View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6692_low_29 (Length: 270)

Name: NF6692_low_29
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6692_low_29
NF6692_low_29
[»] chr3 (32 HSPs)
chr3 (125-270)||(40806746-40806891)
chr3 (125-270)||(5206760-5206905)
chr3 (126-270)||(30175671-30175815)
chr3 (125-270)||(13031882-13032027)
chr3 (125-270)||(17537879-17538025)
chr3 (125-270)||(15932611-15932756)
chr3 (125-270)||(17520127-17520272)
chr3 (125-270)||(31225060-31225205)
chr3 (125-270)||(11258175-11258320)
chr3 (125-270)||(15448103-15448248)
chr3 (148-270)||(31414968-31415090)
chr3 (148-270)||(22147877-22148000)
chr3 (148-270)||(37642588-37642711)
chr3 (220-270)||(40811656-40811706)
chr3 (170-270)||(23413761-23413862)
chr3 (176-270)||(45796681-45796776)
chr3 (176-270)||(14497027-14497122)
chr3 (224-270)||(17534924-17534970)
chr3 (230-270)||(2842624-2842664)
chr3 (232-270)||(5214775-5214813)
chr3 (232-270)||(10542977-10543015)
chr3 (232-270)||(10562531-10562569)
chr3 (232-270)||(11886915-11886953)
chr3 (232-270)||(16044262-16044300)
chr3 (232-270)||(16049738-16049776)
chr3 (232-270)||(16728182-16728220)
chr3 (232-270)||(18700832-18700870)
chr3 (232-270)||(35353413-35353451)
chr3 (232-270)||(43890142-43890180)
chr3 (232-270)||(44269452-44269490)
chr3 (232-270)||(45531741-45531779)
chr3 (174-218)||(17669089-17669133)
[»] chr7 (17 HSPs)
chr7 (126-270)||(46387196-46387340)
chr7 (127-270)||(61576-61719)
chr7 (125-270)||(8852322-8852467)
chr7 (126-270)||(18075641-18075785)
chr7 (148-270)||(38479796-38479918)
chr7 (148-270)||(19487009-19487132)
chr7 (168-221)||(17064443-17064496)
chr7 (170-270)||(1543534-1543635)
chr7 (232-270)||(4070615-4070653)
chr7 (232-270)||(14220210-14220248)
chr7 (232-270)||(16461463-16461501)
chr7 (232-270)||(16579331-16579369)
chr7 (232-270)||(16586293-16586331)
chr7 (232-270)||(33000851-33000889)
chr7 (232-270)||(47094021-47094059)
chr7 (233-270)||(1868290-1868327)
chr7 (233-270)||(20220484-20220521)
[»] scaffold0371 (1 HSPs)
scaffold0371 (125-270)||(2633-2778)
[»] chr8 (12 HSPs)
chr8 (125-270)||(24712971-24713116)
chr8 (126-270)||(33587148-33587292)
chr8 (125-266)||(39937171-39937312)
chr8 (127-270)||(18760182-18760325)
chr8 (126-270)||(23944284-23944429)
chr8 (161-269)||(19801780-19801888)
chr8 (232-270)||(5760271-5760309)
chr8 (232-270)||(17908053-17908091)
chr8 (232-270)||(22207072-22207110)
chr8 (232-270)||(22244294-22244332)
chr8 (232-270)||(23888615-23888653)
chr8 (233-270)||(17439839-17439876)
[»] chr2 (14 HSPs)
chr2 (125-270)||(24435803-24435948)
chr2 (125-270)||(22252777-22252921)
chr2 (126-270)||(23969800-23969945)
chr2 (127-270)||(6575989-6576132)
chr2 (125-270)||(19202361-19202507)
chr2 (148-270)||(24865917-24866039)
chr2 (148-266)||(7672608-7672726)
chr2 (201-266)||(20913172-20913237)
chr2 (232-270)||(5985022-5985060)
chr2 (232-270)||(10897786-10897824)
chr2 (232-270)||(14693118-14693156)
chr2 (233-270)||(20520487-20520524)
chr2 (233-270)||(23791024-23791061)
chr2 (176-208)||(32215340-32215372)
[»] scaffold1283 (1 HSPs)
scaffold1283 (126-270)||(1702-1846)
[»] chr4 (20 HSPs)
chr4 (126-270)||(11424691-11424835)
chr4 (126-270)||(53631708-53631852)
chr4 (128-269)||(21815992-21816133)
chr4 (161-269)||(6190161-6190269)
chr4 (129-270)||(19609035-19609176)
chr4 (148-270)||(33185767-33185889)
chr4 (148-270)||(22353478-22353601)
chr4 (167-223)||(19561641-19561697)
chr4 (168-270)||(15869218-15869320)
chr4 (176-270)||(32850895-32850990)
chr4 (232-270)||(3484879-3484917)
chr4 (232-270)||(15042286-15042324)
chr4 (232-270)||(15112100-15112138)
chr4 (232-270)||(19734230-19734268)
chr4 (232-270)||(21061417-21061455)
chr4 (232-270)||(35812595-35812633)
chr4 (232-270)||(42874641-42874679)
chr4 (233-270)||(53082486-53082523)
chr4 (232-268)||(14548554-14548590)
chr4 (234-270)||(16997371-16997407)
[»] chr6 (10 HSPs)
chr6 (127-270)||(31733500-31733643)
chr6 (126-270)||(17319227-17319371)
chr6 (125-264)||(18708206-18708345)
chr6 (125-254)||(27573446-27573575)
chr6 (129-269)||(18822208-18822348)
chr6 (148-270)||(18319406-18319528)
chr6 (231-270)||(20411900-20411939)
chr6 (232-270)||(17105406-17105444)
chr6 (232-270)||(18452969-18453007)
chr6 (232-270)||(22805506-22805544)
[»] chr1 (11 HSPs)
chr1 (125-270)||(48300613-48300758)
chr1 (125-270)||(35088225-35088370)
chr1 (148-270)||(51274689-51274811)
chr1 (232-270)||(1642376-1642414)
chr1 (232-270)||(19675595-19675633)
chr1 (232-270)||(20241671-20241709)
chr1 (232-270)||(42911893-42911931)
chr1 (233-270)||(26064689-26064726)
chr1 (233-270)||(50622278-50622315)
chr1 (233-270)||(51475909-51475946)
chr1 (233-269)||(50614451-50614487)
[»] chr5 (7 HSPs)
chr5 (125-270)||(19920465-19920610)
chr5 (126-270)||(13536511-13536655)
chr5 (125-262)||(21309131-21309268)
chr5 (148-267)||(18418203-18418322)
chr5 (148-270)||(40725499-40725622)
chr5 (233-270)||(20470249-20470286)
chr5 (233-270)||(22178554-22178591)
[»] scaffold0001 (1 HSPs)
scaffold0001 (126-270)||(76460-76604)
[»] scaffold0034 (2 HSPs)
scaffold0034 (128-269)||(52197-52338)
scaffold0034 (232-270)||(116672-116710)
[»] scaffold0503 (1 HSPs)
scaffold0503 (128-269)||(11629-11770)
[»] scaffold0064 (1 HSPs)
scaffold0064 (139-270)||(57563-57695)
[»] scaffold0047 (1 HSPs)
scaffold0047 (140-270)||(77851-77981)
[»] scaffold0031 (1 HSPs)
scaffold0031 (129-269)||(20785-20925)
[»] scaffold0056 (1 HSPs)
scaffold0056 (151-269)||(79642-79760)
[»] scaffold0071 (1 HSPs)
scaffold0071 (125-270)||(13941-14086)
[»] scaffold0230 (2 HSPs)
scaffold0230 (148-270)||(23871-23993)
scaffold0230 (148-270)||(20941-21063)
[»] scaffold1351 (1 HSPs)
scaffold1351 (148-270)||(1172-1294)
[»] scaffold0111 (2 HSPs)
scaffold0111 (205-270)||(7144-7209)
scaffold0111 (205-270)||(14263-14328)
[»] scaffold0098 (1 HSPs)
scaffold0098 (168-270)||(34655-34758)
[»] scaffold0235 (2 HSPs)
scaffold0235 (176-270)||(13076-13171)
scaffold0235 (176-270)||(24778-24873)
[»] scaffold0192 (1 HSPs)
scaffold0192 (168-270)||(9594-9697)
[»] scaffold0075 (1 HSPs)
scaffold0075 (168-270)||(8804-8907)
[»] scaffold0029 (1 HSPs)
scaffold0029 (168-270)||(74357-74460)
[»] scaffold0601 (1 HSPs)
scaffold0601 (232-270)||(8000-8038)
[»] scaffold0003 (1 HSPs)
scaffold0003 (169-218)||(95137-95186)
[»] scaffold1633 (1 HSPs)
scaffold1633 (230-270)||(109-149)
[»] scaffold1662 (1 HSPs)
scaffold1662 (232-270)||(592-630)
[»] scaffold0546 (1 HSPs)
scaffold0546 (232-270)||(10741-10779)
[»] scaffold0486 (1 HSPs)
scaffold0486 (232-270)||(8259-8297)
[»] scaffold0452 (1 HSPs)
scaffold0452 (232-270)||(13876-13914)
[»] scaffold0328 (1 HSPs)
scaffold0328 (232-270)||(19767-19805)
[»] scaffold0301 (1 HSPs)
scaffold0301 (232-270)||(10759-10797)
[»] scaffold0292 (1 HSPs)
scaffold0292 (232-270)||(4497-4535)
[»] scaffold0278 (1 HSPs)
scaffold0278 (232-270)||(7319-7357)
[»] scaffold0203 (1 HSPs)
scaffold0203 (232-270)||(19233-19271)
[»] scaffold0151 (1 HSPs)
scaffold0151 (127-173)||(23986-24032)
[»] scaffold0109 (1 HSPs)
scaffold0109 (232-270)||(1022-1060)
[»] scaffold0083 (1 HSPs)
scaffold0083 (232-270)||(7890-7928)
[»] scaffold0420 (2 HSPs)
scaffold0420 (233-270)||(6561-6598)
scaffold0420 (233-270)||(14015-14052)
[»] scaffold0090 (1 HSPs)
scaffold0090 (233-270)||(2427-2464)
[»] scaffold0077 (1 HSPs)
scaffold0077 (233-270)||(56058-56095)
[»] scaffold1792 (1 HSPs)
scaffold1792 (242-270)||(1-29)
[»] scaffold0139 (1 HSPs)
scaffold0139 (233-269)||(38182-38218)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 40806746 - 40806891
