagatg 210  Q
    ||||||||||    
T  12321 aggagagatg 12330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 20301 - 20510
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| |||||||  ||| |||||||||| || ||||| ||||| | ||| || ||||| || | |||||||||||||||    
T  20301 tcaagagagccattggttatcagaaaataagaaacttcactgatttggtaagcagctgtaggatttatgaggaggatacgaaagatcattacaaggtgat 20400  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||| |||||| | || |||| ||  || || || |||||||||||||||||| | |||||||| |||||||||||||| |||||||||    
T  20401 gagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagtaggcccaag 20500  T
Q  201 aggagagatg 210  Q
    ||||||||||    
T  20501 aggagagatg 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 249 - 462
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| ||||||||||| | ||  |||||||||||||| || || |||||||| | ||| || || |  || |||||||||||||||||    
T  249 tcaagagagccattggttatcagaagattaaaaacttctctgatttggtaagcagttgcaggatttatgaggaggacaggaaagctcattacaaggtgat 348  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    |||| |  | | |||||||||||| || |||| ||  || || |||||||||||| |||||||| | ||||||||| | ||||||||||| |||||||||    
T  349 gagtaaacgtagaggtaagggacagcacagtcgtccgaagccgtatagtgctccttctgacaagggtaagcagaggttaaatgatgagagaaggcccaag 448  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  449 aggagagatgctcc 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 4022 - 4224
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    ||||| ||||| |||||||| |  || ||||| ||||| ||||| || ||||| | |||||| ||||| || |||||||| || |||||||||||| |||    
T  4022 attggttatcaaaagataaggaacttttctgaattggtaagtagttgtaggatctatgaagaggatacaaaagctcattataaagtgatgagtgagcgca 4121  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
     ||||||||||||  | |||| ||  ||||| ||||||||||||||||||||  | || |||||| ||||||||||||||||||| ||||||||||||||    
T  4122 gaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgc 4221  T
Q  212 tcc 214  Q
    |||    
T  4222 tcc 4224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 52237 - 52035
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    ||||| ||||| |||||||| | | | ||||| ||||| || ||||| ||||| | |||||| ||||| ||||||||||| || |||||||||||| |||    
T  52237 attggttatcaaaagataaggaatatttctgaattggtaagcagctgtaggatttatgaagaggatacaaaggctcattataaagtgatgagtgagcgca 52138  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
     |||||||||||| || || | ||  ||||  ||||||||||||||||||||  | || |||||||||||||||||||||||||| | ||||||||||||    
T  52137 gaggtaagggacagcagagccgtccgaaactgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaggaggagagatgc 52038  T
Q  212 tcc 214  Q
    |||    
T  52037 tcc 52035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40655 - 40442
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| ||||| ||  | || ||||| |||||| ||||||| ||| | ||||| || | | |||| || || || |||||||| ||||||||    
T  40655 tcaagagagccatagggtaccaatatattagaatcttctctaatttggtaagtcgttgcagaatctataaagaggacacaaaagctcattataaggtgat 40556  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||||| ||||||||| |||| || |||||| || ||||| |||||||||||| ||||||| || |||||||||||||||||||| ||     
T  40555 gagtgagcgaagaggtatgggacaacagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaat 40456  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  40455 aggagagatgctcc 40442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 43295 - 43082
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||| |||||||  |||||||||||||| || ||||| | ||| | ||| || ||||| || |||||||||||||||||    
T  43295 tcaagagggctattggttatcagaaaataagaaacttctctgatttggtaagcagctgtaagatctatgatgaggatacaaaagctcattacaaggtgat 43196  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    |||| || ||  ||| ||||||||  | |||| ||  || || |||||||| |||||||||||| | || |||||| ||||||||||||||||||| |||    
T  43195 gagtaagcgccgaggcaagggacagtagagtcgtccgaagccgtatagtgcccctgctgacaagggtaaacagaggttgaatgatgagaggaggcctaag 43096  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  43095 aggagagatgctcc 43082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 2426 - 2215
