View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6692_low_27 (Length: 294)

Name: NF6692_low_27
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6692_low_27
NF6692_low_27
[»] chr4 (49 HSPs)
chr4 (1-286)||(52568151-52568436)
chr4 (123-267)||(26329921-26330066)
chr4 (156-283)||(31229293-31229421)
chr4 (123-274)||(52181720-52181872)
chr4 (100-275)||(8408826-8409003)
chr4 (117-244)||(26330005-26330132)
chr4 (123-283)||(5387131-5387292)
chr4 (117-240)||(43098414-43098537)
chr4 (122-282)||(52183392-52183544)
chr4 (117-243)||(22025301-22025426)
chr4 (125-241)||(9320017-9320133)
chr4 (160-270)||(22025095-22025206)
chr4 (122-229)||(41735816-41735923)
chr4 (122-229)||(43098365-43098472)
chr4 (128-278)||(19681203-19681350)
chr4 (126-229)||(2788928-2789031)
chr4 (157-244)||(2788973-2789060)
chr4 (127-235)||(35046437-35046545)
chr4 (181-283)||(52567746-52567849)
chr4 (160-238)||(26329805-26329883)
chr4 (117-267)||(43098181-43098328)
chr4 (122-210)||(19631767-19631855)
chr4 (157-239)||(35046550-35046632)
chr4 (117-210)||(2788789-2788882)
chr4 (169-272)||(8408393-8408497)
chr4 (122-193)||(26329936-26330007)
chr4 (117-244)||(41735752-41735878)
chr4 (125-229)||(2909182-2909286)
chr4 (125-213)||(22025271-22025358)
chr4 (181-275)||(19632212-19632306)
chr4 (159-240)||(36890450-36890533)
chr4 (181-259)||(42116050-42116129)
chr4 (149-229)||(36890502-36890583)
chr4 (186-270)||(36890618-36890703)
chr4 (117-230)||(52865955-52866068)
chr4 (186-229)||(52866367-52866410)
chr4 (245-283)||(30543095-30543133)
chr4 (186-239)||(2508270-2508323)
chr4 (186-278)||(5387584-5387677)
chr4 (122-190)||(52181779-52181847)
chr4 (172-266)||(35023955-35024050)
chr4 (122-193)||(52567747-52567818)
chr4 (123-193)||(8408407-8408477)
chr4 (217-278)||(44915937-44915999)
chr4 (125-190)||(9320077-9320142)
chr4 (231-275)||(19631871-19631916)
chr4 (117-193)||(19632235-19632310)
chr4 (117-193)||(35023745-35023821)
chr4 (126-174)||(35046555-35046603)
[»] chr8 (65 HSPs)
chr8 (126-275)||(9276960-9277109)
chr8 (117-268)||(9770768-9770920)
chr8 (123-278)||(30576632-30576788)
chr8 (122-270)||(36359904-36360053)
chr8 (117-270)||(45017745-45017899)
chr8 (123-283)||(23553359-23553520)
chr8 (100-274)||(9276462-9276639)
chr8 (122-278)||(39701365-39701522)
chr8 (117-289)||(44041249-44041422)
chr8 (122-283)||(39700888-39701050)
chr8 (123-278)||(25730095-25730252)
chr8 (117-283)||(16197027-16197194)
chr8 (117-270)||(29794238-29794392)
chr8 (117-275)||(8713844-8714003)
chr8 (122-283)||(25737107-25737269)
chr8 (125-278)||(25737581-25737736)
chr8 (117-267)||(30576150-30576301)
chr8 (122-230)||(40553260-40553368)
chr8 (123-230)||(11113555-11113662)
chr8 (125-244)||(43422864-43422983)
chr8 (117-244)||(43423100-43423226)
chr8 (126-283)||(31169452-31169609)
chr8 (116-238)||(36360088-36360210)
chr8 (123-230)||(9770565-9770672)
chr8 (181-274)||(13771843-13771937)
chr8 (125-278)||(23553840-23553994)
chr8 (123-274)||(8714330-8714482)
chr8 (117-237)||(40553313-40553433)
chr8 (125-229)||(41190293-41190397)
chr8 (157-278)||(4613778-4613900)
chr8 (117-230)||(14871368-14871482)
chr8 (157-278)||(40552800-40552922)
chr8 (186-278)||(13771425-13771518)
chr8 (117-210)||(29792559-29792652)
chr8 (186-289)||(5358650-5358754)
chr8 (122-230)||(6236250-6236358)
chr8 (150-237)||(39700856-39700943)
chr8 (122-229)||(43422921-43423028)
chr8 (117-238)||(45017934-45018053)
chr8 (117-201)||(36314697-36314781)
chr8 (181-275)||(35433899-35433994)
chr8 (181-267)||(35434313-35434400)
chr8 (181-248)||(36360138-36360205)
chr8 (169-238)||(9770662-9770731)
chr8 (126-266)||(16208674-16208815)
chr8 (181-273)||(34686875-34686968)
chr8 (157-210)||(43423074-43423127)
chr8 (183-283)||(6235793-6235895)
chr8 (183-237)||(9277058-9277112)
chr8 (117-190)||(13771868-13771941)
chr8 (117-193)||(35434328-35434404)
chr8 (181-228)||(23179049-23179096)
chr8 (122-193)||(23553418-23553489)
chr8 (122-193)||(30576658-30576729)
chr8 (181-248)||(36359903-36359970)
chr8 (217-278)||(44040860-44040922)
chr8 (117-194)||(29030175-29030252)
chr8 (104-193)||(44040808-44040896)
chr8 (181-241)||(25737106-25737166)
chr8 (181-241)||(31169555-31169614)
chr8 (181-237)||(39701467-39701523)
chr8 (181-249)||(43423154-43423222)
chr8 (181-243)||(14871416-14871478)
chr8 (193-237)||(9770575-9770619)
chr8 (121-193)||(39701391-39701463)
[»] chr2 (35 HSPs)
chr2 (117-283)||(36196462-36196627)
chr2 (117-283)||(27893519-27893686)
chr2 (103-275)||(31264125-31264301)
chr2 (157-273)||(19080667-19080784)
chr2 (123-268)||(34336039-34336185)
chr2 (108-241)||(30907063-30907196)
chr2 (117-243)||(31263923-31264049)
chr2 (122-238)||(30907137-30907253)
chr2 (117-270)||(30907288-30907440)
chr2 (127-229)||(37542956-37543057)
chr2 (158-248)||(39376401-39376491)
chr2 (158-278)||(11871714-11871835)
chr2 (122-230)||(27893038-27893146)
chr2 (126-241)||(8260392-8260507)
chr2 (186-283)||(20535509-20535608)
chr2 (98-240)||(34336276-34336419)
chr2 (117-242)||(16781049-16781175)
chr2 (173-277)||(15506040-15506145)
chr2 (122-229)||(31263988-31264095)
chr2 (122-229)||(34429684-34429791)
chr2 (123-230)||(41265257-41265364)
chr2 (181-276)||(42117172-42117268)
chr2 (126-195)||(19081055-19081124)
chr2 (157-230)||(20535966-20536039)
chr2 (125-222)||(37543100-37543197)
chr2 (121-229)||(34336227-34336335)
chr2 (186-244)||(30907081-30907139)
chr2 (169-210)||(37543048-37543089)
chr2 (181-244)||(31263927-31263990)
chr2 (186-248)||(19081062-19081124)
chr2 (169-230)||(5116895-5116956)
chr2 (231-283)||(27893138-27893191)
chr2 (117-230)||(39376172-39376284)
chr2 (169-229)||(5116946-5117006)
chr2 (181-252)||(34429683-34429755)
[»] chr6 (37 HSPs)
chr6 (122-283)||(10862545-10862708)
chr6 (126-270)||(32417684-32417829)
chr6 (126-270)||(32423525-32423670)
chr6 (117-283)||(11527535-11527693)
chr6 (126-248)||(16168685-16168807)
chr6 (157-278)||(17180102-17180224)
chr6 (122-264)||(20575416-20575559)
chr6 (117-230)||(16168464-16168577)
chr6 (117-240)||(32417468-32417591)
chr6 (117-240)||(32423309-32423432)
chr6 (123-283)||(24139466-24139626)
chr6 (104-230)||(9902277-9902404)
chr6 (122-229)||(16168644-16168751)
chr6 (126-275)||(10962746-10962896)
chr6 (169-239)||(20575600-20575670)
chr6 (117-230)||(2839624-2839737)
chr6 (122-230)||(2840064-2840172)
chr6 (156-283)||(17179662-17179790)
chr6 (129-283)||(9946672-9946818)
chr6 (117-283)||(28630584-28630742)
chr6 (181-278)||(9901962-9902060)
chr6 (125-230)||(20575660-20575763)
chr6 (157-273)||(11528013-11528130)
chr6 (126-229)||(32417537-32417640)
chr6 (126-229)||(32423378-32423481)
chr6 (186-278)||(10407317-10407410)
chr6 (125-193)||(11528034-11528102)
chr6 (98-193)||(9901939-9902034)
chr6 (186-274)||(10407709-10407799)
chr6 (116-193)||(10407307-10407384)
chr6 (181-252)||(2839628-2839700)
chr6 (181-241)||(2840113-2840173)
chr6 (192-278)||(17132178-17132265)
chr6 (122-193)||(17180128-17180199)
chr6 (181-244)||(20575415-20575478)
chr6 (122-177)||(20575602-20575657)
chr6 (181-225)||(10862665-10862709)
[»] chr1 (34 HSPs)
chr1 (117-275)||(48352708-48352867)
chr1 (126-283)||(27351059-27351217)
chr1 (103-240)||(29419051-29419189)
chr1 (117-275)||(10686680-10686839)
chr1 (160-283)||(8902803-8902927)
chr1 (123-283)||(34254504-34254665)
chr1 (123-244)||(44964072-44964192)
chr1 (117-270)||(1765693-1765846)
chr1 (122-277)||(10685852-10685999)
chr1 (117-223)||(11897841-11897947)
chr1 (99-240)||(17898850-17898992)
chr1 (157-270)||(44963878-44963992)
chr1 (123-230)||(49650578-49650686)
chr1 (126-240)||(1765930-1766044)
chr1 (122-236)||(17898794-17898908)
chr1 (160-230)||(49651013-49651083)
chr1 (156-275)||(4772612-4772723)
chr1 (117-230)||(27351547-27351660)
chr1 (126-238)||(44964018-44964130)
chr1 (126-229)||(1765881-1765984)
chr1 (181-244)||(11897845-11897908)
chr1 (186-273)||(39302339-39302427)
chr1 (193-283)||(48352272-48352366)
chr1 (157-204)||(4030342-4030390)
chr1 (121-193)||(27351114-27351186)
chr1 (181-283)||(8903237-8903340)
chr1 (170-243)||(34254998-34255070)
chr1 (186-269)||(2965499-2965583)
chr1 (117-193)||(8903268-8903344)
chr1 (181-248)||(10685851-10685918)
chr1 (178-230)||(4772171-4772223)
chr1 (121-193)||(8902824-8902896)
chr1 (181-237)||(27351054-27351110)
chr1 (181-237)||(39302753-39302809)
[»] chr7 (80 HSPs)
chr7 (123-283)||(35214811-35214973)
chr7 (105-283)||(1441400-1441571)
chr7 (125-268)||(19925311-19925455)
chr7 (122-278)||(5559111-5559270)
chr7 (125-230)||(31893257-31893362)
chr7 (122-265)||(5805042-5805186)
chr7 (117-244)||(33879514-33879641)
chr7 (123-240)||(21433149-21433266)
chr7 (117-283)||(1286369-1286534)
chr7 (122-268)||(23150643-23150790)
chr7 (122-283)||(27995065-27995227)
chr7 (123-276)||(28256498-28256652)
chr7 (126-283)||(33235042-33235200)
chr7 (122-283)||(39959152-39959314)
chr7 (125-276)||(1349114-1349269)
chr7 (117-230)||(5559630-5559742)
chr7 (117-276)||(20366048-20366206)
chr7 (157-267)||(34951266-34951377)
chr7 (169-278)||(10619851-10619961)
chr7 (123-229)||(22876867-22876972)
chr7 (157-274)||(31175924-31176042)
chr7 (104-241)||(40904677-40904814)
chr7 (123-265)||(1346485-1346624)
chr7 (104-230)||(31893488-31893615)
chr7 (117-278)||(8039662-8039807)
chr7 (117-270)||(21413081-21413234)
chr7 (123-275)||(35215290-35215443)
chr7 (117-241)||(21412865-21412989)
chr7 (169-275)||(23679497-23679603)
chr7 (122-240)||(36566282-36566400)
chr7 (126-270)||(20101831-20101974)
chr7 (117-230)||(28256949-28257062)
chr7 (169-240)||(21433337-21433408)
chr7 (157-275)||(33235518-33235637)
chr7 (117-207)||(39958686-39958776)
chr7 (123-239)||(21412931-21413047)
chr7 (117-229)||(34951475-34951587)
chr7 (157-244)||(5805592-5805679)
chr7 (126-283)||(20183778-20183935)
chr7 (123-229)||(41020137-41020242)
chr7 (157-238)||(4187545-4187626)
chr7 (126-238)||(21433278-21433391)
chr7 (157-275)||(42990539-42990658)
chr7 (122-283)||(8040114-8040266)
chr7 (165-230)||(10620238-10620303)
chr7 (117-242)||(19925104-19925228)
chr7 (122-258)||(20366521-20366658)
chr7 (157-238)||(36566377-36566458)
chr7 (169-268)||(4187663-4187763)
chr7 (168-266)||(6220351-6220449)
chr7 (122-229)||(33879470-33879576)
chr7 (212-278)||(1286768-1286834)
chr7 (123-177)||(1441011-1441065)
chr7 (181-274)||(28104300-28104394)
chr7 (207-283)||(27995538-27995615)
chr7 (186-238)||(1441014-1441066)
chr7 (96-215)||(5075325-5075444)
chr7 (181-244)||(5805041-5805104)
chr7 (128-240)||(29591057-29591171)
chr7 (122-193)||(35214871-35214942)
chr7 (123-193)||(19925327-19925397)
chr7 (123-229)||(34951415-34951521)
chr7 (122-204)||(40904755-40904837)
chr7 (181-241)||(5559110-5559171)
chr7 (100-193)||(28104279-28104372)
chr7 (169-229)||(31893438-31893498)
chr7 (156-224)||(33879349-33879417)
chr7 (122-193)||(5805583-5805654)
chr7 (121-196)||(21433207-21433282)
chr7 (122-193)||(31175946-31176017)
chr7 (181-244)||(31893534-31893597)
chr7 (122-193)||(34951291-34951362)
chr7 (181-244)||(36566281-36566344)
chr7 (187-230)||(36566525-36566568)
chr7 (186-244)||(31893258-31893316)
chr7 (183-244)||(33235039-33235100)
chr7 (125-177)||(4187573-4187625)
chr7 (125-193)||(10619867-10619935)
chr7 (181-229)||(27995064-27995112)
chr7 (181-237)||(34951527-34951583)
[»] chr5 (42 HSPs)
chr5 (126-276)||(36418365-36418516)
chr5 (117-275)||(20728527-20728686)
chr5 (117-271)||(13543083-13543241)
chr5 (123-275)||(30738223-30738377)
chr5 (156-283)||(18248996-18249124)
chr5 (157-283)||(5734502-5734628)
chr5 (104-270)||(6336298-6336458)
chr5 (122-278)||(5734944-5735100)
chr5 (125-238)||(32660266-32660379)
chr5 (157-277)||(30737779-30737900)
chr5 (122-238)||(6336147-6336263)
chr5 (181-275)||(32459430-32459525)
chr5 (103-229)||(35189898-35190024)
chr5 (122-244)||(18951307-18951429)
chr5 (125-230)||(26275511-26275616)
chr5 (157-244)||(32660238-32660325)
chr5 (117-278)||(13538468-13538625)
chr5 (123-230)||(36417891-36417998)
chr5 (117-274)||(13543569-13543727)
chr5 (186-275)||(20729010-20729100)
chr5 (123-204)||(38405573-38405654)
chr5 (190-273)||(18238306-18238390)
chr5 (186-283)||(35891219-35891317)
chr5 (181-230)||(31813954-31814003)
chr5 (122-265)||(1722504-1722648)
chr5 (181-241)||(18951306-18951366)
chr5 (157-228)||(35190426-35190497)
chr5 (117-240)||(14235567-14235688)
chr5 (117-193)||(32459426-32459502)
chr5 (181-244)||(6336146-6336209)
chr5 (122-193)||(36418389-36418460)
chr5 (123-204)||(18951368-18951449)
chr5 (123-275)||(19278710-19278862)
chr5 (186-274)||(32459822-32459911)
chr5 (173-283)||(1722933-1723044)
chr5 (186-241)||(26275512-26275567)
chr5 (186-278)||(26275971-26276055)
chr5 (126-193)||(30737808-30737875)
chr5 (181-244)||(36418458-36418521)
chr5 (186-237)||(38405600-38405651)
chr5 (186-275)||(18237920-18238010)
chr5 (186-240)||(31813894-31813948)
[»] chr3 (20 HSPs)
chr3 (101-283)||(31247602-31247786)
chr3 (157-283)||(4276174-4276301)
chr3 (122-205)||(21377036-21377119)
chr3 (156-278)||(35555565-35555688)
chr3 (103-204)||(50530230-50530332)
chr3 (169-230)||(4276628-4276689)
chr3 (117-277)||(3088066-3088218)
chr3 (117-283)||(21376565-21376732)
chr3 (123-225)||(14964648-14964749)
chr3 (186-273)||(19153885-19153974)
chr3 (186-270)||(54456679-54456764)
chr3 (125-238)||(54456799-54456912)
chr3 (99-193)||(54456651-54456746)
chr3 (186-283)||(31247195-31247292)
chr3 (181-283)||(14629288-14629382)
chr3 (193-274)||(21410273-21410355)
chr3 (186-268)||(24707475-24707558)
chr3 (161-241)||(5505741-5505822)
chr3 (123-229)||(5505692-5505800)
chr3 (157-252)||(54456844-54456940)
[»] scaffold0070 (2 HSPs)
scaffold0070 (122-278)||(28548-28705)
scaffold0070 (181-252)||(28547-28619)
[»] scaffold0019 (4 HSPs)
scaffold0019 (117-248)||(124351-124482)
scaffold0019 (122-210)||(124329-124417)
scaffold0019 (117-238)||(124142-124262)
scaffold0019 (181-243)||(124146-124208)
[»] scaffold0746 (3 HSPs)
scaffold0746 (157-278)||(498-620)
scaffold0746 (122-283)||(25-186)
scaffold0746 (122-193)||(524-595)
[»] scaffold0041 (2 HSPs)
scaffold0041 (104-241)||(45204-45341)
scaffold0041 (122-204)||(45181-45263)
[»] scaffold0027 (2 HSPs)
scaffold0027 (102-278)||(9377-9546)
scaffold0027 (122-224)||(9891-9993)
[»] scaffold0374 (3 HSPs)
scaffold0374 (181-278)||(16176-16274)
scaffold0374 (186-283)||(16565-16663)
scaffold0374 (117-193)||(16172-16248)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 52568436 - 52568151
Alignment:
Q  1 atatatacacggataaagattcaaactcaaactctcatttattcatacataaaaatgtgggttccagtcactagactacttgacgaaattactattatat 100  Q
    ||||||||| || |||||||||||||||| |||||||||||||||||||||||||| |||| || || ||||||||||||||| ||| ||||||||||||    
T  52568436 atatatacatgggtaaagattcaaactcacactctcatttattcatacataaaaatatgggctctagccactagactacttgatgaagttactattatat 52568337  T
Q  101 tttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacaga 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||    
T  52568336 tttaggtcaaaaatcattttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgataga 52568237  T
Q  201 attcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctgatgtccat 286  Q
    |||| |||||||||| ||||||||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  52568236 attctcaagtcagtcctttaagtttcaaaagtttcaaatagatcctttagttgataaactatttcaccgttacccctgatgtccat 52568151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 123 - 267
Target Start/End: Complemental strand, 26330066 - 26329921
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||| ||| || |||||| |||||  |||||||||| |||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||    
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaag 26329967  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 267  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||    
T  26329966 tttcaaaagtttcaaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 31229293 - 31229421
Alignment:
Q  156 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattga 254  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||| ||||||| ||||    
T  31229293 ttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagttga 31229392  T
Q  255 taaactatttcaccgttacccctgatgtc 283  Q
    |||||||||||||||||||| ||| ||||    
T  31229393 taaactatttcaccgttacctctgctgtc 31229421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 52181720 - 52181872
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || || ||| |||||  ||||| ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||    
T  52181720 tccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcctttaag 52181819  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 274  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||||||||||    
T  52181820 tttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 275
Target Start/End: Complemental strand, 8409003 - 8408826
Alignment:
Q  100 ttttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgaca 198  Q
    |||| ||||||| |||| |||| ||| |||||||||||||||| || ||| |||||  |||||||||||||| ||||||| | ||  |||||||||||||    
T  8409003 tttttggtcaaatatcacttttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgaca 8408904  T
Q  199 gaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    |||||  ||||| |||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||| |||||    
T  8408903 gaattttcaagttagtcatttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctaccc 8408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 26330132 - 26330005
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||||||||||||||||||||| || || ||| |||||  ||||||||| ||||||||||||||| || ||||||||| ||||||||||||||| ||||     
T  26330132 ttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcc 26330033  T
Q  217 tttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||||||| ||||||||||||||    
T  26330032 tttaagtttcaaaagtttcaaataggtc 26330005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 123 - 283
Target Start/End: Original strand, 5387131 - 5387292
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||  || | | || |||||  |||||||||  |||||||||||||  |||||||||||||||||||||||||||| || | ||||||    
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||| ||||||||||| || ||||| ||||||||| |||||||||||||||||| ||||    
T  5387231 tttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccctgctgtc 5387292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 43098537 - 43098414
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || | | || |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||     
T  43098537 ttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtcc 43098438  T
Q  217 tttaagtttcaaatgtttcaaata 240  Q
    ||||||||||||| ||||||||||    
T  43098437 tttaagtttcaaaagtttcaaata 43098414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 282
Target Start/End: Complemental strand, 52183544 - 52183392
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||| ||| || || ||| |||||  |||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| |||||    
T  52183544 gtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattcccaagccagtcctttaa 52183445  T
Q  222 gtttcaaatgtttcaaataggtcttttaa-ttgataaactatttcaccgttacccctgatgt 282  Q
    |||||         ||||| || |||||| ||||||||||||||||||||||||||||||||    
T  52183444 gtttc---------aaataagttttttaagttgataaactatttcaccgttacccctgatgt 52183392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 22025426 - 22025301
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||||||| |||||||||||||||| |  ||| |||||  || ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||     
T  22025426 ttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagtcc 22025327  T
Q  217 tttaagtttcaaatgtttcaaataggt 243  Q
    |||||| |||||| |||||||||||||    
T  22025326 tttaag-ttcaaaggtttcaaataggt 22025301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 241
Target Start/End: Original strand, 9320017 - 9320133
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||| ||| | |||||||||| ||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  225 tcaaatgtttcaaatag 241  Q
    ||||| |||||||||||    
T  9320117 tcaaaagtttcaaatag 9320133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 270
Target Start/End: Original strand, 22025095 - 22025206
Alignment:
Q  160 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgataaa 258  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||| || ||| |||||||||||| ||||||| ||||||||    