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40806746 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 40806845  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  40806846 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 40806891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 5206905 - 5206760
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5206905 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgatccatc 5206806  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  5206805 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 5206760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 30175815 - 30175671
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30175815 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacaacttacacatcttgaaccatct 30175716  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  30175715 agacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 30175671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 13032027 - 13031882
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13032027 gcacttcattaacgacacatgggtaaataacaacttaacaacaatgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 13031928  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  13031927 tagacaaaatgcaactacgacctcttaatcatgcatgtggaaccaa 13031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 17537879 - 17538025
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17537879 gcacttcattaacgacacatgtgtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 17537978  T
Q  225 -tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
     |||| ||||||||| || ||||||||||||||||||||||||||||    
T  17537979 ttagacaaaatgcaaatatgacctcttaatcatgcatgtggtaccaa 17538025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 15932756 - 15932611
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  15932756 gcacttcattaacgacacatggataaataacaacttaacaacaacaacatgacttcaactcgacaatgcaacttagacatcttacacatattgatccatc 15932657  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  15932656 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 15932611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 17520272 - 17520127
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |    
T  17520272 gcacttcattaacgacatatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaatttagacatcttacacatcttaaaccaac 17520173  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||    
T  17520172 tagacaaagtgcaactacaacctcttaatcatgcatgtggtaccaa 17520127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 31225205 - 31225060
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||| || ||||||||||||||||| |||    
T  31225205 gcacttcgttaacgacacatgaataaataacaacttaacaacaacgacacgacttcaacttaacaatgcaacttaaacttcttacacatcttgaactatc 31225106  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||    
T  31225105 tagacaaaatgcaactatgacctcttaatcatgtatgtggtaccaa 31225060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 11258175 - 11258320
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||||||    
T  11258175 gcacttcgttaacgacacatgggtaaatagcaacttaacaacaacgacacaacttcaacttaacaatgcaacttagacttcttattcatcttagaccatc 11258274  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |  | ||||||||||||| |||||||||||||||||||||||||||    
T  11258275 tcaaaaaaatgcaactacaacctcttaatcatgcatgtggtaccaa 11258320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 15448248 - 15448103
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||| |||||||||||||| ||||||||||| | ||||||||||||| |||||||||  ||||||||||||| || |||||  ||||||  ||||||    
T  15448248 gcacttcgttaacgacacatggataaataacaacgtgacaacaacgacacaacttcaacttaacaatgcaacttaaacttcttattcatcttagaccatc 15448149  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    | || ||||||||||||||| |||||||||||||||||||||||||    
T  15448148 tcgacaaaatgcaactacgatctcttaatcatgcatgtggtaccaa 15448103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 31414968 - 31415090
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||||||||||||||| ||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||||||| |  ||||||||||||| ||||    
T  31414968 taaataacaacttaacaacgacgacacaacttcaacttaacaatgcaacttagacttcttattcatcttagaccatctcgtcaaaatgcaactacaacct 31415067  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||||||||||||    
T  31415068 cttaatcatacatgtggtaccaa 31415090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 22148000 - 22147877
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga-taaaatgcaactacgacc 246  Q
    |||||||||||||||  |||||||||| |||||||||  |||||||||||||||| | |||  ||||||  ||||||| ||  ||||||||||||| |||    
T  22148000 taaataacaacttaatcacaacgacacaacttcaacttaacaatgcaacttagaccttttattcatcttagaccatcttgacaaaaatgcaactacaacc 22147901  T
Q  247 tcttaatcatgcatgtggtaccaa 270  Q
    ||||| ||||||||||||||||||    
T  22147900 tcttagtcatgcatgtggtaccaa 22147877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 37642711 - 37642588
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacc 246  Q
    |||||||||||||||  | |||||||| || ||||||  ||||||||||||||||||||||  ||||||  ||| ||| || |||| ||||||||| |||    
T  37642711 taaataacaacttaatcataacgacacaacctcaacttaacaatgcaacttagacatcttattcatcttagaccctcttgacaaaaatgcaactacaacc 37642612  T
Q  247 tcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||||||||||||||||    
T  37642611 tcttaatcatgcatgtggtaccaa 37642588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 40811656 - 40811706
Alignment:
Q  220 ccatctagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40811656 ccatctagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 40811706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 23413862 - 23413761
Alignment:
Q  170 gacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtacc 268  Q
    ||||| |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||||    
T  23413862 gacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgtggtacc 23413763  T
Q  269 aa 270  Q
    ||    
T  23413762 aa 23413761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 45796681 - 45796776
Alignment:
Q  176 acttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  45796681 acttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgtggtaccaa 45796776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 14497027 - 14497122
Alignment:
Q  176 acttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| ||||||||||||| |||||||||||||    
T  14497027 acttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcattcatgtggtaccaa 14497122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 17534970 - 17534924
Alignment:
Q  224 ctagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  17534970 ctagacaaagtgcaactacaacctcttaatcatgcatgtggtaccaa 17534924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 2842664 - 2842624
Alignment:
Q  230 aaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  2842664 aaaatgcaacttcgacttcttaatcatgcatgtggtaccaa 2842624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 5214775 - 5214813
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  5214775 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 5214813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 10543015 - 10542977
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  10543015 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 10542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 10562531 - 10562569
