View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6692_low_26 (Length: 315)

Name: NF6692_low_26
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6692_low_26
NF6692_low_26
[»] chr6 (38 HSPs)
chr6 (1-194)||(27629956-27630149)
chr6 (1-194)||(27272830-27273023)
chr6 (70-188)||(28162485-28162603)
chr6 (70-188)||(13522323-13522441)
chr6 (70-188)||(33374506-33374624)
chr6 (40-193)||(20160499-20160652)
chr6 (40-193)||(22172179-22172332)
chr6 (109-176)||(4525153-4525220)
chr6 (70-188)||(8892560-8892678)
chr6 (109-176)||(29501270-29501337)
chr6 (70-188)||(8903795-8903913)
chr6 (109-159)||(27007576-27007626)
chr6 (255-300)||(27629853-27629898)
chr6 (106-159)||(30558298-30558351)
chr6 (109-176)||(27044254-27044321)
chr6 (109-159)||(4546066-4546116)
chr6 (109-159)||(4724425-4724475)
chr6 (109-159)||(17025126-17025176)
chr6 (109-159)||(26777909-26777959)
chr6 (109-159)||(28207306-28207356)
chr6 (109-158)||(16944310-16944359)
chr6 (112-193)||(22477521-22477602)
chr6 (109-158)||(27484981-27485030)
chr6 (109-158)||(29572877-29572926)
chr6 (109-146)||(34463656-34463693)
chr6 (112-176)||(29549345-29549409)
chr6 (32-159)||(4757548-4757675)
chr6 (109-159)||(4772861-4772911)
chr6 (112-146)||(16673994-16674028)
chr6 (34-188)||(24304871-24305025)
chr6 (109-159)||(26116701-26116751)
chr6 (109-159)||(27360292-27360342)
chr6 (109-159)||(27450635-27450685)
chr6 (109-146)||(3695927-3695964)
chr6 (92-193)||(22935125-22935226)
chr6 (92-193)||(23857570-23857671)
chr6 (92-188)||(13299204-13299300)
chr6 (92-188)||(15424570-15424666)
[»] chr4 (19 HSPs)
chr4 (1-189)||(15227647-15227835)
chr4 (1-188)||(1900034-1900221)
chr4 (1-188)||(15285235-15285422)
chr4 (46-176)||(24112484-24112614)
chr4 (70-188)||(24460912-24461030)
chr4 (46-176)||(34189279-34189409)
chr4 (106-159)||(14098420-14098473)
chr4 (106-159)||(31126857-31126910)
chr4 (32-188)||(14664823-14664979)
chr4 (109-158)||(40105978-40106027)
chr4 (112-176)||(14763626-14763690)
chr4 (112-176)||(36344834-36344898)
chr4 (112-159)||(19373146-19373193)
chr4 (112-146)||(39850508-39850542)
chr4 (92-193)||(17013865-17013966)
chr4 (112-193)||(54833275-54833356)
chr4 (109-193)||(5005752-5005836)
chr4 (109-193)||(6569735-6569819)
chr4 (109-193)||(21969583-21969667)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-188)||(20171-20358)
scaffold0124 (92-188)||(30303-30399)
[»] chr2 (30 HSPs)
chr2 (1-188)||(21703460-21703647)
chr2 (70-188)||(31891624-31891742)
chr2 (70-188)||(3784481-3784599)
chr2 (70-188)||(27118515-27118633)
chr2 (70-188)||(34156838-34156956)
chr2 (70-187)||(34303600-34303717)
chr2 (70-188)||(16163426-16163544)
chr2 (106-159)||(16829666-16829719)
chr2 (106-159)||(16891762-16891815)
chr2 (109-193)||(27777070-27777154)
chr2 (109-193)||(27816837-27816921)
chr2 (109-193)||(37925356-37925440)
chr2 (109-159)||(39889925-39889975)
chr2 (109-146)||(9350335-9350372)
chr2 (109-146)||(12586664-12586701)
chr2 (109-158)||(19416828-19416877)
chr2 (109-158)||(22926357-22926406)
chr2 (32-193)||(27434738-27434899)
chr2 (109-146)||(27803555-27803592)
chr2 (109-158)||(31876144-31876193)
chr2 (109-158)||(34861543-34861592)
chr2 (109-158)||(37686238-37686287)
chr2 (109-158)||(37701503-37701552)
chr2 (109-193)||(261059-261143)
chr2 (112-146)||(39052169-39052203)
chr2 (112-146)||(40233365-40233399)
chr2 (109-193)||(11635483-11635567)
chr2 (109-193)||(11641672-11641756)
chr2 (92-188)||(23128865-23128961)
chr2 (112-176)||(37375027-37375091)
[»] chr1 (5 HSPs)
chr1 (1-188)||(20460866-20461053)
chr1 (70-188)||(20340642-20340760)
chr1 (109-159)||(51638084-51638134)
chr1 (109-158)||(10962536-10962585)
chr1 (109-158)||(28584847-28584896)
[»] chr7 (22 HSPs)
chr7 (1-182)||(16041086-16041267)
chr7 (1-180)||(16450199-16450378)
chr7 (70-188)||(31088657-31088775)
chr7 (70-188)||(45733292-45733410)
chr7 (94-176)||(5159375-5159457)
chr7 (32-193)||(16503571-16503732)
chr7 (32-193)||(16518607-16518768)
chr7 (109-176)||(4145331-4145398)
chr7 (112-193)||(5147531-5147612)
chr7 (109-158)||(9618519-9618568)
chr7 (109-158)||(24592767-24592816)
chr7 (109-158)||(26275320-26275369)
chr7 (109-158)||(26320095-26320144)
chr7 (112-193)||(26435128-26435209)
chr7 (109-158)||(26670140-26670189)
chr7 (109-193)||(11441428-11441512)
chr7 (109-157)||(31124779-31124827)
chr7 (34-193)||(5127785-5127944)
chr7 (112-146)||(3445165-3445199)
chr7 (112-146)||(26485982-26486016)
chr7 (112-146)||(26538111-26538145)
chr7 (109-159)||(31564624-31564674)
[»] chr3 (39 HSPs)
chr3 (7-188)||(16626854-16627035)
chr3 (70-188)||(17994132-17994250)
chr3 (70-187)||(4625736-4625853)
chr3 (46-176)||(32438922-32439052)
chr3 (109-176)||(5596729-5596796)
chr3 (1-188)||(18530117-18530304)
chr3 (94-176)||(4893026-4893108)
chr3 (70-188)||(5652179-5652297)
chr3 (34-176)||(8211494-8211636)
chr3 (94-176)||(22387938-22388020)
chr3 (34-188)||(29149106-29149260)
chr3 (106-159)||(17985336-17985389)
chr3 (106-158)||(18225016-18225068)
chr3 (109-193)||(22871220-22871304)
chr3 (109-193)||(22886279-22886363)
chr3 (109-193)||(36997435-36997519)
chr3 (109-193)||(47023281-47023365)
chr3 (109-176)||(4347047-4347114)
chr3 (109-176)||(28021106-28021173)
chr3 (109-159)||(6542854-6542904)
chr3 (109-158)||(5013540-5013589)
chr3 (109-158)||(5609703-5609752)
chr3 (109-146)||(20577255-20577292)
chr3 (109-158)||(24327987-24328036)
chr3 (109-158)||(28339130-28339179)
chr3 (112-193)||(29665331-29665412)
chr3 (109-158)||(31964854-31964903)
chr3 (109-158)||(50134452-50134501)
chr3 (109-193)||(11110707-11110791)
chr3 (112-176)||(18277415-18277479)
chr3 (112-176)||(18292716-18292780)
chr3 (112-176)||(18308017-18308081)
chr3 (109-176)||(5466813-5466880)
chr3 (109-159)||(4416744-4416794)
chr3 (112-146)||(48465746-48465780)
chr3 (112-146)||(51781842-51781876)
chr3 (112-146)||(51796931-51796965)
chr3 (109-146)||(18242555-18242592)
chr3 (109-193)||(28116303-28116387)
[»] chr8 (15 HSPs)
chr8 (70-188)||(44562932-44563050)
chr8 (70-188)||(19659305-19659423)
chr8 (70-188)||(9354453-9354571)
chr8 (106-193)||(31490014-31490101)
chr8 (109-159)||(3329817-3329867)
chr8 (112-188)||(18710456-18710532)
chr8 (109-176)||(31354391-31354458)
chr8 (109-159)||(12093031-12093081)
chr8 (109-159)||(29829180-29829230)
chr8 (32-193)||(16283239-16283400)
chr8 (109-158)||(19208659-19208708)
chr8 (109-158)||(28362254-28362303)
chr8 (109-158)||(33258590-33258639)
chr8 (112-193)||(19286335-19286416)
chr8 (92-188)||(16277404-16277500)
[»] chr5 (39 HSPs)
chr5 (51-188)||(22888291-22888428)
chr5 (1-178)||(25198800-25198977)
chr5 (70-188)||(11325634-11325752)
chr5 (70-188)||(13184852-13184970)
chr5 (70-188)||(13440698-13440816)
chr5 (70-188)||(33877087-33877205)
chr5 (1-188)||(23891974-23892161)
chr5 (1-193)||(30168237-30168429)
chr5 (94-176)||(33292389-33292471)
chr5 (106-159)||(18375648-18375701)
chr5 (106-159)||(33516229-33516282)
chr5 (109-193)||(31431304-31431388)
chr5 (109-176)||(32599688-32599755)
chr5 (109-159)||(6874178-6874228)
chr5 (109-159)||(28960034-28960084)
chr5 (109-159)||(34616397-34616447)
chr5 (109-159)||(37358891-37358941)
chr5 (109-159)||(37671728-37671778)
chr5 (109-158)||(2510927-2510976)
chr5 (112-193)||(3789405-3789486)
chr5 (109-158)||(5637786-5637835)
chr5 (109-158)||(9317327-9317376)
chr5 (109-158)||(12132031-12132080)
chr5 (109-158)||(15759094-15759143)
chr5 (109-158)||(26480268-26480317)
chr5 (109-158)||(29967303-29967352)
chr5 (109-158)||(30029291-30029340)
chr5 (109-158)||(30151894-30151943)
chr5 (109-158)||(31826656-31826705)
chr5 (109-158)||(37754844-37754893)
chr5 (109-158)||(37771236-37771285)
chr5 (109-193)||(18500950-18501034)
chr5 (109-193)||(43078125-43078209)
chr5 (94-193)||(24969885-24969984)
chr5 (109-159)||(13325080-13325130)
chr5 (112-146)||(40473801-40473835)
chr5 (92-193)||(41674568-41674669)
chr5 (109-193)||(9548745-9548829)
chr5 (109-193)||(15658962-15659046)
[»] scaffold0260 (1 HSPs)
scaffold0260 (70-188)||(2965-3083)
[»] scaffold0336 (1 HSPs)
scaffold0336 (109-176)||(8099-8166)
[»] scaffold2173 (2 HSPs)
scaffold2173 (255-300)||(90-135)
scaffold2173 (163-194)||(1-32)
[»] scaffold0237 (1 HSPs)
scaffold0237 (106-159)||(15269-15322)
[»] scaffold0089 (2 HSPs)
scaffold0089 (32-188)||(29553-29709)
scaffold0089 (32-193)||(40374-40535)
[»] scaffold0038 (1 HSPs)
scaffold0038 (109-159)||(7804-7854)
[»] scaffold0496 (1 HSPs)
scaffold0496 (109-158)||(73-122)
[»] scaffold0350 (1 HSPs)
scaffold0350 (109-158)||(7579-7628)
[»] scaffold0159 (2 HSPs)
scaffold0159 (109-158)||(9406-9455)
scaffold0159 (109-158)||(19882-19931)
[»] scaffold0144 (1 HSPs)
scaffold0144 (109-146)||(26554-26591)