T  22025095 aagttacgaaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaa 22025194  T
Q  259 ctatttcaccgt 270  Q
    ||||||||||||    
T  22025195 ctatttcaccgt 22025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 41735816 - 41735923
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||| |||||| |||||| |||||  |||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||||| |||||    
T  41735816 gtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtcctttaa 41735915  T
Q  222 gtttcaaa 229  Q
     |||||||    
T  41735916 atttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 43098472 - 43098365
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| |||||||||| || ||||||||||||| ||||||||||||||| |||| |||||    
T  43098472 gtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtcctttaa 43098373  T
Q  222 gtttcaaa 229  Q
    ||||||||    
T  43098372 gtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 278
Target Start/End: Original strand, 19681203 - 19681350
Alignment:
Q  128 ttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttca 227  Q
    ||||||||||  || || ||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||     |||||| | ||    
T  19681203 ttagtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattccgaagtcc----tttaaggtgca 19681298  T
Q  228 aatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    || | |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  19681299 aaggattcaaataggtcattttagttgataaactatttcaccattacccctg 19681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 2789031 - 2788928
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || |  ||| |||||  |||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2789031 ttttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcatttaagttt 2788932  T
Q  226 caaa 229  Q
    ||||    
T  2788931 caaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 2789060 - 2788973
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||||    
T  2789060 tttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtc 2788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 35046437 - 35046545
Alignment:
Q  127 tttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttc 226  Q
    ||||||||||||||| |  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||||||| || | |||| ||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  227 aaatgtttc 235  Q
    ||| |||||    
T  35046537 aaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 283
Target Start/End: Original strand, 52567746 - 52567849
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctga 279  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| ||||| ||||     
T  52567746 ggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttactcctgc 52567845  T
Q  280 tgtc 283  Q
    ||||    
T  52567846 tgtc 52567849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 26329805 - 26329883
Alignment:
Q  160 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 238  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||||||| ||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 267
Target Start/End: Original strand, 43098181 - 43098328
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || | | || |||||  ||||||||| |||||||||||||||||| |||||||||  |||| |||| |||| ||||     
T  43098181 ttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccgaagttagtc- 43098279  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcac 267  Q
       |||||||||| |||||||||| || |||||| |||||||||||||||||    
T  43098280 ---aagtttcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 19631767 - 19631855
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 210  Q
    ||||||||| ||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  19631767 gtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagt 19631855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 35046632 - 35046550
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 239  Q
    |||||||||||||||||| |||| || ||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||    
T  35046632 tttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 2788789 - 2788882
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 210  Q
    ||||| ||||||||||||||   || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2788789 ttttaatccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagt 2788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 8408393 - 8408497
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 267  Q
    ||||||||| ||| || ||||||||||||| ||||| ||||| |||| ||||||||| ||| |||||||||| ||| ||||| ||||||| |||||||||    
T  8408393 aagtttcaaatagatccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcac 8408492  T
Q  268 cgtta 272  Q
    |||||    
T  8408493 cgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 26330007 - 26329936
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||||||| |||||| |||||  |||||||||| |||||||||| |||||||||||||||    
T  26330007 gtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagtt 26329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 244
Target Start/End: Original strand, 41735752 - 41735878
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||| |||  | || ||| |||||  ||| ||||| ||||||||||| | |||| ||||||||| ||| ||||||||||| ||||     
T  41735752 ttttggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaact-ggtccttttagtttaacataattcccaagttagtcc 41735850  T
Q  217 tttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||||||| ||||||||||||||    
T  41735851 tttaagtttcaaaagtttcaaataggtc 41735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 2909182 - 2909286
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||| ||| || || ||| |||||  |||||||||||||||| ||||||||||  ||||||||| ||||||||| ||||| |||| ||||| ||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatt 2909281  T
Q  225 tcaaa 229  Q
    |||||    
T  2909282 tcaaa 2909286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 22025358 - 22025271
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcag 213  Q
    |||||||||||||| || |||||| |||||  |||||||| | || ||||||| ||||| |||||||||||||||||||| ||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaagtt-caaaggtttcaaataggtaattttagtttgacagaattctcaagtcag 22025271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 19632306 - 19632212
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    |||| ||||||||||||||||||| ||| | |||| ||||||||||||| |||| ||||| ||| ||||| ||||||||||| ||||| |||||||    
T  19632306 ggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagttgataaactacttcactgttaccc 19632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 36890450 - 36890533
Alignment:
Q  159 taagtttcgaaagtttcaattaggtca-ttttagtttgacagaattcccaag-tcagtcatttaagtttcaaatgtttcaaata 240  Q
    ||||||| ||||||||||||||| ||| |||| ||||||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  36890450 taagttttgaaagtttcaattagatcatttttggtttgacagaattccgaagtttagtcttttaagtttcaaaagtttcaaata 36890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 42116129 - 42116050
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaac 259  Q
    |||||||||||||||||| ||||   |||| |||| ||||||||||||| |||| ||||||||| |||||||||||||||    
T  42116129 ggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaac 42116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 36890502 - 36890583
Alignment:
Q  149 tttagtattttaagtttcgaaagtttcaattaggtca-ttttagtttgacagaattcccaagtcagtcatttaagtttcaaa 229  Q
    |||||| ||||||||||| |||||||||| || |||| ||||| ||||||| |||| |||||| |||| |||||||||||||    
T  36890502 tttagtcttttaagtttcaaaagtttcaaataagtcatttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 36890703 - 36890618
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 270  Q
    ||||||||||||||||||   |||| | |||||||||||| ||| ||||  |||||||| ||||| ||||||||||||||||||||    
T  36890703 ttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttcaccgt 36890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 52865955 - 52866068
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || || ||| |||||  ||||||||| |||||||| ||||| ||  ||||||||||||| ||| | |||   ||||     
T  52865955 tttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctcaatctagtcc 52866054  T
Q  217 tttaagtttcaaat 230  Q
    ||||||||||||||    
T  52866055 tttaagtttcaaat 52866068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 52866410 - 52866367
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaa 229  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  52866410 ttttagtttgacagaattcccaagttagtcctttaagtttcaaa 52866367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 30543133 - 30543095
Alignment:
Q  245 ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  30543133 ttttaattgataaactatttcaccgttacccctgttgtc 30543095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 2508270 - 2508323
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 239  Q
    |||||||||||||||||| |||||| |||| |||||| |||||| |||||||||    
T  2508270 ttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 5387677 - 5387584
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||| |||||  |||| || | ||||| ||| ||| |||||||||| || |||| | |||||||| |||||||||||||||||||    
T  5387677 ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaatatgtactttcacttgataaattatttcaccgttacccctg 5387584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 52181779 - 52181847
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 190  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||  | |||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaacatgtcatttta 52181847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 266
Target Start/End: Complemental strand, 35024050 - 35023955
Alignment:
Q  172 tttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttca 266  Q
    ||||||||| ||| ||||||||| ||| ||||| ||||| |||| ||||||||| ||| ||||  ||| | || ||||| ||||||||||||||||    
T  35024050 tttcaattatgtctttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 52567747 - 52567818
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||| || ||  || |||||  |||||||||| ||||||| || |||||||||||||||    
T  52567747 gtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 52567818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 8408407 - 8408477
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||| || || ||| | ||| ||||||||||  |||||||||| || ||||||||||||    
T  8408407 tccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagtt 8408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 44915937 - 44915999
Alignment:
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||| |||| ||| ||||| ||||| |||||||| |||||||| ||||||||||    
T  44915937 tttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccctg 44915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 9320077 - 9320142
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 190  Q
    |||||||||||||| || || |||||||||  ||||| |||| |||||||||| ||| ||||||||    
T  9320077 cttttagtttgacagaattctcaatttagtcatttaaatttcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 19631871 - 19631916
Alignment:
Q  231 gtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19631871 gtttcaaataggtcattttagttgataaactattttaccgttaccc 19631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 19632310 - 19632235
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| ||||||||||||||||| || || ||| ||||| ||| ||||||| ||||||| || || ||||||||||||    
T  19632310 ttttggtccttttagtttgacagaattctcaaattagtcttt-aagtttcaaaagttttaaatatgtcattttagtt 19632235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 35023745 - 35023821
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||||||| | || |   || ||||| ||||| ||||  |||||||||||||| |||||||||||    
T  35023745 ttttagtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaattagatcattttagtt 35023821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 35046603 - 35046555
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagttt 174  Q
    |||||||||||||||| |||||| |||||  |||||||||| |||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttt 35046555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 126 - 275
Target Start/End: Complemental strand, 9277109 - 9276960
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || |||||| ||||| |||||||||||||||||||||||||| || ||||||||||| |||||| |||||| |||| |||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagttt 9277010  T
Q  226 caaatgtttcaaataggtcttttaattgataaactatttcaccgttaccc 275  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  9277009 caaaagtttcaaataggtcttttagttgataaactatttcaccgttaccc 9276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 117 - 268
Target Start/End: Complemental strand, 9770920 - 9770768
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  9770920 ttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtcc 9770821  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcacc 268  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  9770820 tttaattttcaaaagtttcaaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 123 - 278
Target Start/End: Complemental strand, 30576788 - 30576632
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || |  ||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  30576788 tccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaag 30576689  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||| |||| ||||| ||| ||||| ||||||||||||||||||||||||||||    
T  30576688 tttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccctg 30576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 270
Target Start/End: Original strand, 36359904 - 36360053
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || | |||| |||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||    
T  36359904 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctttaa 36360003  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 270  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||| |||||    
T  36360004 gttttaaaagtttcaaataggtcattttagttgataaactattttaccgt 36360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 270
Target Start/End: Original strand, 45017745 - 45017899
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||| | || |||||| |||||  |||||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||     
T  45017745 ttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtcc 45017844  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 270  Q
    |||||| ||||||  ||||||||| ||| ||||||||||||||||||||||||||    
T  45017845 tttaagattcaaaaatttcaaataagtcattttaattgataaactatttcaccgt 45017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 123 - 283
Target Start/End: Original strand, 23553359 - 23553520
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || || ||| ||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||  ||| |||||     
T  23553359 tccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaa 23553458  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  23553459 tttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 23553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 274
Target Start/End: Original strand, 9276462 - 9276639
Alignment:
Q  100 ttttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgac 197  Q
    ||||||| |||| |||| |||| ||||||||||||||||| || || |||  ||||  |||||||||| |||||||||||||||||| || |||||||||    
T  9276462 ttttaggccaaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgac 9276561  T
Q  198 agaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 274  Q
    ||||||| ||||| ||||| |||||||| ||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  9276562 agaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacc 9276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 278
Target Start/End: Complemental strand, 39701522 - 39701365
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| |||||  |||||||||| ||||||||||||| ||| ||||||||||| ||||||||||  | ||||||||||    
T  39701522 gtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtcatttaa 39701423  T
Q  222 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||  |||||||||||| |||||| ||||||||||| ||||| ||||||||||    
T  39701422 gtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccctg 39701365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 289
Target Start/End: Complemental strand, 44041422 - 44041249
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |  ||| |||||  ||||||||| |||||||||||||| ||| |||||||||||||||||||| |||| ||||     
T  44041422 tttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtct 44041323  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtccatctc 289  Q
    || ||||||||||  ||||||||| ||| ||||| |||||||||||||||||| |||||| ||||||| |||||    
T  44041322 ttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattacccatgatgtcaatctc 44041249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 39700888 - 39701050
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || ||  || |||||  |||||||||  ||||||||||||| ||| ||||||||||||| |||||| |||| | || |||||    
T  39700888 gtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaa 39700987  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  39700988 gtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccctgctgtc 39701050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 123 - 278
Target Start/End: Complemental strand, 25730252 - 25730095
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa-ttaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||| | || | |||| |||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| |||| |||||    
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
     ||||||| |||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccctg 25730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 16197027 - 16197194
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||| |||||||| || |  ||| |||||   ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||    
T  16197027 ttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaatca 16197126  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||| || |||||||||| |||||| || ||||| ||||||||| |||| |||| ||||    
T  16197127 tttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcaccattacgcctgttgtc 16197194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 270
Target Start/End: Complemental strand, 29794392 - 29794238
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||||||| || |||||| |||||  ||||| ||||||||||||  |||||||| ||||||||||||| |||| |||||| ||||     
T  29794392 ttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttccaagttagtct 29794293  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 270  Q
    ||||||||||||| ||||||||||| | |||||| |||||||| |||||||||||    
T  29794292 tttaagtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgt 29794238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 275
Target Start/End: Original strand, 8713844 - 8714003
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||||||  |  ||||||||||||| ||||| ||||| ||||     
T  8713844 ttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtct 8713943  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    |||||||||||||  |||||||||| || ||||| |||||||| | ||||||||||||||    
T  8713944 tttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttaccc 8714003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 25737107 - 25737269
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||| |||||||||| ||| || |||||||||||| ||||||| |||| |||| |||||    
T  25737107 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcctttaa 25737206  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
     ||||||| |||||| ||| ||| ||||| |||||||||||||||| |||||| |||| ||||    
T  25737207 atttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttacacctgctgtc 25737269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 278
Target Start/End: Complemental strand, 25737736 - 25737581
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa-ttaggtcattttagtttgacagaattcccaagtcagtcatttaagt 223  Q
    |||||||||||| | || | |||| |||||  ||||||||| ||||||||||| ||||||| ||||| ||||||||||||| ||||| |||| ||||| |    