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  10562531 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 10562569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 11886953 - 11886915
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  11886953 aatgcaactacaacttcttaatcatgcatgtggtaccaa 11886915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 16044262 - 16044300
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  16044262 aatgcaactacaacatcttaatcatgcatgtggtaccaa 16044300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 16049738 - 16049776
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  16049738 aatgcaactacaacatcttaatcatgcatgtggtaccaa 16049776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 16728182 - 16728220
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  16728182 aatgcaactacaacttcttaatcatgcatgtggtaccaa 16728220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 18700870 - 18700832
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  18700870 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 18700832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 35353413 - 35353451
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35353413 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 35353451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 43890180 - 43890142
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  43890180 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 43890142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 44269452 - 44269490
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  44269452 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 44269490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 45531779 - 45531741
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  45531779 aatgcaactacaacttcttaatcatgcatgtggtaccaa 45531741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 17669089 - 17669133
Alignment:
Q  174 cgacttcaactcgacaatgcaacttagacatcttacacatcttga 218  Q
    |||| ||||||||||||||||||||| ||||||||  ||||||||    
T  17669089 cgacatcaactcgacaatgcaacttaaacatcttaatcatcttga 17669133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 46387340 - 46387196
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46387340 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 46387241  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  46387240 agacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 46387196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 61719 - 61576
Alignment:
Q  127 acttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatcta 226  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  61719 actttattaacgacacatggataaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttaaacatcttacacatcttgaaccatcta 61620  T
Q  227 gataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  61619 gacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 61576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 8852467 - 8852322
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  8852467 gcacttaattaacgacacatgggtaaataacaacttaacaacaacgacacaatttcaaatcgacaatgcaacttagacatcttacacatcttgaaccatc 8852368  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  8852367 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 8852322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 18075785 - 18075641
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18075785 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacaacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 18075686  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
      | ||||||||||||| |||| ||||||||||||||||||||||    
T  18075685 caacaaaatgcaactacaaccttttaatcatgcatgtggtaccaa 18075641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 38479796 - 38479918
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||||||||||||||||||||| | |||||||||   ||||||||||||||| |||||  ||||||  ||||||| |  ||||||||||||||||||    
T  38479796 taaataacaacttaacaacaacgacgcaacttcaacttatcaatgcaacttagacttcttattcatcttagaccatctcgtcaaaatgcaactacgacct 38479895  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||||||||||||||||    
T  38479896 cttaatcatgcatgtggtaccaa 38479918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 19487132 - 19487009
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga-taaaatgcaactacgacc 246  Q
    |||||||||||||||  |||||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||||||| ||  ||||||||||||| |||    
T  19487132 taaataacaacttaatcacaacgacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccatcttgacaaaaatgcaactacaacc 19487033  T
Q  247 tcttaatcatgcatgtggtaccaa 270  Q
    ||||| ||||||||||||||||||    
T  19487032 tcttagtcatgcatgtggtaccaa 19487009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 17064496 - 17064443
Alignment:
Q  168 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaacc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17064496 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaacc 17064443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 1543635 - 1543534
Alignment:
Q  170 gacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtacc 268  Q
    ||||| |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||||    
T  1543635 gacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccctcttgacaaaaatgcaactacaacctcttaatcatgcatgtggtacc 1543536  T
Q  269 aa 270  Q
    ||    
T  1543535 aa 1543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 4070615 - 4070653
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  4070615 aatgcaactacaacatcttaatcatgcatgtggtaccaa 4070653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 14220248 - 14220210
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  14220248 aatgcaactacaacttcttaatcatgcatgtggtaccaa 14220210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 16461501 - 16461463
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16461501 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 16461463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 16579331 - 16579369
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16579331 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 16579369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 16586331 - 16586293
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16586331 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 16586293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 33000851 - 33000889
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  33000851 aatgcaactacaacttcttaatcatgcatgtggtaccaa 33000889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 47094021 - 47094059
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  47094021 aatgcaactacaacttcttaatcatgcatgtggtaccaa 47094059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 1868327 - 1868290
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  1868327 atgcaacttagacctcttaatcatgcatgtggtaccaa 1868290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 20220521 - 20220484
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  20220521 atgcaacttagacctcttaatcatgcatgtggtaccaa 20220484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 2633 - 2778
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2633 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 2732  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  2733 tagacaaaatgcaactacgacctcttaatcatgcatgtggaaccaa 2778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 24712971 - 24713116
