View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6692_low_35 (Length: 244)

Name: NF6692_low_35
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6692_low_35
NF6692_low_35
[»] chr4 (42 HSPs)
chr4 (121-156)||(40755918-40755953)
chr4 (122-156)||(32696828-32696862)
chr4 (123-156)||(1562575-1562608)
chr4 (119-156)||(15522349-15522386)
chr4 (124-156)||(3968885-3968917)
chr4 (119-151)||(4577552-4577584)
chr4 (124-156)||(29407065-29407097)
chr4 (124-156)||(33776852-33776884)
chr4 (119-150)||(9828017-9828048)
chr4 (119-150)||(29863546-29863577)
chr4 (121-156)||(50980599-50980634)
chr4 (120-150)||(10994197-10994227)
chr4 (116-150)||(34259807-34259841)
chr4 (122-156)||(47998592-47998626)
chr4 (122-156)||(53463109-53463143)
chr4 (121-150)||(1987758-1987787)
chr4 (123-156)||(11546941-11546974)
chr4 (123-156)||(12241057-12241090)
chr4 (117-150)||(32621631-32621664)
chr4 (123-156)||(33820375-33820408)
chr4 (117-150)||(37022265-37022298)
chr4 (123-156)||(43358612-43358645)
chr4 (123-156)||(47288081-47288114)
chr4 (121-150)||(51359835-51359864)
chr4 (123-156)||(55595948-55595981)
chr4 (124-156)||(149326-149358)
chr4 (124-156)||(4489837-4489869)
chr4 (124-152)||(8810571-8810599)
chr4 (122-154)||(9472554-9472586)
chr4 (122-150)||(12074196-12074224)
chr4 (122-150)||(13267523-13267551)
chr4 (122-150)||(24088609-24088637)
chr4 (124-156)||(25725733-25725765)
chr4 (122-150)||(29513741-29513769)
chr4 (122-150)||(31318751-31318779)
chr4 (124-156)||(31469028-31469060)
chr4 (124-156)||(35824145-35824177)
chr4 (124-156)||(36812442-36812474)
chr4 (124-156)||(39881069-39881101)
chr4 (118-150)||(46686239-46686271)
chr4 (124-156)||(55996422-55996454)
chr4 (122-150)||(56025254-56025282)
[»] chr3 (29 HSPs)
chr3 (121-156)||(51032663-51032698)
chr3 (123-156)||(11335341-11335374)
chr3 (123-156)||(37894282-37894315)
chr3 (123-156)||(49761225-49761258)
chr3 (109-150)||(49886679-49886720)
chr3 (124-156)||(48944749-48944781)
chr3 (119-150)||(7351683-7351714)
chr3 (117-156)||(34271529-34271568)
chr3 (119-150)||(41448221-41448252)
chr3 (109-156)||(48287656-48287703)
chr3 (120-150)||(36869882-36869912)
chr3 (120-154)||(47742280-47742314)
chr3 (121-150)||(2280174-2280203)
chr3 (119-156)||(29573395-29573432)
chr3 (127-156)||(30251019-30251048)
chr3 (123-156)||(30592336-30592369)
chr3 (123-156)||(40159877-40159910)
chr3 (123-156)||(45186591-45186624)
chr3 (127-156)||(50745372-50745401)
chr3 (117-150)||(55344341-55344374)
chr3 (122-150)||(10347518-10347546)
chr3 (124-156)||(23869006-23869038)
chr3 (124-156)||(31017433-31017465)
chr3 (118-150)||(47141645-47141677)
chr3 (122-150)||(47683799-47683827)
chr3 (124-156)||(48179092-48179124)
chr3 (122-150)||(50652386-50652414)
chr3 (124-156)||(52714733-52714765)
chr3 (124-156)||(52963355-52963387)
[»] chr7 (19 HSPs)
chr7 (118-156)||(33212036-33212074)
chr7 (123-156)||(6822561-6822594)
chr7 (119-150)||(19426575-19426606)
chr7 (123-154)||(48145457-48145488)
chr7 (122-156)||(42584800-42584834)
chr7 (118-156)||(46829473-46829511)
chr7 (123-156)||(9055266-9055299)
chr7 (123-156)||(25940671-25940704)
chr7 (123-156)||(35823014-35823047)
chr7 (123-156)||(39497341-39497374)
chr7 (123-156)||(41590559-41590592)
chr7 (123-156)||(42276090-42276123)
chr7 (121-150)||(42467201-42467230)
chr7 (123-156)||(43213318-43213351)
chr7 (121-150)||(49142551-49142580)
chr7 (122-150)||(11070226-11070254)
chr7 (122-150)||(22692082-22692110)
chr7 (122-150)||(24380755-24380783)
chr7 (124-156)||(34108894-34108926)
[»] chr1 (30 HSPs)
chr1 (122-156)||(12999861-12999895)
chr1 (122-156)||(18541090-18541124)
chr1 (118-156)||(25989023-25989061)
chr1 (119-156)||(29877292-29877329)
chr1 (124-156)||(33076119-33076151)
chr1 (121-156)||(27810286-27810321)
chr1 (120-150)||(26501291-26501321)
chr1 (122-156)||(47386833-47386867)
chr1 (123-156)||(12708089-12708122)
chr1 (123-156)||(12713543-12713576)
chr1 (123-156)||(12717634-12717667)
chr1 (123-156)||(21433440-21433473)
chr1 (123-156)||(30973551-30973584)
chr1 (121-150)||(34157517-34157546)
chr1 (123-152)||(35848411-35848440)
chr1 (121-150)||(43641028-43641057)
chr1 (121-150)||(43757596-43757625)
chr1 (123-156)||(45042260-45042293)
chr1 (117-150)||(50460746-50460779)
chr1 (123-152)||(52233264-52233293)
chr1 (120-156)||(1689387-1689423)
chr1 (124-156)||(3606133-3606165)
chr1 (122-150)||(8577547-8577575)
chr1 (124-156)||(30505375-30505407)
chr1 (122-150)||(39669804-39669832)
chr1 (122-150)||(41564925-41564953)
chr1 (122-150)||(43457864-43457892)
chr1 (124-156)||(47059918-47059950)
chr1 (122-150)||(48634496-48634524)
chr1 (124-156)||(49020443-49020475)
[»] chr8 (31 HSPs)
chr8 (123-156)||(67200-67233)
chr8 (117-150)||(5742702-5742735)
chr8 (119-156)||(25830285-25830322)
chr8 (123-156)||(40719682-40719715)
chr8 (124-156)||(31806299-31806331)
chr8 (120-156)||(42620016-42620052)
chr8 (121-156)||(9048355-9048390)
chr8 (123-154)||(43715874-43715905)
chr8 (119-150)||(45405853-45405884)
chr8 (110-156)||(1332507-1332553)
chr8 (122-156)||(3988903-3988937)
chr8 (118-152)||(22767126-22767160)
chr8 (120-150)||(38675599-38675629)
chr8 (123-152)||(999301-999330)
chr8 (121-154)||(1158376-1158409)
chr8 (123-152)||(1248252-1248281)
chr8 (123-156)||(7376505-7376538)
chr8 (123-152)||(11584095-11584124)
chr8 (121-150)||(23708973-23709002)
chr8 (121-150)||(34578422-34578451)
chr8 (123-156)||(35818936-35818969)
chr8 (123-156)||(41639827-41639860)
chr8 (109-154)||(43286004-43286049)
chr8 (122-150)||(6161946-6161974)
chr8 (124-156)||(10644841-10644873)
chr8 (124-156)||(20473779-20473811)
chr8 (123-151)||(22836183-22836211)
chr8 (124-156)||(35937551-35937583)
chr8 (122-150)||(37784419-37784447)
chr8 (122-150)||(38504168-38504196)
chr8 (124-152)||(42786703-42786731)
[»] chr2 (20 HSPs)
chr2 (123-156)||(6336251-6336284)
chr2 (124-156)||(11980651-11980683)
chr2 (124-156)||(31635849-31635881)
chr2 (121-152)||(14871637-14871668)
chr2 (124-154)||(21738657-21738687)
chr2 (122-156)||(44484695-44484729)
chr2 (123-156)||(1052535-1052568)
chr2 (123-156)||(5031922-5031955)
chr2 (123-156)||(13466114-13466147)
chr2 (123-156)||(14797689-14797722)
chr2 (122-155)||(23045091-23045124)
chr2 (119-148)||(26387906-26387935)
chr2 (121-150)||(36909888-36909917)
chr2 (123-156)||(39737725-39737758)
chr2 (122-150)||(3839408-3839436)
chr2 (124-156)||(6639511-6639543)
chr2 (120-156)||(16754392-16754428)
chr2 (122-150)||(22296163-22296191)