Alignment Details
Target: chr6 (Bit Score: 166; Significance: 8e-89; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 27630149 - 27629956
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  27630149 aagaaggaaacagaggttggaatggtatcctcgggagcaggtcagtctacggctactgtcgcccctgttaatgttgctcagctacctccaccatacccct 27630050  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 194  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27630049 gtacaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 27629956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 27273023 - 27272830
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||  | || |||||| |||||||||||||||||||||||||||||||||||||| |||    
T  27273023 aagaaggaaacagaggttggaatggtatcctctggagcaggtcagactacagctactgtcgcccctgttaatgctgctcagctacctccaccatactcct 27272924  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattgt 194  Q
    ||| ||| |||||||| |||||||||| ||| || |||||| || | |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  27272923 atgtaccgtattctcaacatccattctacccgccattttactattagtatcctttgccatcaggaccacctcaagtacctgtgaatgctattgt 27272830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 28162485 - 28162603
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||| | ||||| ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||    
T  28162485 aatgctgctcagctacctccatcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 28162584  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  28162585 ctcaggtacccgttaatgc 28162603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 13522441 - 13522323
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  13522441 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13522342  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  13522341 ctcaggtacccgttaatgc 13522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 33374624 - 33374506
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  33374624 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33374525  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  33374524 ctcaggtacccgttaatgc 33374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 20160499 - 20160652
Alignment:
Q  40 ggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgtttt 139  Q
    ||||| |||| ||||||| | ||||||||||||||| ||||  |||||||||||||||  | |||||  || ||||| ||||| ||||  ||||| ||||    
T  20160499 ggtcaatccatggctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccatttt 20160598  T
Q  140 accatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||| |||||| | ||| | || | ||||||||||||||| ||||| ||||    
T  20160599 accatcagtatcctctaccaccgggtcaacctcaggtacccgttaatgccattg 20160652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 22172332 - 22172179
Alignment:
Q  40 ggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgtttt 139  Q
    ||||| |||| ||||||| | ||||||||||||||| ||||  |||||||||||||||  | |||||  || ||||| ||||| ||||  ||||| ||||    
T  22172332 ggtcaatccatggctactgttgcccctgttaatgctactcaattacctccaccatacctgtttgcacattactctcaacatcctttctatccaccatttt 22172233  T
Q  140 accatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||| |||||| | ||| | || | ||||||||||||||| ||||| ||||    
T  22172232 accatcagtatcctctaccaccgggtcaacctcaggtacccgttaatgccattg 22172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 4525153 - 4525220
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| | |||||||||    
T  4525153 tattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 4525220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 8892678 - 8892560
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  8892678 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtattctttgccatcgggtcaac 8892579  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  8892578 ctcaggtacccgttaatgc 8892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 29501270 - 29501337
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  29501270 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 29501337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 8903913 - 8903795
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||  ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  8903913 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatctcttctttccaccattctatcatcagtattctttgccatcgggtcaac 8903814  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  8903813 ctcaggtacccgttaatgc 8903795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 27007576 - 27007626
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  27007576 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgcca 27007626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 27629898 - 27629853
Alignment:
Q  255 ttttgctaggcctacttttcctccaatcccggttttgtatgctgat 300  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  27629898 ttttgctaggcctacttttcctccaatcccgatgttgtatgctgat 27629853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 30558351 - 30558298
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  30558351 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 30558298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 27044254 - 27044321
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  27044254 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 27044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 4546116 - 4546066
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  4546116 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 4546066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 4724475 - 4724425
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  4724475 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 4724425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 17025126 - 17025176
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  17025126 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 17025176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 26777959 - 26777909
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  26777959 tattctcagcatcctttcttcccaccgttttatcatcagtaccctttgcca 26777909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 28207306 - 28207356
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  28207306 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 28207356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 16944359 - 16944310
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  16944359 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 16944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 22477602 - 22477521
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||| ||||| || || ||| | |||||||||||||| || | ||||||||||||||| ||||| ||||    
T  22477602 tctcagcatcccttctttccaccattctatcattagtatcctttgccatcgggtcaacctcaggtacccgttaatgcaattg 22477521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 27484981 - 27485030
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  27484981 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 27485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 29572877 - 29572926
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  29572877 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29572926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 34463693 - 34463656
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34463693 tattctcagcatcctttcttcccaccgttttaccatca 34463656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 29549345 - 29549409
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  29549345 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 29549409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 4757548 - 4757675
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| || | ||||||| |||| ||| | ||||| |||||  | |||||  ||||||| |||   || |||||||| ||||| ||||||||    
T  4757548 ccggagccggtcaatcaatggctactgtcgctcctatcaatgcagctcaaatgcctccgtcatacccatatatgccgtattctcaacatccgttcttccc 4757647  T
Q  132 accgttttaccatcaatatcctttgcca 159  Q
    ||||||||| ||||| || |||||||||    
T  4757648 accgttttatcatcagtaccctttgcca 4757675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 4772861 - 4772911
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  4772861 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 4772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 16673994 - 16674028
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  16673994 tctcagcatccgttcttcccaccgttttaccatca 16674028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 24305025 - 24304871
Alignment:
Q  34 ggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccac 133  Q
    ||||| ||||| |||| ||||||| |||| ||| | |||||||| ||  | |||||  ||||||| ||||  || |||||||||||||| ||||| || |    
T  24305025 ggagccggtcaatccatggctactgtcgctcctatcaatgctgcccaaatgcctccgtcatacccatatgtgccgtattctcagcatcccttctttccgc 24304926  T
Q  134 cgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    | ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  24304925 cattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 24304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 26116751 - 26116701
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||| | ||||||||||||||||| ||||| || |||||||||    
T  26116751 tattctcagcattcgttcttcccaccgttttatcatcagtaccctttgcca 26116701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 27360342 - 27360292
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  27360342 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27360292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 27450685 - 27450635
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  27450685 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 27450635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 3695927 - 3695964
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3695927 tattctcagcatcctttcttcccaccgttttatcatca 3695964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 22935226 - 22935125
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctat 191  Q
    ||||||| ||||| || |||||||| ||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||    
T  22935226 catacccatatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaat 22935127  T
Q  192 tg 193  Q
    ||    
T  22935126 tg 22935125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 23857671 - 23857570
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctat 191  Q
    ||||||| ||||| || |||||||| ||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||    
T  23857671 catacccatatgcgccgtattctcaacatcccttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgtcaatgcaat 23857572  T
Q  192 tg 193  Q
    ||    
T  23857571 tg 23857570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 13299300 - 13299204
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||| ||||| || |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  13299300 catacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 13299204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 15424666 - 15424570
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||| ||||| || |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  15424666 catacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 15424570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 15227647 - 15227835
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||||| ||||| |||| ||||||| | |||||| |||||||||| ||| |||||||  | ||||| |    
T  15227647 aagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgt 15227746  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgct 189  Q
    |||| | ||| ||||||||||| ||||| ||||| || || |||||||||||||||||||| || | ||||||||||||||| ||||||    
T  15227747 atgcgcaatactctcagcatcccttctttccaccattctatcatcaatatcctttgccatcgggtcaacctcaggtacccgttaatgct 15227835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1900034 - 1900221
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||||| ||||| |||| ||||||| | |||||| |||||||||| ||| |||||||  | ||||| |    