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24712971 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgatccatc 24713070  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  24713071 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 24713116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 33587292 - 33587148
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33587292 cacttcattaacgacgcatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 33587193  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  33587192 agacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 33587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 125 - 266
Target Start/End: Complemental strand, 39937312 - 39937171
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39937312 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgtaacttagacatcttacacatcttgaaccatc 39937213  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggta 266  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  39937212 tagacaaaatgcaactacgacctcttaatcatgcatatggta 39937171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 18760182 - 18760325
Alignment:
Q  127 acttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatcta 226  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18760182 acttcattaaggacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctc 18760281  T
Q  227 gataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    || ||||||||||||||||| ||||||||||||||| |||||||    
T  18760282 gacaaaatgcaactacgaccccttaatcatgcatgtagtaccaa 18760325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 23944429 - 23944284
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaa-tgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  23944429 cacttcattaacgacacatgggtaaataacaaattaacaacaacggcacgacttcaactcgacaaatgcaacttaaacatcttacacatcttgaaccatc 23944330  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  23944329 tagacaaaatgcaactacaacctcttaatcatgcatgtggtaccaa 23944284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 19801888 - 19801780
Alignment:
Q  161 aacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacctcttaatcatgcat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  19801888 aacaacaacgacacgacttcaactcgacaatgcaacttagacatcttatacctcttgaaccatctagacaaaatgcgactacgacctcttaatcatgcat 19801789  T
Q  261 gtggtacca 269  Q
    |||||||||    
T  19801788 gtggtacca 19801780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 5760271 - 5760309
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  5760271 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 5760309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 17908091 - 17908053
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  17908091 aatgcaactacaacatcttaatcatgcatgtggtaccaa 17908053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 22207072 - 22207110
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  22207072 aatgcaactacaacttcttaatcatgcatgtggtaccaa 22207110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 22244294 - 22244332
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  22244294 aatgcaactacaacttcttaatcatgcatgtggtaccaa 22244332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 23888615 - 23888653
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  23888615 aatgcaactacaacatcttaatcatgcatgtggtaccaa 23888653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 17439876 - 17439839
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  17439876 atgcaacttagacctcttaatcatgcatgtggtaccaa 17439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 24435803 - 24435948
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24435803 gcacttcattaacgacacatgggcaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 24435902  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  24435903 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 24435948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 22252921 - 22252777
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22252921 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 22252822  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
     |||  ||||||||||||||||||||||||||||||||| ||||||    
T  22252821 caga-caaatgcaactacgacctcttaatcatgcatgtgctaccaa 22252777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 23969945 - 23969800
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  23969945 cacttcattaacgacacatgggtgaataacaacttaacaacaacgacacgacttcaacttgacaatgcaacttagacatcttacgcatcttgaaccatct 23969846  T
Q  226 aga-taaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||  |||||||||||||||||||||||||||||||||||||||||    
T  23969845 agacaaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 23969800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 6575989 - 6576132
Alignment:
Q  127 acttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatcta 226  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  6575989 acttcattaacgacacatgggtaaatatcaacttaatgacaacgacacgacttcaactcaacaatgcaacttagacatcttacacatcttgaatcatcta 6576088  T
Q  227 gataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  6576089 gacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 6576132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 19202507 - 19202361
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  19202507 gcacttcattaacgacacatggatgaataacaacttaacaacaacgacacgacttcaactcggcaatgcaacttagacatcttacacatcttgaaccata 19202408  T
Q  225 taga-taaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||    
T  19202407 tagacaaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 19202361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 24866039 - 24865917
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||| ||||||||||||||||||| |||||||||   ||||||||||||||| |||||  ||||||  ||||||| | ||||||||||||||||| |    
T  24866039 taaataaaaacttaacaacaacgacacaacttcaacttatcaatgcaacttagacttcttattcatcttagaccatctcgttaaaatgcaactacgacat 24865940  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||||||||||||||||    
T  24865939 cttaatcatgcatgtggtaccaa 24865917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 7672726 - 7672608
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    |||||||||||||||||||||||| || |||||||||   ||||||||||||||| |||||  ||||||  ||||||| |  |||||||||||||||| |    
T  7672726 taaataacaacttaacaacaacgatacaacttcaacttatcaatgcaacttagacttcttattcatcttagaccatctcgtcaaaatgcaactacgacat 7672627  T
Q  248 cttaatcatgcatgtggta 266  Q
    |||||||||||||||||||    
T  7672626 cttaatcatgcatgtggta 7672608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 20913237 - 20913172
Alignment:
Q  201 acatcttacacatcttgaaccatctagataaaatgcaactacgacctcttaatcatgcatgtggta 266  Q
    ||||||||  ||||||  ||||||| || |||||||||||||||||||||||||||| ||||||||    
T  20913237 acatcttattcatcttagaccatctcgacaaaatgcaactacgacctcttaatcatgtatgtggta 20913172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 5985022 - 5985060
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  5985022 aatgcaactacaacttcttaatcatgcatgtggtaccaa 5985060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 10897824 - 10897786
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  10897824 aatgcaactacaacttcttaatcatgcatgtggtaccaa 10897786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 14693118 - 14693156