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    ||||||||||| ||||||||  |||| ||||||||||||||||| || ||| | |||| ||| | ||| || || || || |||||||| ||||||||||    
T  2426 aagagagccatagggtatcaacagattagaattttctctgatttagtaagtcgttgcaagatctatgaggaggacacaaaagctcattataaggtgatga 2327  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    ||||| | | |||||||||||| || |||| || |||||| || ||||| ||| |||||||  ||||||| ||| ||||||||||||||||||  || ||    
T  2326 gtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctactgacaaaggaaagcaaaggttgaatgatgagaggaggcggaatag 2227  T
Q  203 gagagatgctcc 214  Q
    ||||||||||||    
T  2226 gagagatgctcc 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 5964 - 6177
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| || || ||  |||| |||||||||||||||||||| |||   |||||||| | ||| || || || || |||||||| || |||||    
T  5964 tcaagagagccataggataccaacagattagaattttctctgatttggtaagtcattgcaggatttatgaggaggacaccaaagctcattataaagtgat 6063  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | ||||||||||||||| |||| || ||| || || ||||| |||||||||||| | ||||| || |||||||||||||||||||| ||     
T  6064 gagtgaacgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcaaagactgaatgatgagaggaggccgaat 6163  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  6164 aggagagatgctcc 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6401 - 6190
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||| |||||||| ||||| |  |||| ||| ||||  || ||||| ||||| | ||| || || || || |||||||||||||||||    
T  6401 tcaagagagccattggctatcagaaaataaggaacttctttgaattgggaagcagctgtaggatttatgaggaggacacgaaagctcattacaaggtgat 6302  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  ||| ||| |||||||| || |||| ||  || || |||||||||||| |||||||| | ||||| ||| | |||||||||||||||||||||    
T  6301 gagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctactgacaagggtaagca-aggttaaatgatgagaggaggcccaag 6203  T
Q  201 aggagagatgctc 213  Q
    |||||||||||||    
T  6202 aggagagatgctc 6190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 37536 - 37329
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||| ||||| |||||||| || ||||  || | |||  || | || ||||| ||||| | |||||||||||| || |||||||||||||||||    
T  37536 tcaagagagctattggatatcagaaaattagaaacttttatgagctgttaagcagctgtaggatctatgaagaagatacgaaagctcattacaaggtgat 37437  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | | |||||||||||| || |||| ||  || || |||||||||| ||| |||||| | ||||||||  |||||||||||||||||||||||    
T  37436 gagtgaacgtagaggtaagggacagcagagtcgtccgaagccgtatagtgctcttgccgacaagggtaagcagagattgaatgatgagaggaggcccaag 37337  T
Q  201 aggagaga 208  Q
    ||||||||    
T  37336 aggagaga 37329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 23630 - 23843
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| | ||| ||||| || | ||||||||| || ||  ||||||| ||| | ||    
T  23630 tcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaaactcattataagattat 23729  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| |||| || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  23730 gagtgagaggaggggtaagggacaacagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 23829  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  23830 aggagagatgctcc 23843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 66817 - 67028
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||| |||||||||||| |||| ||| | |||||||||||||| |  ||||||||||| | ||| ||||| || || |||||||||||| | ||||    
T  66817 aagagagctattgggtatcagcagatcagagtgttctctgatttggtaaacagctgcaggatttatgaggaagacaccaaagctcattacaagataatga 66916  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    ||||| | |  || |||||||| || | || || ||| || || |||||||||| ||||||  ||||| ||| | |||||||||| ||||| ||||||||    
T  66917 gtgagaggaggggcaagggacagcagaatcgtcctaagccttacagtgctcctgttgacaaaggaaagtagatgatgaatgatgataggagacccaagag 67016  T
Q  203 gagagatgctcc 214  Q
    ||||||||||||    
T  67017 gagagatgctcc 67028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 2305 - 2104
Alignment:
Q  12 attgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgca 111  Q
    ||||| |||||||||||||||| ||| ||||| || || || ||||| || || | |||||| ||||| || |||||||| || |||||||||||| |||    
T  2305 attggttatcagaagataagaaatttttctgaattagtaagcagctgtagaatctatgaagaggatacaaaagctcattataaagtgatgagtgagcgca 2206  T
Q  112 aaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgc 211  Q
     |||||||||| |  | |||| ||  ||||| | ||||||| ||||||||||  | || |||||||||||||||||||||||||| |||||| |||||||    
T  2205 gaggtaagggatagtagagtcgtccgaaaccgt-tagtgcttctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggtgagatgc 2107  T
Q  212 tcc 214  Q
    |||    
T  2106 tcc 2104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5777 - 5565
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| |||||||||||||| |  || ||||| ||||| ||||||| || ||| | |||||| ||||| || ||||||||||| |||||    
T  5777 tcaagagggctattggttatcagaagataaggaacttttctgaattggtaagtagctacaagatttatgaagaggataccaaagctcattacaaagtgat 5678  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    |||||||   | ||  |||||||| || |||||||  || || || ||||| ||| |||||||| | ||||||||  ||||||||||||||||| |||||    
T  5677 gagtgagcatagagtcaagggacagcagagtcatcggaagccgtacagtgcccctactgacaagggtaagcagagattgaatgatgagaggagg-ccaag 5579  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  5578 aggagagatgctcc 5565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 7619 - 7422
Alignment:
Q  17 gtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggt 116  Q
    |||||||||||| || |  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||||||||||||||||||  | |   |     
T  7619 gtatcagaagatcaggaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattacaaggtgatgagtgatcgaaggagc 7520  T
Q  117 aagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    || ||||| || |||| ||  || || ||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  7519 aaaggacagcagagtcgtccgaagccgtatagtgctcctgttgacaagggtaagcagaggttgaatgatgagaggaggcccaataggagagatgctcc 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54 - 1
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagta 54  Q
    |||||||||||||||||||||||||||| || |  |||||||| ||||| ||||    
T  54 tcaagagagccattgggtatcagaagatcaggaacttctctgaattggtaagta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 9495 - 9707
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||| | ||| ||  |||| ||||||||||| |||||||| ||| | |||||||| | ||| || || || || |||||||| ||||||||    
T  9495 tcaagagagccatagtgtaccaacagattagaattttctc-gatttggtaagtcgttgcaggatctatgaggaggacaccaaagctcattataaggtgat 9593  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | | ||||||||||||||| |||| || ||| || || ||||| |||||||| ||| | |||| ||| || ||||||||||||||||||       
T  9594 gagtgagcgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgataagggtaagctgagacttaatgatgagaggaggcccgtt 9693  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  9694 aggagagatgctcc 9707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 42332 - 42119
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| | | | |||||||| ||||| | ||| ||||| || | ||||||||| || || |||||||| ||| | ||    
T  42332 tcaaaagagctattgggtatcagcagatcaaagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataagattat 42233  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  |||||||||||||| | || || ||| || || |||||||||||||||||  ||||||||| | ||  |||||| ||||||||||||    
T  42232 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaag 42133  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  42132 aggagagatgctcc 42119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 961 - 1132
Alignment:
Q  25 agataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggaca 124  Q
    |||| |||||||||||| ||||||||||| |||||||||| | ||| || || || || |||||||| ||||||| ||||||| | | ||||||||||||    
T  961 agatcagaattttctctaatttggtgagtcgctgcaggatctatgaggaggacaccaaagctcattataaggtgaagagtgagcgaagaggtaagggaca 1060  T
Q  125 acaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     || | || || |||||| |||||||| || ||||| ||| | |||||||| || |||||||||||||||||    