chr2 (120-152)||(23880091-23880123)
chr2 (124-156)||(40874300-40874332)
[»] scaffold0003 (1 HSPs)
scaffold0003 (120-152)||(337114-337146)
[»] chr5 (16 HSPs)
chr5 (124-156)||(22098255-22098287)
chr5 (124-156)||(36416101-36416133)
chr5 (116-150)||(372429-372463)
chr5 (122-156)||(2050925-2050959)
chr5 (120-150)||(8897378-8897408)
chr5 (126-156)||(14321994-14322024)
chr5 (122-156)||(18695316-18695350)
chr5 (122-156)||(19271857-19271891)
chr5 (118-156)||(32873188-32873226)
chr5 (123-156)||(1293125-1293158)
chr5 (123-156)||(6758830-6758863)
chr5 (117-150)||(25585501-25585534)
chr5 (123-152)||(33393633-33393662)
chr5 (122-150)||(6940195-6940223)
chr5 (124-156)||(31708370-31708402)
chr5 (122-150)||(35814451-35814479)
[»] scaffold0014 (1 HSPs)
scaffold0014 (120-150)||(145057-145087)
[»] chr6 (16 HSPs)
chr6 (124-154)||(27102115-27102145)
chr6 (124-154)||(27143937-27143967)
chr6 (118-152)||(32729883-32729917)
chr6 (123-156)||(8778911-8778944)
chr6 (123-156)||(9188983-9189016)
chr6 (123-152)||(15666816-15666845)
chr6 (123-156)||(16328729-16328762)
chr6 (123-156)||(25127872-25127905)
chr6 (123-156)||(26391324-26391357)
chr6 (119-156)||(34490342-34490379)
chr6 (124-156)||(1376364-1376396)
chr6 (124-156)||(1384112-1384144)
chr6 (122-150)||(15364656-15364684)
chr6 (124-156)||(17835612-17835644)
chr6 (122-150)||(28670524-28670552)
chr6 (118-150)||(30714674-30714706)
[»] scaffold0651 (1 HSPs)
scaffold0651 (122-150)||(4891-4919)
[»] scaffold0576 (1 HSPs)
scaffold0576 (122-150)||(9427-9455)
[»] scaffold0184 (1 HSPs)
scaffold0184 (124-156)||(16633-16665)
[»] scaffold0154 (1 HSPs)
scaffold0154 (122-150)||(4313-4341)
[»] scaffold0078 (1 HSPs)
scaffold0078 (124-156)||(56179-56211)
[»] scaffold0049 (1 HSPs)
scaffold0049 (124-156)||(72208-72240)
[»] scaffold0032 (1 HSPs)
scaffold0032 (122-150)||(17434-17462)
[»] scaffold0019 (1 HSPs)
scaffold0019 (122-150)||(72364-72392)
[»] scaffold0009 (1 HSPs)
scaffold0009 (122-150)||(49398-49426)


Alignment Details
Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 40755918 - 40755953
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||||    
T  40755918 atagagaaatgatatttgtacaaccattttctaaca 40755953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 32696862 - 32696828
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||||    
T  32696862 tagagaaatgatatttgtacaaccattttctaaca 32696828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 1562608 - 1562575
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  1562608 agagaaatgatatttgtacaaccattttctaaca 1562575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 15522349 - 15522386
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  15522349 aaatagagaaatgatatatgtacaaccattttctaaca 15522386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 3968885 - 3968917
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  3968885 gagaaatgatatttgtacaaccattttctaaca 3968917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 4577552 - 4577584
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccattttc 151  Q
    |||||||||||||||||||||||||||||||||    
T  4577552 aaatagagaaatgatatttgtacaaccattttc 4577584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 29407097 - 29407065
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  29407097 gagaaatgatatttgtacaaccattttctaaca 29407065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 33776884 - 33776852
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  33776884 gagaaatgatatttgtacaaccattttctaaca 33776852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 9828048 - 9828017
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||    
T  9828048 aaatagagaaatgatatttgtacaaccatttt 9828017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 29863546 - 29863577
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||    
T  29863546 aaatagagaaatgatatttgtacaaccatttt 29863577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 50980599 - 50980634
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| ||||||||||||    
T  50980599 atagagaaatgatatttgtacaatcattttctaaca 50980634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 10994227 - 10994197
Alignment:
Q  120 aatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||||    
T  10994227 aatagagaaatgatatttgtacaaccatttt 10994197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 34259807 - 34259841
Alignment:
Q  116 aataaatagagaaatgatatttgtacaaccatttt 150  Q
    |||| ||||||||||||||||||||||||||||||    
T  34259807 aatatatagagaaatgatatttgtacaaccatttt 34259841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 47998592 - 47998626
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  47998592 tagagaaatgatatttgtacaaccattttgtaaca 47998626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 53463143 - 53463109
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  53463143 tagagaaatgatatttgtacaaccattttataaca 53463109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 1987787 - 1987758
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  1987787 atagagaaatgatatttgtacaaccatttt 1987758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 11546974 - 11546941
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||| ||||||||||||||||||    
T  11546974 agagaaatgatatttttacaaccattttctaaca 11546941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 12241057 - 12241090
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||| |||||||||||    
T  12241057 agagaaatgatatttgtacaactattttctaaca 12241090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 32621631 - 32621664
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||| |||||||||||    
T  32621631 ataaatagagaaatgatatttgcacaaccatttt 32621664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 33820408 - 33820375
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||| |||||||||||    
T  33820408 agagaaatgatatttgtacaactattttctaaca 33820375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 37022265 - 37022298
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||| ||||||||||||||||||||||||||||    
T  37022265 ataaaaagagaaatgatatttgtacaaccatttt 37022298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 43358612 - 43358645
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  43358612 agagaaatgatatttgtacaaccaatttctaaca 43358645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 47288081 - 47288114
