View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6692_low_24 (Length: 328)

Name: NF6692_low_24
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6692_low_24
NF6692_low_24
[»] chr8 (10 HSPs)
chr8 (12-311)||(31224471-31224770)
chr8 (26-303)||(2690043-2690318)
chr8 (26-135)||(5759566-5759676)
chr8 (26-123)||(11430452-11430549)
chr8 (26-135)||(20531104-20531214)
chr8 (26-135)||(23014789-23014899)
chr8 (26-117)||(31991435-31991527)
chr8 (26-60)||(20851721-20851755)
chr8 (26-121)||(31999025-31999121)
chr8 (26-135)||(33773913-33774023)
[»] chr2 (10 HSPs)
chr2 (26-304)||(21109285-21109561)
chr2 (26-279)||(69861-70113)
chr2 (26-135)||(3605707-3605816)
chr2 (27-126)||(24238773-24238872)
chr2 (26-135)||(22687455-22687564)
chr2 (212-311)||(24238977-24239076)
chr2 (26-130)||(12570757-12570862)
chr2 (26-121)||(45191018-45191114)
chr2 (26-135)||(37862801-37862911)
chr2 (26-60)||(574508-574542)
[»] chr1 (17 HSPs)
chr1 (30-253)||(22956637-22956860)
chr1 (26-136)||(21792910-21793020)
chr1 (26-135)||(37012159-37012268)
chr1 (26-136)||(21821220-21821330)
chr1 (26-135)||(4950693-4950802)
chr1 (26-123)||(49333525-49333622)
chr1 (26-123)||(18096718-18096815)
chr1 (26-123)||(25823236-25823333)
chr1 (26-135)||(26193232-26193332)
chr1 (26-131)||(22961061-22961166)
chr1 (26-120)||(20317826-20317921)
chr1 (26-123)||(25039197-25039295)
chr1 (26-115)||(25044409-25044499)
chr1 (26-93)||(20328308-20328376)
chr1 (30-130)||(20314603-20314704)
chr1 (26-93)||(27066298-27066366)
chr1 (26-135)||(20309036-20309146)
[»] chr7 (10 HSPs)
chr7 (26-134)||(9007104-9007212)
chr7 (26-123)||(12491510-12491607)
chr7 (37-123)||(12515318-12515404)
chr7 (26-120)||(19585957-19586052)
chr7 (26-135)||(10415867-10415977)
chr7 (26-121)||(24540605-24540701)
chr7 (26-121)||(45553383-45553479)
chr7 (248-303)||(12491312-12491366)
chr7 (85-183)||(12770258-12770356)
chr7 (220-256)||(9006973-9007009)
[»] chr5 (14 HSPs)
chr5 (26-255)||(21483786-21484016)
chr5 (30-136)||(20897116-20897222)
chr5 (29-123)||(205461-205555)
chr5 (26-120)||(34130468-34130563)
chr5 (26-136)||(20904514-20904624)
chr5 (26-103)||(19780784-19780861)
chr5 (26-130)||(27274160-27274265)
chr5 (26-93)||(37298793-37298861)
chr5 (26-135)||(4037958-4038068)
chr5 (26-60)||(31917055-31917089)
chr5 (27-135)||(20764521-20764630)
chr5 (26-93)||(13571659-13571727)
chr5 (26-93)||(22173231-22173299)
chr5 (26-93)||(37817807-37817875)
[»] scaffold0142 (1 HSPs)
scaffold0142 (49-237)||(28545-28733)
[»] scaffold0406 (1 HSPs)
scaffold0406 (26-278)||(15439-15696)
[»] scaffold0015 (2 HSPs)
scaffold0015 (87-253)||(198513-198679)
scaffold0015 (30-91)||(197180-197241)
[»] chr4 (9 HSPs)
chr4 (26-135)||(44888908-44889017)
chr4 (30-105)||(14600461-14600535)
chr4 (26-123)||(16210953-16211050)
chr4 (26-123)||(16397102-16397199)
chr4 (26-121)||(16629714-16629810)
chr4 (26-120)||(7846533-7846627)
chr4 (214-311)||(14600654-14600752)
chr4 (49-135)||(2829714-2829800)
chr4 (77-123)||(53946120-53946166)
[»] scaffold0005 (2 HSPs)
scaffold0005 (30-105)||(216843-216917)
scaffold0005 (214-311)||(216626-216724)
[»] scaffold0265 (1 HSPs)
scaffold0265 (26-136)||(11479-11589)
[»] chr6 (10 HSPs)
chr6 (24-130)||(26168552-26168658)
chr6 (26-123)||(791003-791100)
chr6 (26-135)||(18706122-18706232)
chr6 (26-135)||(18712057-18712167)
chr6 (26-135)||(16321475-16321585)
chr6 (26-135)||(16333623-16333733)
chr6 (26-74)||(30657937-30657985)
chr6 (26-135)||(24505184-24505294)
chr6 (26-61)||(26168644-26168679)
chr6 (35-126)||(17824274-17824366)
[»] scaffold1468 (1 HSPs)
scaffold1468 (26-123)||(1506-1603)
[»] scaffold0034 (1 HSPs)
scaffold0034 (26-123)||(7607-7704)
[»] scaffold0018 (3 HSPs)
scaffold0018 (26-123)||(54819-54916)
scaffold0018 (26-123)||(58771-58868)
scaffold0018 (26-123)||(60199-60296)
[»] scaffold0231 (1 HSPs)
scaffold0231 (26-94)||(16354-16421)
[»] scaffold0014 (2 HSPs)
scaffold0014 (27-126)||(114326-114425)
scaffold0014 (26-135)||(146858-146968)
[»] scaffold0141 (1 HSPs)
scaffold0141 (26-135)||(18926-19036)
[»] chr3 (6 HSPs)
chr3 (26-135)||(12376719-12376828)
chr3 (26-123)||(51978541-51978638)
chr3 (26-135)||(20293200-20293310)
chr3 (26-120)||(20744849-20744944)
chr3 (26-60)||(10508439-10508473)
chr3 (26-93)||(19828018-19828086)
[»] scaffold0049 (1 HSPs)
scaffold0049 (33-135)||(4522-4624)
[»] scaffold0031 (1 HSPs)
scaffold0031 (26-121)||(111559-111655)
[»] scaffold0122 (1 HSPs)
scaffold0122 (26-120)||(23344-23439)
[»] scaffold0706 (1 HSPs)
scaffold0706 (26-135)||(1751-1861)
[»] scaffold0058 (1 HSPs)
scaffold0058 (26-92)||(29076-29143)
[»] scaffold1705 (1 HSPs)
scaffold1705 (26-60)||(1146-1180)
[»] scaffold0553 (1 HSPs)
scaffold0553 (26-117)||(634-726)


Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 31224471 - 31224770
Alignment:
Q  12 ggacatcaaatattcatcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31224471 ggacatcaaatattcatcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatga 31224570  T
Q  112 gtttctgggtttatccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgctagataaagttgtt 211  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31224571 gtttctgggtttatccaatgtgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgctggataaagttgtt 31224670  T
Q  212 tccagatctgcattggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaagatattgtactatatcat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31224671 tccagatctgcattggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaagatattgtactatatcat 31224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 303
Target Start/End: Original strand, 2690043 - 2690318
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| || |||||||||||||||||||||    
T  2690043 catcagaatgttgttatgttcttcatcagaatgttgatgttcatcatgacaatcagttgggttcatcatttatgagtgtatgatgagtttctgggtttat 2690142  T
Q  126 ccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgctagataaagttgtttccagatctgcatt 225  Q