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  224 ttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    |||||| ||||||||||  || ||||| ||||||||||||||||| ||||||||||    
T  25737636 ttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccctg 25737581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 117 - 267
Target Start/End: Original strand, 30576150 - 30576301
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| |||||| |||||| || |||||| |||||  ||||| ||| |||||||||||||| ||| |||||||||| ||||||| |||||| ||||     
T  30576150 ttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtct 30576249  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 267  Q
    ||||||||| ||| ||||||||| |||| ||||| |||||||||||||||||    
T  30576250 tttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcac 30576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 40553368 - 40553260
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || | | || ||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||| | ||||||||    
T  40553368 gtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 40553269  T
Q  222 gtttcaaat 230  Q
    |||||||||    
T  40553268 gtttcaaat 40553260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 11113555 - 11113662
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    ||||||||||||||||||| ||| || |||||  ||||| ||| |||||||||||| ||||| |||||||||||||||||| |||||| |||| ||||||    
T  11113555 tccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcctttaag 11113654  T
Q  223 tttcaaat 230  Q
    ||||||||    
T  11113655 tttcaaat 11113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 244
Target Start/End: Original strand, 43422864 - 43422983
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||| |||| || ||| |||||  ||||||||| |||||||||||||||||| ||||| |||  || ||||||||||| |||| ||||||||    
T  43422864 cttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattcccaagttagtcctttaagtt 43422963  T
Q  225 tcaaatgtttcaaataggtc 244  Q
    ||||| ||||||||||||||    
T  43422964 tcaaaagtttcaaataggtc 43422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 43423226 - 43423100
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||||||||||| ||| || |||||  |||||||||||||||||||||||| ||| ||||||||| | ||||||| ||| | | ||     
T  43423226 ttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtc-ttttagtttcatagaattctcaatttactcc 43423128  T
Q  217 tttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||||||| ||||||||||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtc 43423100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 31169609 - 31169452
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || || ||| |||||  |||||||||  |||||||||| ||| |||||||||||||||  ||||| ||| | |||| |||||||||    
T  31169609 ttttagtttgacaaaattctcaagttagtcctttaagtttt-aaagtttcaaatagatcattttagtttgacgaaattctcaaattagtcctttaagttt 31169511  T
Q  226 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
     ||| |||||||||| ||| ||||| |||||||| |||||||||||||||| |||||||    
T  31169510 taaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacccgtgatgtc 31169452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 36360210 - 36360088
Alignment:
Q  116 attttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtc 215  Q
    ||||| ||| ||||||||||||| || | |||| ||||| |||||||||||||||||||||| || ||| ||||| ||||||| |||| |||||| ||||    
T  36360210 attttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtc 36360111  T
Q  216 atttaagtttcaaatgtttcaaa 238  Q
     ||||||||||||| ||||||||    
T  36360110 ctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 9770565 - 9770672
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    ||||| ||| |||||| || |||||| ||| |  |||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||||||||    
T  9770565 tccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagtcatttaag 9770664  T
Q  223 tttcaaat 230  Q
    ||||||||    
T  9770665 tttcaaat 9770672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 13771937 - 13771843
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 274  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||||| ||| ||||| ||||||||| ||||||| ||||||    
T  13771937 ggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttcactgttacc 13771843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 278
Target Start/End: Complemental strand, 23553994 - 23553840
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || ||  || ||||| |||||||||||||| |||| ||||| ||||||||||||||| ||||||| ||||| |||   | |||||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  225 tcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||||| ||||||||||| || | ||| || ||||| |||||||| ||||||||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgttacccctg 23553840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 274
Target Start/End: Complemental strand, 8714482 - 8714330
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||| | || | |||| |||||  |||||| ||| |||||||||| ||| |  ||||||||||| ||||||| ||||| |||  ||||||    
T  8714482 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 8714383  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 274  Q
    |||| || |||| ||||||||| ||||| ||||||||||||||||| ||||||    
T  8714382 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 8714330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 40553433 - 40553313
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||||||||||| ||| || |||||  ||| |||||  ||||||||||| ||||| ||||||||||||| |||| | |||| ||||     
T  40553433 ttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtct 40553334  T
Q  217 tttaagtttcaaatgtttcaa 237  Q
    ||||||||||||| |||||||    
T  40553333 tttaagtttcaaaagtttcaa 40553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 41190397 - 41190293
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || || ||| |||||  ||||| |||||||| ||||||||||||||||||||||||| ||||||| |||   |||||||||||||    
T  41190397 cttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtt 41190298  T
Q  225 tcaaa 229  Q
    |||||    
T  41190297 tcaaa 41190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 278
Target Start/End: Original strand, 4613778 - 4613900
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgat 255  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||| ||||  | ||| |||| ||||||||||||| |||||||||||  ||||||| || ||    
T  4613778 tttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagtttat 4613877  T
Q  256 aaactatttcaccgttacccctg 278  Q
    |||||||||||||| || |||||    
T  4613878 aaactatttcaccgctaaccctg 4613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 14871482 - 14871368
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttag-tttgacagaattcccaagtcagtc 215  Q
    |||| ||||||| ||||||||| || ||| || ||||| ||||||||||||||||||||||||||||  |||||| ||||||| ||||| ||| | ||||    
T  14871482 ttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtc 14871383  T
Q  216 atttaagtttcaaat 230  Q
     ||||||||||||||    
T  14871382 ctttaagtttcaaat 14871368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 278
Target Start/End: Original strand, 40552800 - 40552922
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgat 255  Q
    ||||| ||| |||||||||||||| |  |||||||||||||| ||||  ||||| || ||||||| |||||||  ||||||||||| ||||| |||||||    
T  40552800 tttaaattttgaaagtttcaattaagatattttagtttgacaaaattttcaagttagccatttaaatttcaaaaatttcaaataggttctttaaattgat 40552899  T
Q  256 aaactatttcaccgttacccctg 278  Q
    ||| |||||||| ||||||||||    
T  40552900 aaaatatttcactgttacccctg 40552922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 13771425 - 13771518
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||| || ||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcaccatttcccctg 13771518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 29792652 - 29792559
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 210  Q
    |||||||||||||||||||||| || |||||| |||||  ||||| ||||||||||||| ||||| || ||||||||||||| ||||| |||||    
T  29792652 ttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataattctcaagt 29792559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 5358650 - 5358754
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtcc 284  Q
    ||||||||||||||||||  ||||| |||| || |||||||||| |||| |||||||| |||||| ||||||||||||||| | |||||||||| ||||     
T  5358650 ttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcgctgttacccctgctgtca 5358749  T
Q  285 atctc 289  Q
    |||||    
T  5358750 atctc 5358754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 6236358 - 6236250
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||| ||| || |||||| ||| |  |||||||||| | ||||||||||||||| ||||| ||||||||| ||||||||| |||  |||||    
T  6236358 gtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtactttaa 6236259  T
Q  222 gtttcaaat 230  Q
    |||||||||    
T  6236258 gtttcaaat 6236250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 39700856 - 39700943
Alignment:
Q  150 ttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||  |||| |||| ||||||||| ||| |||||||    
T  39700856 ttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaa 39700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 43422921 - 43423028
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||| |||  || || |||||| |||||  |||||||||| |||||||||| |||||||||||||||||||| |||| |||||| |||| |||||    
T  43422921 gtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaa 43423020  T
Q  222 gtttcaaa 229  Q
     |||||||    
T  43423021 atttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 238
Target Start/End: Complemental strand, 45018053 - 45017934
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||||||||||||||||||||| ||    ||| |||||  |||||||||||||||||| ||||||||| ||||||||||||  || | |||||| ||||     
T  45018053 ttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgac--aagttccaagttagtcc 45017956  T
Q  217 tttaagtttcaaatgtttcaaa 238  Q
    |||||||||||||  |||||||    
T  45017955 tttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 36314781 - 36314697
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 201  Q
    |||| ||||||||||||||||| || |  ||| ||||| |||||| |||||||||||||||||| ||| ||||||||||||||||    
T  36314781 ttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 35433899 - 35433994
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||| |||| |||||| || ||||| |||||||| |||||||| |||||||    
T  35433899 ggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttaccc 35433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 35434400 - 35434313
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 267  Q
    |||| ||||||||||||| |||||| |||| | || ||||||||||||| |||||||||| ||| ||||| |||||||||||||||||    
T  35434400 ggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 36360205 - 36360138
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 248  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||| || |||||||||| |||||||    
T  36360205 ggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttt 36360138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 9770662 - 9770731
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 238  Q
    ||||||||| |||||| |||||||||||||||||||| |||| |||| |||||||||||||  |||||||    
T  9770662 aagtttcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 266
Target Start/End: Complemental strand, 16208815 - 16208674
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || || ||| |||||  |||||||||   |  |||||| ||| |||||||||||| | ||||||  ||||| |||| ||| |||||    
T  16208815 ttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttcaagttagtcctttgagttt 16208716  T
Q  226 caaatgtttcaaataggt-cttttaattgataaactatttca 266  Q
    |||| |||||||||| || |||||| ||||||||||||||||    
T  16208715 caaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 34686968 - 34686875
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 273  Q
    |||| ||||| ||||||||||||  ||||| |||| ||||| ||| ||| |||| ||||||||| ||||| |||||||||||||||||||||||    
T  34686968 ggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 43423127 - 43423074
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 210  Q
    |||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  43423127 tttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagt 43423074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 6235793 - 6235895
Alignment:
Q  183 tcattttagtttgacagaattcc-caagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcaccgttacccctgat 280  Q
    |||||||||||||||||||||||  |||| | || ||||| ||||||| |||||||||||  | ||||| |||||||||||||||||| ||||| ||| |    
T  6235793 tcattttagtttgacagaattccgaaagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacctctgct 6235892  T
Q  281 gtc 283  Q
    |||    
T  6235893 gtc 6235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 9277112 - 9277058
Alignment:
Q  183 tcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    |||||||||||||||||||||||||||| |||| |||||||||| || |||||||    
T  9277112 tcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaa 9277058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 13771941 - 13771868
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta 190  Q
    |||| ||| |||||||||||||||| |||||| |||||  |||||||||| |||||||||| || |||||||||    
T  13771941 ttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcatttta 13771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 35434404 - 35434328
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| |||||||||||||||||||| ||| || ||| |  |||||||||| |||||||||| || ||||||||||||    
T  35434404 ttttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 35434328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 23179049 - 23179096
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 228  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  23179049 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 23553418 - 23553489
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||| || || ||| || || |||||| |||| |||||||||| |||||||||||||||    
T  23553418 gtccttttagtttgacaaaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagtt 23553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 30576729 - 30576658
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||| || || ||||||||||||    
T  30576729 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagtt 30576658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 36359903 - 36359970
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 248  Q
    |||| |||||||||||||||||| |||||| |||| |||||||||| || ||||||| ||||| ||||    
T  36359903 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttt 36359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 44040860 - 44040922
Alignment:
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||| |||||    
T  44040860 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttatccctg 44040922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 29030252 - 29030175
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagttt 194  Q
    |||| ||| |||||||||||||||| |||  | ||| |  |||||||||||||||||||||||| ||| |||||||||    
T  29030252 ttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 44040808 - 44040896
Alignment:
Q  104 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||| |||||||| ||||||||||||| ||| || |  ||| ||||  ||||||||||| ||||||| || |||||||||||||||    
T  44040808 aggtcaaatatcattttggtccttttagtttaacagaatttacaaattagc-ttttaagtttcaaaagttttaaataggtcattttagtt 44040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 25737106 - 25737166
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
    |||| ||||||||||||| ||||  ||||| |||| ||||||||||||| |||||||||||    
T  25737106 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatag 25737166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 31169614 - 31169555
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
    |||||||||||||||||| ||||| ||||| |||| ||||||||| ||| |||||||||||    
T  31169614 ggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatag 31169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 39701523 - 39701467
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    |||| ||||||||||||||||||| ||||| |||  ||||||||||||| |||||||    
T  39701523 ggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaa 39701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 43423222 - 43423154
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttta 249  Q
    |||| ||||||||||||| |||||| |||| ||| ||||||||||| || ||||||| || ||||||||    
T  43423222 ggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtctttta 43423154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 14871478 - 14871416
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 243  Q
    |||| ||| |||||||||||||||| |||| |||| |||||||||| || ||||||| |||||    
T  14871478 ggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggt 14871416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 9770575 - 9770619
Alignment:
Q  193 ttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    |||||||||||||||||| | ||||||||||||| || |||||||    
T  9770575 ttgacagaattcccaagttaatcatttaagtttcgaaagtttcaa 9770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 39701463 - 39701391
Alignment:
Q  121 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||| | || |||||  |||||  |||||||||| ||| |||||| |||||| ||||||||    
T  39701463 agtccttttagtttgatagaattcccagattagtcatttaagtttcaaaactttcaaataggtccttttagtt 39701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 117 - 283
Target Start/End: Complemental strand, 36196627 - 36196462
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||||||||  | |  ||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  36196627 ttttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtca 36196530  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  36196529 tttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 36196462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 283
Target Start/End: Complemental strand, 27893686 - 27893519
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || || ||| |||||  ||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||     
T  27893686 ttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcc 27893587  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||| ||||||||||| || ||||| |||||||||||||||| ||||| ||||| ||||    
T  27893586 tttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgttaaccctgttgtc 27893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 103 - 275
Target Start/End: Complemental strand, 31264301 - 31264125
Alignment:
Q  103 taggtcaaaaatcattttag-tccttttagtttgacataactcccaattta--gtattttaagtttcgaaagtttcaattaggtcattttagtttgacag 199  Q
    ||||||||| |||| ||| | |||||||||||||||| || | |||| |||  ||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  31264301 taggtcaaatatcacttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacag 31264202  T
Q  200 aattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 275  Q
    |||| |||||| ||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||    
T  31264201 aatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccc 31264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 19080667 - 19080784
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgat 255  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||| |||||| |||||| |||||| |||||    
T  19080667 tttaagttttgaaagtttcaattaggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagttgat 19080766  T
Q  256 aaactatttcaccgttac 273  Q
    ||||||||||||||||||    
T  19080767 aaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 268
Target Start/End: Original strand, 34336039 - 34336185
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||| | || |  ||| |||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  34336039 tccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattcccaagttagtcctttaag 34336138  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 268  Q
    ||||||| |||| ||||||||| ||||| || |||||||||||||||    