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  47288081 agagaaatgatatttgtacaaccattttgtaaca 47288114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 51359864 - 51359835
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  51359864 atagagaaatgatatttgtacaaccatttt 51359835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 55595948 - 55595981
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  55595948 agagaaatgatatttgtacaaccaatttctaaca 55595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 149358 - 149326
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| |||||||||    
T  149358 gagaaatgatatttgtacaaccaatttctaaca 149326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 4489869 - 4489837
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||| |||||||||||||||    
T  4489869 gagaaatgatatttgtataaccattttctaaca 4489837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 152
Target Start/End: Original strand, 8810571 - 8810599
Alignment:
Q  124 gagaaatgatatttgtacaaccattttct 152  Q
    |||||||||||||||||||||||||||||    
T  8810571 gagaaatgatatttgtacaaccattttct 8810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 9472586 - 9472554
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaa 154  Q
    ||||||||||||||||||||||| |||||||||    
T  9472586 tagagaaatgatatttgtacaactattttctaa 9472554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 12074224 - 12074196
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  12074224 tagagaaatgatatttgtacaaccatttt 12074196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 13267551 - 13267523
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  13267551 tagagaaatgatatttgtacaaccatttt 13267523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 24088637 - 24088609
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  24088637 tagagaaatgatatttgtacaaccatttt 24088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 25725765 - 25725733
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| |||||||||    
T  25725765 gagaaatgatatttgtacaaccactttctaaca 25725733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 29513769 - 29513741
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  29513769 tagagaaatgatatttgtacaaccatttt 29513741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 31318751 - 31318779
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  31318751 tagagaaatgatatttgtacaaccatttt 31318779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 31469060 - 31469028
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||| ||||||||||||||||||||    
T  31469060 gagaaatgatatatgtacaaccattttctaaca 31469028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 35824177 - 35824145
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  35824177 gagaaatgatatttgtacaaccattttttaaca 35824145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 36812474 - 36812442
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| |||||||||    
T  36812474 gagaaatgatatttgtacaaccaatttctaaca 36812442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 39881101 - 39881069
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||| ||||||||||||    
T  39881101 gagaaatgatatttgtacaatcattttctaaca 39881069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 46686239 - 46686271
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccatttt 150  Q
    |||| ||||||||||||||||||||||||||||    
T  46686239 taaaaagagaaatgatatttgtacaaccatttt 46686271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 55996422 - 55996454
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||| ||||||||||||    
T  55996422 gagaaatgatatttgtacaatcattttctaaca 55996454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 56025254 - 56025282
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  56025254 tagagaaatgatatttgtacaaccatttt 56025282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 51032698 - 51032663
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||||    
T  51032698 atagagaaatgatatttgtacaaccattttctaaca 51032663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 11335374 - 11335341
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  11335374 agagaaatgatatttgtacaaccattttctaaca 11335341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 37894315 - 37894282
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  37894315 agagaaatgatatttgtacaaccattttctaaca 37894282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 49761258 - 49761225
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  49761258 agagaaatgatatttgtacaaccattttctaaca 49761225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 49886679 - 49886720
Alignment:
Q  109 aaaaacaaataaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  49886679 aaaaaaaaaaaaatagagaaatgatatttgtacaaccatttt 49886720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 48944781 - 48944749
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  48944781 gagaaatgatatttgtacaaccattttctaaca 48944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 7351714 - 7351683
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||    
T  7351714 aaatagagaaatgatatttgtacaaccatttt 7351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 34271568 - 34271529
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  34271568 ataaatagagaaatgatatttgtacaaccactttgtaaca 34271529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 41448252 - 41448221
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||    
T  41448252 aaatagagaaatgatatttgtacaaccatttt 41448221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 48287656 - 48287703
Alignment:
Q  109 aaaaacaaataaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||| ||| || ||||||||||||||||||||||||||||| |||||    
T  48287656 aaaaaaaaaaaattagagaaatgatatttgtacaaccattttataaca 48287703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Complemental strand, 36869912 - 36869882
Alignment:
Q  120 aatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||||    
T  36869912 aatagagaaatgatatttgtacaaccatttt 36869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 47742280 - 47742314
Alignment:
Q  120 aatagagaaatgatatttgtacaaccattttctaa 154  Q
    |||||||||||||||||||||||||||||| ||||    
T  47742280 aatagagaaatgatatttgtacaaccatttcctaa 47742314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Original strand, 2280174 - 2280203