    ||||||||||| | |||| ||| |||||| || ||||| |||| |  |||||||||||  | |||||||||||  ||||| || |||||| || ||||||    
T  2690143 ccaatgcgtgcctcatgattttctgggcattattcatgtgttgtgtcttttgcacaaacattagaaagttgctgcataaactt-tttccaaatatgcatt 2690241  T
Q  226 ggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaagatattgtac 303  Q
    |||||||||||| || | ||| |||||| || || | ||||||| ||||||||||||||||| |||| | ||||||||    
T  2690242 ggattgtgtgcaggatagagaatagtggttctgc-atcttcaggtccatgcttttgggagatttgcatggtattgtac 2690318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 5759676 - 5759566
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||     
T  5759676 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggtttg 5759577  T
Q  125 tccaatgcgtg 135  Q
    |||||||||||    
T  5759576 tccaatgcgtg 5759566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 11430452 - 11430549
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||||||||||||| | ||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||    
T  11430452 catcagaatgttgttgtgttcttcatcagaatgttgatatccatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttt 11430549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 20531104 - 20531214
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||| ||| |    
T  20531104 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgagttca 20531203  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  20531204 tccaatacgtg 20531214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 23014789 - 23014899
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||| ||||||||||||||||||||||||||| ||| | ||||| |||   ||||| ||||||||||| | ||||||   |||||||||||||| ||||    
T  23014789 catcataatgttgttgtgttcttcatcagaatgtttggtattcatgatgttcttcatctgggttcatcaatgatgaatatctgatgagtttctggattta 23014888  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  23014889 tccaatacgtg 23014899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 31991435 - 31991527
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttct 117  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  ||||||||||||    
T  31991435 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttct 31991527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 20851755 - 20851721
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt 60  Q
    |||||||||||||||||||||||||||||||||||    
T  20851755 catcagaatgttgttgtgttcttcatcagaatgtt 20851721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 31999025 - 31999121
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggt 121  Q
    ||||||||| ||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   ||| |||  ||||||||||||||||    
T  31999025 catcagaattttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatggatgtctgatgagtttctgggt 31999121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 33773913 - 33774023
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    |||||||||||||||||| | |||||||||||| ||||| ||||| |||   ||||| |||| ||||||   ||||| |  ||||||||||||||||  |    
T  33773913 catcagaatgttgttgtgatattcatcagaatgtttgatattcatgatgttcttcatctgggatcatcaaggatgaaagtctgatgagtttctgggtcaa 33774012  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  33774013 tccaatacgtg 33774023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 26 - 304
Target Start/End: Complemental strand, 21109561 - 21109285
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||  ||||| |||||| |||||| |||| || |||||||||||| ||||||||    
T  21109561 catcagaacgttgttgtgttctttgtcagaatgttgatgttcatcatgatcttcatctgggtttatcattgatgagtgtatgatgagtttcagggtttat 21109462  T
Q  126 ccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgctagataaagttgtttccagatctgcatt 225  Q
    |||||| |||| | |||||||| ||||||||||||||||||||  | ||||| ||| |  ||||||||||||| |||||||||  ||||| |||||||||    
T  21109461 ccaatgtgtgcctgatgaatttatgggcaatactcatgagttgttacttttgtacatatatcagaaagttgctggataaagtt-attccatatctgcatt 21109363  T
Q  226 ggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaagatattgtact 304  Q
    ||||| |||||  |||| ||| |||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21109362 ggatt-tgtgcgggagagagaatagtggttctgcaatcttcaggcccaagcttttgggagatatgcaagatattgtact 21109285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 279
Target Start/End: Original strand, 69861 - 70113
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaa-tgatgagtttctgggttta 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||   |||||||| |||||||     
T  69861 catcagaatgttgttatgttcttcatcagaatgttgatgttcatcatggtcttcatttgggttcatcatttatgaattaacacatgagtttatgggtttg 69960  T
Q  125 tccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgctagataaagttgtttccagatctgcat 224  Q
    ||  ||||||    ||||| ||| |||||||||  ||| | | |  | |||| |||| |  ||| || |||||| ||||||||||   ||||||||||||    
T  69961 tcatatgcgtttcatatgattttctgggcaatatccataattagtaacttttccacatacatcataatgttgctggataaagttg-caccagatctgcat 70059  T
Q  225 tggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttt 279  Q
    ||||||||||||| |||| ||| ||||||||| || | |||||||||||||||||    
T  70060 tggattgtgtgcaggagagagaatagtggatctgc-atcttcaggcccatgcttt 70113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 3605707 - 3605816
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||   ||||| | ||||||||| | |||||||  |||||||||||| |||||||    
T  3605707 catcagaatgttgttgtgttcttcatcagaatgttgatattcatgatgttcttcatctaggttcatcaatgatgaatgtctgatgagtttctaggtttat 3605806  T
Q  126 ccaatgcgtg 135  Q
    ||||| ||||    
T  3605807 ccaatacgtg 3605816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 24238773 - 24238872
Alignment:
Q  27 atcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaa-tgatgagtttctgggtttat 125  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||  |||||||||||| ||||||||||   |||||||| |||||||||    
T  24238773 atcagaatgttgtcgtgttcttcatcaaaatgttgatgttcatca-gacattcacctgggttcatcatatatgaatgaacacatgagtttatgggtttat 24238871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 22687455 - 22687564
