View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6694_low_13 (Length: 299)

Name: NF6694_low_13
Description: NF6694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6694_low_13
NF6694_low_13
[»] chr1 (24 HSPs)
chr1 (135-291)||(23927974-23928130)
chr1 (139-291)||(14783303-14783455)
chr1 (14-94)||(1899576-1899656)
chr1 (14-94)||(2833885-2833965)
chr1 (14-94)||(14294052-14294132)
chr1 (14-86)||(23037293-23037365)
chr1 (14-94)||(22428108-22428188)
chr1 (14-94)||(1577078-1577158)
chr1 (14-94)||(38281592-38281672)
chr1 (14-85)||(2266324-2266395)
chr1 (14-135)||(25449357-25449470)
chr1 (16-84)||(29215039-29215107)
chr1 (14-94)||(30892294-30892374)
chr1 (14-94)||(36133440-36133520)
chr1 (14-134)||(22465582-22465696)
chr1 (11-137)||(22202648-22202767)
chr1 (14-76)||(14264198-14264261)
chr1 (35-94)||(20959821-20959880)
chr1 (95-132)||(25398671-25398708)
chr1 (95-136)||(42283838-42283879)
chr1 (14-94)||(7309020-7309099)
chr1 (93-136)||(19171206-19171250)
chr1 (98-134)||(23053577-23053613)
chr1 (108-136)||(43283475-43283503)
[»] chr8 (28 HSPs)
chr8 (135-291)||(17705698-17705854)
chr8 (14-134)||(45539331-45539445)
chr8 (14-94)||(23264474-23264554)
chr8 (14-94)||(30422277-30422357)
chr8 (14-91)||(16206458-16206535)
chr8 (14-94)||(17796641-17796721)
chr8 (15-94)||(18121980-18122059)
chr8 (14-75)||(31445345-31445406)
chr8 (14-94)||(23185593-23185673)
chr8 (14-76)||(9319814-9319876)
chr8 (14-94)||(15336934-15337013)
chr8 (14-94)||(15425999-15426078)
chr8 (14-94)||(15517303-15517382)
chr8 (14-94)||(25163295-25163375)
chr8 (11-94)||(17007534-17007617)
chr8 (14-135)||(22672967-22673080)
chr8 (95-134)||(27739070-27739109)
chr8 (93-134)||(9767971-9768012)
chr8 (14-91)||(19942463-19942539)
chr8 (14-94)||(21932099-21932180)
chr8 (11-94)||(12758586-12758669)
chr8 (11-94)||(17541333-17541416)
chr8 (11-94)||(19153248-19153331)
chr8 (14-63)||(17442694-17442743)
chr8 (95-135)||(40846325-40846366)
chr8 (93-138)||(18157665-18157712)
chr8 (95-136)||(19957258-19957301)
chr8 (10-66)||(29692564-29692620)
[»] chr4 (26 HSPs)
chr4 (137-291)||(36470881-36471035)
chr4 (14-134)||(23749715-23749833)
chr4 (14-135)||(22676362-22676476)
chr4 (14-136)||(24628699-24628816)
chr4 (14-94)||(3792560-3792640)
chr4 (14-94)||(14905127-14905207)
chr4 (14-94)||(29120595-29120675)
chr4 (14-94)||(54679088-54679168)
chr4 (14-135)||(44397402-44397516)
chr4 (14-84)||(17246847-17246917)
chr4 (14-94)||(56033755-56033835)
chr4 (14-94)||(19883920-19884000)
chr4 (16-94)||(12599982-12600060)
chr4 (14-134)||(10071693-10071811)
chr4 (14-94)||(13576950-13577030)
chr4 (14-136)||(14605707-14605825)
chr4 (14-74)||(55379559-55379619)
chr4 (14-73)||(55731078-55731137)
chr4 (14-84)||(37436332-37436402)
chr4 (14-134)||(10072079-10072197)
chr4 (95-136)||(14115998-14116039)
chr4 (95-134)||(22089478-22089517)
chr4 (10-92)||(29681315-29681397)
chr4 (93-136)||(11514457-11514501)
chr4 (93-136)||(19570438-19570482)
chr4 (93-134)||(20649630-20649673)
[»] chr3 (48 HSPs)
chr3 (137-291)||(23646517-23646672)
chr3 (14-94)||(1241921-1242001)
chr3 (14-94)||(14968600-14968680)
chr3 (14-94)||(40799121-40799201)
chr3 (14-94)||(14954641-14954721)
chr3 (14-94)||(20628308-20628388)
chr3 (14-94)||(29952283-29952363)
chr3 (14-94)||(30001437-30001517)
chr3 (14-135)||(50299430-50299549)
chr3 (14-136)||(12727082-12727198)
chr3 (14-94)||(6089959-6090039)
chr3 (14-94)||(18122494-18122574)
chr3 (14-94)||(38178491-38178571)
chr3 (14-94)||(49554356-49554436)
chr3 (14-94)||(52283026-52283106)
chr3 (14-135)||(11189190-11189304)
chr3 (14-76)||(47206912-47206974)
chr3 (14-134)||(14393841-14393956)
chr3 (11-134)||(15902393-15902509)
chr3 (17-94)||(31302580-31302657)
chr3 (14-135)||(11222741-11222859)
chr3 (14-69)||(11222052-11222107)
chr3 (15-94)||(41494234-41494312)
chr3 (11-91)||(19889782-19889862)
chr3 (14-85)||(19885924-19885995)
chr3 (14-84)||(22804867-22804937)
chr3 (14-76)||(47406263-47406325)
chr3 (14-134)||(52919622-52919735)
chr3 (93-134)||(14006879-14006920)
chr3 (14-75)||(33582469-33582530)
chr3 (14-74)||(2782737-2782797)
chr3 (14-74)||(2783127-2783187)
chr3 (95-135)||(11073623-11073663)
chr3 (14-66)||(53057571-53057623)
chr3 (11-94)||(13939127-13939210)
chr3 (14-61)||(24776358-24776405)
chr3 (11-94)||(49643607-49643690)
chr3 (95-136)||(7833636-7833677)
chr3 (95-136)||(7833719-7833760)
chr3 (93-134)||(22128299-22128340)
chr3 (75-134)||(2025293-2025352)
chr3 (14-94)||(8874971-8875051)
chr3 (95-135)||(11067441-11067481)
chr3 (93-136)||(14310875-14310919)
chr3 (14-94)||(16031734-16031814)
chr3 (95-135)||(16305963-16306003)
chr3 (98-134)||(16881444-16881480)
chr3 (14-94)||(17239775-17239855)
[»] chr2 (25 HSPs)
chr2 (14-134)||(45087788-45087902)
chr2 (14-94)||(24851463-24851543)
chr2 (14-135)||(28702015-28702130)
chr2 (14-134)||(39038431-39038545)
chr2 (18-94)||(13964778-13964854)
chr2 (14-94)||(25188631-25188711)
chr2 (14-134)||(21537978-21538092)
chr2 (14-134)||(22188898-22189013)
chr2 (16-76)||(6574957-6575017)
chr2 (14-91)||(28712497-28712574)
chr2 (14-94)||(6391895-6391975)
chr2 (95-135)||(7687307-7687347)
chr2 (14-94)||(31801676-31801756)
chr2 (14-94)||(40780538-40780618)
chr2 (14-93)||(23234183-23234262)
chr2 (11-94)||(24575261-24575344)
chr2 (14-74)||(10010541-10010601)
chr2 (95-135)||(21549185-21549225)
chr2 (14-94)||(24778560-24778640)
chr2 (11-94)||(20569537-20569620)
chr2 (95-134)||(28790137-28790176)
chr2 (14-76)||(22801721-22801783)
chr2 (95-132)||(31968640-31968677)
chr2 (14-94)||(31328765-31328844)
chr2 (14-94)||(31335486-31335565)
[»] chr6 (26 HSPs)
chr6 (14-94)||(10631366-10631446)
chr6 (14-134)||(21234350-21234465)
chr6 (14-94)||(13435114-13435194)
chr6 (14-94)||(17380792-17380872)
chr6 (14-94)||(21624321-21624401)
chr6 (14-94)||(20113473-20113554)
chr6 (14-94)||(15532470-15532550)
chr6 (14-94)||(32543492-32543572)
chr6 (14-134)||(22801339-22801452)
chr6 (14-134)||(9717020-9717135)
chr6 (16-94)||(24717659-24717739)
chr6 (14-94)||(14101284-14101364)
chr6 (10-94)||(15301447-15301531)
chr6 (14-94)||(20731546-20731626)
chr6 (14-94)||(16528544-16528624)
chr6 (14-94)||(18377656-18377736)
chr6 (11-92)||(13601398-13601479)
chr6 (15-94)||(19085361-19085440)
chr6 (14-134)||(19833829-19833942)
chr6 (95-134)||(23602420-23602459)
chr6 (14-91)||(16876141-16876217)
chr6 (93-134)||(33353158-33353199)
chr6 (93-136)||(12352930-12352974)