T  1061 tcagaatcgtcctaaaccgtatagtgccccggctgataagggtaagcagagacttaatgatgagaggaggcc 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 1013 - 1224
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||| |||||||||||| |||| ||| | |||||||| ||||| |  || |||||||| |  |||||||| || || |||||||||||| | ||||    
T  1013 aagagagctattgggtatcagcagatcagattcttctctgagttggtaaacagttgcaggatttacgaagaagacaccaaagctcattacaagataatga 1112  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    ||||| | |  || ||||||||  | | || || ||| || || |||||||||||||||||  ||||||||| | |||||||||| ||||| ||||||||    
T  1113 gtgagaggaggggaaagggacagaagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggagacccaagag 1212  T
Q  203 gagagatgctcc 214  Q
    ||||||||||||    
T  1213 gagagatgctcc 1224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 11572 - 11361
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||  |||||||||||| |||| ||| | |||||||| ||||| |  ||||||||||| | ||| ||||| || || |||||||||||| | ||||    
T  11572 aagagagttattgggtatcagcagatcagagtcttctctgagttggtaaacagctgcaggatttatgaggaagacaccaaagctcattacaagataatga 11473  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    ||||| | |  |||||||| || || | || || ||| || ||||||||||||||||||||  |||||||||   |||||||||| ||||| || |||||    
T  11472 gtgagaggaggggtaagggtcagcagattcgtcctaagccttatagtgctcctgctgacaaaggaaagcagattttgaatgatgataggagtcctaagag 11373  T
Q  203 gagagatgctcc 214  Q
    ||||||||||||    
T  11372 gagagatgctcc 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 54644 - 54446
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||||| || | ||| || || |  || |||||||| ||||||||    
T  54644 tcaaaagagccattgggtatcagaagatcagaaacttctctgaattggtaagtagctgcagaatctatgaggaggacatgaaagctcattataaggtgat 54545  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaa 199  Q
    ||||||  | |   | || ||||| || |||| ||  || || ||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||    
T  54544 gagtgatcgaaggagcaaaggacatcagagtcgtccaaagccgtatagtgctcctgctgacaaagggaagcagaggttgaatgatgagaggaggcccaa 54446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1314 - 1527
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||||||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||  | ||    
T  1314 tcaaaagagctattgggtatcagcagataagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacaccaaagctcattacaacataat 1413  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||||||| | ||| |||||| |||||||| |||    
T  1414 gagtgagaggaggggtaagggacagcagaatcgtcataagccttacagtgctcctgctgacaaaggaaagcagaagatgagtgatgataggaggcctaag 1513  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  1514 aggagagatgctcc 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 93603 - 93703
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    ||||||||||| || ||||||||||| ||||||||||| || ||||||||||||||||| || | ||| || ||||| ||||||||||||||||||||||    
T  93603 aagagagccataggatatcagaagatcagaattttctcagaattggtgagtagctgcagaatttatgaggaggatacgaaggctcattacaaggtgatga 93702  T
Q  103 g 103  Q
    |    
T  93703 g 93703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 214
Target Start/End: Original strand, 514065 - 514273
Alignment:
Q  6 agagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtg 105  Q
    ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||||||| | |||||||    
T  514065 agagctattgggtatcagcagatcagagtcttctctgagttggtaaacaggtgtagaatttatgaagaagacaccaaagctcattacaagataatgagtg 514164  T
Q  106 agtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggag 205  Q
    || | |  ||||||||||| || | || || ||| || || |||||||||||||||||  ||||| ||| | |||||||||| |||||||| ||||||||    
T  514165 agaggaggggtaagggacagcagaatcgtcctaagccttaaagtgctcctgctgacaaaggaaagaagaagatgaatgatgataggaggcctaagaggag 514264  T
Q  206 agatgctcc 214  Q
    |||||||||    
T  514265 agatgctcc 514273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 74 - 204
Alignment:
Q  84 gctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatg 183  Q
    |||||||||||||||||||||||  ||| ||| |||||||| || |||| ||  || || || | |||||||||||||||| | ||||||||| | ||||    