T  1900034 aagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccat 1900133  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  1900134 atgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 1900221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 15285422 - 15285235
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| ||  | ||||||||  ||||||| ||||| |||| ||||||| | |||||| |||||||||| ||| ||||||||   ||||| |    
T  15285422 aagaaagaaacagaagtatggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagttacctccattgtacccat 15285323  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||| | ||||| || | ||||||||| ||||| |||||    
T  15285322 atgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctctaccatcgggtcaacctcaggtgcccgttaatgc 15285235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 24112484 - 24112614
Alignment:
Q  46 tccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatc 145  Q
    |||| ||||||| | || ||||| |||||||||||| | || ||  | ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||    
T  24112484 tccaaggctactgttgctcctgtcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatc 24112583  T
Q  146 aatatcctttgccatcaggaccacctcaggt 176  Q
    | || ||||||||| | || | |||||||||    
T  24112584 agtaccctttgccaccgggccaacctcaggt 24112614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 24461030 - 24460912
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  24461030 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 24460931  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  24460930 ctcaggtacccgttaatgc 24460912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 34189409 - 34189279
Alignment:
Q  46 tccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatc 145  Q
    |||| ||||||| |||| ||| | |||||||||||| | || ||  | ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||    
T  34189409 tccaaggctactgtcgctcctatcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatc 34189310  T
Q  146 aatatcctttgccatcaggaccacctcaggt 176  Q
    | || ||||||||| | || | |||||||||    
T  34189309 agtaccctttgccaccgggccaacctcaggt 34189279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 14098420 - 14098473
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  14098420 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 14098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 31126910 - 31126857
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  31126910 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 31126857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 14664823 - 14664979
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| | |||||||| ||  | |||||  ||||||| |||||||| |||||||||||||| ||||| ||    
T  14664823 ccggagctggtcaatccatggctactgttgctcctatcaatgctgcccaaatgcctccgtcatacccatatgcaccgtattctcagcatcctttctttcc 14664922  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
     || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  14664923 gccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 14664979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 40106027 - 40105978
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  40106027 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 40105978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 14763690 - 14763626
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  14763690 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 14763626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 36344898 - 36344834
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| ||||||| ||||||||| ||||| |||||||||||| | || | |||||||||    
T  36344898 tctcagcatccgttcttcctaccgttttatcatcagtatcctttgccaccgggccaacctcaggt 36344834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 19373146 - 19373193
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  19373146 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 19373193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 39850508 - 39850542
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  39850508 tctcagcatccgttcttcccaccgttttaccatca 39850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 17013865 - 17013966
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctat 191  Q
    ||||||| ||||| || |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||    
T  17013865 catacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaat 17013964  T
Q  192 tg 193  Q
    ||    
T  17013965 tg 17013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 54833275 - 54833356
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||| ||| | || | ||||||||| || || ||||| ||||    
T  54833275 tctcagcatccgttcttcccaccgttttatcatcagtaccctttaccaccgggccaacctcaggttcctgtcaatgccattg 54833356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 5005752 - 5005836
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5005752 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5005836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 6569735 - 6569819
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  6569735 tattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgcaattg 6569819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 21969583 - 21969667
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| |||||||| |||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  21969583 tattctcagcatcctttcttcccgccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 21969667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 20171 - 20358
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||||| ||||| |||| ||||||| | |||||| |||||||||| ||| |||||||  | ||||| |    
T  20171 aagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccat 20270  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| ||||| ||||||||||| ||||| ||| | || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  20271 atgcgccatactctcagcatcccttctttccatcattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 20358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 30303 - 30399
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||| ||||| || |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  30303 catacccatatgcgccgtattctcagcatcccttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 30399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21703647 - 21703460
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||||| ||||| |||| ||||||| | |||||| ||||||||||  || |||||||  | ||||| |    
T  21703647 aagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcctagttacctccgtcgtacccat 21703548  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  21703547 atgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgttaatgc 21703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 31891742 - 31891624
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||||| ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||    
T  31891742 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 31891643  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  31891642 ctcaggtacccgttaatgc 31891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 3784481 - 3784599
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  3784481 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 3784580  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  3784581 ctcaggtacccgttaatgc 3784599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 27118515 - 27118633
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | |||||  |||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  27118515 aatgctgctcagctacctccgtcgtacccgcatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 27118614  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  27118615 ctcaggtacccgttaatgc 27118633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 34156838 - 34156956
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  34156838 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34156937  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  34156938 ctcaggtacccgttaatgc 34156956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 34303717 - 34303600
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  34303717 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 34303618  T
Q  170 ctcaggtacccgtgaatg 187  Q
    ||||||||||||| ||||    
T  34303617 ctcaggtacccgttaatg 34303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 16163426 - 16163544
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| ||| |||||||||| || | ||    
T  16163426 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtattctttgccatcgggtcaac 16163525  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  16163526 ctcaggtacccgttaatgc 16163544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 16829719 - 16829666
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  16829719 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 16829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 16891762 - 16891815
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  16891762 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 16891815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 27777070 - 27777154
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||||||||| || ||  ||||| |||| | |||||| || ||||| ||||| ||||    
T  27777070 tattctcagcatcctttcttcccaccgttttaccatcagtaccccctgccaccaggtcaacctcaagtgcccgtcaatgcaattg 27777154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 27816837 - 27816921
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||||||||| || ||  ||||| |||| | |||||| || ||||| ||||| ||||    
T  27816837 tattctcagcatcctttcttcccaccgttttaccatcagtaccccctgccaccaggtcaacctcaagtgcccgtcaatgcaattg 27816921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 37925356 - 37925440
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  37925356 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattg 37925440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 39889925 - 39889975
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  39889925 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 39889975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 9350372 - 9350335
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9350372 tattctcagcatcctttcttcccaccgttttaccatca 9350335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 12586664 - 12586701
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12586664 tattctcagcatcctttcttcccaccgttttaccatca 12586701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 19416877 - 19416828
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19416877 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19416828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 22926406 - 22926357
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  22926406 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 22926357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 27434899 - 27434738
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| |||||||||| ||  | |||||  | ||||| ||||| || || ||||||||||| ||||| ||    
T  27434899 ccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttcc 27434800  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||| || || ||||| || ||||||||| | || | |||||| |||||||| ||||| ||||    
T  27434799 accattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgcaattg 27434738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 27803555 - 27803592
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  27803555 tattctcagcatcctttcttcccaccgttttaccatca 27803592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 31876144 - 31876193
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31876144 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31876193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 34861543 - 34861592