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||| |||   ||||| ||||||||||||| |||||||  ||||||||||||||||| |    
T  22687455 catcagaatgttgt-gtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcattgatgaatgtttgatgagtttctgggttca 22687553  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  22687554 tccaatacgtg 22687564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 24238977 - 24239076
Alignment:
Q  212 tccagatctgcattggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaagatattgtactatatcat 311  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| |||| |||||||| ||||||| |  |||| |||||||||| ||| | |||||||    
T  24238977 tccagatctgcattggattgtgtgtaggagagagagtagtggatctgcaatcttcaggctcatgcttctatgagacatgcaagatactgttcaatatcat 24239076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 12570862 - 12570757
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||||||||||||| ||| | ||||| |||   ||||| ||||||||||| | |||||||  |||||||||||| ||| ||    
T  12570862 catcagaatgttgctgtgttcttcatcagaatgtttggtattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctaggtcta 12570763  T
Q  125 tccaat 130  Q
    ||||||    
T  12570762 tccaat 12570757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 45191114 - 45191018
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggt 121  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  ||||||||||||||||    
T  45191114 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctgggt 45191018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 37862801 - 37862911
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    |||||||||||||||||||||||||| |||||| ||||| ||| | |||   ||||| | |||||||||   |||||||  ||||||||||||||||  |    
T  37862801 catcagaatgttgttgtgttcttcattagaatgtttgatattcctgatgttcttcatctaggttcatcaaggatgaatgtctgatgagtttctgggtcca 37862900  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  37862901 tccaatacgtg 37862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 574542 - 574508
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt 60  Q
    ||||||||||||| |||||||||||||||||||||    
T  574542 catcagaatgttgatgtgttcttcatcagaatgtt 574508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 7e-43; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 30 - 253
Target Start/End: Complemental strand, 22956860 - 22956637
Alignment:
Q  30 agaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatccaa 129  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||  ||||| |||||||||||||||| | || ||||||||||||| |||||||||||    
T  22956860 agaacgttgttgtgttcttcattagaatgttgatgtttatcatgatcttcatctgggttcatcatttataagtgtatgatgagtttctaggtttatccaa 22956761  T
Q  130 tgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgc-tagataaagttgtttccagatctgcattgga 228  Q
    || |||| |||||| ||| | |||| || ||||| |||| |  |||||||||||  || ||| ||||| | |||||||||  ||||||||||||||||||    
T  22956760 tgtgtgccttatgatttttttggcattattcatgtgttgtgtcttttgcacaaacatctgaatgttgcttggataaagtt-attccagatctgcattgga 22956662  T
Q  229 ttgtgtgcatgagaaagagtagtgg 253  Q
    ||||||||| |||| ||| ||||||    
T  22956661 ttgtgtgcaggagagagaatagtgg 22956637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 21793020 - 21792910
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||   ||||| ||||||||||||| ||||||| ||||||||||||||||||| |    
T  21793020 catcagaatgttgttgtgttcttcataagaatgttgatgtttatgatgttcttcatctgggttcatcattgatgaatgtatgatgagtttctgggtttct 21792921  T
Q  126 ccaatgcgtgc 136  Q
     ||||||||||    
T  21792920 tcaatgcgtgc 21792910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 37012268 - 37012159
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||||    
T  37012268 catcagaatgttgccgtgttcttcatcagattgttgatgttcatgatgttcttcatctgggttcatcaatgatgaatgtttgatgagtttctgggtttat 37012169  T
Q  126 ccaatgcgtg 135  Q
    ||||| ||||    
T  37012168 ccaatacgtg 37012159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 21821220 - 21821330
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||   ||||| ||||||||||||| ||||||  || |||||||||||||||| |    
T  21821220 catcagaatgttgttgtgttcttcatcagaatgttaatgtttatgatgttcttcatctgggttcatcattgatgaatttattatgagtttctgggtttgt 21821319  T
Q  126 ccaatgcgtgc 136  Q
     ||||| ||||    
T  21821320 tcaatgtgtgc 21821330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 4950802 - 4950693
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||| ||    ||||| || |||||||| | ||||||| ||||||||||||||||||| |    
T  4950802 catcagaatgttgatgtgttcttcatcaaaatgttgatattcatgatattcttcatctgagttcatcaatgatgaatgtatgatgagtttctgggtttgt 4950703  T
Q  126 ccaatgcgtg 135  Q
    ||||||||||    
T  4950702 ccaatgcgtg 4950693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 49333622 - 49333525
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||    
T  49333622 catcagaatgttgttgtgttcttcatcaaaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttt 49333525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 18096718 - 18096815
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||   ||||| || |||||||| | ||||||| ||||||||||||| |||||    
T  18096718 catcagaatgttgttgtgttcttcatcaaaatgttgatattcatgatgttcttcatttgagttcatcaatgatgaatgtatgatgagtttctcggttt 18096815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 25823236 - 25823333
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| |||   ||||||||||||||||| | |||||||  |||||||||||| |||||    
T  25823236 catcagaatcttgttgttttcttcatcagaatgttgatattcatgatgttcttcatatgggttcatcaatgatgaatgtctgatgagtttctaggttt 25823333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 26193232 - 26193332
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||| ||||||||||| | ||||||| |||||||||||||||||  ||    
T  26193232 catcagaatgttgttgtgttcttcatcagaatgttgatgttc---------ttcatctgggttcatcaatgatgaatgtatgatgagtttctgggtccat 26193322  T
Q  126 ccaatgcgtg 135  Q