T  34336139 tttcaaaagttttaaataggtctttttagttaataaactatttcacc 34336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 30907063 - 30907196
Alignment:
Q  108 caaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccca 207  Q
    |||| |||||||| |  |||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  30907063 caaatatcatttttggtcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctca 30907162  T
Q  208 agtcagtcatttaagtttcaaatgtttcaaatag 241  Q
    ||| |||| ||||||||||||| |||||||||||    
T  30907163 agttagtcctttaagtttcaaaagtttcaaatag 30907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 31263923 - 31264049
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||||||| || | |||| ||| |  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||     
T  31263923 ttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcc 31264022  T
Q  217 tttaagtttcaaatgtttcaaataggt 243  Q
    ||||||||||||| |||||||||||||    
T  31264023 tttaagtttcaaaagtttcaaataggt 31264049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 30907137 - 30907253
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||| ||| || |||||| |||||| ||||||||||| ||||||||||    
T  30907137 gtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcatttaa 30907236  T
Q  222 gtttcaaatgtttcaaa 238  Q
    |||||||| ||||||||    
T  30907237 gtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 270
Target Start/End: Complemental strand, 30907440 - 30907288
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcatttta-gtttgacagaattcccaagtcagtc 215  Q
    ||||| |||||||||||||||| || |   || |||||  |||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||| ||||    
T  30907440 ttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtc 30907341  T
Q  216 atttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgt 270  Q
     ||||||||||||| |||||||||| ||| ||||  ||||||| |||||| ||||    
T  30907340 ctttaagtttcaaaagtttcaaataagtcattta--tgataaattatttcgccgt 30907288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 229
Target Start/End: Original strand, 37542956 - 37543057
Alignment:
Q  127 tttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttc 226  Q
    |||||||||||| |||| | || ||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||| |||| ||||||||||    
T  37542956 tttagtttgacagaacttc-aagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagtttc 37543054  T
Q  227 aaa 229  Q
    |||    
T  37543055 aaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 39376491 - 39376401
Alignment:
Q  158 ttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 248  Q
    |||||||||||||||||  |||||||| |||||  ||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||    
T  39376491 ttaagtttcgaaagttttgattaggtctttttaaattgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttt 39376401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 278
Target Start/End: Complemental strand, 11871835 - 11871714
Alignment:
Q  158 ttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgata 256  Q
    |||||||| |||| ||||||||| ||| | ||||||||||||||||| | ||| |||| ||||||||||||| |||| ||||| ||| ||||| ||||||    
T  11871835 ttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgata 11871736  T
Q  257 aactatttcaccgttacccctg 278  Q
    || ||||| |||||||||||||    
T  11871735 aattatttaaccgttacccctg 11871714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 27893038 - 27893146
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| ||| |  ||||| ||||||||||||||||||  || |||||||||||||| |||||||||| |||| |||||    
T  27893038 gtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattcccaagttagtcctttaa 27893137  T
Q  222 gtttcaaat 230  Q
    |||||||||    
T  27893138 gtttcaaat 27893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 241
Target Start/End: Original strand, 8260392 - 8260507
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||| ||| || || ||| |||||  ||||||||||||||||||||||||| |||||||||||||||||| ||| ||| | | || ||||| |||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaatttt 8260491  T
Q  226 caaatgtttcaaatag 241  Q
    |||| |||||||||||    
T  8260492 caaaagtttcaaatag 8260507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 20535509 - 20535608
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaa-gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||| ||| ||||  ||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  20535509 ttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactatttcaccgttatccctgctgtc 20535608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 98 - 240
Target Start/End: Complemental strand, 34336419 - 34336276
Alignment:
Q  98 tattttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttga 196  Q
    |||||||||||||| |||| |||| ||||||||||||||||| || || ||| |||||  ||||| |||||||||||||| ||| ||| ||||| |||||    
T  34336419 tattttaggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttga 34336320  T
Q  197 cagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 240  Q
    || ||||| ||| | |||  ||||| ||||||| ||||||||||    
T  34336319 caaaattctcaaattagttctttaaatttcaaaagtttcaaata 34336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 16781175 - 16781049
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtc 215  Q
    |||| ||| ||||||||||||| || || ||| |||||  |||||||||| |||||||| ||||||||| ||||||||||||| ||||| ||||| ||||    
T  16781175 ttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtc 16781076  T
Q  216 atttaagtttcaaatgtttcaaatagg 242  Q
     ||||| ||||||| ||||||| ||||    
T  16781075 ctttaaatttcaaaagtttcaattagg 16781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 15506040 - 15506145
Alignment:
Q  173 ttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 271  Q
    |||||||||||| ||||||||||||| ||||| ||| | | || ||||||||| ||| |||| ||| ||||| |||||||||||||||||||||||||||    
T  15506040 ttcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtt 15506139  T
Q  272 acccct 277  Q
    | ||||    
T  15506140 aaccct 15506145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 31263988 - 31264095
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| |||||  |||||||||| |||||||||| |||||  ||||  ||||||||||||||||||| |||  |||||    
T  31263988 gtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtactttaa 31264087  T
Q  222 gtttcaaa 229  Q
    ||||||||    
T  31264088 gtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 34429684 - 34429791
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| |||||  ||||| |||||||| ||||||||||||| ||||| ||||| |||||| |||||| | || |||||    
T  34429684 gtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctttaa 34429783  T
Q  222 gtttcaaa 229  Q
    ||||||||    
T  34429784 gtttcaaa 34429791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 41265364 - 41265257
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||| | || |  ||| |||||  |||||||||||||||||||||||| ||| | ||| ||||||||||||| ||||| |||| ||||||    
T  41265364 tccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcctttaag 41265265  T
Q  223 tttcaaat 230  Q
    ||||||||    
T  41265264 tttcaaat 41265257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 276
Target Start/End: Complemental strand, 42117268 - 42117172
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccc 276  Q
    |||| |||||||||| ||||| | | |||| |||| ||||||||||||| |||| |||||||| |||||| ||||||||| ||||||||||||||||    
T  42117268 ggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 42117172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttg 195  Q
    ||||||||||||| || || ||| ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 20536039 - 20535966
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    |||||||| ||||||||| |||||  |||||||||||||||| ||||| ||||| |||| ||||||||||||||    
T  20536039 tttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaat 20535966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 37543197 - 37543100
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||| || |  ||| ||||| |||||||||| |||||||||||||| ||| ||||||||||||| |||| |||||  |||| ||||||    
T  37543197 cttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 34336335 - 34336227
Alignment:
Q  121 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcattta 220  Q
    |||||||||| ||||||| || || ||| |||||  ||||| |||| |||||||||| || ||| || |||||||||||||||  ||||| | || ||||    
T  34336335 agtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatctttta 34336236  T
Q  221 agtttcaaa 229  Q
    |||||||||    
T  34336235 agtttcaaa 34336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 30907081 - 30907139
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||||||||||||| ||||| |||| |||||||||| || ||||||| ||||||    
T  30907081 ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtc 30907139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 37543048 - 37543089
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagt 210  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  37543048 aagtttcaaacaggtcattttagtttgacagaattcccaagt 37543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 31263927 - 31263990
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| |||||||||||||||||| |||||| | || |||||||||| || ||||||| ||||||    
T  31263927 ggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtc 31263990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 19081124 - 19081062
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 248  Q
    ||||||||||||||||||| ||| | |||| |||||||||| || ||||||| ||||| ||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttt 19081062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 5116895 - 5116956
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    |||||||||||||||| ||||||||||||| ||||   || | |||| ||||||||||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaat 5116956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 27893138 - 27893191
Alignment:
Q  231 gtttcaaataggtcttttaa-ttgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||    
T  27893138 gtttcaaataggtctttttagttgataaactatttcaacgttacctctgctgtc 27893191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 39376172 - 39376284
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||| |||||| || ||| || ||  || |||||| ||||||||||| ||| || ||||||||| || ||||||| |||| ||||     
T  39376172 tttttgtcattttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaattcctaagttagtc- 39376270  T
Q  217 tttaagtttcaaat 230  Q
    ||||| ||||||||    
T  39376271 tttaaatttcaaat 39376284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 5116946 - 5117006
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 229  Q
    ||||||||| || ||||||||||||||||| ||||| ||||| | || ||||| |||||||    
T  5116946 aagtttcaaataagtcattttagtttgacaaaattcacaagttactcctttaactttcaaa 5117006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 34429683 - 34429755
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 252  Q
    |||| ||||||||||||||||||| ||||| |||| ||||| |||| ||  |||||| ||||| |||||||||    
T  34429683 ggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatt 34429755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 10862708 - 10862545
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca-ttta 220  Q
    ||||||||||||||||| || || ||| |||||  ||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||| ||||| ||||    
T  10862708 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcatttta 10862609  T
Q  221 agtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    | ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  10862608 aatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctgctgtc 10862545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 32417829 - 32417684
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||| ||| || |||||| |||||  ||||| |||||||||||||||||||||| ||| ||||||||| |||| | |||| ||||||||||||||    
T  32417829 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32417730  T
Q  226 caaatgtttcaaataggt-cttttaattgataaactatttcaccgt 270  Q
    || | ||||||||||||| |||||| ||||||||||||||||||||    
T  32417729 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32417684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 32423670 - 32423525
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||| ||| || |||||| |||||  ||||| |||||||||||||||||||||| ||| ||||||||| |||| | |||| ||||||||||||||    
T  32423670 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32423571  T
Q  226 caaatgtttcaaataggt-cttttaattgataaactatttcaccgt 270  Q
    || | ||||||||||||| |||||| ||||||||||||||||||||    
T  32423570 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 11527535 - 11527693
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||| |||||||||| ||| || |||||  |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||     
T  11527535 ttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtcc 11527634  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||         |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  11527635 tttaa---------gtttcaaataggtcattttagttgataaactatttcaccgttacccctgctgtc 11527693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 248
Target Start/End: Complemental strand, 16168807 - 16168685
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || | |||| |||||  ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||  ||| ||||    
T  16168807 ttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtctattacgttt 16168708  T
Q  226 caaatgtttcaaataggtctttt 248  Q
    |||| ||||||||||||||||||    
T  16168707 caaaagtttcaaataggtctttt 16168685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 17180224 - 17180102
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    |||||||||||||||||| ||||| ||| ||||||||||||| ||||  ||||| |||| ||||||||| ||| ||||||||||| || ||||| |||||    
T  17180224 tttaagtttcgaaagttttaattatgtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgat 17180125  T
Q  256 aaactatttcaccgttacccctg 278  Q
    |||||||||||||||||||||||    
T  17180124 aaactatttcaccgttacccctg 17180102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 20575416 - 20575559
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||| | || | |||| |||||  |||||||||||||||||| || |||||| ||||||||||| |||||| |||||| |||| |||||    
T  20575416 gtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatttccaagttagtcctttaa 20575515  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactattt 264  Q
    |||| ||| |||||||||||||| ||| | ||||||||||||||    
T  20575516 gttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 16168464 - 16168577
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||| | || || ||  |||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||     
T  16168464 ttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatttccaagttagtcc 16168563  T
Q  217 tttaagtttcaaat 230  Q
    ||||||||||||||    
T  16168564 tttaagtttcaaat 16168577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 32417468 - 32417591
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||    
T  32417468 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32417567  T
Q  217 tttaagtttcaaatgtttcaaata 240  Q
    ||||||||||||| |||| |||||    
T  32417568 tttaagtttcaaaagttttaaata 32417591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 32423309 - 32423432
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||  ||||| |||||    
T  32423309 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32423408  T
Q  217 tttaagtttcaaatgtttcaaata 240  Q
    ||||||||||||| |||| |||||    
T  32423409 tttaagtttcaaaagttttaaata 32423432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 283
Target Start/End: Complemental strand, 24139626 - 24139466
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    ||||||||||| ||||||| || ||| |||||  |||||||||||||||||| ||||| ||| ||||||||||| ||||||  || || |||| ||||||    
T  24139626 tccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcctttaag 24139528  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||  ||||||||| ||| ||||| |||||||| |||||||| || ||||||| ||||    
T  24139527 tttcaaaaatttcaaataagtctttttagttgataaattatttcactgtaacccctgttgtc 24139466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 9902404 - 9902277
Alignment:
Q  104 aggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 202  Q
    |||||||| |||||||| | | |||||||||||||| || |  ||| ||||| ||||||||||||||||||| ||||| ||| ||||||||||||| |||    
T  9902404 aggtcaaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataat 9902305  T
Q  203 tcccaagtcagtcatttaagtttcaaat 230  Q
    |||| ||| |||  ||||||||||||||    
T  9902304 tcccgagttagttctttaagtttcaaat 9902277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 16168751 - 16168644
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| ||||| | ||| ||||| |||||||||| |||||| |||||||||||| ||| |||||||| |||| |||||    
T  16168751 gtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtcttttaa 16168652  T
Q  222 gtttcaaa 229  Q
    ||||||||    
T  16168651 gtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 10962746 - 10962896
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || ||| || ||| | | | |||||||||||||||||||||| || ||||| ||| | |||||| | || | |||| |||||||||    
T  10962746 ttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtcctttaagttt 10962845  T
Q  226 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
     ||| |||||||||| ||| ||||| |||||||||||||| ||||||||||    
T  10962846 taaaagtttcaaatatgtcattttagttgataaactattttaccgttaccc 10962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat 239  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 2839624 - 2839737
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||| ||||| | || || ||| |||||  |||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||     
T  2839624 ttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcc 2839723  T
Q  217 tttaagtttcaaat 230  Q
    ||||| ||||||||    
T  2839724 tttaaatttcaaat 2839737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 2840172 - 2840064
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||| |||||| || ||| |||||  |||||||||| |||||||| | ||| || ||||||||| ||||||||| ||||| | ||||||||    
T  2840172 gtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctcaagttaatcatttaa 2840073  T
Q  222 gtttcaaat 230  Q
    |||||||||    
T  2840072 gtttcaaat 2840064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 17179662 - 17179790
Alignment:
Q  156 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattga 254  Q
    ||||||||||||||| ||| |||||||||  |||||||||| ||||||  ||||| |||| ||||| |||||||  |||||||||||| |||||| ||||    
T  17179662 ttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagttga 17179761  T
Q  255 taaactatttcaccgttacccctgatgtc 283  Q
    |||   ||||||||||||| |||| ||||    
T  17179762 taagtcatttcaccgttactcctgctgtc 17179790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 9946818 - 9946672
Alignment:
Q  129 tagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 228  Q
    ||||||||||||| | | || |||||  ||||| | |||||||||||||||||||||||||||||||||| |||| |||| | |||| |||||           
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaa------- 9946726  T
Q  229 atgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
       ||||||| |||| |||||| |||||||||||||||||||||||||||| ||||    
T  9946725 --atttcaaagaggtccttttagttgataaactatttcaccgttacccctgctgtc 9946672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 283
Target Start/End: Complemental strand, 28630742 - 28630584
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||||||||||| ||| || ||||| |||||||||| |||||||||||||||  |  |||||||||  |||||||| |||| |||      
T  28630742 ttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattcctaagttagtac 28630643  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||         | ||||||||||| |||||| |||||||||||||||||| ||||||||| ||||    
T  28630642 tttaa---------gcttcaaataggtccttttagttgataaactatttcacctttacccctgttgtc 28630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 9901962 - 9902060
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    |||| |||||||||| ||||||| |||||| |||  ||| ||||||||| |||| ||||||||| ||||| |||||||||||||||| |||||||||||    