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  34861543 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 34861592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 37686287 - 37686238
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37686287 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37686238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 37701552 - 37701503
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37701552 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37701503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 261143 - 261059
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  261143 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 261059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 39052203 - 39052169
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  39052203 tctcagcatccgttcttcccaccgttttaccatca 39052169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 40233365 - 40233399
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  40233365 tctcagcatccgttcttcccaccgttttaccatca 40233399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 11635567 - 11635483
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  11635567 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11635483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 11641756 - 11641672
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  11641756 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 11641672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 23128961 - 23128865
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||| ||||| || |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  23128961 catacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 23128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 37375027 - 37375091
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| |||||||| |||||||| ||||| || ||||||||| | || | |||||||||    
T  37375027 tctcagcatccgttcttcccgccgttttatcatcagtaccctttgccaccgggccaacctcaggt 37375091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 20460866 - 20461053
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||| ||| || || ||||||||  ||||||| ||||| |||| ||||||||| |||||| |||||||||| ||| ||||||| || ||||| |    
T  20460866 aagaaagaaatagaagtagggatggtatctgccggagccggtcaatccatggctactattgcccctattaatgctgcccagttacctccgccgtacccgt 20460965  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| | ||| ||||||||||| ||||| ||||| || || |||||||||||| | ||||| || | ||||||||||||||| |||||    
T  20460966 atgcgcaatactctcagcatcctttctttccaccattctatcatcaatatcctctaccatcgggtcaacctcaggtacccgttaatgc 20461053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 20340760 - 20340642
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||||| || || | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  20340760 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 20340661  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  20340660 ctcaggtacccgtcaatgc 20340642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 51638084 - 51638134
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  51638084 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 51638134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 10962536 - 10962585
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  10962536 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 10962585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 28584847 - 28584896
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28584847 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28584896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16041086 - 16041267
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||||| ||||| |||| ||||||| | |||||| |||||||||| ||| |||||||  | ||||| |    
T  16041086 aagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccat 16041185  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgt 182  Q
    |||| ||||| ||||||||||| ||||| ||||| || || ||||| ||||||||| |||| || | |||||||||||||||    
T  16041186 atgcgccatactctcagcatcccttctttccaccattctatcatcagtatcctttgtcatcgggtcaacctcaggtacccgt 16041267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16450378 - 16450199
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||| | || || ||||||||  ||||||| ||||| ||||  |||||| | |||||| |||||||||| ||| |||||||  | ||||| |    
T  16450378 aagaaagaaacaaaagtagggatggtatctgccggagccggtcaatccatagctactgttgcccctattaatgctgcccagttacctccgtcgtacccgt 16450279  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtaccc 180  Q
    | || |  || ||||||||||| ||||| ||||| ||||| ||||| |||||||||||||| || | |||||||||||||    
T  16450278 acgcgcagtactctcagcatcccttctttccaccattttatcatcagtatcctttgccatcgggtcaacctcaggtaccc 16450199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 31088775 - 31088657
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  31088775 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 31088676  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  31088675 ctcaggtacccgttaatgc 31088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 45733292 - 45733410
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  45733292 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 45733391  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  45733392 ctcaggtacccgttaatgc 45733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 5159375 - 5159457
Alignment:
Q  94 tacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  5159375 tacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 5159457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 16503732 - 16503571
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| |||||||||| ||  | |||||  ||||||| ||||| || || ||||||||||| ||||| ||    
T  16503732 ccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttcc 16503633  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
     || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||    
T  16503632 gccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 16503571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 16518768 - 16518607
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| |||||||||| ||  | |||||  ||||||| ||||| || || ||||||||||| ||||| ||    
T  16518768 ccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcatacccatatgcgccgtactctcagcatcctttctttcc 16518669  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
     || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||    
T  16518668 gccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 16518607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 4145398 - 4145331
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  4145398 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 4145331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 5147612 - 5147531
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5147612 tctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 5147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 9618519 - 9618568
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9618519 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9618568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 24592816 - 24592767
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  24592816 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 24592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 26275369 - 26275320
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26275369 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26275320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 26320144 - 26320095
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26320144 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26320095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 26435128 - 26435209
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  26435128 tctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 26435209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 26670189 - 26670140
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26670189 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 11441428 - 11441512
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  11441428 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 11441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 31124779 - 31124827
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgc 157  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||    
T  31124779 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgc 31124827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 5127785 - 5127944
Alignment:
Q  34 ggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccac 133  Q
    ||||| ||||| |||| ||||||| | || ||| | ||||| |||||  | |||||  ||||||| ||||  || |||||||||||||| ||||| || |    
T  5127785 ggagccggtcaatccatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttctttccgc 5127884  T
Q  134 cgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    | ||||| ||||| |||||| ||||| | || | |||||| |||||||| ||||| ||||    
T  5127885 cattttatcatcagtatcctctgccaccgggtcaacctcaagtacccgttaatgcaattg 5127944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 3445165 - 3445199
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  3445165 tctcagcatccgttcttcccaccgttttaccatca 3445199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 26486016 - 26485982
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  26486016 tctcagcatccgttcttcccaccgttttaccatca 26485982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 26538145 - 26538111
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  26538145 tctcagcatccgttcttcccaccgttttaccatca 26538111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 31564674 - 31564624
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  31564674 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 31564624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 16627035 - 16626854
Alignment:
Q  7 gaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcac 106  Q
    |||||||| || || ||||||||  ||||||| ||||| |||| ||||||| | |||||| |||||||||| ||| |||||||  | ||||| |||||||    
T  16627035 gaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccgtatgcac 16626936  T
Q  107 catattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
     ||| ||||||||||| ||||| |||||||| || ||||| |||||| | ||||| || | ||||| ||||||||| |||||    
T  16626935 aatactctcagcatcccttctttccaccgttctatcatcagtatcctctaccatcgggtcaacctccggtacccgttaatgc 16626854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 17994250 - 17994132
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  17994250 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 17994151  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  17994150 ctcaggtacccgttaatgc 17994132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 187
Target Start/End: Original strand, 4625736 - 4625853
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  4625736 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattatatcatcagtatcctttgccatcgggtcaac 4625835  T
Q  170 ctcaggtacccgtgaatg 187  Q
    ||||||||||||| ||||    
T  4625836 ctcaggtacccgttaatg 4625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 32438922 - 32439052
Alignment:
Q  46 tccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatc 145  Q
    |||| ||||||| | || ||||| |||||||||||| | || ||  | ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||    
T  32438922 tccaaggctactgttgctcctgtcaatgctgctcagtttcccccgtcctacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatc 32439021  T
Q  146 aatatcctttgccatcaggaccacctcaggt 176  Q
    | || ||||||||| | || | |||||||||    
T  32439022 agtaccctttgccaccgggccaacctcaggt 32439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 5596796 - 5596729