T  74 gctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtaaaatgctcctgctgacaagggtaagcagaggttaaatg 173  T
Q  184 atgagaggaggcccaagaggagagatgctcc 214  Q
    ||||||||||||||||||| ||||| |||||    
T  174 atgagaggaggcccaagagcagagaggctcc 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 615 - 775
Alignment:
Q  48 gtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatata 147  Q
    ||||| ||||| ||||| | |||||| ||||| || |||||  | ||||||||||||||||| | |||||||||||| || |||| ||  ||||| || |    
T  615 gtgagcagctgtaggatttatgaagaggatacaaaagctcac-ataaggtgatgagtgagtgtagaggtaagggacagcagagtcgtccgaaaccgtaca 713  T
Q  148 gtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagat 209  Q
    ||||||||||||||||  | ||  |||| |||||||||||||||||||| ||||||||||||    
T  714 gtgctcctgctgacaaaggtaaatagagactgaatgatgagaggaggcctaagaggagagat 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 9211 - 8998
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||||||||||||||| |||||||| | ||  |||||||| ||||| ||||||||||  || | ||| || || || ||  |||||||  |||||||    
T  9211 tcaagagagccattgggtaccagaagatcaaaaacttctctgaattggtaagtagctgcataatctatgaggaggacacgaaatctcattattaggtgat 9112  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaag 200  Q
    ||||||  | |   | || ||||| || |||| ||  || || ||||||||||||||||||||  | ||||||| ||||||||||||||| || ||||||    
T  9111 gagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagctgaatgatgagagaagacccaag 9012  T
Q  201 aggagagatgctcc 214  Q
    ||||||||||||||    
T  9011 aggagagatgctcc 8998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 1042 - 845
Alignment:
Q  17 gtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggt 116  Q
    ||||||| |||| ||||| |||||||| ||||| |  || ||||| || | ||||||||| || || |||||||||||| | ||||||||| | |  |||    
T  1042 gtatcagcagatcagaatcttctctgagttggttaacagatgcagaatttatgaagaagacaccaaagctcattacaagataatgagtgagaggaggggt 943  T
Q  117 aagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||||||| || | || || ||| || || |||||||||||||||||  ||||| ||| | ||| |||||| |||||||| |||||||||||||||||    
T  942 aagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagtagaagttgattgatgataggaggcctaagaggagagatgctcc 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 4988 - 5065
Alignment:
Q  137 taaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||||| || |||||||||||||||||  | ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  4988 taaaccttacagtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcc 5065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3758 - 3863
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||||||||||||||||||||| || |  |||||||| ||||| ||||||||||| || | ||| || || || || |||||||||||||||||    
T  3758 tcaagagagccattgggtatcagaagatcaggaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattacaaggtgat 3857  T
Q  101 gagtga 106  Q
    ||||||    
T  3858 gagtga 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 30077 - 30246
Alignment:
Q  45 ttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccat 144  Q
    ||||| || ||||||||||||| ||| || || || || ||||||||| || | ||||||||| | |  ||||||||| |||| | || || |||||| |    
T  30077 ttggtaagcagctgcaggatatatgaggaggacacaaaagctcattactagataatgagtgagaggaggggtaagggataacagaatcgtcctaaacctt 30176  T
Q  145 atagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    | |||||||||||||||||  | || |||| | |||||||||| |||||||||||||||| |||||||||    
T  30177 acagtgctcctgctgacaaagggaaacagaagatgaatgatgacaggaggcccaagaggaaagatgctcc 30246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 7425 - 7275
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || |||||||||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| ||| | || |||||||  |  || || ||    
T  7425 tggtgagcagttgcaggatatatgaggaagatactaaggctcattacaaggttgtgaatgagcggaaaggcaagagtcagcaaagtcgaccaaagcctta 7326  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||||||||||||| ||| | ||||| ||  |||||||||||||||||||    
T  7325 cagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcc 7275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 14555 - 14405