    ||||| ||||    
T  26193323 ccaatacgtg 26193332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 22961166 - 22961061
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| |||   ||||| ||||||||||| | |||||||  |||||| ||||| | ||| |    
T  22961166 catcataatgttgttgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgattttctagatttgt 22961067  T
Q  126 ccaatg 131  Q
    ||||||    
T  22961066 ccaatg 22961061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 20317826 - 20317921
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctggg 120  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||| | |||||||||   |||||||  |||||||||||||||    
T  20317826 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttattcatctaggttcatcaaggatgaatgtctgatgagtttctggg 20317921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 25039197 - 25039295
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| ||||||||||| | |||||||  |||||||||| |||||||    
T  25039197 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttttgggttt 25039295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 25044409 - 25044499
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagttt 115  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||    
T  25044409 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagttt 25044499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 20328308 - 20328376
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||  |||||| |||||||||||    
T  20328308 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttattcatctgggttcatca 20328376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 20314704 - 20314603
Alignment:
Q  30 agaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatcca 128  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| | ||||||||    |||||||  ||||||||| ||||||| |||||    
T  20314704 agaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctaggttcatccaggatgaatgtctgatgagttcctgggttcatcca 20314605  T
Q  129 at 130  Q
    ||    
T  20314604 at 20314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 27066366 - 27066298
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||    
T  27066366 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatca 27066298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 20309146 - 20309036
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaat-gttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||||||||||||  ||||| ||||| |||   ||||| ||||||||||    |||||||  ||||||||| || |||| |    
T  20309146 catcagaatgttgctgtgttcttcatcagaatctttgatattcattatgttcttcatctgggttcatccaggatgaatgtctgatgagttcctaggttca 20309047  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  20309046 tccaatacgtg 20309036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 9007212 - 9007104
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  9007212 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcaagatcttcatttgggttcatcatatatgaatgtatgatgagtttctgggtttat 9007113  T
Q  126 ccaatgcgt 134  Q
    |||||||||    
T  9007112 ccaatgcgt 9007104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 12491607 - 12491510
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||   ||||| ||||||||||| | ||||||| ||||||||||||| |||||    
T  12491607 catcagaatgttgctgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtatgatgagtttctaggttt 12491510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 12515404 - 12515318
Alignment:
Q  37 tgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||||||||||||||||| ||||| |||   ||||| ||||||||||| | ||||||| ||||||||||||| |||||    
T  12515404 tgttgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtatgatgagtttctaggttt 12515318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 19586052 - 19585957
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctggg 120  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  |||||||||||||||    
T  19586052 catcagaatgttgttgtgttcttcatcagaatgattgatattcatgatgttcttcatttgggttcatcaaggatgaatgtctgatgagtttctggg 19585957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 10415977 - 10415867
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| | ||||||||||||||||||| | | ||||| |||   ||||| | ||||||||| | |||||||  |||||||||||||||||||    
T  10415977 catcagaatgttgctatgttcttcatcagaatgtttggtattcatgatgttcttcatctaggttcatcaatgatgaatgtctgatgagtttctgggttta 10415878  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  10415877 tccaatacgtg 10415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 24540605 - 24540701
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggt 121  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||   |||||||||||||||    
T  24540605 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtcagatgagtttctgggt 24540701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 45553479 - 45553383
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggt 121  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||  |||   ||||| |||||||||||   |||||||   |||||||||||||||    
T  45553479 catcagaatgttgttgtgttcttcatcagaatgtttgatattcacgatgttcttcatctgggttcatcaaggatgaatgtcagatgagtttctgggt 45553383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 12491366 - 12491312
Alignment:
Q  248 tagtggatcagcaaacttcaggcccatgcttttgggagatatgcaagatattgtac 303  Q
    ||||||||| |||| |||||||||||||| |||| ||||||||||||||| |||||    
T  12491366 tagtggatctgcaatcttcaggcccatgc-tttgagagatatgcaagatactgtac 12491312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 12770356 - 12770258
Alignment:
Q  85 ggttcatcatttatgaatgaatgatgagtttctgggtttatccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaa 183  Q
    ||||||||||||| || || ||||||| ||| ||||||| | |||||||||| ||||   ||| ||||||||| ||||| |||| |  |||||||||||    
T  12770356 ggttcatcatttacgagtgtatgatgaatttatgggttttttcaatgcgtgccttattgttttctgggcaatattcatgtgttgtgtcttttgcacaaa 12770258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 9007009 - 9006973