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  2280174 atagagaaatgatatttgtacaaccatttt 2280203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 29573432 - 29573395
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  29573432 aaattgagaaatgatatttgtacaaccattttgtaaca 29573395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 30251048 - 30251019
Alignment:
Q  127 aaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||    
T  30251048 aaatgatatttgtacaaccattttctaaca 30251019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 30592336 - 30592369
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  30592336 agagaaatgatatttgtacaaccattttataaca 30592369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 40159910 - 40159877
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||| |||||||||||    
T  40159910 agagaaatgatatttgtacaactattttctaaca 40159877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 45186624 - 45186591
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||| ||||||||||||||||||||||||||    
T  45186624 agagaaaagatatttgtacaaccattttctaaca 45186591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 50745372 - 50745401
Alignment:
Q  127 aaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||    
T  50745372 aaatgatatttgtacaaccattttctaaca 50745401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 55344374 - 55344341
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||| ||||||||||||||||||||||||||||    
T  55344374 ataaaaagagaaatgatatttgtacaaccatttt 55344341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 10347546 - 10347518
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  10347546 tagagaaatgatatttgtacaaccatttt 10347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 23869038 - 23869006
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  23869038 gagaaatgatatttgtacaaccattttataaca 23869006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 31017465 - 31017433
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||| ||||||||||||    
T  31017465 gagaaatgatatttgtacaatcattttctaaca 31017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 47141677 - 47141645
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||| |||||||||||||||||||||||||||    
T  47141677 taaattgagaaatgatatttgtacaaccatttt 47141645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 47683799 - 47683827
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  47683799 tagagaaatgatatttgtacaaccatttt 47683827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 48179124 - 48179092
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||| |||||||||||    
T  48179124 gagaaatgatatttgtacaactattttctaaca 48179092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 50652386 - 50652414
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  50652386 tagagaaatgatatttgtacaaccatttt 50652414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 52714733 - 52714765
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||| |||||||||||||    
T  52714733 gagaaatgatatttgtacatccattttctaaca 52714765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 52963387 - 52963355
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  52963387 gagaaatgatatttgtacaaccattttttaaca 52963355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 33212036 - 33212074
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  33212036 taaattgagaaatgatatttgtacaaccattttctaaca 33212074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 6822594 - 6822561
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  6822594 agagaaatgatatttgtacaaccattttctaaca 6822561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 150
Target Start/End: Original strand, 19426575 - 19426606
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||    
T  19426575 aaatagagaaatgatatttgtacaaccatttt 19426606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Original strand, 48145457 - 48145488
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaa 154  Q
    ||||||||||||||||||||||||||||||||    
T  48145457 agagaaatgatatttgtacaaccattttctaa 48145488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 42584800 - 42584834
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||| ||||||||||||||||||||    
T  42584800 tagagaaatgatatatgtacaaccattttctaaca 42584834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 46829473 - 46829511
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  46829473 taaaaagagaaatgatatttgtacaaccattttgtaaca 46829511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 9055266 - 9055299
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  9055266 agagaaatgatatttgtacaaccaatttctaaca 9055299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 25940704 - 25940671
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  25940704 agagaaatgatatttgtacaaccattttgtaaca 25940671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 35823047 - 35823014
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||| |||||||||||||    
T  35823047 agagaaatgatatttgtacatccattttctaaca 35823014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 39497374 - 39497341
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  39497374 agagaaatgatatttgtacaaccattttttaaca 39497341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 41590592 - 41590559
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  41590592 agagaaatgatatttgtacaaccattttataaca 41590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 42276090 - 42276123
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||| |||||||||||    
T  42276090 agagaaatgatatttgtacaactattttctaaca 42276123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Original strand, 42467201 - 42467230
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  42467201 atagagaaatgatatttgtacaaccatttt 42467230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 43213318 - 43213351
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  43213318 agagaaatgatatttgtacaaccactttctaaca 43213351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 49142580 - 49142551
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  49142580 atagagaaatgatatttgtacaaccatttt 49142551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 11070226 - 11070254