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  5596796 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 5596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 18530117 - 18530304
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||| |  |||| |||| ||||||| |  ||||| |||||||||| ||| |||||||| | ||||| |    
T  18530117 aagaaagaaacagaagtagggatggtatctgccggaactagtcaatccatggctactgttacccctattaatgctgcccagttacctccatcgtacccgt 18530216  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||| | ||||| || | |||||| || ||||| |||||    
T  18530217 atgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctctaccatcgggtcaacctcaagtgcccgttaatgc 18530304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 4893026 - 4893108
Alignment:
Q  94 tacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  4893026 tacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 4893108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 5652179 - 5652297
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||| ||||| ||| || | ||    
T  5652179 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcgtttgcaatcgggtcaac 5652278  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  5652279 ctcaggtacccgttaatgc 5652297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 8211494 - 8211636
Alignment:
Q  34 ggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccac 133  Q
    ||||| ||||| |||| ||||||| | || ||| | ||||| |||||  | |||||  ||||||| ||||| || || ||||||||||| ||||||||||    
T  8211494 ggagccggtcaatccatggctactgttgctcctatcaatgcagctcaaatgcctccgtcatacccatatgcgccgtactctcagcatccgttcttcccac 8211593  T
Q  134 cgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||| ||||| || ||||||||| | || | |||||||||    
T  8211594 cgttttatcatcagtaccctttgccaccgggccaacctcaggt 8211636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 22388020 - 22387938
Alignment:
Q  94 tacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||| ||||||||||| ||||||||||| ||||||||| ||||||| ||||| || ||||||||| | || | |||||||||    
T  22388020 tacccttatgcaccatactctcagcatccgttcttcccatcgttttatcatcagtaccctttgccaccgggccaacctcaggt 22387938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 188
Target Start/End: Complemental strand, 29149260 - 29149106
Alignment:
Q  34 ggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccac 133  Q
    ||||| ||||| |||| ||||||||| || ||| | ||||| || ||  | |||||  ||||||| ||||  || |||||||||||||| ||||||||||    
T  29149260 ggagccggtcaatccatggctactattgctcctatcaatgcagcccaaatgcctccgtcatacccatatgtgccgtattctcagcatcctttcttcccac 29149161  T
Q  134 cgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||| ||||| || ||||||||| | || | |||||| || ||||| |||||    
T  29149160 cgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgttaatgc 29149106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 17985389 - 17985336
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  17985389 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 17985336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 18225016 - 18225068
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  18225016 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 18225068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 22871304 - 22871220
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| |||| |  ||||| || ||||| ||||| ||||    
T  22871304 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaatgcaattg 22871220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 22886363 - 22886279
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| |||| |  ||||| || ||||| ||||| ||||    
T  22886363 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccaggccagcctcaagtgcccgtcaatgcaattg 22886279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 36997519 - 36997435
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | ||||||||| ||||| ||||| ||||    
T  36997519 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccacccggccaacctcaggtgcccgtcaatgcaattg 36997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 47023281 - 47023365
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | ||||||||| ||||| ||||| ||||    
T  47023281 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaggtgcccgtcaatgcaattg 47023365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 4347114 - 4347047
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  4347114 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 4347047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 28021106 - 28021173
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  28021106 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 28021173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 6542904 - 6542854
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  6542904 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 6542854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 5013540 - 5013589
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5013540 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 5609752 - 5609703
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5609752 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5609703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 20577292 - 20577255
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20577292 tattctcagcatcctttcttcccaccgttttaccatca 20577255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 24327987 - 24328036
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  24327987 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 24328036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 28339130 - 28339179
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28339130 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28339179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 29665412 - 29665331
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  29665412 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattg 29665331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 31964903 - 31964854
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31964903 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31964854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 50134501 - 50134452
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  50134501 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 50134452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 11110791 - 11110707
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  11110791 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 11110707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 18277479 - 18277415
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  18277479 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 18277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 18292780 - 18292716
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  18292780 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 18292716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 18308081 - 18308017
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  18308081 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 18308017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 5466813 - 5466880
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||| ||||| ||||| || ||||||||| | || | |||||||||    
T  5466813 tattctcagcatccgttcttcccaccattttatcatcagtaccctttgccacccggccaacctcaggt 5466880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 4416744 - 4416794
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| |||||  | |||||||||    
T  4416744 tattctcagcatccgttcttcccaccgttttatcatcagcaccctttgcca 4416794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 48465746 - 48465780
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  48465746 tctcagcatccgttcttcccaccgttttaccatca 48465780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 51781842 - 51781876
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  51781842 tctcagcatccgttcttcccaccgttttaccatca 51781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 51796931 - 51796965
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  51796931 tctcagcatccgttcttcccaccgttttaccatca 51796965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 18242555 - 18242592
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18242555 tattctcagcatccgttcttcccaccgttttatcatca 18242592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 28116387 - 28116303
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| |||||||| || ||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  28116387 tattctcagcatcctttcttcccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 28116303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 44562932 - 44563050
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||||| ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| |||| ||    
T  44562932 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggacaac 44563031  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  44563032 ctcaggtacccgttaatgc 44563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 19659423 - 19659305
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||||| ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  19659423 aatgctgctcagctacctccgtcgtacccgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 19659324  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  19659323 ctcaggtacccgttaatgc 19659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 9354453 - 9354571
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  9354453 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 9354552  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  9354553 ctcaggtacccgttaatgc 9354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 31490101 - 31490014
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  31490101 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcgattg 31490014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 3329867 - 3329817
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  3329867 tattctcagcatccattcttcccaccgttttatcatcagtaccctttgcca 3329817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 18710456 - 18710532
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | ||||||||| ||||| |||||    
T  18710456 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggttcccgtcaatgc 18710532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 31354391 - 31354458
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  31354391 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 31354458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 12093081 - 12093031
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  12093081 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 12093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 29829180 - 29829230
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  29829180 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 29829230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 16283239 - 16283400
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| |||||||||| ||  | |||||  | ||||| ||||| || || ||||||||||| ||||| ||    
T  16283239 ccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccatatgcgccgtactctcagcatcctttctttcc 16283338  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
     || || || ||| | |||||||||||| |||| | ||||||||||||| | ||||| ||||    
T  16283339 gccattctatcattagtatcctttgccaccaggtcaacctcaggtacccattaatgcaattg 16283400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 19208708 - 19208659
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19208708 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19208659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 28362303 - 28362254
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  28362303 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 28362254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 33258590 - 33258639