chr6 (14-74)||(19687982-19688042)
chr6 (93-136)||(21034234-21034278)
chr6 (14-93)||(24116047-24116127)
[»] chr5 (25 HSPs)
chr5 (14-94)||(7746524-7746604)
chr5 (14-134)||(33021845-33021968)
chr5 (14-94)||(6498543-6498623)
chr5 (14-136)||(37395360-37395476)
chr5 (14-94)||(13546355-13546435)
chr5 (14-94)||(13736934-13737014)
chr5 (14-94)||(33932496-33932576)
chr5 (14-134)||(30742135-30742248)
chr5 (14-92)||(31117106-31117184)
chr5 (14-76)||(42242854-42242916)
chr5 (13-94)||(9399440-9399521)
chr5 (14-91)||(21076011-21076088)
chr5 (14-94)||(11993118-11993197)
chr5 (14-94)||(21100578-21100658)
chr5 (14-94)||(23413804-23413884)
chr5 (14-66)||(23880269-23880321)
chr5 (95-138)||(26120721-26120764)
chr5 (14-94)||(22000855-22000935)
chr5 (14-94)||(31487437-31487517)
chr5 (11-94)||(6513255-6513338)
chr5 (14-137)||(90261-90378)
chr5 (95-136)||(39799714-39799755)
chr5 (14-94)||(12353691-12353771)
chr5 (95-143)||(28465248-28465296)
chr5 (93-134)||(35544010-35544053)
[»] scaffold0859 (1 HSPs)
scaffold0859 (14-134)||(2166-2280)
[»] chr7 (45 HSPs)
chr7 (14-135)||(13879331-13879452)
chr7 (14-94)||(4493773-4493853)
chr7 (14-94)||(14186915-14186995)
chr7 (14-94)||(15467144-15467224)
chr7 (14-94)||(16546186-16546266)
chr7 (14-94)||(16619396-16619476)
chr7 (14-94)||(21284223-21284303)
chr7 (14-94)||(28623202-28623282)
chr7 (17-94)||(48237687-48237764)
chr7 (14-94)||(13027800-13027880)
chr7 (14-94)||(19328859-19328939)
chr7 (14-94)||(21691653-21691733)
chr7 (14-134)||(13473336-13473448)
chr7 (24-94)||(16557469-16557539)
chr7 (24-94)||(16608123-16608193)
chr7 (16-94)||(35954762-35954840)
chr7 (14-134)||(2499223-2499337)
chr7 (14-134)||(11792065-11792179)
chr7 (14-134)||(13259292-13259406)
chr7 (14-84)||(13034702-13034772)
chr7 (14-94)||(9710683-9710763)
chr7 (14-136)||(33604097-33604213)
chr7 (14-94)||(22580103-22580183)
chr7 (26-94)||(30025163-30025231)
chr7 (14-94)||(41843271-41843351)
chr7 (11-94)||(13731522-13731605)
chr7 (11-94)||(16315383-16315466)
chr7 (14-137)||(33692571-33692689)
chr7 (93-134)||(8932954-8932995)
chr7 (14-132)||(13261524-13261636)
chr7 (14-94)||(23280824-23280905)
chr7 (14-94)||(12175183-12175263)
chr7 (14-94)||(12367606-12367686)
chr7 (14-94)||(29936194-29936274)
chr7 (20-134)||(1292247-1292355)
chr7 (95-134)||(8182153-8182192)
chr7 (95-134)||(9761886-9761925)
chr7 (16-136)||(10884021-10884135)
chr7 (11-94)||(13645680-13645763)
chr7 (93-135)||(4412889-4412931)
chr7 (95-133)||(9802280-9802318)
chr7 (16-94)||(13302090-13302168)
chr7 (14-75)||(15087800-15087862)
chr7 (14-91)||(5001711-5001788)
chr7 (14-86)||(16317445-16317517)
[»] scaffold0479 (1 HSPs)
scaffold0479 (14-94)||(9197-9277)
[»] scaffold0439 (1 HSPs)
scaffold0439 (14-94)||(7509-7588)
[»] scaffold0210 (1 HSPs)
scaffold0210 (14-94)||(852-932)
[»] scaffold0163 (2 HSPs)
scaffold0163 (14-94)||(25659-25739)
scaffold0163 (93-135)||(28853-28897)
[»] scaffold0036 (1 HSPs)
scaffold0036 (14-94)||(111400-111480)
[»] scaffold0115 (1 HSPs)
scaffold0115 (14-94)||(17560-17642)
[»] scaffold0315 (1 HSPs)
scaffold0315 (18-94)||(7900-7976)
[»] scaffold0205 (1 HSPs)
scaffold0205 (14-94)||(752-832)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-85)||(102795-102866)
[»] scaffold0161 (2 HSPs)
scaffold0161 (14-94)||(10907-10988)
scaffold0161 (14-94)||(15571-15652)
[»] scaffold0009 (2 HSPs)
scaffold0009 (14-94)||(83591-83672)
scaffold0009 (43-94)||(83527-83579)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-94)||(158377-158457)
[»] scaffold0007 (1 HSPs)
scaffold0007 (14-74)||(59902-59962)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-136)||(211553-211671)
[»] scaffold0004 (4 HSPs)
scaffold0004 (14-135)||(210602-210715)
scaffold0004 (11-94)||(378348-378431)
scaffold0004 (95-139)||(219431-219476)
scaffold0004 (95-134)||(245126-245166)
[»] scaffold0530 (1 HSPs)
scaffold0530 (16-94)||(2816-2894)
[»] scaffold0026 (1 HSPs)
scaffold0026 (11-85)||(7119-7193)
[»] scaffold0525 (1 HSPs)
scaffold0525 (93-134)||(7054-7095)
[»] scaffold0330 (1 HSPs)
scaffold0330 (35-84)||(492-541)
[»] scaffold0028 (1 HSPs)
scaffold0028 (14-91)||(24576-24652)
[»] scaffold0567 (1 HSPs)
scaffold0567 (14-86)||(9137-9209)
[»] scaffold0290 (1 HSPs)
scaffold0290 (14-94)||(19454-19534)
[»] scaffold0043 (2 HSPs)
scaffold0043 (95-134)||(2627-2666)
scaffold0043 (14-62)||(79159-79207)
[»] scaffold1747 (1 HSPs)
scaffold1747 (94-135)||(516-559)
[»] scaffold1745 (1 HSPs)
scaffold1745 (94-135)||(852-895)
[»] scaffold0607 (1 HSPs)
scaffold0607 (26-94)||(5364-5431)
[»] scaffold0570 (1 HSPs)
scaffold0570 (93-134)||(320-363)
[»] scaffold0146 (1 HSPs)
scaffold0146 (14-94)||(14345-14425)


Alignment Details
Target: chr1 (Bit Score: 133; Significance: 4e-69; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 23927974 - 23928130
Alignment:
Q  135 aacacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcaca 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  23927974 aacacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacctgtacagaagcgctgccccttgattcaagcaaacatgcaca 23928073  T
Q  235 tagtgacaagtctgccttcacctatcattttgctcttgagaatgttcctgatgatgt 291  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||    
T  23928074 tagtgacaagtctgccttcacctatcatttggctcttgagaatattcctaatgatgt 23928130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 139 - 291
Target Start/End: Original strand, 14783303 - 14783455
Alignment:
Q  139 cgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcacatagt 238  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||| |||||||| ||| || ||||||||| | |||||| ||||||    
T  14783303 cgtctcccccacggttgttgcccccgttgacacatacgttgcacaatcataaacttgtccagaagcgttgccccatgattcaagcatacatgcgcatagt 14783402  T
Q  239 gacaagtctgccttcacctatcattttgctcttgagaatgttcctgatgatgt 291  Q
    ||||||| ||||||||| |||||||| ||| |||||||||||  |||||||||    
T  14783403 gacaagtatgccttcacttatcatttggctattgagaatgttattgatgatgt 14783455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 1899656 - 1899576
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||    
T  1899656 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaa 1899576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 2833965 - 2833885
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||  ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  2833965 acatcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 2833885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 14294052 - 14294132