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || |||||||||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| ||| | || |||||||  |  || || ||    
T  14555 tggtgagcagttgcaggatatatgaggaagatactaaggctcattacaaggttgtgaatgagcggaaaggcaagagtcagcaaagtcgaccaaagcctta 14456  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||||||||||||| ||| | ||||| ||  |||||||||||||||||||    
T  14455 cagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcc 14405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 63246 - 63352
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    ||||||| || ||||| ||| ||||||||||||  || ||||| ||||| |||||||| ||||| | |||||| ||||| || |||||||||||||||||    
T  63246 tcaagagggctattggttatgagaagataagaaacttttctgaattggtaagtagctgtaggatttatgaagaggatacgaaagctcattacaaggtgat 63345  T
Q  101 gagtgag 107  Q
    |||||||    
T  63346 gagtgag 63352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 63378 - 63439
Alignment:
Q  153 cctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    |||||||||||| | ||||| ||  |||||||||||||||||||||||||||||||||||||    
T  63378 cctgctgacaagggtaagcaaagattgaatgatgagaggaggcccaagaggagagatgctcc 63439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 16354 - 16511
Alignment:
Q  39 tctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatctta 138  Q
    ||||| |||||||| || |||||||| | ||| |||||||| || |||||||||||||| ||||||||| | |  |||||| | || || |||| ||  |    
T  16354 tctgaattggtgagaagttgcaggatctatgaggaagataccaaagctcattacaaggttatgagtgagcggaggggtaagagtcagcagagtcgtccaa 16453  T
Q  139 aaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
    | || ||||||||||||||||| ||  | ||||| ||| |||||||||||||||||||    
T  16454 agccttatagtgctcctgctgataaaggtaagcaaagggtgaatgatgagaggaggcc 16511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 750 - 848
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgag 107  Q
    |||||||| ||||||||||| ||||  || ||||| |||||||||||||| ||||| | ||| || ||||| || |||||||| |||||||||||||||    
T  750 gccattggttatcagaagattagaaacttttctgagttggtgagtagctgtaggatttatgaggatgataccaaagctcattataaggtgatgagtgag 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 12398 - 12328
Alignment:
Q  144 tatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcc 214  Q
    ||||||||||||||||||||    || ||||||||||||||||||||||||||  ||||||||||||||||    
T  12398 tatagtgctcctgctgacaaagataaacagaggctgaatgatgagaggaggccttagaggagagatgctcc 12328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 26049 - 25951
Alignment:
Q  9 gccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgag 107  Q
    |||||||| ||||||||||| ||||  || ||||| |||||||||||||| ||||| | ||| || ||||| || |||||||| |||||||||||||||    
T  26049 gccattggttatcagaagattagaaacttttctgagttggtgagtagctgtaggatttatgaggatgataccaaagctcattataaggtgatgagtgag 25951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 57366 - 57516
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || || || |||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| || || || ||||||| ||  || || ||    
T  57366 tggtgagcagttgtagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagcggaaaggcaaaggtcagcaaagtcgtccaaagcctta 57465  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||||||||||||| ||| | ||||| ||  |||||||||||||||||||    
T  57466 cagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcc 57516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 512 - 723
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||| ||| |||||||||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || | | |||||||| | ||||    
T  512 aagatagctattgggtatcagcagattagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacaccaaagtttattacaagataatga 611  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagag 202  Q
    || || | |  ||||||||||| || | || || ||| || || |||||||||  ||||||  ||||||||| | |||||||||| |||||||| |||||    
T  612 gttagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctattgacaaaggaaagcagaagatgaatgatgataggaggcctaagag 711  T
Q  203 gagagatgctcc 214  Q
    ||||||||||||    
T  712 gagagatgctcc 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 11580 - 11466