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  33258590 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 33258639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 19286335 - 19286416
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||| ||| | || | ||||||||| || || ||||| ||||    
T  19286335 tctcagcatccgttcttcccaccgttttatcatcagtaccctttaccaccgggccaacctcaggttcctgtcaatgccattg 19286416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 16277404 - 16277500
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||| ||||| || |||||||||||||| ||||| || || ||||| ||||| || ||| ||||| | || | |||||| |||||||| |||||    
T  16277404 catacccatatgcgccgtattctcagcatcctttctttccgccattttatcatcagtaccctctgccaccgggtcaacctcaagtacccgttaatgc 16277500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 22888291 - 22888428
Alignment:
Q  51 ggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatat 150  Q
    ||||||| | |||||| |||||||||| ||| |||||||  | ||||| ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |||    
T  22888291 ggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgccatactctcagcatcccttctttccaccattctatcatcagtat 22888390  T
Q  151 cctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    ||||||||||| || | |||||||||| |||| |||||    
T  22888391 cctttgccatcgggtcaacctcaggtaaccgttaatgc 22888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 25198800 - 25198977
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    |||||||||||||| || || ||||||||| ||||||| ||||| |||| ||||||| | || ||| |||||||| | ||  | |||||  | ||||| |    
T  25198800 aagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaattgcctccgtcgtacccat 25198899  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtac 178  Q
    |||| || || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | |||||||||||    
T  25198900 atgcgccgtactctcagcatcctttctttccaccattctatcatcagtatcctttgccatcgggtcaacctcaggtac 25198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 11325634 - 11325752
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||  |||| ||    
T  11325634 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccattgggacaac 11325733  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  11325734 ctcaggtacccgttaatgc 11325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 13184970 - 13184852
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  13184970 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13184871  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  13184870 ctcaggtacccgttaatgc 13184852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 13440816 - 13440698
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  13440816 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 13440717  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  13440716 ctcaggtacccgttaatgc 13440698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 33877087 - 33877205
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||| | ||||| | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  33877087 aatgctgctcagctacctccgtcgtacacgtatgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 33877186  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  33877187 ctcaggtacccgttaatgc 33877205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 23891974 - 23892161
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| |||||||| || || ||||||||  ||||||| | ||| |||| ||||||| | || ||| |||||||||| ||  | |||||  | ||||| |    
T  23891974 aagaaagaaacagaagtagggatggtatctgccggagccgatcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgtacccat 23892073  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
    |||| || || ||||||||||| ||||| ||| | || || ||||| |||||||||||||| || | ||||||||||||||| |||||    
T  23892074 atgcgccgtactctcagcatcctttctttccaacattctatcatcagtatcctttgccatcgggtcaacctcaggtacccgtcaatgc 23892161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 30168237 - 30168429
Alignment:
Q  1 aagaaggaaacagaggttggaatggtatcctccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccct 100  Q
    ||||| ||||| || || || ||||||||  | ||||| ||||| |||| ||||||||| || ||  | ||||| |||||  | |||||  ||||||| |    
T  30168237 aagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctactattgctcccatcaatgcagctcaaatgcctccgtcatacccat 30168336  T
Q  101 atgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||   ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||| || ||||| ||||| ||||    
T  30168337 atatgccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggtcaacctcaagtgcccgtcaatgcaattg 30168429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 33292389 - 33292471
Alignment:
Q  94 tacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    ||||| |||||||| || ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  33292389 tacccttatgcaccgtactctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccaacctcaggt 33292471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 18375701 - 18375648
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  18375701 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 18375648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 33516229 - 33516282
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  33516229 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 33516282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 31431304 - 31431388
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  31431304 tattctcagcatccgttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 31431388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 32599755 - 32599688
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||| | || | |||||||||    
T  32599755 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgccacccggccaacctcaggt 32599688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 6874178 - 6874228
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  6874178 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 6874228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 28960084 - 28960034
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  28960084 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 28960034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 34616397 - 34616447
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  34616397 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 34616447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 37358941 - 37358891
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  37358941 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 37358891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 37671778 - 37671728
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  37671778 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 37671728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 2510927 - 2510976
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  2510927 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 2510976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 3789405 - 3789486
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||| | || |  |||||||| ||||| ||||| ||||    
T  3789405 tctcagcatccgttcttcccaccgttttatcatcagtaccctttgccaccgggccagcctcaggtgcccgtcaatgcaattg 3789486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 5637786 - 5637835
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  5637786 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 5637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 9317327 - 9317376
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9317327 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9317376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 12132031 - 12132080
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  12132031 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 12132080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 15759143 - 15759094
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  15759143 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 15759094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 26480268 - 26480317
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  26480268 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 26480317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 29967352 - 29967303
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  29967352 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 29967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 30029291 - 30029340
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  30029291 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 30029340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 30151894 - 30151943
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  30151894 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 30151943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 31826705 - 31826656
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  31826705 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 31826656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 37754844 - 37754893
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37754844 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37754893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 37771285 - 37771236
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  37771285 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 37771236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 18501034 - 18500950
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  18501034 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 18500950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 43078125 - 43078209
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  43078125 tattctcagcatcctttcttcccaccgttttatcatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 43078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 24969885 - 24969984
Alignment:
Q  94 tacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    ||||| ||||| || |||||||||||||| ||||| || || || || ||||| ||||| |||||| | || | ||||||||||||||| ||||| ||||    
T  24969885 tacccatatgcgccgtattctcagcatcctttctttccgccattctatcatcagtatcccttgccaccgggtcaacctcaggtacccgttaatgcaattg 24969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 13325130 - 13325080
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||| ||||| ||||||||||||||||| ||||| || |||||||||    
T  13325130 tattctcaacatccgttcttcccaccgttttatcatcagtaccctttgcca 13325080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 40473835 - 40473801
Alignment:
Q  112 tctcagcatccattcttcccaccgttttaccatca 146  Q
    ||||||||||| |||||||||||||||||||||||    
T  40473835 tctcagcatccgttcttcccaccgttttaccatca 40473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 41674568 - 41674669
Alignment:
Q  92 catacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctat 191  Q
    ||||||| ||||  || ||| |||||||||| ||||| || || ||||||||||| || ||| ||||| | || |||||||| |||||||| ||||| ||    
T  41674568 catacccatatgtgccgtatgctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtccacctcaagtacccgtcaatgcaat 41674667  T
Q  192 tg 193  Q
    ||    
T  41674668 tg 41674669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 9548829 - 9548745
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||| || || ||||||||||| || ||| ||||| | || | |||||| |||||||| ||||| ||||    
T  9548829 tattctcagcatcctttctttccgccattttaccatcagtaccctctgccaccgggtcaacctcaagtacccgtcaatgcaattg 9548745  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 15659046 - 15658962
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
    |||||||||||||| ||||| || |||||||||||||| || ||| ||||| | || | |||||| || ||||| ||||| ||||    
T  15659046 tattctcagcatcctttctttccgccgttttaccatcagtaccctctgccaccgggtcaacctcaagtgcccgtcaatgcaattg 15658962  T