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  11070226 tagagaaatgatatttgtacaaccatttt 11070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 22692082 - 22692110
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  22692082 tagagaaatgatatttgtacaaccatttt 22692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 24380783 - 24380755
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  24380783 tagagaaatgatatttgtacaaccatttt 24380755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 34108926 - 34108894
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||| ||||||||||||||||||||    
T  34108926 gagaaatgatatatgtacaaccattttctaaca 34108894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 12999895 - 12999861
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||||    
T  12999895 tagagaaatgatatttgtacaaccattttctaaca 12999861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 18541124 - 18541090
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||||    
T  18541124 tagagaaatgatatttgtacaaccattttctaaca 18541090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 25989061 - 25989023
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  25989061 taaatagagaaatgatatttgtacaaccattttttaaca 25989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 29877292 - 29877329
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||| |||||||||||||||||||||||||||||||    
T  29877292 aaatagggaaatgatatttgtacaaccattttctaaca 29877329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 33076119 - 33076151
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  33076119 gagaaatgatatttgtacaaccattttctaaca 33076151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 27810321 - 27810286
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||| |||||||||    
T  27810321 atagagaaatgatatttgtacaaccaatttctaaca 27810286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 26501291 - 26501321
Alignment:
Q  120 aatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||||    
T  26501291 aatagagaaatgatatttgtacaaccatttt 26501321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 47386867 - 47386833
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  47386867 tagagaaatgatatttgtacaaccattttataaca 47386833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 12708089 - 12708122
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||| |||||||||||||||    
T  12708089 agagaaatgatatttgtagaaccattttctaaca 12708122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 12713543 - 12713576
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||| |||||||||||||||    
T  12713543 agagaaatgatatttgtagaaccattttctaaca 12713576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 12717634 - 12717667
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||| |||||||||||||||    
T  12717634 agagaaatgatatttgtagaaccattttctaaca 12717667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 21433473 - 21433440
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  21433473 agagaaatgatatttgtacaaccattttgtaaca 21433440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 30973551 - 30973584
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| ||||||||||    
T  30973551 agagaaatgatatttgtacaacccttttctaaca 30973584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Original strand, 34157517 - 34157546
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  34157517 atagagaaatgatatttgtacaaccatttt 34157546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 35848411 - 35848440
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  35848411 agagaaatgatatttgtacaaccattttct 35848440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 43641057 - 43641028
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  43641057 atagagaaatgatatttgtacaaccatttt 43641028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Original strand, 43757596 - 43757625
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  43757596 atagagaaatgatatttgtacaaccatttt 43757625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 45042260 - 45042293
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||| |||||||||||    
T  45042260 agagaaatgatatttgtacaactattttctaaca 45042293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 50460779 - 50460746
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||| ||||||||||||||||||||||||||    
T  50460779 ataaataaagaaatgatatttgtacaaccatttt 50460746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 52233293 - 52233264
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  52233293 agagaaatgatatttgtacaaccattttct 52233264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 1689387 - 1689423
Alignment:
Q  120 aatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  1689387 aatagagaaatgatatttgtacaactattttataaca 1689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 3606165 - 3606133
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| |||||||||    
T  3606165 gagaaatgatatttgtacaaccaatttctaaca 3606133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 8577575 - 8577547
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  8577575 tagagaaatgatatttgtacaaccatttt 8577547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 30505407 - 30505375
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| |||||||||    
T  30505407 gagaaatgatatttgtacaaccaatttctaaca 30505375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 39669804 - 39669832
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  39669804 tagagaaatgatatttgtacaaccatttt 39669832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 41564953 - 41564925
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  41564953 tagagaaatgatatttgtacaaccatttt 41564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 43457892 - 43457864
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  43457892 tagagaaatgatatttgtacaaccatttt 43457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 47059950 - 47059918
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  47059950 gagaaatgatatttgtacaaccattttttaaca 47059918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 48634524 - 48634496
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  48634524 tagagaaatgatatttgtacaaccatttt 48634496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 49020475 - 49020443
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  49020475 gagaaatgatatttgtacaaccattttttaaca 49020443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 67233 - 67200