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||||    
T  14294052 acatcactttagaagtataactctatctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaa 14294132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 23037293 - 23037365
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagc 86  Q
    ||||||||| |||||||||| ||||||| ||||||| |||||||||||||||| ||||||||| |||||||||    
T  23037293 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttatgataaaaagaagaaaaagc 23037365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 22428108 - 22428188
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||| || |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||| ||||||||    
T  22428108 acatcatttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaa 22428188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 1577158 - 1577078
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||| || || |||||| ||||||| | |||||||    
T  1577158 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaa 1577078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 38281672 - 38281592
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| | |||||  |||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  38281672 acatcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaa 38281592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 2266395 - 2266324
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 85  Q
    ||||||||| |||||||||| |||||||  |||||| ||||||||||||||||||| |||| | ||||||||    
T  2266395 acatcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaaacgaagaaaaag 2266324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 25449357 - 25449470
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| ||||||| || ||||||| ||||||| |||||||||||| |||||| |||||| | ||| |||        |||||||||||| ||||||    
T  25449357 acatcacttcagaagtataactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaaaaaatagc-------caacacaattcaaccccctt 25449448  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||||| ||||||||||||||||    
T  25449449 cttgtgtttttctcaccttcaa 25449470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 29215107 - 29215039
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 84  Q
    ||||||| |||||| ||| ||||||| ||||||| ||||||||||||||||| | |||||| |||||||    
T  29215107 atcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaa 29215039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 30892374 - 30892294
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||| | ||||||| ||||||||||||||||| | |||  | ||||||||| |||||||    
T  30892374 acatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaagctaacacaa 30892294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 36133520 - 36133440
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | ||||| || |||||| |||| ||| |||||||||||||||| || |||||| ||||||||| |||||||    
T  36133520 acatcacttcataagtaaaactctatcgacttatgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaa 36133440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 22465582 - 22465696
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| |||||||||| ||   |||||||||| |||||||||||||||||||  ||| | | ||||||        |||||||||||||  |||||    
T  22465582 acatcacttcagaagtagaactccgcctacttctgatcagtgttttcagcttaggagtaaacgaataaaaag-------taaacacaattcaacccccct 22465674  T
Q  113 tcttgtatttttctcaccttca 134  Q
    ||||||||||||||||||||||    
T  22465675 tcttgtatttttctcaccttca 22465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 22202648 - 22202767
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccc 110  Q
    |||| ||||| | ||||| |||| ||||| | ||| ||| |||||||||||| |||||| |||| | ||||||||       | |||||||||||| |||    
T  22202648 tggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaag-------ataacacaattcaacccc 22202740  T
Q  111 cttcttgtatttttctcaccttcaaac 137  Q
    || ||||| ||||||||||||||||||    
T  22202741 ctccttgtgtttttctcaccttcaaac 22202767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 14264198 - 14264261
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaag 76  Q
    ||||||||| |||||||||| ||||||| ||| ||| ||||||||| |||||||||| ||||||    
T  14264198 acatcacttcagaagtagaattctatctgcttttgatcagtgtttttcagcttaggagaaaaag 14264261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 20959821 - 20959880
Alignment:
Q  35 tctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  20959821 tctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa 20959880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 25398708 - 25398671
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcacctt 132  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  25398708 aacacaattcaacccccttcttgtgtttttctcacctt 25398671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 42283879 - 42283838
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaa 136  Q
    |||||| ||||| ||||||||||| |||||||||||||||||    
T  42283879 aacacacttcaacccccttcttgtgtttttctcaccttcaaa 42283838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 7309099 - 7309020
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||| | ||||||| |||||||||||| |||||| |||| | ||||||| | |||||||    
T  7309099 acatcactttagaagcagaattctatttgcttctgatcagtgttttcag-ttaggagaaaacgaagaaaaaaccaacacaa 7309020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 19171206 - 19171250
Alignment:
Q  93 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  19171206 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 19171250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 23053613 - 23053577
Alignment:
Q  98 acaattcaatccccttcttgtatttttctcaccttca 134  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  23053613 acaattcaacccccttcttgtgtttttctcaccttca 23053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 43283475 - 43283503
Alignment:
Q  108 ccccttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||||||||||||||||||    
T  43283475 ccccttcttgtatttttctcaccttcaaa 43283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 5e-62; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 17705698 - 17705854
Alignment:
Q  135 aacacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcaca 234  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| | |||||| ||    