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Target: scaffold0260 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 3083 - 2965
Alignment:
Q  70 aatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccac 169  Q
    ||||||||||||||||||||  | ||||| || || | ||| ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || | ||    
T  3083 aatgctgctcagctacctccgtcgtacccgtacgcgcaatactctcagcatcccttctttccaccattctatcatcagtatcctttgccatcgggtcaac 2984  T
Q  170 ctcaggtacccgtgaatgc 188  Q
    ||||||||||||| |||||    
T  2983 ctcaggtacccgtcaatgc 2965  T

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Target: scaffold0336 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 8099 - 8166
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgccatcaggaccacctcaggt 176  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||| |||| | |||||||||    
T  8099 tattctcagcatccgttcttcccaccgttttatcatcagtatcctttgccaccaggccaacctcaggt 8166  T

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Target: scaffold2173 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold2173
Description:

Target: scaffold2173; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 90 - 135
Alignment:
Q  255 ttttgctaggcctacttttcctccaatcccggttttgtatgctgat 300  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  90 ttttgctaggcctacttttcctccaatcccgatgttgtatgctgat 135  T

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Target: scaffold2173; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 194
Target Start/End: Original strand, 1 - 32
Alignment:
Q  163 ggaccacctcaggtacccgtgaatgctattgt 194  Q
    ||||||||||||||||||||||||||||||||    
T  1 ggaccacctcaggtacccgtgaatgctattgt 32  T

