View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6692_low_8 (Length: 482)
Name: NF6692_low_8
Description: NF6692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6692_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 461; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 13288018 - 13287550
Alignment:
| Q |
1 |
aaacctcctgtcctattattaccatttttagtacctattttttgcatgatgtgttaaccacatctagctttattcaattagacaatgaaagcgaaaagaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13288018 |
aaacctcctgtcctattattaccatttttagtacctattttttgcatgatgtgttaaccacatctagctttattcaattagacaatgaaagcgaaaagaa |
13287919 |
T |
|
| Q |
101 |
gtaggagatatatagatagattatagaggtggcaaaggaaatgggcctcaacaaacccaactggaccataaatacatatggacccacaaaccctatccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13287918 |
gtaggagatatatagatagattatagaggtggcaaaggaaatgggcctcaacaaacccaactggaccataaatacatatggacccacaaaccctatccat |
13287819 |
T |
|
| Q |
201 |
ttgaaaaatgtctattttgacaataattttggattagaacaaaaacaatatagcaatttccaccaatgaaatcaaatccattaatcttcatatacataat |
300 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13287818 |
ttgaaaaatgtctagtttgacaataattttggattagaacaaaaacaatatagcaatttccaccaatgaaatcaaatccattaatcttcatatacataat |
13287719 |
T |
|
| Q |
301 |
aatatcatggctacttgactagctgatttatatccacctcagcaacggttcataaaattgctgctcaaaaagaacaaaattaagtgcaaacagtagcatg |
400 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13287718 |
aataccatggctacttgactagctgatttatatccacctcagcaacggttcataaaattgctgctcaaaaagaacaaaattaagtgcaaacagtagcatg |
13287619 |
T |
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| Q |
401 |
gtatatgcatggtgcttgtatagttgatgattgatatcaagtatatacattcttatccaatcaaagtga |
469 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13287618 |
gtatatgcatggtgcttgtatagttgatgattgatatcaagtatatacattcttatccaatcaaagtga |
13287550 |
T |
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