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || ||||| |||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| ||||| || ||||||| ||  || || ||    
T  11580 tggtgagcagttgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtcccaagcctta 11481  T
Q  146 tagtgctcctgctga 160  Q
    |||||| ||||||||    
T  11480 tagtgcccctgctga 11466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 14017 - 14167
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || ||||| |||| ||| ||||||||||||||||||||||||||  ||| |||| | ||||| ||||| || ||||||| ||  || || ||    
T  14017 tggtgagcagttgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagcctta 14116  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||||||||| ||| ||| |||| || ||  | |||||||||| ||||||    
T  14117 cagtgctcctgatgataagggaaaacaaagaataaatgatgagaagaggcc 14167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 30507 - 30334
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||| ||||| |||||||||||| |||| ||| | |||||||| ||||| |  || ||||| || | ||||||||| || || ||||||||||||   ||    
T  30507 tcaatagagctattgggtatcagcagatcagagtcttctctgagttggttaacagttgcagaatttatgaagaagacaccaaagctcattacaagacaat 30408  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcaga 174  Q
    ||||||| | |  || |||||||| || |||| || ||| || || |||||||||||||||||  |||||||||    
T  30407 gagtgagaggaggggcaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 30334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23005 - 23100
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaagg 96  Q
    ||||||| |||||||||||||| |||||  | |  || ||||| ||||||||||||||||  || | ||| ||||||||||| |||||||||||||    
T  23005 tcaagagggccattgggtatcaaaagatccgtaacttttctgagttggtgagtagctgcaaaatctatgaggaagatactaaagctcattacaagg 23100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 3742 - 3808
Alignment:
Q  144 tatagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaagaggagagatg 210  Q
    ||||||||||||||||||||| | || || ||  |||||||||||||||| || |||||||||||||    
T  3742 tatagtgctcctgctgacaaggggaaacaaagattgaatgatgagaggagacctaagaggagagatg 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 139347 - 139413
Alignment:
Q  31 gaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    |||||||| ||||||| |||| |||||||||||| |  || |||||||| |||||||||||||||||    
T  139347 gaattttccctgatttagtgaatagctgcaggatctacgaggaagatacaaaggctcattacaaggt 139413  T

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Target: scaffold0605 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 1848 - 1775
Alignment:
Q  30 agaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgag 103  Q
    ||||||||||| || |||||||||||||| || || | ||| || ||||| ||||||||||| |||||||||||    
T  1848 agaattttctcagaattggtgagtagctgtagaatttatgaggaggatacaaaggctcattataaggtgatgag 1775  T

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Target: scaffold0285 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 5556 - 5499
Alignment:
Q  40 ctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    |||||||||||| ||||||||| || | ||| || |||||||||||||||||||||||    
T  5556 ctgatttggtgaatagctgcagaatctatgatgaggatactaaggctcattacaaggt 5499  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 216201 - 216322
Alignment:
Q  75 gatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcaga 174  Q
    |||||||||||||||||||||||  ||| |||| | ||||| ||||| || ||||||| ||  || || || |||||||||||||| ||| | ||||| |    
T  216201 gatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaa 216300  T
Q  175 ggctgaatgatgagaggaggcc 196  Q
    |  |||||||| | ||||||||    
T  216301 gattgaatgataaaaggaggcc 216322  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 17834 - 17682
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatga 102  Q
    |||||||| |||||||||||| |||| ||| | |||||||| ||||| |  || ||||| || | ||||||||| || || |||||||| ||| | ||||    
T  17834 aagagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagttgcagaatttatgaagaagacaccaaagctcattataagataatga 17735  T
Q  103 gtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcct 155  Q