Alignment:
Q  220 tgcattggattgtgtgcatgagaaagagtagtggatc 256  Q
    |||||||||||||||||| |||| |||||||||||||    
T  9007009 tgcattggattgtgtgcaggagagagagtagtggatc 9006973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 26 - 255
Target Start/End: Original strand, 21483786 - 21484016
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||| | ||||||| ||||||||||| |||||||||||||||||||||    
T  21483786 catcagaatgttgttgtgttcttcatcaaaatgttgatgttcattatgatcttcatctaggttcattatttatgaatgtatgatgagtttctgggtttat 21483885  T
Q  126 ccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtca-gaaagttgc-tagataaagttgtttccagatctgca 223  Q
    |||||| |||| |||| | ||| || ||  || ||||| ||||  | ||| |||||||  ||| ||| ||| | | |||||||||| ||||| |||||||    
T  21483886 ccaatgtgtgccttataactttttgagctttattcatgtgttgtaactttggcacaaacatcaggaatgttacatggataaagttg-ttccaaatctgca 21483984  T
Q  224 ttggattgtgtgcatgagaaagagtagtggat 255  Q
    |||||||||||||| |||  ||||||||||||    
T  21483985 ttggattgtgtgcaagagggagagtagtggat 21484016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 20897222 - 20897116
Alignment:
Q  30 agaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatccaa 129  Q
    |||||||||||||||||||||| |||||| ||||||| || |||  |||||| |||||||||| || ||||||| ||||||||||||||| ||| | |||    
T  20897222 agaatgttgttgtgttcttcataagaatgatgatgtttatgatgttattcatctgggttcatctttgatgaatgtatgatgagtttctggatttgttcaa 20897123  T
Q  130 tgcgtgc 136  Q
    |||||||    
T  20897122 tgcgtgc 20897116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 205461 - 205555
Alignment:
Q  29 cagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||   ||||| ||||||||||| | |||||||  | |||||||||| |||||    
T  205461 cagaatgttgttgtgttcttcatcagaatgttgatattcatgatgttcttcatttgggttcatcaatgatgaatgtcttatgagtttctaggttt 205555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 34130468 - 34130563
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctggg 120  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  |||||||||||||||    
T  34130468 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctggg 34130563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 20904514 - 20904624
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||||||||||||||||||||| ||| || ||  | |||   ||||| | ||||||||||| ||||||| ||||||| ||||||||||| |    
T  20904514 catcagaatgttgttgtgttcttcatcagaacgttaatttttttgatgtttttcatctaggttcatcattgatgaatgtatgatgaatttctgggtttgt 20904613  T
Q  126 ccaatgcgtgc 136  Q
     ||||| ||||    
T  20904614 tcaatgtgtgc 20904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 19780861 - 19780784
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatg 103  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||   ||||| | ||||||||| | |||||||    
T  19780861 catcagaatgttgctgtgttcttcatcagaatgttgatattcatgatgttcttcatctaggttcatcaatgatgaatg 19780784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 27274160 - 27274265
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  ||||||||| ||||||  |    
T  27274160 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagttcctgggtcca 27274259  T
Q  125 tccaat 130  Q
    ||||||    
T  27274260 tccaat 27274265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 37298793 - 37298861
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||    
T  37298793 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatca 37298861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 4037958 - 4038068
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| ||||||||||    |||||||  ||||||||| ||| ||| |    
T  4037958 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatccaggatgaatgtctgatgagttcctgagttca 4038057  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  4038058 tccaatacgtg 4038068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 31917089 - 31917055
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt 60  Q
    |||||||||||||||||||||||||||||||||||    
T  31917089 catcagaatgttgttgtgttcttcatcagaatgtt 31917055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 20764630 - 20764521
Alignment:
Q  27 atcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    |||||||||||| |||||||| |||  ||||||| | | ||||| |||   ||||| ||||||||||| | |||||||  |||||||||||| |||||||    
T  20764630 atcagaatgttgctgtgttctgcattggaatgtttggtattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctaggtttat 20764531  T
Q  126 ccaatgcgtg 135  Q
    ||||| ||||    
T  20764530 ccaatacgtg 20764521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 13571659 - 13571727
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||    
T  13571659 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatca 13571727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 22173231 - 22173299
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||    
T  22173231 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatca 22173299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 37817875 - 37817807
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| |||   ||||| |||||||||||    
T  37817875 catcagaatgttgttgtgttcttcattagaatgtttgatattcatgatgttcttcatctgggttcatca 37817807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 49 - 237
Target Start/End: Original strand, 28545 - 28733
Alignment:
Q  49 catcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatccaatgcgtgctttatgaatttg 148  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| | |||     
T  28545 catcagaatgttgatgttcattatgatcttcatctgggttcatcatttatgaatgtaagatgagtttctgggtttatccaatgcgtgccttataactttt 28644  T
Q  149 tgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagtt-gctagataaagttgtttccagatctgcattggattgtgtgca 237  Q
    ||||   || ||||| |||| || ||| |||||||  |||||| |||   |||||||||||| ||||| || ||||||||||||||||||    
T  28645 tgggatttattcatgtgttgtgactttggcacaaacatcagaatgttaaatagataaagttg-ttccaaatttgcattggattgtgtgca 28733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 15696 - 15439