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  14693118 aatgcaactacaacttcttaatcatgcatgtggtaccaa 14693156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 20520524 - 20520487
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  20520524 atgcaacttagacctcttaatcatgcatgtggtaccaa 20520487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 23791024 - 23791061
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  23791024 atgcaacttagacctcttaatcatgcatgtggtaccaa 23791061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 32215372 - 32215340
Alignment:
Q  176 acttcaactcgacaatgcaacttagacatctta 208  Q
    ||||||||||||| |||||||||||||||||||    
T  32215372 acttcaactcgactatgcaacttagacatctta 32215340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 1846 - 1702
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1846 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 1747  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||    
T  1746 agacaaaatgcaactacgacttcttaatcatgcatgtggtaccaa 1702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 270
Target Start/End: Original strand, 11424691 - 11424835
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11424691 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 11424790  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||    
T  11424791 agacaaaatgcaactacgacctcttaatcatgcatgcggtaccaa 11424835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 53631852 - 53631708
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53631852 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 53631753  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||    
T  53631752 agacaaaatgcaactacgacatcttaatcatgcatgtggtaccaa 53631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 128 - 269
Target Start/End: Complemental strand, 21816133 - 21815992
Alignment:
Q  128 cttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctag 227  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21816133 cttcattaacgacacgtgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttatacatcttgaaccatctag 21816034  T
Q  228 ataaaatgcaactacgacctcttaatcatgcatgtggtacca 269  Q
    | ||||||| ||||||||||||||||||||||||||||||||    
T  21816033 acaaaatgcgactacgacctcttaatcatgcatgtggtacca 21815992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 6190161 - 6190269
Alignment:
Q  161 aacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacctcttaatcatgcat 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  6190161 aacaacaacgacacgacttcaactcgacaatgcaacttagacatcttatacctcttgaaccatctagacaaaatgcgactacgacctcttaatcatgcat 6190260  T
Q  261 gtggtacca 269  Q
    |||||||||    
T  6190261 gtggtacca 6190269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 129 - 270
Target Start/End: Original strand, 19609035 - 19609176
Alignment:
Q  129 ttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga 228  Q
    ||||||||| || || || ||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||||  ||||||  |||||||  |    
T  19609035 ttcattaacaactcaaggttaaataacaacttaacaacaacgacacaacttcaacttaacaatgcaacttagacttcttattcatcttagaccatctcaa 19609134  T
Q  229 taaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  19609135 caaaatgcaactacgacctcttaatcatgcatgtggtaccaa 19609176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 33185767 - 33185889
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||||||| || ||||||||||||||||||    
T  33185767 taaataaaaacttaacaacaacgacacaacttcaacttaacaatgcaacttagacttcttattcatcttagaccatctcgacaaaatgcaactacgacct 33185866  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
     ||||| ||||||||||||||||    
T  33185867 tttaataatgcatgtggtaccaa 33185889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 22353478 - 22353601
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacc 246  Q
    |||||||||||||||  |||||||||| |||||||||  |||||||| ||||||| |||||  ||||||  ||||||| || |||| ||||||||| |||    
T  22353478 taaataacaacttaatcacaacgacacaacttcaacttaacaatgcatcttagacctcttattcatcttagaccatcttgacaaaaatgcaactacaacc 22353577  T
Q  247 tcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||||||||||||||||    
T  22353578 tcttaatcatgcatgtggtaccaa 22353601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 19561697 - 19561641
Alignment:
Q  167 aacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccat 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19561697 aacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccat 19561641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 15869320 - 15869218
Alignment:
Q  168 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacctcttaatcatgcatgtggtac 267  Q
    ||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || ||||||||||||| ||||||||||||||||||||||||    
T  15869320 acgacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccctcttgaaaaaatgcaactacaacctcttaatcatgcatgtggtac 15869221  T
Q  268 caa 270  Q
    |||    
T  15869220 caa 15869218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 32850895 - 32850990
Alignment:
Q  176 acttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  32850895 acttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgtggtaccaa 32850990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 3484879 - 3484917
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  3484879 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 3484917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 15042324 - 15042286
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  15042324 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 15042286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 15112100 - 15112138
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  15112100 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 15112138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 19734230 - 19734268
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  19734230 aatgcaactacaacttcttaatcatgcatgtggtaccaa 19734268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 21061417 - 21061455
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  21061417 aatgcaactacaacttcttaatcatgcatgtggtaccaa 21061455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 35812633 - 35812595
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35812633 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 35812595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 42874641 - 42874679
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  42874641 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 42874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 53082523 - 53082486
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  53082523 atgcaacttagacctcttaatcatgcatgtggtaccaa 53082486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 14548554 - 14548590
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtacc 268  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  14548554 aatgcaacttcgacttcttaatcatgcatgtggtacc 14548590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 16997371 - 16997407
Alignment:
Q  234 tgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  16997371 tgcaacttcgacttcttaatcatgcatgtggtaccaa 16997407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 5e-71; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 31733500 - 31733643
Alignment:
Q  127 acttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatcta 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31733500 acttcattaacgacacatgggtaaataacaacttaacaacaacgacactacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatcta 31733599  T