T  9901962 ggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttcatcgttacccctg 9902060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 20575763 - 20575660
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||||||| || || ||| ||||||||||||| ||||||||||| |||| || |||||    
T  20575763 cttttagtttgacagaattctcaagttagt-ttttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagtc-ttcaagtt 20575666  T
Q  225 tcaaat 230  Q
    ||||||    
T  20575665 tcaaat 20575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 11528130 - 11528013
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    |||||||||  |||||||||| ||  |  ||||||||||||| || |||||| | | || ||||||||||||| |||||||||| ||| ||||| |||||    
T  11528130 tttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgat 11528031  T
Q  256 aaactatttcaccgttac 273  Q
    |||||||||||| |||||    
T  11528030 aaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 32417537 - 32417640
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || |  ||| |||||  |||||||||| ||||||| || || ||| |||||||||||||||||| |||| | |||| |||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  226 caaa 229  Q
    ||||    
T  32417637 caaa 32417640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 32423378 - 32423481
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || |  ||| |||||  |||||||||| ||||||| || || ||| |||||||||||||||||| |||| | |||| |||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  226 caaa 229  Q
    ||||    
T  32423478 caaa 32423481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 10407317 - 10407410
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||| |||||| | || | |  ||||||||||||| |||||||||| ||| ||||| |||||||| |||||||| ||||||||||    
T  10407317 ttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacccctg 10407410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 11528102 - 11528034
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||| |||||| ||| |  |||||||||| |||||||||| || ||||||||||||    
T  11528102 cttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagtt 11528034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 9901939 - 9902034
Alignment:
Q  98 tattttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||| |||| || ||||| |||||||||||||| || || | |||| |||||  ||| |||||| ||||||| || |||||||||||||||    
T  9901939 tattttaggccaaatataattttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagtt 9902034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 10407799 - 10407709
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttc-aaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 274  Q
    ||||||||| || |||||| ||||| ||||||| ||||||  ||| |||||||||| ||| ||||| ||||||||||||||||| ||||||    
T  10407799 ttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttcactgttacc 10407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 10407307 - 10407384
Alignment:
Q  116 attttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||||||||| || ||| |  ||| |  |||||||||| |||||||||| || ||||||||||||    
T  10407307 attttagtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagtt 10407384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 2839628 - 2839700
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 252  Q
    |||| ||||| ||||| ||||||| ||||| |||| ||||||||||||| ||||||| ||||| |||||||||    
T  2839628 ggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatt 2839700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 2840173 - 2840113
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
    |||| ||||||||| ||| ||||| ||||| |||||||||||||||||| ||||| |||||    
T  2840173 ggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatag 2840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 17132265 - 17132178
Alignment:
Q  192 tttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||| ||||| | || ||||||||||||| | |||||||| ||| | ||| || ||||||||||| |||||||| ||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttactcctg 17132178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 17180199 - 17180128
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| |||||||||||    
T  17180199 gtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagtt 17180128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 20575415 - 20575478
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| ||||||||||| |||||| |||||| |||| |||||||||| || |||| |||||||||    
T  20575415 ggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtc 20575478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 20575657 - 20575602
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 177  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||    
T  20575657 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 20575602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 10862709 - 10862665
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||    
T  10862709 ggtccttttagtttgacagaattctcaagttagtcctttaagttt 10862665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 48352867 - 48352708
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |||| | ||||| |||||||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||||     
T  48352867 ttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtcc 48352768  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    ||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  48352767 tttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 48352708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 27351059 - 27351217
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||| ||||||| || || ||| |||||  |||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| |||| |||||||||    
T  27351059 ttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtcctttaagttt 27351158  T
Q  226 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||| || ||||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  27351159 caaaagtatcaaataagtcattttagttgataaactatttcaccgttacccctgctgtc 27351217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 29419189 - 29419051
Alignment:
Q  103 taggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 201  Q
    ||||||||| |||| |||| |||||||||||||||||||| | |||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  29419189 taggtcaaatatcacttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaa 29419090  T
Q  202 ttcccaagtcagtcatttaagtttcaaatgtttcaaata 240  Q
    |||| || | |||| ||||||||||||| ||||||||||    
T  29419089 ttccaaaattagtcttttaagtttcaaaagtttcaaata 29419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 10686839 - 10686680
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |  ||| |||||  |||||||||||||||||| | ||||||| ||||| ||  ||||||||| ||||| |||||    
T  10686839 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtca 10686740  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    ||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  10686739 tttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 10686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 8902803 - 8902927
Alignment:
Q  160 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaa 258  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||| || |||||| ||||||||    
T  8902803 aagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaa 8902902  T
Q  259 ctatttcaccgttacccctgatgtc 283  Q
     |||||||| |||||||||| ||||    
T  8902903 ttatttcactgttacccctgttgtc 8902927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 283
Target Start/End: Original strand, 34254504 - 34254665
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || || ||| || ||  |||||| ||| ||||||| || ||| || |||||||||||||||||||| ||||||||| ||||||    
T  34254504 tccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcagtcctttaag 34254603  T
Q  223 tttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||| ||||||||||  | |||||| | ||||||||||||||| |||||||||| ||||    
T  34254604 tttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacccctgttgtc 34254665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 244
Target Start/End: Complemental strand, 44964192 - 44964072
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    ||||||||||| |||| || || ||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| | || ||||||    
T  44964192 tccttttagttagacaaaattctcaagttagtcttt-aagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcctttaag 44964094  T
Q  223 tttcaaatgtttcaaataggtc 244  Q
    ||| ||| ||||||||||||||    
T  44964093 ttttaaaagtttcaaataggtc 44964072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 270
Target Start/End: Original strand, 1765693 - 1765846
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    ||||||||||||||||||||   || ||| || ||||| ||||||||||||||| ||| ||| ||||||| ||||||||||| |||| | || | ||||     
T  1765693 ttttagtccttttagtttgaacgaattcctaagttagt-ttttaagtttcgaaaattttaatcaggtcatgttagtttgacataatttctaaattagtcc 1765791  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 270  Q
    ||||||||||||| |||| |||||| | |||||| ||||||||||||||||||||    
T  1765792 tttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgt 1765846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 277
Target Start/End: Original strand, 10685852 - 10685999
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || |  ||| |||||  ||||||||||||| |||||||||| ||| |||||||||||||||||| |||||| |||| |||||    
T  10685852 gtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcctttaa 10685951  T
Q  222 gtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccct 277  Q
    ||||||||| | |||        ||||| |||||||||||||| ||||||||||||    
T  10685952 gtttcaaatatgtca--------ttttagttgataaactattttaccgttacccct 10685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 11897841 - 11897947
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||     
T  11897841 ttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagttaatcc 11897940  T
Q  217 tttaagt 223  Q
    |||||||    
T  11897941 tttaagt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 17898992 - 17898850
Alignment:
Q  99 attttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgac 197  Q
    ||||||||||||| | || |||| |||||||||||||||||| | || ||| |||||  |||||||||  ||| ||||||||||||| |||||||||||     
T  17898992 attttaggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgat 17898893  T
Q  198 agaattcccaagtcagtcatttaagtttcaaatgtttcaaata 240  Q
    ||||||| ||| | |||| ||||||||||||| ||||||||||    
T  17898892 agaattcacaaattagtcctttaagtttcaaaagtttcaaata 17898850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 44963878 - 44963992
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt-aattgat 255  Q
    |||||||||||||||||||||| | ||| ||||||||||| || |||||||| | |||| ||||||||||||| |||| |||||  |||||| | |||||    
T  44963878 tttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgat 44963977  T
Q  256 aaactatttcaccgt 270  Q
    |||||||||||||||    
T  44963978 aaactatttcaccgt 44963992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 49650578 - 49650686
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaa 221  Q
    ||||||||||||||||||| || ||| |||||  ||||| ||| |||| ||||||||||||| ||||||||||||||||||| ||||| ||| | |||||    
T  49650578 tccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttttaa 49650677  T
Q  222 gtttcaaat 230  Q
    |||||||||    
T  49650678 gtttcaaat 49650686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 1766044 - 1765930
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||| ||||||| || || ||| ||||| |||||| |||| ||||||| ||||| |||||||||||||||||||| || || || |||| |||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  226 caaatgtttcaaata 240  Q
    |||| ||||||||||    
T  1765944 caaaagtttcaaata 1765930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 17898908 - 17898794
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||| | || || ||| |||||  |||||||||| |||||||||| || ||||||||||||||||||||||  ||| | |||| |||||    
T  17898908 gtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaa 17898809  T
Q  222 gtttcaaatgtttca 236  Q
     ||||||| ||||||    
T  17898808 atttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 49651083 - 49651013
Alignment:
Q  160 aagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  49651083 aagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttcaaat 49651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 275
Target Start/End: Complemental strand, 4772723 - 4772612
Alignment:
Q  156 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgat 255  Q
    |||||||||| |||| ||| |||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||     ||||   ||||||| |||||    
T  4772723 ttttaagttttgaaatttttaattgggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaat-----aaat---tcttttagttgat 4772632  T
Q  256 aaactatttcaccgttaccc 275  Q
    ||||||||||| ||||||||    
T  4772631 aaactatttcatcgttaccc 4772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 27351660 - 27351547
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||| |||||||||| || ||| ||  || |||||||||||||||||| ||||| ||| ||||| ||||| ||||||| ||| | ||||     
T  27351660 ttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtcc 27351561  T
Q  217 tttaagtttcaaat 230  Q
    ||||||||||||||    
T  27351560 tttaagtttcaaat 27351547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 44964130 - 44964018
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || || ||| ||| |  |||||||||  |||||||||| |||||| ||||||||||||||||||| ||||| |||| ||||| |||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattt 44964031  T
Q  226 caaatgtttcaaa 238  Q
     ||| ||||||||    
T  44964030 taaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 1765984 - 1765881
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || || ||  |||||  |||||| ||| |||||||||| || |||||||||||||||||||||| |||||| | || |||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T
Q  226 caaa 229  Q
    ||||    
T  1765884 caaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 11897845 - 11897908
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| ||||||    
T  11897845 ggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtc 11897908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 39302339 - 39302427
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttac 273  Q
    ||||||||||||||||||| ||| | | |  ||||||||||||| ||||| | ||||| |||||| |||||||||||||||||||||||    
T  39302339 ttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 283
Target Start/End: Original strand, 48352272 - 48352366
Alignment:
Q  193 ttgacagaattcccaagtcagtc----atttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||||||||||||| ||||    ||||| |||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||| ||||    
T  48352272 ttgacagaattcccaagttagtccgtcatttaggtttaaaa-gtttcaaataggttcttttagttgataaactatttcaccgctacccctgctgtc 48352366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 4030342 - 4030390
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggt-cattttagtttgacagaattc 204  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  4030342 tttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 27351114 - 27351186
Alignment:
Q  121 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||||||| || ||| |||||  |||||||||| ||||| |||| || ||||||||||||    
T  27351114 agtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtatcaaataagtcattttagtt 27351186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 8903340 - 8903237
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctga 279  Q
    |||| ||||||||||||| ||||| ||||| | || |||||||||| || ||||||||||  || ||||| ||| |||| |||||||| ||||||||||     
T  8903340 ggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgttacccctgt 8903241  T
Q  280 tgtc 283  Q
    ||||    
T  8903240 tgtc 8903237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 34255070 - 34254998
Alignment:
Q  170 agtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 243  Q
    ||||||||||||||   ||||||||||||||||| |||||| ||   ||||||||||||| |||||||||||||    
T  34255070 agtttcaattaggtatatttagtttgacagaatttccaagttag-attttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 2965499 - 2965583
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccg 269  Q
    |||||||||||| |||||  ||||| |  | ||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 8903344 - 8903268
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| ||| |||||||||||||||| || ||| ||| |  ||||||||||||||||||||| ||  |||||||||||    
T  8903344 ttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagtt 8903268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 10685851 - 10685918
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtctttt 248  Q
    |||| ||||||||||||||||||  ||||| |||| |||||||||| || ||||||| || |||||||    
T  10685851 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttt 10685918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 4772171 - 4772223
Alignment:
Q  178 ttaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    ||||||| ||||||||||||| ||||| ||||  |||| ||||||||||||||    
T  4772171 ttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaat 4772223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 8902824 - 8902896
Alignment:
Q  121 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| ||||||||||||| || |||||| |||||  |||||||||| ||||||| || || ||| ||||||||    
T  8902824 agtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 27351054 - 27351110
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    |||| ||||| ||||||||||||| ||||| |||| |||||||||| || |||||||    
T  27351054 ggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaa 27351110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 39302809 - 39302753
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    |||| ||||||||||||||||||| ||||| |||| ||||| ||| ||| |||||||    
T  39302809 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaa 39302753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 283
Target Start/End: Original strand, 35214811 - 35214973
Alignment:
Q  123 tccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||||| || | | || |||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||    
T  35214811 tccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaa 35214910  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  35214911 gtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccctgttgtc 35214973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 105 - 283
Target Start/End: Complemental strand, 1441571 - 1441400
Alignment:
Q  105 ggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 203  Q
    ||||||| |||| |||| |||||||||||||||||||| |||||| |||||  |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  1441571 ggtcaaatatcacttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaatt 1441472  T
Q  204 cccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||| |||| ||||||||||         |||||||| |||||| ||||||||||||||||| |||||||||| ||||    
T  1441471 cccaagttagtcttttaagtttc---------aaataggtccttttagttgataaactatttcactgttacccctgctgtc 1441400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 19925455 - 19925311
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || |||||| |||||  |||||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||| ||||||||    
T  19925455 cttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtt 19925356  T
Q  225 tcaaatgtttcaaataggt-cttttaattgataaactatttcacc 268  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||||    
T  19925355 tcaaaagtttcaaataggtcctttcagttgataaactatttcacc 19925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 5559111 - 5559270
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-cattt 219  Q
    ||||||||| ||||||| || |||||| |||||  ||||||||||| |||||||||| ||| || ||||||||||| | ||||||||||| ||| | |||    
T  5559111 gtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtcctttt 5559210  T
Q  220 aagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 278  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  5559211 aagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctg 5559270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 31893257 - 31893362