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||   ||||| |||||||||||||||||| || ||||||| ||||||||||| |    
T  15696 catcagaatgttgttgtgttcttcatcagaatgttcattttcatcatgttcttcatctgggttcatcatttatgagtgtatgatgaatttctgggtttgt 15597  T
Q  126 ccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagtcagaaagttgctagataaagttg------tttccagatc 219  Q
     ||||| |||| ||||   ||| ||| ||||| ||||| |||| |  |||||||||||  |||||| ||||   ||||||||||      | |||| |||    
T  15596 tcaatgtgtgccttattgttttctggacaatattcatgtgttgtgtcttttgcacaaacatcagaatgttgagtgataaagttgaaaagttatccaaatc 15497  T
Q  220 tgcattggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgctt 278  Q
    ||||||| |   |||||| |||| ||||||| ||||| || ||||||||||||||||||    
T  15496 tgcattgaacaatgtgcaggagagagagtagcggatctgc-aacttcaggcccatgctt 15439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 198513 - 198679
Alignment:
Q  87 ttcatcatttatgaatgaatgatgagtttctgggtttatccaatgcgtgctttatgaatttgtgggcaatactcatgagttgcgagttttgcacaaaagt 186  Q
    |||||||||||||| || ||||||||||||| ||||||||||||| |||| |||||| ||| |||||| || ||||| |||| |  |||||||||||  |    
T  198513 ttcatcatttatgagtgtatgatgagtttctaggtttatccaatgtgtgcgttatgattttctgggcattattcatgtgttgtgtcttttgcacaaacat 198612  T
Q  187 cagaaagttgc-tagataaagttgtttccagatctgcattggattgtgtgcatgagaaagagtagtgg 253  Q
    ||||| ||||| | |||||||||  ||||||||||||||||||||||||||| |||| ||| ||||||    
T  198613 cagaatgttgcttggataaagtt-attccagatctgcattggattgtgtgcaggagagagaatagtgg 198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 197180 - 197241
Alignment:
Q  30 agaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcat 91  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||  ||||  |||||||||    
T  197180 agaatgttgttgtgttcttcattagaatattgatgttcatcatgatcttcacctgggttcat 197241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 44889017 - 44888908
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||||    
T  44889017 catcagaatgttgctgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggtttat 44888918  T
Q  126 ccaatgcgtg 135  Q
    ||||| ||||    
T  44888917 ccaatacgtg 44888908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 14600461 - 14600535
Alignment:
Q  30 agaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||    
T  14600461 agaatgttgttgtgttcttcatcagaatgttgatgttcatca-gacattcatttgggtttatcatgtatgaatgaa 14600535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 16210953 - 16211050
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||    
T  16210953 catcagaatgttgatgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttt 16211050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 16397199 - 16397102
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||||||||||||| |  || |||   ||||| ||||||||||| | ||||| |  ||||||||||||||||||    
T  16397199 catcagaatgttgttgtgttcttcatcagaatgttgatatctatgatgttcttcatctgggttcatcaatgatgaaagtctgatgagtttctgggttt 16397102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 16629810 - 16629714
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggt 121  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  ||||||||||||||||    
T  16629810 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctgggt 16629714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 7846533 - 7846627
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctggg 120  Q
    |||||| |||||||||||||||||||||||||||| || ||||| |||   ||||| ||||||| ||| | |||||||   ||||||||||||||    
T  7846533 catcagcatgttgttgtgttcttcatcagaatgttaatattcatgatgttcttcatctgggttcttcaatgatgaatgtcagatgagtttctggg 7846627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 311
Target Start/End: Original strand, 14600654 - 14600752
Alignment:
Q  214 cagatctgcattggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaa-gatattgtactatatcat 311  Q
    |||||||||||||||||||| | | |||| | ||||||||||| ||||  ||||| | ||||||| |  ||||||||||| ||||||||||| ||||||    
T  14600654 cagatctgcattggattgtgcgtaggagagatagtagtggatctgcaatattcagtctcatgcttctatgagatatgcaaggatattgtactgtatcat 14600752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 2829800 - 2829714
Alignment:
Q  49 catcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatccaatgcgtg 135  Q
    ||||| ||||||||||||||| |||   ||||| | ||||||||| | |||||||  |||||||||| | |||||||||||| ||||    
T  2829800 catcataatgttgatgttcatgatgttcttcatctaggttcatcaatgatgaatgtttgatgagtttatcggtttatccaatacgtg 2829714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 53946120 - 53946166
Alignment:
Q  77 ttcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||||||| | |||||||  ||||||||||||||||||    
T  53946120 ttcatatgggttcatcaatgatgaatgtctgatgagtttctgggttt 53946166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 216917 - 216843
Alignment:
Q  30 agaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||    
T  216917 agaatgttgttgtgttcttcatcagaatgttgatgttcatca-gacattcatttgggtttatcatgtatgaatgaa 216843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 311
Target Start/End: Complemental strand, 216724 - 216626
Alignment:
Q  214 cagatctgcattggattgtgtgcatgagaaagagtagtggatcagcaaacttcaggcccatgcttttgggagatatgcaa-gatattgtactatatcat 311  Q
    |||||||||||||||||||| | | |||| | ||||||||||| ||||  ||||| | ||||||| |  ||||||||||| ||||||||||| ||||||    
T  216724 cagatctgcattggattgtgcgtaggagagatagtagtggatctgcaatattcagtctcatgcttctatgagatatgcaaggatattgtactgtatcat 216626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 11589 - 11479
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||   ||||| ||||||||||||| ||||||  || |||||||||||||||| |    
T  11589 catcagaatgttgttgtgttcttcatcagaatgttaatgtttatgatgttcttcatctgggttcatcattgatgaatttattatgagtttctgggtttgt 11490  T
Q  126 ccaatgcgtgc 136  Q
     ||||| ||||    
T  11489 tcaatgtgtgc 11479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 26168658 - 26168552
Alignment:
Q  24 ttcatcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| |||   ||||| |||||||||||   |||||||  |||||||||||||| |||    
T  26168658 ttcatcagaatgttgctgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctggcttt 26168559  T
Q  124 atccaat 130  Q
    |||||||    
T  26168558 atccaat 26168552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 791003 - 791100
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||   ||||| || |||||||| | |||||||  ||||||||||||||||||    
T  791003 catcagaatgttgttgtgttcttcatcagaatgttgatattcatgatgttcttcatctgagttcatcaatgatgaatgtctgatgagtttctgggttt 791100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 18706122 - 18706232
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| |||||||||||||| |||||| | | ||||| |||   ||||| ||||||||||| | |||||||  |||||||||||||||||||    
T  18706122 catcagaatgttgctgtgttcttcatcaaaatgtttggtattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttta 18706221  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  18706222 tccaatacgtg 18706232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 18712057 - 18712167
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| |||||||||||||| |||||| | | ||||| |||   ||||| ||||||||||| | |||||||  |||||||||||||||||||    
T  18712057 catcagaatgttgctgtgttcttcatcaaaatgtttggtattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttta 18712156  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  18712157 tccaatacgtg 18712167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 16321585 - 16321475
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||| | ||||||||||||||||||||| ||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||| |    
T  16321585 catcagaatgtagctgtgttcttcatcagaatgtttgatattcatgatgttcttcatttgggttcatcaatgatgaatgtctgatgagtttctgggttca 16321486  T
Q  125 tccaatgcgtg 135  Q
    | |||| ||||    
T  16321485 ttcaatacgtg 16321475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 16333733 - 16333623
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||| | ||||||||||||||||||||| ||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||| |    
T  16333733 catcagaatgtagctgtgttcttcatcagaatgtttgatattcatgatgttcttcatttgggttcatcaatgatgaatgtctgatgagtttctgggttca 16333634  T
Q  125 tccaatgcgtg 135  Q
    | |||| ||||    
T  16333633 ttcaatacgtg 16333623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 30657937 - 30657985
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatga 74  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  30657937 catcagaatgttgctgtgttcttcatcagaatgttgatgttcatgatga 30657985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 24505184 - 24505294
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   || ||||  | ||||||||||||||  |    
T  24505184 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggataaatgtctaatgagtttctgggtcca 24505283  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  24505284 tccaatacgtg 24505294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 26168679 - 26168644
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttg 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  26168679 catcagaatgttgttgtgttcttcatcagaatgttg 26168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 17824366 - 17824274
Alignment:
Q  35 gttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatc 126  Q
    |||| ||||||||||||||||||||| | | ||||| |||   ||||| ||||||||||| | |||||||  |||||||||||||| ||||||    
T  17824366 gttgctgtgttcttcatcagaatgtttggtattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctggatttatc 17824274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1468 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1468
Description:

Target: scaffold1468; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 1603 - 1506
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||   ||||| ||||||||||| | |||||||  ||||||||||||||||||    
T  1603 catcagaatgttgttgtgttcttcatcaaaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttt 1506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 7704 - 7607
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||   ||||| |||||||||||   ||||||| |||||||||||||||||||    
T  7704 catcagaatgttgttgtgttcttcatcaaaatgttgatattcatgatgttcttcatctgggttcatcaaagatgaatgtatgatgagtttctgggttt 7607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 54916 - 54819
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||| | |||||||||||| ||||||||||||||| |||   ||||| | ||||||||||| ||||||||||||||||||||| |||||    
T  54916 catcagaatgttgctatgttcttcatcaaaatgttgatgttcatgatgttcttcatctaggttcatcattgatgaatgaatgatgagtttcttggttt 54819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 58868 - 58771
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||| | |||||||||||| ||||||||||||||| |||   ||||| | ||||||||||| ||||||||||||||||||||| |||||    
T  58868 catcagaatgttgctatgttcttcatcaaaatgttgatgttcatgatgttcttcatctaggttcatcattgatgaatgaatgatgagtttctaggttt 58771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 60296 - 60199
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    ||||||||||||| | |||||||||||| ||||||||||||||| |||   ||||| | ||||||||||| ||||||||||||||||||||| |||||    
T  60296 catcagaatgttgctatgttcttcatcaaaatgttgatgttcatgatgttcttcatctaggttcatcattgatgaatgaatgatgagtttctaggttt 60199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 16354 - 16421
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcat 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  16354 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatca-gacattcatctaggttcatcat 16421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 114326 - 114425
Alignment:
Q  27 atcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatc 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||   ||||| |||||| ||||   |||||||  |||||||||||||||||||||    