Q  227 gataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  31733600 gacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 31733643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 17319371 - 17319227
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17319371 cacttcattaacgacacatgggtaaataacaatttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgatccatct 17319272  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  17319271 agacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 17319227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 125 - 264
Target Start/End: Original strand, 18708206 - 18708345
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18708206 gcacttcattaatgacacatggataaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcatacacatcttgaaccatc 18708305  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtgg 264  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18708306 tagacaaaatgcaactacgacctcttaatcatgcatgtgg 18708345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 27573575 - 27573446
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27573575 gcacttcattaacgacacatgggtaattaacaacttaacaacaacgacacgacttcaactcgacaatgaaacttagacatcttacacatcttgaaccatc 27573476  T
Q  225 tagataaaatgcaactacgacctcttaatc 254  Q
    |||| |||||||||||||||||||||||||    
T  27573475 tagacaaaatgcaactacgacctcttaatc 27573446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 18822348 - 18822208
Alignment:
Q  129 ttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga 228  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | || ||||||||||||||||    
T  18822348 ttcattaacgacacgtgggtaattaacaacttaacaacaacgacacgacttcaactcgacaatgcaagttagacatctcatacctcttgaaccatctaga 18822249  T
Q  229 taaaatgcaactacgacctcttaatcatgcatgtggtacca 269  Q
      |||||| ||||| ||||||||||||||||||||||||||    
T  18822248 cgaaatgcgactactacctcttaatcatgcatgtggtacca 18822208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 18319406 - 18319528
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||| |||||||||||||||| || |||||||||  ||||| || ||||||| |||||  ||||||  ||||||| || ||||||||||||||||||    
T  18319406 taaataataacttaacaacaacgatacaacttcaacttaacaatacatcttagacttcttattcatcttagaccatctcgacaaaatgcaactacgacct 18319505  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||| ||||||||||||    
T  18319506 cttaatcatgaatgtggtaccaa 18319528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 20411939 - 20411900
Alignment:
Q  231 aaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  20411939 aaatgcaacttcaacctcttaatcatgcatgtggtaccaa 20411900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 17105406 - 17105444
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  17105406 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 17105444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 18452969 - 18453007
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  18452969 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 18453007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 22805506 - 22805544
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  22805506 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 22805544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 8e-70; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 48300613 - 48300758
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  48300613 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccgtc 48300712  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||    
T  48300713 tagacaaaatgcaaccacgacctcttaatcatgcatgtggtaccaa 48300758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 35088225 - 35088370
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||    
T  35088225 gcacttctttaacgacacatgagtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttcattaatc 35088324  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  35088325 tagacaaaatgcaactacgacctcttaatcatgcatgtggtaccaa 35088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 51274811 - 51274689
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||||||||||||||||||||||| |||||||||   ||||||||||||||| |||||  ||||||  ||||||| |  ||||||||||||||||||    
T  51274811 taaataacaacttaacaacaacgacacaacttcaacttatcaatgcaacttagacttcttattcatcttagaccatctcgtcaaaatgcaactacgacct 51274712  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||||||||||||||||    
T  51274711 cttaatcatgcatgtggtaccaa 51274689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 1642376 - 1642414
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  1642376 aatgcaactacaacttcttaatcatgcatgtggtaccaa 1642414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 19675595 - 19675633
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  19675595 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 19675633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 20241671 - 20241709
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  20241671 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 20241709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 42911893 - 42911931
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  42911893 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 42911931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 26064689 - 26064726
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  26064689 atgcaacttagacctcttaatcatgcatgtggtaccaa 26064726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 50622315 - 50622278
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  50622315 atgcaacttagacctcttaatcatgcatgtggtaccaa 50622278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 51475909 - 51475946
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||| || ||||||||||||||||||||||||    
T  51475909 atgcaactacaacttcttaatcatgcatgtggtaccaa 51475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 50614487 - 50614451
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtacca 269  Q
    ||||||||  |||||||||||||||||||||||||||    
T  50614487 atgcaacttagacctcttaatcatgcatgtggtacca 50614451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 19920465 - 19920610
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19920465 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacaacttacacatcttgaaccatc 19920564  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||||    
T  19920565 tagacaaaatgctactacgacctcttaatcatgcatgtagtaccaa 19920610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 126 - 270
Target Start/End: Complemental strand, 13536655 - 13536511
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13536655 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcatacacatcttgaaccatct 13536556  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| ||||||||||||| || ||||||||||||||||||||||||    
T  13536555 agacaaaatgcaactaccacatcttaatcatgcatgtggtaccaa 13536511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 125 - 262
Target Start/End: Complemental strand, 21309268 - 21309131
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21309268 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 21309169  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgt 262  Q
    |||| |||||||||||| |||||||||||||| |||||    
T  21309168 tagacaaaatgcaactatgacctcttaatcatacatgt 21309131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 18418203 - 18418322