T  17705698 aacacgtctcccccacggttgttgcccccgttgacacatatgttgcacaatcagaaacctgtccagaagcgctgccccttgattcaagcatacatgcgca 17705797  T
Q  235 tagtgacaagtctgccttcacctatcattttgctcttgagaatgttcctgatgatgt 291  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17705798 tagtgacaagtctgccttcacctatcatttggctcttgagaatgttactgatgatgt 17705854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 45539331 - 45539445
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||       ||||||||||||||  |||||    
T  45539331 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaacccccct 45539423  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  45539424 tcttgtgtttttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 23264474 - 23264554
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  23264474 acatcacttcagaagtagaattctatctacttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaa 23264554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 30422277 - 30422357
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  30422277 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagcaaacacaa 30422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 16206535 - 16206458
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| ||||    
T  16206535 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaaca 16206458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 17796721 - 17796641
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  17796721 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 17796641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 18121980 - 18122059
Alignment:
Q  15 catcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||| |||||||||| ||||||| ||||||| || ||||||||||| |||| |||||| ||||||||| |||||||    
T  18121980 catcacttcagaagtagaactctatctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaa 18122059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 31445406 - 31445345
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaa 75  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||    
T  31445406 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaaaaaaa 31445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 23185593 - 23185673
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||| ||| |||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| ||||||| | |||||||    
T  23185593 acatcgcttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaa 23185673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 9319876 - 9319814
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 76  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||| | ||||||    
T  9319876 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaag 9319814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 15336934 - 15337013
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||||| || |||| ||||| |||||| |||||| |||||| |||||||||||||||||    
T  15336934 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaa 15337013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 15425999 - 15426078
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||||| || |||| ||||| |||||| |||||| |||||| |||||||||||||||||    
T  15425999 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaa 15426078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 15517303 - 15517382
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||||| || |||| ||||| |||||| |||||| |||||| |||||||||||||||||    
T  15517303 acatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaa 15517382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 25163375 - 25163295
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||| | | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  25163375 acatcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 25163295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 17007617 - 17007534
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| |||| | ||| | ||||||| ||||||||||||||||||| |||| | ||||||| |||||||||    
T  17007617 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaacaaacacaa 17007534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 22673080 - 22672967
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||| ||| |||||||||| ||||||| ||||||| | || ||||||| |||||| |||||  ||||||||| |||||||       ||||| ||||||    
T  22673080 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaa-------ttcaaccccctt 22672989  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||||| ||||||||||||||||    
T  22672988 cttgtgtttttctcaccttcaa 22672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 27739109 - 27739070
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  27739109 aacacaattcaacccccttcttgtatttttctcaccttca 27739070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 9767971 - 9768012
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  9767971 aaaacacaattcaacccccttcttgtgtttttctcaccttca 9768012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 19942539 - 19942463
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| |||||||||| ||||||| ||| ||| | ||||||||||||||||| |||| | ||||||||| ||||    
T  19942539 acatcacttcagaagtagaactctatctgctt-tgatcggtgttttcagcttaggagaaaacgaagaaaaagccaaca 19942463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21932180 - 21932099
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| |||| |||||| ||  ||||||| ||||||| ||||||||| |||||||||| |||||| ||||||||| |||||||    
T  21932180 acattacttcagaagtggatctctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaa 21932099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 12758586 - 12758669
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| | || ||||| | ||||||| |||||||||||| |||||| |||| | ||||||||| |||||||    
T  12758586 tggaaatcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaaacgaagaaaaagctaacacaa 12758669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 17541333 - 17541416
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| |||| | ||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  17541333 tggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa 17541416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 19153331 - 19153248
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | |||| |||| |||||||    
T  19153331 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaataagctaacacaa 19153248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 17442694 - 17442743