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  67233 agagaaatgatatttgtacaaccattttctaaca 67200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 5742735 - 5742702
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||||    
T  5742735 ataaatagagaaatgatatttgtacaaccatttt 5742702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 25830322 - 25830285
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||| |||||||||||||||||||||||||||||||||    
T  25830322 aaattgagaaatgatatttgtacaaccattttctaaca 25830285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 40719715 - 40719682
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  40719715 agagaaatgatatttgtacaaccattttctaaca 40719682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 31806299 - 31806331
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  31806299 gagaaatgatatttgtacaaccattttctaaca 31806331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 42620052 - 42620016
Alignment:
Q  120 aatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||| |||||||||||||    
T  42620052 aatagagaaatgatatttgtacatccattttctaaca 42620016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 9048390 - 9048355
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||| |||||||||||||||    
T  9048390 atagagaaatgatatttgtataaccattttctaaca 9048355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 154
Target Start/End: Original strand, 43715874 - 43715905
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaa 154  Q
    ||||||||||||||||||||||||||||||||    
T  43715874 agagaaatgatatttgtacaaccattttctaa 43715905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 150
Target Start/End: Complemental strand, 45405884 - 45405853
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||||    
T  45405884 aaatagagaaatgatatttgtacaaccatttt 45405853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 1332553 - 1332507
Alignment:
Q  110 aaaacaaataaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  1332553 aaaataaatgaatagagaaatgataattgtacaaccattttataaca 1332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 3988903 - 3988937
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||| |||||||||    
T  3988903 tagagaaatgatatttgtacaaccactttctaaca 3988937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 22767126 - 22767160
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccattttct 152  Q
    ||||| |||||||||||||||||||||||||||||    
T  22767126 taaattgagaaatgatatttgtacaaccattttct 22767160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 38675599 - 38675629
Alignment:
Q  120 aatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||||    
T  38675599 aatagagaaatgatatttgtacaaccatttt 38675629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 999330 - 999301
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  999330 agagaaatgatatttgtacaaccattttct 999301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 1158409 - 1158376
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttctaa 154  Q
    |||||||||||||||||||||||||| |||||||    
T  1158409 atagagaaatgatatttgtacaaccaatttctaa 1158376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 1248252 - 1248281
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  1248252 agagaaatgatatttgtacaaccattttct 1248281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 7376505 - 7376538
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  7376505 agagaaatgatatttgtacaaccaatttctaaca 7376538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 11584095 - 11584124
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  11584095 agagaaatgatatttgtacaaccattttct 11584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Original strand, 23708973 - 23709002
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  23708973 atagagaaatgatatttgtacaaccatttt 23709002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 34578451 - 34578422
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  34578451 atagagaaatgatatttgtacaaccatttt 34578422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 35818936 - 35818969
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||| |||||||||||||||||    
T  35818936 agagaaatgatatttgcacaaccattttctaaca 35818969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 41639860 - 41639827
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||| |||||||||||||    
T  41639860 agagaaatgatatttgtacatccattttctaaca 41639827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 43286049 - 43286004
Alignment:
Q  109 aaaaacaaataaatagagaaatgatatttgtacaaccattttctaa 154  Q
    ||||| ||| ||| |||||||||||||||| |||||||||||||||    
T  43286049 aaaaaaaaagaaaaagagaaatgatatttggacaaccattttctaa 43286004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 6161946 - 6161974
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  6161946 tagagaaatgatatttgtacaaccatttt 6161974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 10644873 - 10644841
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  10644873 gagaaatgatatttgtacaaccattttgtaaca 10644841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 20473779 - 20473811
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  20473779 gagaaatgatatttgtacaaccattttataaca 20473811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 22836211 - 22836183
Alignment:
Q  123 agagaaatgatatttgtacaaccattttc 151  Q
    |||||||||||||||||||||||||||||    
T  22836211 agagaaatgatatttgtacaaccattttc 22836183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 35937583 - 35937551
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  35937583 gagaaatgatatttgtacaaccattttgtaaca 35937551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 37784447 - 37784419
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  37784447 tagagaaatgatatttgtacaaccatttt 37784419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 38504168 - 38504196
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  38504168 tagagaaatgatatttgtacaaccatttt 38504196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 42786731 - 42786703
Alignment:
Q  124 gagaaatgatatttgtacaaccattttct 152  Q
    |||||||||||||||||||||||||||||    
T  42786731 gagaaatgatatttgtacaaccattttct 42786703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 6336251 - 6336284