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    |||||||||||||| |||||||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| |  ||||||||| ||||||||    
T  18418203 taaataacaacttatcaacaacgacacaacttcaacttaacaatgcaacttagacttcttattcatcttagaccctcttgtcaaaatgcaattacgacct 18418302  T
Q  248 cttaatcatgcatgtggtac 267  Q
    ||||||||||||||||||||    
T  18418303 cttaatcatgcatgtggtac 18418322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 40725499 - 40725622
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga-taaaatgcaactacgacc 246  Q
    |||||||||||||||  |||||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||||||| ||  ||||||||||||| |||    
T  40725499 taaataacaacttaatcacaacgacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccatcttgacaaaaatgcaactacaacc 40725598  T
Q  247 tcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||||||||||||||||    
T  40725599 tcttaatcatgcatgtggtaccaa 40725622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 20470286 - 20470249
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||| || ||||||||||||||||||||||||    
T  20470286 atgcaactacaacatcttaatcatgcatgtggtaccaa 20470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 22178591 - 22178554
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  22178591 atgcaacttagacctcttaatcatgcatgtggtaccaa 22178554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 126 - 270
Target Start/End: Original strand, 76460 - 76604
Alignment:
Q  126 cacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatct 225  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  76460 cactttattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttatacatcttgaaccatct 76559  T
Q  226 agataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||    
T  76560 agacaaaatgcaactacgacctcttaatcatgaatgtggtaccaa 76604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 128 - 269
Target Start/End: Complemental strand, 52338 - 52197
Alignment:
Q  128 cttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctag 227  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52338 cttcattaacgacacgtgagtaaataacaacttaacaacgacgacacgacttcaactcgacaatgcaacttagacatcttatacatcttgaaccatctag 52239  T
Q  228 ataaaatgcaactacgacctcttaatcatgcatgtggtacca 269  Q
    | ||||||| ||||||||||||||||||||||||||||||||    
T  52238 acaaaatgcgactacgacctcttaatcatgcatgtggtacca 52197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 116672 - 116710
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  116672 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 116710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 128 - 269
Target Start/End: Original strand, 11629 - 11770
Alignment:
Q  128 cttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctag 227  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||||||||    
T  11629 cttcattaacgacacgtgggtaaataacaacttaacaacaacgacacgacttctactcgacaatgcaacttagacatcttgtacctcttgaaccatctag 11728  T
Q  228 ataaaatgcaactacgacctcttaatcatgcatgtggtacca 269  Q
    | ||||||| ||||||||||||||||||||||||||||||||    
T  11729 acaaaatgcgactacgacctcttaatcatgcatgtggtacca 11770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 139 - 270
Target Start/End: Original strand, 57563 - 57695
Alignment:
Q  139 acacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc-tagataaaatgca 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  57563 acacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatcttagacaaaatgca 57662  T
Q  238 actacgacctcttaatcatgcatgtggtaccaa 270  Q
    | || ||||||||||||||||||||||||||||    
T  57663 aatatgacctcttaatcatgcatgtggtaccaa 57695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 140 - 270
Target Start/End: Original strand, 77851 - 77981
Alignment:
Q  140 cacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaac 239  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  77851 cacatgggtgaataaaaacttaacaacaacgacacgacttcaactcgacagtacaactcagacatcttacacatcttgaaccatctagacaaaatgcaac 77950  T
Q  240 tacgacctcttaatcatgcatgtggtaccaa 270  Q
     ||||| |||||||||||||||| |||||||    
T  77951 cacgacttcttaatcatgcatgtagtaccaa 77981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 20925 - 20785
Alignment:
Q  129 ttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga 228  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||    
T  20925 ttcattaatgacacgtgggtaattaacaacttaaccacaacgacacgacttcaactcgacaatgcaacatagacatctcatacctcttgaaccatctaga 20826  T
Q  229 taaaatgcaactacgacctcttaatcatgcatgtggtacca 269  Q
      |||||| |||||||||||| ||||||||||||| |||||    
T  20825 cgaaatgcgactacgacctctaaatcatgcatgtgatacca 20785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 79760 - 79642
Alignment:
Q  151 ataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacctctt 250  Q
    |||||||| |||||  || ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||| |||||||||||||    
T  79760 ataacaacataacattaatgacacgacttcaactcgacaatgcaacttagacatcttatacctcttgaaccatctagacaaaatgcgactacgacctctt 79661  T
Q  251 aatcatgcatgtggtacca 269  Q
    |||||||||| ||||||||    
T  79660 aatcatgcatttggtacca 79642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 13941 - 14086
Alignment:
Q  125 gcacttcattaacgacacatgggtaaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatc 224  Q
    ||||||| |||||||||||||| ||||||||||| | ||||||||||||| |||||||||  ||||| ||||||| || |||||  ||||||  ||||||    
T  13941 gcacttcgttaacgacacatggataaataacaacgtgacaacaacgacacaacttcaacttaacaatacaacttaaacttcttattcatcttagaccatc 14040  T
Q  225 tagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    | || ||||||||||||||| |||||||||||||||||||||||||    
T  14041 tcgacaaaatgcaactacgatctcttaatcatgcatgtggtaccaa 14086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 23993 - 23871
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    |||||||||||||||||| ||||| || |||||||||| ||||| || ||||||| |||||  |||| |  ||||||| || ||||||||||||||||||    
T  23993 taaataacaacttaacaataacgatacaacttcaactcaacaatacatcttagacttcttattcatcatagaccatctcgacaaaatgcaactacgacct 23894  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||||||||||||||||    
T  23893 cttaatcatgcatgtggtaccaa 23871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 21063 - 20941
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||| |||||||||||||||| || |||||||||  ||||| || ||||||| |||||  ||||||  ||||||| || ||||||||||||||||||    
T  21063 taaataataacttaacaacaacgatacaacttcaacttaacaatacatcttagacttcttattcatcttagaccatctcgacaaaatgcaactacgacct 20964  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||| ||||||||||||    
T  20963 cttaatcatgaatgtggtaccaa 20941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 1172 - 1294
Alignment:
Q  148 taaataacaacttaacaacaacgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaatgcaactacgacct 247  Q
    ||||||||||||||||||||||||||| |||||||||   ||||||||||||||| |||||  ||||||  ||||||  |  | |||||||||||||| |    
T  1172 taaataacaacttaacaacaacgacacaacttcaacttatcaatgcaacttagacttcttattcatcttagaccatcacgtcacaatgcaactacgacat 1271  T
Q  248 cttaatcatgcatgtggtaccaa 270  Q
    |||||||||||||||||||||||    
T  1272 cttaatcatgcatgtggtaccaa 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 7144 - 7209
Alignment:
Q  205 cttacacatcttgaaccatctagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  7144 cttagacatcttaaaccatctagacaaaatgcaactacggcctcttaatcatgcatgtggtaccaa 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 14263 - 14328