    ||||| | |  ||||||||||| || |||| || ||| || || |||||||||    
T  17734 gtgagaggaggggtaagggacagcagagtcgtcctaagccttacagtgctcct 17682  T

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Target: scaffold0529 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 5640 - 5490
Alignment:
Q  46 tggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccata 145  Q
    ||||||| || ||||| || | ||| |||||||| || ||||||||||||||  ||| |||| | || |||| | | || ||||||| ||| || || ||    
T  5640 tggtgagcagttgcagaatctatgaggaagatacgaaagctcattacaaggttgtgaatgagaggaagggtaggagtcagcaaagtcgtctaaagcctta 5541  T
Q  146 tagtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcc 196  Q
     |||| || |||||| ||| | ||||| ||| |||||||||||||||||||    
T  5540 cagtgttcttgctgataagggtaagcaaagggtgaatgatgagaggaggcc 5490  T

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Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 8811 - 8765
Alignment:
Q  42 gatttggtgagtagctgcaggatatgtgaagaagatactaaggctca 88  Q
    |||||||| | |||||||||||| | |||||||||||||||||||||    
T  8811 gatttggtcaatagctgcaggatctatgaagaagatactaaggctca 8765  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 2450 - 2396
Alignment:
Q  147 agtgctcctgctgacaagcgaaagcagaggctgaatgatgagaggaggcccaaga 201  Q
    |||||||| ||||| ||| | ||||||||| |||||||||||||||| |||||||    
T  2450 agtgctccggctgataagggtaagcagagggtgaatgatgagaggagacccaaga 2396  T

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Target: scaffold1600 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 589 - 468
Alignment:
Q  75 gatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcaga 174  Q
    |||||||| |||||||||||||   |||||||| | ||||||||||| || |||||||  |  || || || || ||||||||||| ||| | || || |    
T  589 gatactaaagctcattacaaggctgtgagtgagaggaaaggtaagggtcagcaaagtcgcccaaagccttacagcgctcctgctgataagggtaaacaaa 490  T
Q  175 ggctgaatgatgagaggaggcc 196  Q
    |  |||||||||||||||||||    
T  489 gagtgaatgatgagaggaggcc 468  T

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Target: scaffold0457 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 13761 - 13934
Alignment:
Q  1 tcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggtgat 100  Q
    |||||||||| ||| | |||||| |||| ||| | |||||||| ||||| |  || || || || | ||||||||| || || |||||||| ||| | ||    
T  13761 tcaagagagctattagatatcagcagatcagagtcttctctgagttggttaacaggtgtagaatctatgaagaagacaccaaagctcattaaaagataat 13860  T
Q  101 gagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagcaga 174  Q
    ||||||| | |  ||||||||||| || | || || ||| || || |||||||||||||||||  |||||||||    
T  13861 gagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 13934  T

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Target: scaffold1423 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 87 - 179
Alignment:
Q  3 aagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaag 95  Q
    ||||| || ||||| || ||||||||  || |||||| |||  ||||||| || |||||||| | ||| || |||||||||||||||||||||    
T  87 aagagggcaattggttaccagaagattcgagttttctttgagatggtgagcagttgcaggatttatgatgaggatactaaggctcattacaag 179  T

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Target: scaffold1274 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 143 - 20
Alignment:
Q  72 gaagatactaaggctcattacaaggtgatgagtgagtgcaaaggtaagggacaacaaagtcatcttaaaccatatagtgctcctgctgacaagcgaaagc 171  Q
    |||||||| || ||||||||||||||  ||| |||| | ||||| ||||  || ||||||| ||  || || || |||||||||||||| ||| | ||||    
T  143 gaagataccaaagctcattacaaggttgtgaatgagaggaaaggcaaggt-cagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagc 45  T
Q  172 agaggctgaatgatgagaggaggcc 196  Q
    | ||  |||||||||||||||||||    
T  44 aaagattgaatgatgagaggaggcc 20  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 601 - 541
Alignment:
Q  37 tctctgatttggtgagtagctgcaggatatgtgaagaagatactaaggctcattacaaggt 97  Q
    ||||||| |||||||| || |||||||| | ||| || || ||||||||||||||||||||    
T  601 tctctgagttggtgagcagttgcaggatttatgaggaggacactaaggctcattacaaggt 541  T

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