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagc 63  Q
    ||||||||| |||||||||| ||||| | ||||||| |||||||||||||    
T  17442694 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagc 17442743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 40846325 - 40846366
Alignment:
Q  95 aacacaattcaatcccc-ttcttgtatttttctcaccttcaa 135  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  40846325 aacacaattcaaccccccttcttgtatttttctcaccttcaa 40846366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 18157712 - 18157665
Alignment:
Q  93 aaaacacaattcaatcccc--ttcttgtatttttctcaccttcaaaca 138  Q
    |||||||||||||| ||||  ||||||| |||||||||||||||||||    
T  18157712 aaaacacaattcaacccccccttcttgtgtttttctcaccttcaaaca 18157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 19957258 - 19957301
Alignment:
Q  95 aacacaattcaatc--cccttcttgtatttttctcaccttcaaa 136  Q
    ||||||||||||||  |||||||||| |||||||||||||||||    
T  19957258 aacacaattcaatctccccttcttgtgtttttctcaccttcaaa 19957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 29692620 - 29692564
Alignment:
Q  10 atggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagctta 66  Q
    ||||| ||||||| ||||| |||| ||||| | ||||||| ||||||||||||||||    
T  29692620 atggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagctta 29692564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 36470881 - 36471035
Alignment:
Q  137 cacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaacatgtacagaagcgctgctccttgattcaagaaaacatgcacata 236  Q
    |||||||||||||| ||||||||| | |||||||||||||||||| ||||| |||| |||  |||| |||||| |||||||||||| | |||||| ||||    
T  36470881 cacgtctcccccacagttgttgcccctgttgacacatatgttgcataatcaaaaacctgtctagaaacgctgccccttgattcaagcagacatgcgcata 36470980  T
Q  237 gtgacaagtctgccttcacctatcattttgctcttgagaatgttcctgatgatgt 291  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||    
T  36470981 gtgacaagtctgcctttacctatcatttggctcttgagaatgttaccgatgatgt 36471035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 23749833 - 23749715
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||| | ||||||||| |||||  ||  |||| |  |||||||    
T  23749833 acatcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacac--aattcaatcccctcccctt 23749736  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||||| |||||||||||||||    
T  23749735 cttgtgtttttctcaccttca 23749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 22676362 - 22676476
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| | |||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||||        |||||||||||  ||||||    
T  22676362 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagc-------caacacaattcacccccctt 22676454  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||||| ||||||||||||||||    
T  22676455 cttgtgtttttctcaccttcaa 22676476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 24628699 - 24628816
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcc-cc 111  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||        |||||||||||| ||| ||    
T  24628699 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc-------taacacaattcaactcctcc 24628791  T
Q  112 ttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||||||||||||||    
T  24628792 ttcttgtatttttctcaccttcaaa 24628816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 3792640 - 3792560
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||| | ||||||||||||||||||| |||||| ||||||||| |||||||    
T  3792640 acatcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 3792560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 14905127 - 14905207
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||||| |||||| ||||||||| |||||||    
T  14905127 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaa 14905207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 29120675 - 29120595
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||| ||||| |||||||    
T  29120675 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaa 29120595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 54679168 - 54679088
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||| ||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  54679168 acatcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaa 54679088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 44397516 - 44397402
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| ||||| |||| ||||||| ||||||| |||||||||||||||| || |||||| |||||||||        |||||||||||| ||||||    
T  44397516 acatcacttcagaagcagaactctatctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagc-------caacacaattcaaccccctt 44397424  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||| | ||||||||||||||||    
T  44397423 cttatgtttttctcaccttcaa 44397402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 17246917 - 17246847
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 84  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||    
T  17246917 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 17246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 56033835 - 56033755
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| |||||||  |||||||||||||||||| |||||| ||||||| | |||||||    
T  56033835 acatcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaa 56033755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 19884000 - 19883920
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||||||||| ||| ||||||| |||||||  |||||||| ||||||||| |||||| ||||||| | |||||||    
T  19884000 acatcacttaagaagtggaattctatctgcttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaacacaa 19883920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 12600060 - 12599982
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| |||||||||| | ||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  12600060 atcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 12599982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 10071811 - 10071693
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||| ||| ||||| | ||||| | ||||||||||||||||||| |||||| ||||||||  |||||  ||  ||| ||  |||||||    
T  10071811 acatcacttcagaagtggaactctatttgcttcttatcagtgttttcagcttaggaaaaaaagaagaaaaagataacac--aattcaactccctcccctt 10071714  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||| | |||||||||||||||    