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||||||||    
T  6336251 agagaaatgatatttgtacaaccattttctaaca 6336284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 11980651 - 11980683
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  11980651 gagaaatgatatttgtacaaccattttctaaca 11980683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 31635881 - 31635849
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  31635881 gagaaatgatatttgtacaaccattttctaaca 31635849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 152
Target Start/End: Original strand, 14871637 - 14871668
Alignment:
Q  121 atagagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||||    
T  14871637 atagagaaatgatatttgtacaaccattttct 14871668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 154
Target Start/End: Complemental strand, 21738687 - 21738657
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaa 154  Q
    |||||||||||||||||||||||||||||||    
T  21738687 gagaaatgatatttgtacaaccattttctaa 21738657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 44484729 - 44484695
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  44484729 tagagaaatgatatttgtacaaccattttgtaaca 44484695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 1052568 - 1052535
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  1052568 agagaaatgatatttgtacaaccattttttaaca 1052535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 5031922 - 5031955
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  5031922 agagaaatgatatttgtacaaccattttgtaaca 5031955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 13466147 - 13466114
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  13466147 agagaaatgatatttgtacaaccaatttctaaca 13466114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 14797722 - 14797689
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  14797722 agagaaatgatatttgtacaaccaatttctaaca 14797689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 23045091 - 23045124
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaac 155  Q
    ||||||||||||||||||||||| ||||||||||    
T  23045091 tagagaaatgatatttgtacaactattttctaac 23045124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 148
Target Start/End: Complemental strand, 26387935 - 26387906
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccatt 148  Q
    ||||||||||||||||||||||||||||||    
T  26387935 aaatagagaaatgatatttgtacaaccatt 26387906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 36909917 - 36909888
Alignment:
Q  121 atagagaaatgatatttgtacaaccatttt 150  Q
    ||||||||||||||||||||||||||||||    
T  36909917 atagagaaatgatatttgtacaaccatttt 36909888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 39737758 - 39737725
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||| |||||||||    
T  39737758 agagaaatgatatttgtacaaccaatttctaaca 39737725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 3839408 - 3839436
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  3839408 tagagaaatgatatttgtacaaccatttt 3839436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 6639543 - 6639511
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||| |||||||||||||||||||||||||    
T  6639543 gagaaataatatttgtacaaccattttctaaca 6639511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 16754392 - 16754428
Alignment:
Q  120 aatagagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||| |||||| |||||||||||    
T  16754392 aatagagaaatgatatttatacaacaattttctaaca 16754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 22296191 - 22296163
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  22296191 tagagaaatgatatttgtacaaccatttt 22296163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 23880091 - 23880123
Alignment:
Q  120 aatagagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||| |||||    
T  23880091 aatagagaaatgatatttgtacaaccactttct 23880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 40874332 - 40874300
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  40874332 gagaaatgatatttgtacaaccattttttaaca 40874300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 337114 - 337146
Alignment:
Q  120 aatagagaaatgatatttgtacaaccattttct 152  Q
    |||||||||||||||||||||||||||||||||    
T  337114 aatagagaaatgatatttgtacaaccattttct 337146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 22098255 - 22098287
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  22098255 gagaaatgatatttgtacaaccattttctaaca 22098287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 36416133 - 36416101
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||||    
T  36416133 gagaaatgatatttgtacaaccattttctaaca 36416101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 372463 - 372429
Alignment:
Q  116 aataaatagagaaatgatatttgtacaaccatttt 150  Q
    |||||| ||||||||||||||||||||||||||||    
T  372463 aataaaaagagaaatgatatttgtacaaccatttt 372429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 2050925 - 2050959
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  2050925 tagagaaatgatatttgtacaaccattttgtaaca 2050959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 8897378 - 8897408
Alignment:
Q  120 aatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||||    
T  8897378 aatagagaaatgatatttgtacaaccatttt 8897408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 156
Target Start/End: Complemental strand, 14322024 - 14321994
Alignment:
Q  126 gaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||||||    
T  14322024 gaaatgatatttgtacaaccattttctaaca 14321994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 18695316 - 18695350
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  18695316 tagagaaatgatatttgtacaaccattttgtaaca 18695350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 19271857 - 19271891
Alignment:
Q  122 tagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||||| |||||    
T  19271857 tagagaaatgatatttgtacaaccattttgtaaca 19271891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 32873226 - 32873188
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  32873226 taaattgagaaatgatatttgtacaaccaatttctaaca 32873188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 1293158 - 1293125
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  1293158 agagaaatgatatttgtacaaccattttttaaca 1293125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 6758863 - 6758830