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || || ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  31893257 cttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagtcttttaagtt 31893356  T
Q  225 tcaaat 230  Q
    ||||||    
T  31893357 tcaaat 31893362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 5805042 - 5805186
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  | || |||||    
T  5805042 gtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattcctttaa 5805141  T
Q  222 gtttcaaatgtttcaaataggt-cttttaattgataaactatttc 265  Q
    |||||||| |||| || ||||| |||||| |||||||||||||||    
T  5805142 gtttcaaaagttttaactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 33879641 - 33879514
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||||||||||||||||||||| ||||| |||||||||||| |||||| | ||     
T  33879641 ttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatcc 33879542  T
Q  217 tttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||||||| ||||||||||||||    
T  33879541 tttaagtttcaaaagtttcaaataggtc 33879514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 21433149 - 21433266
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || || ||| |||||  ||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  21433149 tccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcatttaag 21433248  T
Q  223 tttcaaatgtttcaaata 240  Q
    ||||||| ||||||||||    
T  21433249 tttcaaaagtttcaaata 21433266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 1286369 - 1286534
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||| | || |  ||| ||||| |||||| |||| ||||||||||||||||| ||||||||||| |||||||  |||| ||||     
T  1286369 ttttcgtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtct 1286468  T
Q  217 tttaagtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||| |||||||||||| ||||||| |||||||| ||  ||||||||||||||| ||||    
T  1286469 tttaagtttcaaaagtttcaaataggttcttttagttgataaatta--tcaccgttacccctgctgtc 1286534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 268
Target Start/End: Original strand, 23150643 - 23150790
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||||||||| || ||| |||||  ||||| ||| |||||||||||||| ||||||||| ||||||||||||| ||  | |||| |||||    
T  23150643 gtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagtcttttaa 23150742  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 268  Q
    |||||||| ||||||||||  || ||||| ||||||||||||||||||    
T  23150743 gtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 27995065 - 27995227
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||| ||| ||| || ||| |||||||| ||||||||||||| ||||| | || |||||    
T  27995065 gtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctcaagttaatcctttaa 27995164  T
Q  222 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||| || ||||||| ||  ||||| ||||||||||||||||| |||||||||| ||||    
T  27995165 gtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccctgctgtc 27995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 123 - 276
Target Start/End: Original strand, 28256498 - 28256652
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || |||||| ||| |  ||||| |||| ||||||| ||  || || ||||||||||||||||||| ||||| |||| |||||     
T  28256498 tccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcctttaaa 28256597  T
Q  223 tttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccc 276  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  28256598 tttcaaaagtttcaaataggttcttttagttgataaactatttcactgttacccc 28256652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 33235042 - 33235200
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || || ||| ||| |  ||||| |||  ||||||||||||||||| |||| |||||||||||||||||||| || | ||||| |||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  226 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||| |||||||| ||||| ||||| |||||||||||||||| ||||||||||| ||||    
T  33235142 caaaagtttcaaagaggtcattttagttgataaactatttcatcgttacccctgttgtc 33235200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 39959314 - 39959152
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || |   || |||||  ||||| |||  |||||||||| ||| |  |||||||||||||||||| |||||| | ||||||||    
T  39959314 gtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatcatttaa 39959215  T
Q  222 gtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||||||||| | ||||||||    
T  39959214 gtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgttaacgctgatgtc 39959152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 276
Target Start/End: Complemental strand, 1349269 - 1349114
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaa---gtcagtcatttaa 221  Q
    ||||||||||||||||| | | || ||||| ||||||||||| ||||||| || ||  ||||||||||||||||||||| ||||    | |||| |||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccc 276  Q
    |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttacccc 1349114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 5559742 - 5559630
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |||||| |||||  |||||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  5559742 ttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttt-aaagtttcaattaggtccttttagtttgacagaattcccaagttagtcc 5559644  T
Q  217 tttaagtttcaaat 230  Q
    ||||||||||||||    
T  5559643 tttaagtttcaaat 5559630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 276
Target Start/End: Original strand, 20366048 - 20366206
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||| ||| || || ||| |||||  |||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||| ||     
T  20366048 ttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattctc-agtcaatcc 20366145  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccc 276  Q
     |||  ||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20366146 cttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttacccc 20366206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 34951266 - 34951377
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||  |||| |||| ||||||||||||| |||||||||| ||| ||||| |||||    
T  34951266 tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgat 34951365  T
Q  256 aaactatttcac 267  Q
    ||||||||||||    
T  34951366 aaactatttcac 34951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 10619851 - 10619961
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcac 267  Q
    |||||||||||||||  ||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  268 cgttacccctg 278  Q
    ||||| |||||    
T  10619951 cgttatccctg 10619961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 22876972 - 22876867
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    ||||||||||||||||||| | |||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | || ||||||    
T  22876972 tccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctcaagttaatcctttaag 22876874  T
Q  223 tttcaaa 229  Q
    |||||||    
T  22876873 tttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 31176042 - 31175924
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgat 255  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||| |||||||| |||| |||||| |||||    
T  31176042 tttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagttgat 31175943  T
Q  256 aaactatttcaccgttacc 274  Q
    || ||||| || |||||||    
T  31175942 aatctattccaacgttacc 31175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 40904677 - 40904814
Alignment:
Q  104 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 203  Q
    |||||||| | || ||| |||||||| ||||||||||| || ||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  40904677 aggtcaaataccactttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataatt 40904776  T
Q  204 cccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
      ||| | |||||||||||||| ||| |||||||||||    
T  40904777 ttcaaattagtcatttaagttttaaaagtttcaaatag 40904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 1346485 - 1346624
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || ||  || |||||  ||||||||||||||||||||||||  || ||||||||||||| |||| |||||| |||| ||||||    
T  1346485 tccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcctttaag 1346584  T
Q  223 tttcaaatgtttcaaataggtcttttaattgataaactatttc 265  Q
    ||||||| ||||||   || ||||||| |||||||||||||||    
T  1346585 tttcaaaagtttca---agttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 31893615 - 31893488
Alignment:
Q  104 aggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 202  Q
    |||||||| |||||||| | |||||||||||||||| || | | || |||||  |||||||||  ||||||||||||||||| |||||||||||||||||    
T  31893615 aggtcaaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaat 31893516  T
Q  203 tcccaagtcagtcatttaagtttcaaat 230  Q
    || ||||| |||| ||||||||||||||    
T  31893515 tctcaagttagtcctttaagtttcaaat 31893488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 8039662 - 8039807
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||||||||||| || ||| |||||  |||||||||||||||||||||||||||| ||||||||||| ||||                   
T  8039662 tttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaagaa--------------- 8039746  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 278  Q
      ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8039747 --taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccctg 8039807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 117 - 270
Target Start/End: Complemental strand, 21413234 - 21413081
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||||||| |||| || |||||| |||||  ||| |||||||||| ||||||||||| | ||||| |||||||||||| | |||| |||      
T  21413234 ttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttctaagttagt-t 21413136  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 270  Q
    ||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||    
T  21413135 tttaagtttcaaaagtttcaaataggtccttttagttcataaactacttcaccgt 21413081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 275
Target Start/End: Complemental strand, 35215443 - 35215290
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || |  ||| |||||  ||||| |||||||| ||||||||| ||||||||| |||||||||||| |||| | |||| ||||||    
T  35215443 tccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttccaaattagtcttttaag 35215344  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    ||| ||| ||||||||||  || ||||| ||||||||||||||||  |||||||    
T  35215343 ttttaaaagtttcaaataactcattttagttgataaactatttcattgttaccc 35215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 21412865 - 21412989
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||||||||||||||||||||| || ||  || ||| |  ||||||||| ||||||||||||||| || ||||||||||||||||||  ||||| ||||     
T  21412865 ttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcc 21412964  T
Q  217 tttaagtttcaaatgtttcaaatag 241  Q
    ||||||||||||| |||| ||||||    
T  21412965 tttaagtttcaaaagttttaaatag 21412989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 23679603 - 23679497
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag-gtcttttaattgataaactatttcac 267  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||| ||||||||||||| |||| ||||||  | ||||| |||||||||||||||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  268 cgttaccc 275  Q
    ||||||||    
T  23679504 cgttaccc 23679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 36566282 - 36566400
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc-ccaagtcagtcattta 220  Q
    ||||||||||||||||| || ||  || |||||  ||||||||| |||||||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  36566282 gtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttagtc-ttta 36566380  T
Q  221 agtttcaaatgtttcaaata 240  Q
    |||||||||  |||||||||    
T  36566381 agtttcaaaattttcaaata 36566400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 126 - 270
Target Start/End: Original strand, 20101831 - 20101974
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||  || |||||| ||||| |||||||||||||||||||||||||| || |||||||| ||||| |||  ||||| |||| |||||||||    
T  20101831 ttttagtttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgacag-attttcaagttagtcctttaagttt 20101928  T
Q  226 caaatgtttcaaatag-gtcttttaattgataaactatttcaccgt 270  Q
     ||| |||| ||||||  ||| ||| ||||||||||||||||||||    
T  20101929 taaaagttttaaatagattctcttagttgataaactatttcaccgt 20101974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 28257062 - 28256949
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||| |||| ||  || ||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||  ||||| ||||     
T  28257062 tttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttcaagttagtcc 28256963  T
Q  217 tttaagtttcaaat 230  Q
    ||||||||| ||||    
T  28256962 tttaagttttaaat 28256949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 21433408 - 21433337
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 240  Q
    |||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||| ||||||||||    
T  21433408 aagtttcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaata 21433337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 33235637 - 33235518
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    |||| |||| |||||||| |||| |||| ||||||||||||| ||||  ||||| |||| |||||||||||||   |||||||||||| ||||| |||||    
T  33235637 tttacgttttgaaagttttaatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgat 33235538  T
Q  256 aaactatttcaccgttaccc 275  Q
    |||||||||||| |||||||    
T  33235537 aaactatttcactgttaccc 33235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 39958686 - 39958776
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattccca 207  Q
    |||| |||||||||||||||||||| |   || |||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  39958686 ttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattccca 39958776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 239
Target Start/End: Original strand, 21412931 - 21413047
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || |  ||| |||||  |||||||||| ||||||| || ||| |||||||||||| ||||||||| ||||| |||| ||||||    
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaag 21413030  T
Q  223 tttcaaatgtttcaaat 239  Q
    ||||||| |||| ||||    
T  21413031 tttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 34951587 - 34951475
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||||||| || |  ||| |||||  ||||||||||||||||||||||||| || ||||||||||||| |||| | || ||||||     
T  34951587 ttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttctaaatcagtcc 34951488  T
Q  217 tttaagtttcaaa 229  Q
    |||||||||||||    
T  34951487 tttaagtttcaaa 34951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 5805679 - 5805592
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||| |||||||||||||| ||| |||||||||||| |||||  ||||| | || ||||||||||||| ||||||||||||||    
T  5805679 tttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtc 5805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 20183778 - 20183935
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    ||||||||||||| || |  ||||| |||  ||||| ||| ||||||||||||||| || ||| | ||| | ||| ||||||||| |||| |||||||||    
T  20183778 ttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcctttaagttt 20183876  T
Q  226 caaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||  ||||||||| ||| ||||| |||||||| |||||||| |||||||||| ||||    
T  20183877 caaaaatttcaaataagtcattttagttgataaattatttcactgttacccctgttgtc 20183935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 41020242 - 41020137
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    ||||||||||||||||||| | |||| ||||| |||||||||| |||||||| |||||| || |||||||||||||||||| | |||| | |  ||||||    
T  41020242 tccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtttgacagaatttctaagttaattctttaag 41020144  T
Q  223 tttcaaa 229  Q
    |||||||    
T  41020143 tttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 4187545 - 4187626
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 238  Q
    ||||||||| |||||||||||||||||  |||| |||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  4187545 tttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 21433391 - 21433278
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaagtt 224  Q
    ||||||||||||| || |||||| ||| |  |||||||||| |||||||||| || || ||||| |||||||||||||||||||| ||| | ||||||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtt 21433292  T
Q  225 tcaaatgtttcaaa 238  Q
    |||||  |||||||    
T  21433291 tcaaaaatttcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 42990539 - 42990658
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||  ||||| | |  ||||||||| ||| |||| || || ||| ||||| |||||    
T  42990539 tttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagttttaaaagttttaattatgtcattttagttgat 42990638  T
Q  256 aaactatttcaccgttaccc 275  Q
    | ||||||| ||||||||||    
T  42990639 acactattttaccgttaccc 42990658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 8040266 - 8040114
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||| ||  || | |||| ||||| ||||||||||| ||| |||||| ||| || |||||| ||||||||| |||||||| |||| |||||    
T  8040266 gtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaa-tcccaagttagtcctttaa 8040168  T
Q  222 gtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
             ||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||    
T  8040167 ---------gtttcaaataggtccttttagttgatgaactatttcaccgttacccctgctgtc 8040114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 10620303 - 10620238
Alignment:
Q  165 tcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    |||||||||||||||||| | ||||||||| |||||||| |||||| |||| ||||||||||||||    
T  10620303 tcgaaagtttcaattaggcccttttagtttaacagaatttccaagtaagtcctttaagtttcaaat 10620238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 19925104 - 19925228
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||||||| || | |||| ||| |  || |||||||||||||||||||||| || ||||||||||||| |||| |||| | ||||     
T  19925104 ttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatttccaa-ttagtcc 19925202  T
Q  217 tttaagtttcaaatgtttcaaatagg 242  Q
    |||||||||||||  | |||||||||    
T  19925203 tttaagtttcaaaaatatcaaatagg 19925228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 20366658 - 20366521
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||  ||| || | |||| |||||  |||||||||| |||||||| |  || || ||||||||||||| ||||| ||||| |||| ||||     
T  20366658 gtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgcaagttagtcctttag 20366559  T
Q  222 gtttcaaatgtttcaaataggt-cttttaattgataaa 258  Q
    |||||||| |||||||||| || |||||| ||||||||    
T  20366558 gtttcaaaagtttcaaatatgtccttttagttgataaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 36566377 - 36566458
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 238  Q
    |||||||||| ||| |||||| || ||||||||||||||||| ||||| ||||| |||| ||||| ||||||| ||||||||    
T  36566377 tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatttcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 4187763 - 4187663
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcac 267  Q
    |||||| |||||| || ||||| ||||||||||||  ||||| |||| ||||| ||| ||| |||| ||||||||| ||||| |||||||||||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcac 4187664  T
Q  268 c 268  Q
    |    
T  4187663 c 4187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 6220449 - 6220351
Alignment:
Q  168 aaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttca 266  Q
    ||||||||||| ||||  ||||||||| | ||||||| ||||| |||| ||||||||||||| ||||  ||||||| |||||| ||||||||||||||||    
T  6220449 aaagtttcaataaggtacttttagtttcatagaattctcaagttagtc-tttaagtttcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 33879576 - 33879470
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||| ||||||| || | |||| ||| |  |||||||||| |||||||||| |||||| |||||||| |||| ||||||||||| ||||  ||||    
T  33879576 gtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtc-cttaa 33879478  T
Q  222 gtttcaaa 229  Q
    ||||||||    
T  33879477 gtttcaaa 33879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 1286834 - 1286768