T  10071713 cttatgtttttctcaccttca 10071693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 13576950 - 13577030
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||| ||  ||||||||||||||    
T  13576950 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaa-gaataaaagcaaacacaa 13577030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 14605707 - 14605825
Alignment:
Q  14 acatcacttaagaa-gtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaat--ccc 110  Q
    ||||||||| |||| |||||| | ||||| ||||||| ||||||||||||||||||| |||| | | |||||||        |||||||||||||  |||    
T  14605707 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagc-------taacacaattcaatccccc 14605799  T
Q  111 cttcttgtatttttctcaccttcaaa 136  Q
    |||||||| |||||||||||||||||    
T  14605800 cttcttgtgtttttctcaccttcaaa 14605825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 55379619 - 55379559
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 74  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| ||||    
T  55379619 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaa 55379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 55731137 - 55731078
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaa 73  Q
    ||||||||| |||||||||||||||||||||| | | |||| |||||||||||| |||||    
T  55731137 acatcacttcagaagtagaaatctatctactttttatcagtattttcagcttagcataaa 55731078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 37436332 - 37436402
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 84  Q
    ||||||||| | |||||||| ||||||| ||||||| ||||||||||| | ||||| |||||| |||||||    
T  37436332 acatcacttcataagtagaactctatctgcttctgatcagtgttttcaacataggagaaaaagaagaaaaa 37436402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 10072197 - 10072079
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| ||||||  || ||||  | ||||||| ||||||||||| ||||||| |||||| ||||||||| |||||  ||  |||  |  |||||||    
T  10072197 acatcacttcagaagtgaaactctagttgcttctgatcagtgttttcatcttaggagaaaaagaagaaaaagctaacac--aattcaaccccctcccctt 10072100  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||||| |||||||||||||||    
T  10072099 cttgtgtttttctcaccttca 10072079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 14116039 - 14115998
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  14116039 aacacaattcaacccccttcttgtgtttttctcaccttcaaa 14115998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 22089517 - 22089478
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  22089517 aacacaattcaacccccttcttgtgtttttctcaccttca 22089478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 29681315 - 29681397
Alignment:
Q  10 atggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacac 92  Q
    ||||| ||||||| ||||| || | ||||| | ||| ||| ||||||||||||||||||| |||| | ||||||||| |||||    
T  29681315 atggaaatcacttcagaagcagtactctatttgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacac 29681397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 11514501 - 11514457
Alignment:
Q  93 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  11514501 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 11514457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 19570482 - 19570438
Alignment:
Q  93 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  19570482 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 19570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 20649630 - 20649673
Alignment:
Q  93 aaaacacaattcaatcccc--ttcttgtatttttctcaccttca 134  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  20649630 aaaacacaattcaatccccccttcttgtgtttttctcaccttca 20649673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 23646517 - 23646672
Alignment:
Q  137 cacgtctcccccacggttgttgccaccgttgacacatatgttgcacaatcagaaa-catgtacagaagcgctgctccttgattcaagaaaacatgcacat 235  Q
    |||||||||||||||||||||||| |||||||| |||| ||||| |||||||||| | | | |||||| | ||| |||| ||||||| | |||||| |||    
T  23646517 cacgtctcccccacggttgttgcccccgttgactcatacgttgcgcaatcagaaaacctatccagaagtgttgccccttaattcaagcagacatgcgcat 23646616  T
Q  236 agtgacaagtctgccttcacctatcattttgctcttgagaatgttcctgatgatgt 291  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| || |||||||    
T  23646617 agtgacaagtctgccttcacctatcatttggatcttgagaatgttactaatgatgt 23646672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 1241921 - 1242001
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||| | |||||||    
T  1241921 acatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaa 1242001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 14968680 - 14968600
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  14968680 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 14968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 40799201 - 40799121
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  40799201 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaa 40799121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 14954721 - 14954641
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| |||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  14954721 acattacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 14954641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20628308 - 20628388
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||||| |||||| ||||||||| |||||||    
T  20628308 acatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaaaagaagaaaaagctaacacaa 20628388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 29952283 - 29952363
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  29952283 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 29952363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 30001437 - 30001517
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  30001437 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 30001517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 50299549 - 50299430
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccc-t 112  Q
    |||||| || |||||||||||||||||| ||||||| ||||||||||| ||||||| |||||| ||||||   |||   |||||||||||||| |||| |    
T  50299549 acatcagttcagaagtagaaatctatctgcttctgatcagtgttttcaacttaggagaaaaagaagaaaagaaaaa---aaaacacaattcaacccccct 50299453  T
Q  113 tcttgtatttttctcaccttcaa 135  Q
    |||| | ||||||||||||||||    