T  114326 atcagaatgttgttgtgttcttcatcagaatgttgatattcatgatgttcttcatctgggtttatcaaggatgaatgtctgatgagtttctgggtttatc 114425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 146968 - 146858
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt-gatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||| ||    ||||| ||||||||||| | |||||||  ||||||||||||||||| |    
T  146968 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatattcttcatctgggttcatcaatgatgaatgtctgatgagtttctgggttca 146869  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  146868 tccaatacgtg 146858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 19036 - 18926
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||   ||||| | ||||||||| | |||||||  ||||||||||||||||| |    
T  19036 catcagaatgttgttgtgttcttcatcagaatgtttgatattcatgatgttcttcatctaggttcatcaatgatgaatgtctgatgagtttctgggttca 18937  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  18936 tccaatacgtg 18926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 12376828 - 12376719
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttat 125  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||| |||   ||||| |||||| |||| | |||||||  |||||||||||||||||| |    
T  12376828 catcagaatgttgctgtgttcttcatcagaatgctgatattcatgatgttcttcatttgggttaatcaatgatgaatgtctgatgagtttctgggtttgt 12376729  T
Q  126 ccaatgcgtg 135  Q
     |||||||||    
T  12376728 tcaatgcgtg 12376719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 51978541 - 51978638
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttt 123  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||   ||||| ||||||||||| | |||||||  |||| |||||||||||||    
T  51978541 catcagaatgttgttgtgttcttcatcaaaatgttgatattcatgatgttcttcatctgggttcatcaatgatgaatgtctgataagtttctgggttt 51978638  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 20293310 - 20293200
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||||||||||||| ||| | ||||| | |   ||||| | ||||||||| | |||||||  ||||||||||||||||||     
T  20293310 catcagaatgttgatgtgttcttcatcagaatgtttggtattcatgaagttcttcatctaggttcatcaatgatgaatgtctgatgagtttctgggtttg 20293211  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  20293210 tccaatacgtg 20293200  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 20744849 - 20744944
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctggg 120  Q
    ||||||||| ||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  |||||||||||||||    
T  20744849 catcagaattttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctggg 20744944  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 10508439 - 10508473
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt 60  Q
    |||||||||||||||||||||||||||||||||||    
T  10508439 catcagaatgttgttgtgttcttcatcagaatgtt 10508473  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 19828018 - 19828086
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatca 93  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||    
T  19828018 catcagaatgttgatgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatca 19828086  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 4624 - 4522
Alignment:
Q  33 atgttgttgtgttcttcatcagaatgttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggtttatccaatgc 132  Q
    ||||||||||||||||||||||||||| ||| ||||  |||   ||||| ||| ||||||| | |||||||  |||||||||| ||||||| ||||||||    
T  4624 atgttgttgtgttcttcatcagaatgtcgatattcaagatgttcttcatttggattcatcaatgatgaatgtctgatgagtttttgggtttgtccaatgc 4525  T
Q  133 gtg 135  Q
    |||    
T  4524 gtg 4522  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 111559 - 111655
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggt 121  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  ||||||||||||||||    
T  111559 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctgggt 111655  T

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Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 23439 - 23344
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctggg 120  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  |||||||||||||||    
T  23439 catcagaatgttgctgtgttcttcatcagaatgtttgatattcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctggg 23344  T

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Target: scaffold0706 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 1751 - 1861
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttctgggttta 124  Q
    ||||||||||||| ||||||||| ||||||||| ||||| || || |||   ||||| |||||||||||   |||||||  ||||||||||||||||  |    
T  1751 catcagaatgttgctgtgttctttatcagaatgtttgatatttatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttctgggtcca 1850  T
Q  125 tccaatgcgtg 135  Q
    |||||| ||||    
T  1851 tccaatacgtg 1861  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 29076 - 29143
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatc 92  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||| |||   ||||| ||||||||||    
T  29076 catcagaatgttgttgtgttcttcatcaaaatgtttgatattcatgatgttcttcatctgggttcatc 29143  T

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Target: scaffold1705 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1705
Description:

Target: scaffold1705; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 1180 - 1146
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatgtt 60  Q
    ||||||||||||| |||||||||||||||||||||    
T  1180 catcagaatgttgctgtgttcttcatcagaatgtt 1146  T

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Target: scaffold0553 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 634 - 726
Alignment:
Q  26 catcagaatgttgttgtgttcttcatcagaatg-ttgatgttcatcatgacattcatatgggttcatcatttatgaatgaatgatgagtttct 117  Q
    ||||||||||||| | |||||||||| |||||| ||||| ||||| |||   ||||| |||||||||||   |||||||  ||||||||||||    
T  634 catcagaatgttgctctgttcttcataagaatgtttgattttcatgatgttcttcatctgggttcatcaaggatgaatgtctgatgagtttct 726  T

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