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||| ||||||||||||||||||||    
T  6758863 agagaaatgatatatgtacaaccattttctaaca 6758830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 25585534 - 25585501
Alignment:
Q  117 ataaatagagaaatgatatttgtacaaccatttt 150  Q
    |||| |||||||||||||||||||||||||||||    
T  25585534 ataattagagaaatgatatttgtacaaccatttt 25585501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 33393633 - 33393662
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  33393633 agagaaatgatatttgtacaaccattttct 33393662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 6940223 - 6940195
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  6940223 tagagaaatgatatttgtacaaccatttt 6940195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 31708370 - 31708402
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  31708370 gagaaatgatatttgtacaaccattttataaca 31708402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 35814451 - 35814479
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  35814451 tagagaaatgatatttgtacaaccatttt 35814479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 145057 - 145087
Alignment:
Q  120 aatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||||    
T  145057 aatagagaaatgatatttgtacaaccatttt 145087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 154
Target Start/End: Original strand, 27102115 - 27102145
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaa 154  Q
    |||||||||||||||||||||||||||||||    
T  27102115 gagaaatgatatttgtacaaccattttctaa 27102145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 154
Target Start/End: Original strand, 27143937 - 27143967
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaa 154  Q
    |||||||||||||||||||||||||||||||    
T  27143937 gagaaatgatatttgtacaaccattttctaa 27143967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 32729883 - 32729917
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccattttct 152  Q
    |||| ||||||||||||||||||||||||||||||    
T  32729883 taaaaagagaaatgatatttgtacaaccattttct 32729917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 8778944 - 8778911
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  8778944 agagaaatgatatttgtacaaccattttttaaca 8778911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 9189016 - 9188983
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  9189016 agagaaatgatatttgtacaaccattttttaaca 9188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 15666845 - 15666816
Alignment:
Q  123 agagaaatgatatttgtacaaccattttct 152  Q
    ||||||||||||||||||||||||||||||    
T  15666845 agagaaatgatatttgtacaaccattttct 15666816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 16328762 - 16328729
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  16328762 agagaaatgatatttgtacaaccattttataaca 16328729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 25127905 - 25127872
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  25127905 agagaaatgatatttgtacaaccattttgtaaca 25127872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 26391357 - 26391324
Alignment:
Q  123 agagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||||||||| |||||    
T  26391357 agagaaatgatatttgtacaaccattttttaaca 26391324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 34490342 - 34490379
Alignment:
Q  119 aaatagagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  34490342 aaatagataaatgatatttgtacaaccattttttaaca 34490379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 1376364 - 1376396
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||| |||||||||||||||||||||||||    
T  1376364 gagaaattatatttgtacaaccattttctaaca 1376396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 1384112 - 1384144
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||| |||||||||||||||||||||||||    
T  1384112 gagaaattatatttgtacaaccattttctaaca 1384144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 15364656 - 15364684
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  15364656 tagagaaatgatatttgtacaaccatttt 15364684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 17835612 - 17835644
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    |||||||||||||||||||||| ||||||||||    
T  17835612 gagaaatgatatttgtacaacccttttctaaca 17835644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 28670524 - 28670552
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  28670524 tagagaaatgatatttgtacaaccatttt 28670552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 30714674 - 30714706
Alignment:
Q  118 taaatagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||| ||||||    
T  30714674 taaatagagaaatgatatttgtacaatcatttt 30714706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 4919 - 4891
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  4919 tagagaaatgatatttgtacaaccatttt 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 9427 - 9455
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  9427 tagagaaatgatatttgtacaaccatttt 9455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 16665 - 16633
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  16665 gagaaatgatatttgtacaaccattttgtaaca 16633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 4313 - 4341
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  4313 tagagaaatgatatttgtacaaccatttt 4341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 56179 - 56211
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  56179 gagaaatgatatttgtacaaccattttgtaaca 56211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 72240 - 72208
Alignment:
Q  124 gagaaatgatatttgtacaaccattttctaaca 156  Q
    ||||||||||||||||||||||||||| |||||    
T  72240 gagaaatgatatttgtacaaccattttgtaaca 72208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 17434 - 17462
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  17434 tagagaaatgatatttgtacaaccatttt 17462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 72364 - 72392
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  72364 tagagaaatgatatttgtacaaccatttt 72392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Complemental strand, 49426 - 49398
Alignment:
Q  122 tagagaaatgatatttgtacaaccatttt 150  Q
    |||||||||||||||||||||||||||||    
T  49426 tagagaaatgatatttgtacaaccatttt 49398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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