T  50299452 tcttatgtttttctcaccttcaa 50299430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 12727082 - 12727198
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcc-cct 112  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | | |||||||        |||||||||||| || |||    
T  12727082 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagc-------taacacaattcaaccctcct 12727174  T
Q  113 tcttgtatttttctcaccttcaaa 136  Q
    |||||| |||||||||||||||||    
T  12727175 tcttgtgtttttctcaccttcaaa 12727198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 6090039 - 6089959
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| |  |||||||| |||||||    
T  6090039 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaa 6089959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 18122494 - 18122574
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| || |||| ||||||||||||| ||||| |||||||||||||| | |||||||    
T  18122494 acatcacttcagaagtagaactctatctgctcctgatcagtgttttcagcgtaggagaaaaaggagaaaaaactaacacaa 18122574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 38178491 - 38178571
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||||| |||||||  |||||||||||||||||| |||||| ||||||||| |||||||    
T  38178491 acatcacttcagaagaagaactctatctgcttctgattagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 38178571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 49554356 - 49554436
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||||| |||||| ||||||| | |||||||    
T  49554356 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaa 49554436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 52283106 - 52283026
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| | ||||||  |||||||    
T  52283106 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaa 52283026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 11189304 - 11189190
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| | |||||||| ||||||| ||||||| ||||||||||| ||||||| |||||| ||||||| |        ||||||||||||  |||||    
T  11189304 acatcacttcataagtagaactctatcttcttctgatcagtgttttcatcttaggagaaaaagaagaaaaaac-------caacacaattcaacaccctt 11189212  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||||| ||||||||||||||||    
T  11189211 cttgtgtttttctcaccttcaa 11189190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 47206974 - 47206912
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 76  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  47206974 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaag 47206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 14393841 - 14393956
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa--tcccc 111  Q
    ||||||||| |||||||||| ||||| | ||||||| ||||||||||| ||||||| |||| | |||||||||        ||||||||||||   ||||    
T  14393841 acatcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagc-------taacacaattcaacgccccc 14393933  T
Q  112 ttcttgtatttttctcaccttca 134  Q
    |||||||||||||||||||||||    
T  14393934 ttcttgtatttttctcaccttca 14393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 15902509 - 15902393
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccc 110  Q
    |||| ||||||| ||||| |||| | ||| | | ||||| ||||||||||||||||||| |||||| |||||||||        |||||||||||| |||    
T  15902509 tggaaatcacttcagaagcagaactttatttgcctctgatcagtgttttcagcttaggagaaaaagaagaaaaagc-------taacacaattcaacccc 15902417  T
Q  111 cttcttgtatttttctcaccttca 134  Q
    |||||||| |||||||||||||||    
T  15902416 cttcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 31302657 - 31302580
Alignment:
Q  17 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||| |||||| ||||||| | |||||||    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaa 31302580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 11222859 - 11222741
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| || |||  ||| ||  |||  |  |||||||||||| ||||||    
T  11222859 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaa--aaagcc--aacacaattcaaccccctt 11222764  T
Q  114 cttgt-atttttctcaccttcaa 135  Q
    |||||  ||||||||||||||||    
T  11222763 cttgtgttttttctcaccttcaa 11222741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 11222107 - 11222052
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttagga 69  Q
    ||||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||    
T  11222107 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttagga 11222052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 41494312 - 41494234
Alignment:
Q  15 catcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||| |||| ||||| ||||| ||||||||| |||||||||||||||||||  ||||| ||||||||| |||||||    
T  41494312 catcacttcagaaatagaactctatttacttctgatcagtgttttcagcttagga-gaaaagaagaaaaagccaacacaa 41494234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 19889782 - 19889862
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    |||||||||||| ||||| |||| ||||| | ||||| | ||||||||||||||||||| |||| | ||||||||| ||||    
T  19889782 tggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaaca 19889862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 19885924 - 19885995
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 85  Q
    ||||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||| | ||||||||    
T  19885924 acatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaag 19885995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 22804867 - 22804937
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 84  Q
    ||||||||| | |||||||| ||||||| ||||||| ||||||||||| ||||||| |||| | |||||||    
T  22804867 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaa 22804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 47406263 - 47406325
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 76  Q
    ||||||||| | |||||| | ||||||| ||||||| ||||||||||||||||||| ||||||    
T  47406263 acatcacttcacaagtagcactctatctccttctgatcagtgttttcagcttaggagaaaaag 47406325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 52919735 - 52919622
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| | || ||||| ||||||| ||| ||| ||||||||||||||||||| |||| | ||||||| |        |||||||||||  ||||||    
T  52919735 acatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaac-------taacacaattcagccccctt 52919643  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||||| |||||||||||||||    