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Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 15322 - 15269
Alignment:
Q  106 ccatattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  15322 ccatattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 15269  T

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Target: scaffold0089 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 29553 - 29709
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| |||||||||| ||  | |||||| | ||||| ||||| || |||||||||||||| ||||| ||    
T  29553 ccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccatcgtacccgtatgcgccgtattctcagcatcctttctttcc 29652  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgc 188  Q
     || || || ||||| || ||||||||| | || | |||||| |||||||| |||||    
T  29653 gccattctatcatcagtaccctttgccaccgggtcaacctcaagtacccgttaatgc 29709  T

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Target: scaffold0089; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 40535 - 40374
Alignment:
Q  32 ccggagcaggtcattccacggctactatcgcccctgttaatgctgctcagctacctccaccatacccctatgcaccatattctcagcatccattcttccc 131  Q
    ||||||| ||||| |||| ||||||| | || ||| | ||||| || ||  | ||||| || ||||| ||||| || |||||||||||||| ||||| |     
T  40535 ccggagccggtcaatccatggctactgttgctcctatcaatgcagcccaaatgcctccgccgtacccatatgcgccgtattctcagcatcctttctttct 40436  T
Q  132 accgttttaccatcaatatcctttgccatcaggaccacctcaggtacccgtgaatgctattg 193  Q
     || || || ||||| || ||||||||| | || | ||||||||||||||| ||||| ||||    
T  40435 gccattctatcatcagtaccctttgccaccgggtcaacctcaggtacccgtaaatgcaattg 40374  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 7804 - 7854
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcca 159  Q
    |||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  7804 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcca 7854  T

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Target: scaffold0496 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 122 - 73
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  122 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 73  T

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Target: scaffold0350 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 7628 - 7579
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  7628 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 7579  T

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Target: scaffold0159 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 9455 - 9406
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  9455 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 9406  T

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Target: scaffold0159; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 19882 - 19931
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatcaatatcctttgcc 158  Q
    |||||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  19882 tattctcagcatccgttcttcccaccgttttatcatcagtaccctttgcc 19931  T

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Target: scaffold0144 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 26591 - 26554
Alignment:
Q  109 tattctcagcatccattcttcccaccgttttaccatca 146  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26591 tattctcagcatccgttcttcccaccgttttatcatca 26554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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