Alignment:
Q  205 cttacacatcttgaaccatctagataaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  14263 cttagacatcttaaaccatctagacaaaatgcaactacggcctcttaatcatgcatgtggtaccaa 14328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 34655 - 34758
Alignment:
Q  168 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggta 266  Q
    ||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||    
T  34655 acgacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgtggta 34754  T
Q  267 ccaa 270  Q
    ||||    
T  34755 ccaa 34758  T

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Target: scaffold0235 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 13076 - 13171
Alignment:
Q  176 acttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  13076 acttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgtggtaccaa 13171  T

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Target: scaffold0235; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 24778 - 24873
Alignment:
Q  176 acttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||||||    
T  24778 acttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgtggtaccaa 24873  T

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Target: scaffold0192 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 9594 - 9697
Alignment:
Q  168 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggta 266  Q
    ||||||| |||||||||  |||||||| ||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||||||||    
T  9594 acgacacaacttcaacttaacaatgcagcttagacctcttattcatcttagaccctcttgaaaaaaatgcaactacaacctcttaatcatgcatgtggta 9693  T
Q  267 ccaa 270  Q
    ||||    
T  9694 ccaa 9697  T

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Target: scaffold0075 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 8907 - 8804
Alignment:
Q  168 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctaga-taaaatgcaactacgacctcttaatcatgcatgtggta 266  Q
    ||||||| |||||||||  |||||||||||||||| |||||  | ||||  ||| ||| ||  |||||||||||||||| ||||||||||||||||||||    
T  8907 acgacacaacttcaacttaacaatgcaacttagacctcttattcttcttagaccctcttgacaaaaatgcaactacgacatcttaatcatgcatgtggta 8808  T
Q  267 ccaa 270  Q
    ||||    
T  8807 ccaa 8804  T

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Target: scaffold0029 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 74357 - 74460
Alignment:
Q  168 acgacacgacttcaactcgacaatgcaacttagacatcttacacatcttgaaccatctagataaaa-tgcaactacgacctcttaatcatgcatgtggta 266  Q
    ||||||| |||||||||  |||||||||||||||| |||||  ||||||  ||| ||| || |||| ||||||||| |||||||||||||||||| ||||    
T  74357 acgacacaacttcaacttaacaatgcaacttagacctcttattcatcttagaccttcttgacaaaaatgcaactacaacctcttaatcatgcatgcggta 74456  T
Q  267 ccaa 270  Q
    ||||    
T  74457 ccaa 74460  T

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Target: scaffold0601 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 8038 - 8000
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  8038 aatgcaacttcgacctcttaatcatgcatgtggtaccaa 8000  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 95137 - 95186
Alignment:
Q  169 cgacacgacttcaactcgacaatgcaacttagacatcttacacatcttga 218  Q
    |||||||||||||||| ||||||||||||| |||||||||  ||||||||    
T  95137 cgacacgacttcaacttgacaatgcaacttcgacatcttaatcatcttga 95186  T

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Target: scaffold1633 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 109 - 149
Alignment:
Q  230 aaaatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  109 aaaatgcaacttcgacttcttaatcatgcatgtggtaccaa 149  T

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Target: scaffold1662 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 630 - 592
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  630 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 592  T

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Target: scaffold0546 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 10741 - 10779
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  10741 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 10779  T

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Target: scaffold0486 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 8259 - 8297
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  8259 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 8297  T

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Target: scaffold0452 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 13914 - 13876
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13914 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 13876  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 19805 - 19767
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  19805 aatgcaactacaacttcttaatcatgcatgtggtaccaa 19767  T

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Target: scaffold0301 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 10759 - 10797
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  10759 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 4497 - 4535
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4497 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 7319 - 7357
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  7319 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 7357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 19271 - 19233
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  19271 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 19233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 23986 - 24032
Alignment:
Q  127 acttcattaacgacacatgggtaaataacaacttaacaacaacgaca 173  Q
    ||||||||||| || ||||| || |||||||||||||||||||||||    
T  23986 acttcattaacaactcatggatagataacaacttaacaacaacgaca 24032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 1060 - 1022
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  1060 aatgcaacttcgacttcttaatcatgcatgtggtaccaa 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 7890 - 7928
Alignment:
Q  232 aatgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  7890 aatgcaactacaacttcttaatcatgcatgtggtaccaa 7928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 6598 - 6561
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  6598 atgcaacttagacctcttaatcatgcatgtggtaccaa 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 14052 - 14015
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  14052 atgcaacttagacctcttaatcatgcatgtggtaccaa 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 2427 - 2464
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  2427 atgcaacttagacctcttaatcatgcatgtggtaccaa 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 56095 - 56058
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtaccaa 270  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  56095 atgcaacttagacctcttaatcatgcatgtggtaccaa 56058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Original strand, 1 - 29
Alignment:
Q  242 cgacctcttaatcatgcatgtggtaccaa 270  Q
    |||||||||||||||||||||||||||||    
T  1 cgacctcttaatcatgcatgtggtaccaa 29  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 38182 - 38218
Alignment:
Q  233 atgcaactacgacctcttaatcatgcatgtggtacca 269  Q
    ||||||||  |||||||||||||||||||||||||||    
T  38182 atgcaacttagacctcttaatcatgcatgtggtacca 38218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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