Alignment:
Q  212 agtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 278  Q
    |||| ||||||||| ||| |||| ||||| |||||||| |||||||| |||||||||||||||||||    
T  1286834 agtcctttaagttttaaaagttttaaatatgtcttttagttgataaattatttcaccgttacccctg 1286768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 1441011 - 1441065
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 177  Q
    |||||||||||||||| || |||||| ||||||||||||||||| ||||||||||    
T  1441011 tccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaa 1441065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 28104300 - 28104394
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacc 274  Q
    |||| |||||||||| || ||||| ||||  |||||||||||||||||| |||| ||||| ||| ||||| |||||||| |||||||| ||||||    
T  28104300 ggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgttacc 28104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 27995615 - 27995538
Alignment:
Q  207 aagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||| |||| ||||||||||||| |||| |||||| || ||||| ||||||||||||||||||||||| |||| ||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttactcctgttgtc 27995538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 1441014 - 1441066
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa 238  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| ||||||||    
T  1441014 ttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaa 1441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 5075325 - 5075444
Alignment:
Q  96 tatattttaggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagttt 194  Q
    |||||||||||||||| ||||| || | | |||||||||||||| | ||| ||| |||||  |||||||||  ||||||||||||  ||| ||||| |||    
T  5075325 tatattttaggtcaaatatcatgtttgattcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcctttta-ttt 5075423  T
Q  195 gacagaattcccaagtcagtc 215  Q
    |||||||||| ||||| ||||    
T  5075424 gacagaattctcaagttagtc 5075444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 5805041 - 5805104
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||| || ||||||| ||||||    
T  5805041 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtc 5805104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 240
Target Start/End: Complemental strand, 29591171 - 29591057
Alignment:
Q  128 ttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt--cagtcatttaagttt 225  Q
    ||||||||| |||| |  ||| |||||  |||||||||| ||||||| ||||||||||||||||||||||| ||| | |||||   | || |||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagttt 29591072  T
Q  226 caaatgtttcaaata 240  Q
    |||| |||| |||||    
T  29591071 caaaagttttaaata 29591057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 35214871 - 35214942
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||| ||| |||||| |||||| ||||||||    
T  35214871 gtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagtt 35214942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 19925397 - 19925327
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||| || |||||| |||||  |||||||||| |||||||||| |||||| ||| ||||    
T  19925397 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagtt 19925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 34951521 - 34951415
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || | | || | |||  |||||||||| ||||| | || || | | ||||||||||||| ||||| ||||| |||||||||||    
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaag 34951422  T
Q  223 tttcaaa 229  Q
    |||||||    
T  34951421 tttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 40904755 - 40904837
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 204  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| || ||||| |||||||||||||    
T  40904755 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 40904837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 5559110 - 5559171
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagt-catttaagtttcaaatgtttcaaatag 241  Q
    |||| ||||| ||||||||||||||||||| ||| | ||||||||||||| |||||||||||    
T  5559110 ggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatag 5559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 28104279 - 28104372
Alignment:
Q  100 ttttaggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||| || ||||| |||||||||||||| ||||| || |||  ||||  |||||||||| ||||||| || || ||| ||||||||    
T  28104279 ttttaggtcaaatattattttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagtt 28104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 31893498 - 31893438
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 229  Q
    ||||||||| || ||| ||||||||||||| ||||| ||||| |||| |||||||||||||    
T  31893498 aagtttcaaataagtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaa 31893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 33879349 - 33879417
Alignment:
Q  156 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||| |||||||| |||||| || ||||| ||||||||||||  ||||| |||||||| ||||    
T  33879349 ttttaagttttgaaagttttaattagatccttttattttgacagaattatcaagttagtcattttagtt 33879417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 5805654 - 5805583
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||  || |  ||| ||| | ||||||||||| |||||||||| |||||||||||||||    
T  5805654 gtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagtt 5805583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 21433207 - 21433282
Alignment:
Q  121 agtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttga 196  Q
    |||||||||||||||| | || |||||| |||||  |||||||||| |||||||||| || ||  |||||||||||    
T  21433207 agtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 31176017 - 31175946
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||||||||||| || | |||| |||||  |||||||||| ||||||||||  ||||| ||||||||    
T  31176017 gtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 31893597 - 31893534
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| |||||||||||||||||| | |||| |||| ||||||||| ||| ||||||| ||||||    
T  31893597 ggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtc 31893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 34951291 - 34951362
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||| ||||||||||| ||  || |||||  |||||||||| |||||||||| || ||||||||||||    
T  34951291 gtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaaataagtcattttagtt 34951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 36566281 - 36566344
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| |||||||||||||||||||  |||| ||||||||||||||  || ||||||| ||||||    
T  36566281 ggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtc 36566344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 36566568 - 36566525
Alignment:
Q  187 tttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||    
T  36566568 tttagtttgacagaatttccaagttagtcttttaagtttcaaat 36566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 31893258 - 31893316
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    ||||||||||||||||||| ||||| |||  |||||||||| || ||||||| ||||||    
T  31893258 ttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtc 31893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 33235039 - 33235100
Alignment:
Q  183 tcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||||||||||||||||||||| ||||| | || ||||| ||| ||| ||||||| ||||||    
T  33235039 tcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtc 33235100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 4187573 - 4187625
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaa 177  Q
    ||||| ||||||||||| |||||| |||||  |||||||||| ||||||||||    
T  4187573 ctttttgtttgacataattcccaagttagttctttaagtttcaaaagtttcaa 4187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||| || |  ||| |||||  |||||||||| |||||||||| |||||| ||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 27995064 - 27995112
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaa 229  Q
    |||| ||||||||||||||||||| ||||| |||  |||||||||||||    
T  27995064 ggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaa 27995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 34951583 - 34951527
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    |||| ||||||||||||||||||  ||||| |||| |||||||||| || |||||||    
T  34951583 ggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaa 34951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 126 - 276
Target Start/End: Complemental strand, 36418516 - 36418365
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagttt 225  Q
    |||||||||||||||| || ||| |||||  |||| ||||| ||||||||||||||||| ||||||||||||| ||||  ||||| |||| |||||||||    
T  36418516 ttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtcctttaagttt 36418417  T
Q  226 caaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccc 276  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36418416 caaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 36418365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 275
Target Start/End: Original strand, 20728527 - 20728686
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||| ||||||||||||| || | |||| |||||  ||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||     
T  20728527 ttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtcc 20728626  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    ||||||||| ||| |||||||||| ||| ||||| |||| ||||||||||||||||||||    
T  20728627 tttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttaccc 20728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 271
Target Start/End: Original strand, 13543083 - 13543241
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaag---tcag 213  Q
    |||| |||||||||||||||||||| ||| || ||| |  |||||||||||||||||||||||||||| |||||||||||  ||||| |||||   | ||    
T  13543083 ttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttattag 13543182  T
Q  214 tcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 271  Q
    || ||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||    
T  13543183 tcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgtt 13543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 123 - 275
Target Start/End: Complemental strand, 30738377 - 30738223
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || | | || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||  ||| |||| |    
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaatttt-aattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  223 tttcaaatgtttcaaataggtc-ttttaat--tgataaactatttcaccgttaccc 275  Q
    ||||||| |||||||||| ||| ||||| |  ||||||||||||||||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttaccc 30738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 18248996 - 18249124
Alignment:
Q  156 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattga 254  Q
    ||||| |||| |||||||| || || ||| ||||||||| ||||||||| ||||| |||||||||||||||||| |||| ||||||||| ||||| ||||    
T  18248996 ttttacgttttgaaagttttaactatgtccttttagtttaacagaattctcaagttagtcatttaagtttcaaaagttttaaataggtctttttagttga 18249095  T
Q  255 taaactatttcaccgttacccctgatgtc 283  Q
    |||||||||||| ||||||||||| ||||    
T  18249096 taaactatttcatcgttacccctgctgtc 18249124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 283
Target Start/End: Original strand, 5734502 - 5734628
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||||| |||| | || ||||||||| ||| |||||||||| ||| ||||| || ||    
T  5734502 tttaagttttgaaagtttcaattatgtcattttaatttgacagaattcctaagtta-tcctttaagttttaaaagtttcaaataagtcattttagttaat 5734600  T
Q  256 aaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||||||||||||| ||||    
T  5734601 aaactatttcaccgttacccctgctgtc 5734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 104 - 270
Target Start/End: Complemental strand, 6336458 - 6336298
Alignment:
Q  104 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtatttt-aagtttcgaaagtttcaattaggtcattttagtttgacagaat 202  Q
    |||||||| |||||||| ||||||||||||||||||||        ||||| |||| |||||||||||||||||||||| |  ||||| |||| ||||||    
T  6336458 aggtcaaatatcattttggtccttttagtttgacataa--------ttagtctttttaagtttcgaaagtttcaattagattcttttaatttgtcagaat 6336367  T
Q  203 tcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgt 270  Q
    ||| |||| |||| ||||| |||||||||||||||||| || |||| | ||||||||||||||||||||    
T  6336366 tcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgataaactatttcaccgt 6336298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 278
Target Start/End: Complemental strand, 5735100 - 5734944
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||||   || || ||| |||||  ||||| |||||||| ||| ||||| ||| ||||||||| ||||||||| ||||| |||| |||||    
T  5735100 gtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtcctttaa 5735001  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    ||| |||| |||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  5735000 gtt-caaaagtttcaaataggtcattttagttgataaactatttcaccattacccctg 5734944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 32660266 - 32660379
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||| ||| || || ||| |||||  |||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  225 tcaaatgtttcaaa 238  Q
    ||||| ||||||||    
T  32660366 tcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 30737779 - 30737900
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaa-ttgat 255  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||| | |||| ||||||||||||| |||| ||||| ||| ||||| |||||    
T  30737779 tttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagtttcaaaagttttaaataagtcatttaagttgat 30737878  T
Q  256 aaactatttcaccgttacccct 277  Q
    ||||| ||| ||||||||||||    
T  30737879 aaactgttttaccgttacccct 30737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 6336147 - 6336263
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||| || || | |||| |||||  |||||||||| ||||||| || |||||||||||||||||| |||||| |||||| |||| |||||    
T  6336147 gtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtcctttaa 6336246  T
Q  222 gtttcaaatgtttcaaa 238  Q
    |||||||| ||||||||    
T  6336247 gtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 32459430 - 32459525
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||| |||||||    
T  32459430 ggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 32459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 35189898 - 35190024
Alignment:
Q  103 taggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 201  Q
    ||||||||| |||| |||||||| ||||| ||||| | || || ||| ||||| ||| ||||||||||||||| || |||||||||||||||||||||||    
T  35189898 taggtcaaatatcacttttagtcattttaatttgatagaattctcaagttagtcttt-aagtttcgaaagttttaaataggtcattttagtttgacagaa 35189996  T
Q  202 ttcccaagtcagtcatttaagtttcaaa 229  Q
     |||||||| |||| |||||||||||||    
T  35189997 ctcccaagttagtcctttaagtttcaaa 35190024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 244
Target Start/End: Original strand, 18951307 - 18951429
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || |||||| |||||  |||||||||| ||||||| || ||| || ||||||||||| ||||||| ||||| |||| |||||    
T  18951307 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtcctttaa 18951406  T
Q  222 gtttcaaatgtttcaaataggtc 244  Q
    |||| ||| |||| |||||||||    
T  18951407 gttttaaaagttttaaataggtc 18951429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 26275511 - 26275616
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||||| || | | || |||||  |||||||||| |||||||||| ||| ||||||||||||||| |||||||||||| ||||||| |||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagtt 26275610  T
Q  225 tcaaat 230  Q
    ||||||    
T  26275611 tcaaat 26275616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 32660238 - 32660325
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||||||||||||||||||||||| ||  ||||||||| ||| ||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  32660238 tttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtc 32660325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 13538468 - 13538625
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-- 214  Q
    |||| |||||||||||||||||||| ||| || |||||  |||| |||||||||||||||||||||||  |||||||||| ||||||  ||||| | |      
T  13538468 ttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagttattag 13538567  T
Q  215 --catttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 278  Q
      | |||||||||||||| | |||        ||||| ||||||||||||||||||||||||||||    
T  13538568 tccttttaagtttcaaatatgtca--------ttttagttgataaactatttcaccgttacccctg 13538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 36417891 - 36417998
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||| ||| || || ||| |||||  ||||| |||||||||||||||||||||  |||| |||||||| ||||| ||||| |||| ||||||    
T  36417891 tccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcctttaag 36417990  T
Q  223 tttcaaat 230  Q
    ||||||||    
T  36417991 tttcaaat 36417998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 274
Target Start/End: Complemental strand, 13543727 - 13543569
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    ||||| || ||||||||||||| || || ||| ||||| |||||| |||| |||||||  |  || || ||||||||||  |||||||  |||| | ||     
T  13543727 ttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaattcttaagttaatcc 13543628  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 274  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||    
T  13543627 tttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacc 13543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 20729100 - 20729010
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 275  Q
    ||||||||||||||||||  ||||| |||| ||||| ||| ||| ||||||||||||| |||||| |||||||||||||||||| ||||||    
T  20729100 ttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattaccc 20729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 38405654 - 38405573
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 204  Q
    |||||||||||| ||| || |||||| ||| |  |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38405654 tccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattc 38405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 18238390 - 18238306
Alignment:
Q  190 agtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 273  Q
    ||||||||| |||| |||||| |||| ||||||||||||| |||| ||||||||| ||||| |||||||| ||||||||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttcaccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 35891317 - 35891219
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaat-aggtcttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||||| || | ||||  |||||||||||||||| ||||||||||| ||||    
T  35891317 ttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttcagcgttacccctgctgtc 35891219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 31814003 - 31813954
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  31814003 ggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaat 31813954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 1722504 - 1722648
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||| ||| || || ||| |||||  ||||| |||| ||||||| || ||| |  ||||||||||||| ||||| ||||| | || |||||    
T  1722504 gtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 1722603  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttc 265  Q
    |||||||| |||||||||| ||| ||||| || ||||| ||||||    
T  1722604 gtttcaaaagtttcaaatatgtcattttagtttataaattatttc 1722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 18951306 - 18951366
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||    
T  18951306 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatag 18951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 35190497 - 35190426
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaa 228  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||| ||| |  ||| ||||||||||||    
T  35190497 tttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgtcttttaagtttcaa 35190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 14235567 - 14235688
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||| |||| |   || |||||  ||||||||   ||||||| ||||||||| ||||||||||||||||||| ||||| ||||     
T  14235567 ttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaattctcaagttagtcc 14235666  T
Q  217 tttaagtttcaaatgtttcaaata 240  Q
    |||  |||||| | ||||||||||    
T  14235667 ttt--gtttcacaagtttcaaata 14235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 32459426 - 32459502
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| ||||||||||||||||| || || ||| |||||  |||||||||| ||||||| || |||||||||||||||    
T  32459426 ttttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 32459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 6336146 - 6336209
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| |||||||||| ||||||| |||||| |||| ||||||||||||| |||| |||||||||    
T  6336146 ggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtc 6336209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 36418460 - 36418389
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||| |||||||||| |||||| ||||||||    
T  36418460 gtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 36418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 18951368 - 18951449
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 204  Q
    |||||||||||||| | || || ||| |||||  |||||||||  ||||||| || |||||||||||||||||| |||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattc 18951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 275
Target Start/End: Original strand, 19278710 - 19278862
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||||||| || ||  || |||||  ||||| |||| ||| ||| |||||| |  ||||||||||||||||||| ||||| |    ||||||    
T  19278710 tccttttagtttgacagaattcttaagttagtcctttaaatttcaaaatttt-aattagcttcttttagtttgacagaattctcaagttacctctttaag 19278808  T
Q  223 tttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttaccc 275  Q
    ||||||   |||||||||  || ||||| ||||||||||||||||| |||||||    
T  19278809 tttcaataatttcaaataaatcattttagttgataaactatttcactgttaccc 19278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 32459911 - 32459822
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacc 274  Q
    |||| ||||||| |||||| ||| | |||| ||||||||| |||  |||||||||||| |||||| | ||||||||||||||| ||||||    
T  32459911 ttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttcactgttacc 32459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 1723044 - 1722933
Alignment:
Q  173 ttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgtt 271  Q
    ||||||||  || ||||||||| ||| |||| | |||| |||  ||||||||| ||| |||| |||||  || ||||| ||||||||||||||||| |||    
T  1723044 ttcaattaaatccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgtt 1722945  T
Q  272 acccctgatgtc 283  Q
    ||||||| ||||    
T  1722944 acccctgctgtc 1722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 26275512 - 26275567
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
    |||||||||||||||||| | |||| |||  ||||||||||||| |||||||||||    
T  26275512 ttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatag 26275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 26276055 - 26275971
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtcttttaattgataaactatttcaccgttacccctg 278  Q
    ||||||||||||| |||| |||||| |||| |||||||||||||| | ||        |||||| ||||||| ||||||||||||||||||||    
T  26276055 ttttagtttgacaaaatttccaagttagtcctttaagtttcaaatatgtc--------cttttagttgataagctatttcaccgttacccctg 26275971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 30737808 - 30737875
Alignment:
Q  126 ttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||||||||||||||| || ||| ||||| ||||||||||| ||||||| || || ||||||| ||||    
T  30737808 ttttagtttgacataattctcaaattagtcttttaagtttcaaaagttttaaataagtcatttaagtt 30737875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 36418521 - 36418458
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc 244  Q
    |||| ||||||||||||| ||||| ||||| |||| |||| |||||||| ||||||| ||||||    
T  36418521 ggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtc 36418458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 38405651 - 38405600
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaa 237  Q
    ||||||||| ||||||||||||||| | ||||||||||||| || |||||||    
T  38405651 ttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaa 38405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 18237920 - 18238010
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttaccc 275  Q
    ||||||||||||||||||   |||| | || ||||||||| ||| |||| ||||| || |||||| |||||||| |||||||| |||||||    
T  18237920 ttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttaccc 18238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 31813948 - 31813894
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaata 240  Q
    ||||||||||||||||||| |||||  ||||||| | ||||||| ||||||||||    
T  31813948 ttttagtttgacagaattctcaagtatgtcattttaatttcaaaagtttcaaata 31813894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 101 - 283
Target Start/End: Complemental strand, 31247786 - 31247602
Alignment:
Q  101 tttaggtcaaaaatca-ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacag 199  Q
    |||||| |||| |||| |||| ||||||||| ||||||| || | |||| |||||  |||||||||||||||||||||||||||| |||||||| |||||    
T  31247786 tttaggccaaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacag 31247687  T
Q  200 aattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||| |||  ||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||  ||||||||| ||||    
T  31247686 aattcccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacccctgttgtc 31247602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 283
Target Start/End: Original strand, 4276174 - 4276301
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| ||||   | || |||  ||||||||||||| ||||||||||| || ||||| |||||    
T  4276174 tttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttctttaagtttcaaaagtttcaaatagttcattttagttgat 4276273  T
Q  256 aaactatttcaccgttacccctgatgtc 283  Q
    |||||||||||| |||||||||| ||||    
T  4276274 aaactatttcactgttacccctgctgtc 4276301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 21377119 - 21377036
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcc 205  Q
    ||||||||||||||||| || | |||| ||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  21377119 gtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataattcc 21377036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 35555565 - 35555688
Alignment:
Q  156 ttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattga 254  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||  ||||| ||||  |||| |||  || ||||||||||  || ||||| ||||    
T  35555565 ttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtccattaaattttgaaagtttcaaataaatcattttagttga 35555664  T
Q  255 taaactatttcaccgttacccctg 278  Q
    |||||||||||||||||| |||||    
T  35555665 taaactatttcaccgttatccctg 35555688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 50530230 - 50530332
Alignment:
Q  103 taggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaa 201  Q
    ||||||||| |||||||| | |||||||||||||||| || |  ||| ||||| ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  50530230 taggtcaaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaa 50530329  T
Q  202 ttc 204  Q
    |||    
T  50530330 ttc 50530332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 4276689 - 4276628
Alignment:
Q  169 aagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaat 230  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttcaaat 4276628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 3088218 - 3088066
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |  ||| ||| |  ||||| |||||||||||||||||| ||| |||||||||||||  ||| || ||| ||||     
T  3088218 ttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcc 3088119  T
Q  217 tttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccct 277  Q
    ||||||||||         |||||||| ||||||||||||||||||||||||||||| ||||    
T  3088118 tttaagtttc---------aaataggtccttttaattgataaactatttcaccgttatccct 3088066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 21376565 - 21376732
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||||||||||||| ||||||  ||||   || ||||  |||||| |||  ||||||| ||||| ||  ||||||||||| ||||||  || ||  |||     
T  21376565 ttttagtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttcaggttggtcc 21376664  T
Q  217 tttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||| ||| ||||    
T  21376665 tttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttaccactgctgtc 21376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 14964648 - 14964749
Alignment:
Q  123 tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaag 222  Q
    |||||||||||| || ||| |||||| ||||| ||| |||||| |||||||||||||| ||| ||||||||||||||||||| ||| | |||| ||| ||    
T  14964648 tccttttagtttaacttaattcccaagttagtcttt-aagttttgaaagtttcaattatgtctttttagtttgacagaattctcaaataagtccttttag 14964746  T
Q  223 ttt 225  Q
    |||    
T  14964747 ttt 14964749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 273
Target Start/End: Original strand, 19153885 - 19153974
Alignment:
Q  186 ttttagtttgacagaattcc-caagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttac 273  Q
    ||||||||||||||||||   ||||| ||| ||||||||||||||||||||||||| ||| ||||| |||||||| |||||||| |||||    
T  19153885 ttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaattatttcactgttac 19153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 54456679 - 54456764
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgt 270  Q
    |||||||||||||||||| | || | ||||||||||||||| || |||||||||| ||| ||||| ||||||||||| ||||||||    
T  54456679 ttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaattcaccgt 54456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 54456912 - 54456799
Alignment:
Q  125 cttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtt 224  Q
    |||||||||||| | |||| |||| ||| |   |||||| || |||||||||| |||||| ||||| ||||||| |||| |||||| |||| ||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  225 tcaaatgtttcaaa 238  Q
    ||||| ||||||||    
T  54456812 tcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 54456651 - 54456746
Alignment:
Q  99 attttaggtcaaaaatcattttag-tccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| |||||||| |||||||| | |||||||||||||||| || | | || |||||  ||||||||||||||||||||| || ||||||||||||    
T  54456651 atttaaggtcaaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagtt 54456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 31247195 - 31247292
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    ||||||||||||| ||||| ||||| |||| ||||||||||||| |||||||||| || || ||| |||||||||||||| || ||||| |||| ||||    
T  31247195 ttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagttgataaactattttactgttactcctgctgtc 31247292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 283
Target Start/End: Original strand, 14629288 - 14629382
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaatagg-tcttttaattgataaactatttcaccgttacccctga 279  Q
    |||| ||||| ||||||||||||||||||| |||| |||||         |||||||||||| ||||||| |||||||| |||||||||||||||||||     
T  14629288 ggtccttttactttgacagaattcccaagttagtcctttaa---------gtttcaaataggttcttttagttgataaattatttcaccgttacccctgt 14629378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 21410355 - 21410273
Alignment:
Q  193 ttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaa-taggtc-ttttaattgataaactatttcaccgttacc 274  Q
    ||||||||||||| |||||| |||||||||||||||| |||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  21410355 ttgacagaattcc-aagtcaatcatttaagtttcaaaagttttaaattatgtcattttagttgataaactatttcactgttacc 21410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 24707475 - 24707558
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcacc 268  Q
    ||||||||| |||||||| |||||| |||| |||||||||  || |||| |||||  || ||||| ||||||||||||||||||    
T  24707475 ttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttcacc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 5505822 - 5505741
Alignment:
Q  161 agtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagt-catttaagtttcaaatgtttcaaatag 241  Q
    ||||||||||||||||||||| || |||| |||||||| |||| | || | ||| | ||||||||||||| |||| ||||||    
T  5505822 agtttcgaaagtttcaattagatcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatag 5505741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 5505800 - 5505692
Alignment:
Q  123 tccttttagtttgacataactcccaatttagta-ttttaagtttcgaaagtttcaattaggtcattttag-tttgacagaattcccaagtcagtcattta 220  Q
    ||||||| ||||||||||| | | || |||||  ||||||||||| ||||||| || ||| || |||||| ||| |||||||| | |||| |||| ||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttttaacagaatttctaagttagtccttta 5505701  T
Q  221 agtttcaaa 229  Q
    |||||||||    
T  5505700 agtttcaaa 5505692  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 54456940 - 54456844
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 252  Q
    ||||||||| ||||| ||||||||| |  ||||||||||| |||| | |||| | | ||  |||||| ||||| ||||||||||||| |||||||||    
T  54456940 tttaagtttagaaagcttcaattagattcttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatt 54456844  T

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Target: scaffold0070 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 28548 - 28705
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||| ||||||| || | |||| |||||  ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| |||||    
T  28548 gtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaa 28647  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
      |||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  28648 aattcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccctg 28705  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 28547 - 28619
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaatt 252  Q
    |||| ||||| |||||||||||| |||||| |||| |||||||||  || ||||||| ||||| |||||||||    
T  28547 ggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatt 28619  T

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Target: scaffold0019 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 124482 - 124351
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| |||||||| |||||| |||| |||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||     
T  124482 ttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcc 124383  T
Q  217 tttaagtttcaaatgtttcaaataggtctttt 248  Q
    |||||||||| || ||||||| ||||||||||    
T  124382 tttaagtttcgaaagtttcaattaggtctttt 124351  T

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Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 124417 - 124329
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagt 210  Q
    ||||||||||||||||| || | |||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  124417 gtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagt 124329  T

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Target: scaffold0019; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 124142 - 124262
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtca 216  Q
    |||| ||||||||||||||||| || |||||| |||||  |||||||||| ||||||||||  ||||  ||||||||||||||||||||||| | ||||     
T  124142 ttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttagtc- 124240  T
Q  217 tttaagtttcaaatgtttcaaa 238  Q
    ||||||||||||| ||||||||    
T  124241 tttaagtttcaaaagtttcaaa 124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 124146 - 124208
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggt 243  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||||| |||||||| ||||    
T  124146 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggt 124208  T

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Target: scaffold0746 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 620 - 498
Alignment:
Q  157 tttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgat 255  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| ||||| ||||||| |||||||||||||| ||||| |||||    
T  620 tttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagttgat 521  T
Q  256 aaactatttcaccgttacccctg 278  Q
    |||||||||||| ||||||||||    
T  520 aaactatttcactgttacccctg 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 25 - 186
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    |||||||||||||||||||| || ||| |||||  || ||||||| ||||||| || ||  || |||||||||||| ||||||| |||| ||| ||||||    
T  25 gtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagt-atttaa 123  T
Q  222 gtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||| ||| |||||||||| ||| ||||| ||||||||||||||||| ||||| |||| ||||    
T  124 gtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttactcctgttgtc 186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 595 - 524
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    ||||||||| ||||||| || || ||| |||||  ||||| |||| |||||||||| |||||||||||||||    
T  595 gtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagtt 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 45341 - 45204
Alignment:
Q  104 aggtcaaaaatcattttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 203  Q
    |||||||| | || ||| |||||||| ||||||||||| || ||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  45341 aggtcaaataccactttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataatt 45242  T
Q  204 cccaagtcagtcatttaagtttcaaatgtttcaaatag 241  Q
      ||| | |||||||||||||| ||| |||||||||||    
T  45241 ttcaaattagtcatttaagttttaaaagtttcaaatag 45204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 45263 - 45181
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattc 204  Q
    |||||||||||||||||||| |  ||| |||||  |||||||||  |||||||||| ||| || ||||| |||||||||||||    
T  45263 gtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattc 45181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 9377 - 9546
Alignment:
Q  102 ttaggtcaaaaatcatttta-gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacaga 200  Q
    |||||||||| ||||||||  ||||||||||||||||| || ||  || |||||  ||||||||||| |||||||||||||||| ||||||||| | |||    
T  9377 ttaggtcaaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaataga 9476  T
Q  201 attcccaagtcagtcatttaagtttcaaatgtttcaaataggt-cttttaattgataaactatttcaccgttacccctg 278  Q
    |||| ||||| |||  |||||         ||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  9477 attctcaagttagttctttaa---------gtttcaaataggtccttttagttgataaactatttcactgttacccctg 9546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 9993 - 9891
Alignment:
Q  122 gtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcccaagtcagtcatttaa 221  Q
    ||||||||||||||||| || || ||| |||||  ||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| |    
T  9993 gtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagtcctttta 9894  T
Q  222 gtt 224  Q
    |||    
T  9893 gtt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 16176 - 16274
Alignment:
Q  181 ggtcattttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctg 278  Q
    |||| ||||||||||| | |||| |||| | |||| ||||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  16176 ggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactatttcaccgttacccctg 16274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 16663 - 16565
Alignment:
Q  186 ttttagtttgacagaattcccaagtcagtcatttaagtttcaaatgtttcaaataggtc-ttttaattgataaactatttcaccgttacccctgatgtc 283  Q
    |||| |||||| | |||| |||||| | || ||||||||| ||| |||| ||||| ||| ||||| ||||||||||||||||| |||| ||||| ||||    
T  16663 tttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactatttcacagttatccctgttgtc 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 16172 - 16248
Alignment:
Q  117 ttttagtccttttagtttgacataactcccaatttagtattttaagtttcgaaagtttcaattaggtcattttagtt 193  Q
    |||| ||||||||||||||| | || | |||| |||||  |||||||||  ||||||| || |||||||||||||||    
T  16172 ttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagtt 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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