T  52919642 cttgtgtttttctcaccttca 52919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 14006920 - 14006879
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  14006920 aaaacacaattcaacccccttcttgtgtttttctcaccttca 14006879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 33582530 - 33582469
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaa 75  Q
    ||||||||| |||| ||||||||||||||||||| | ||||||||||| |||| || |||||    
T  33582530 acatcacttcagaattagaaatctatctacttcttatcagtgttttcatcttatgagaaaaa 33582469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2782797 - 2782737
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 74  Q
    ||||||||| |||||||||| |||||||  |||||| |||||||||||||| |||| ||||    
T  2782797 acatcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaa 2782737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2783187 - 2783127
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 74  Q
    ||||||||| |||||||||| |||||||  |||||| |||||||||||||| |||| ||||    
T  2783187 acatcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaa 2783127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 11073663 - 11073623
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaa 135  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  11073663 aacacaattcaacccccttcttgtgtttttctcaccttcaa 11073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 53057571 - 53057623
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagctta 66  Q
    ||||||||| |||||||||| |||||||||||||||  || ||||||||||||    
T  53057571 acatcacttcagaagtagaactctatctacttctgattagagttttcagctta 53057623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 13939210 - 13939127
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| |||| || ||||| |||||||||| | |||||||  |||||||||||||||||| ||||   ||||||||| |||||||    
T  13939210 tggaaatcaatttagaagcagaaatctatttgcttctgattagtgttttcagcttaggagaaaacaaagaaaaagctaacacaa 13939127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 24776358 - 24776405
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttca 61  Q
    ||||||||| |||||||||| ||||||| ||||||| |||||||||||    
T  24776358 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 24776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 49643607 - 49643690
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| | ||| |||| ||||| | ||| ||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  49643607 tggaaatcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 49643690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 7833636 - 7833677
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaa 136  Q
    ||||||||| || ||||||||||| |||||||||||||||||    
T  7833636 aacacaatttaacccccttcttgtgtttttctcaccttcaaa 7833677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 7833719 - 7833760
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaa 136  Q
    ||||||||| || ||||||||||| |||||||||||||||||    
T  7833719 aacacaatttaacccccttcttgtgtttttctcaccttcaaa 7833760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 22128340 - 22128299
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  22128340 aaaacacaattcaacccctttattgtatttttctcaccttca 22128299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 2025352 - 2025293
Alignment:
Q  75 aggagaaaaagcaaacacaaaacacaattcaatcccc-ttcttgtatttttctcaccttca 134  Q
    ||||||||||| ||| | |||||||||||||| |||| ||||||| |||||||||||||||    
T  2025352 aggagaaaaagaaaa-agaaaacacaattcaaccccccttcttgtgtttttctcaccttca 2025293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 8874971 - 8875051
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| | || | ||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  8874971 acatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggaaaaaacgaagaaaaaaccaacacaa 8875051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 11067481 - 11067441
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaa 135  Q
    |||||||||||| | ||||||||| ||||||||||||||||    
T  11067481 aacacaattcaacctccttcttgtgtttttctcaccttcaa 11067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 14310919 - 14310875
Alignment:
Q  93 aaaacacaattcaatc-cccttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||| | |||||||||||||||| |||||||||||    
T  14310919 aaaacacaattcaacctcccttcttgtatttttgtcaccttcaaa 14310875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 16031814 - 16031734
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| |||| |||||| ||| ||||| | ||||||| ||||  ||||||||||||| |||||| |||||||| || |||||    
T  16031814 acattacttcagaagtggaactctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaatcacaa 16031734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 16305963 - 16306003
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaa 135  Q
    |||||||||||| ||| |||||||||||||||||| |||||    
T  16305963 aacacaattcaacccctttcttgtatttttctcacattcaa 16306003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 16881480 - 16881444
Alignment:
Q  98 acaattcaatccccttcttgtatttttctcaccttca 134  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  16881480 acaattcaacccccttcttgtgtttttctcaccttca 16881444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 17239775 - 17239855
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | ||| |||| ||||| | ||| ||| || |||||||||||||||| |||| | ||||||||| |||||||    
T  17239775 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaa 17239855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 45087788 - 45087902
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||| ||||||||       ||||||||||||||  |||||    
T  45087788 acatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaacccccct 45087880  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  45087881 tcttgtgtttttctcaccttca 45087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 24851463 - 24851543
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||||    
T  24851463 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 24851543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 28702015 - 28702130
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||| ||||||||       ||||||||||||||  |||||    
T  28702015 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaacccccct 28702107  T
Q  113 tcttgtatttttctcaccttcaa 135  Q
    |||||| ||||||||||||||||    
T  28702108 tcttgtgtttttctcaccttcaa 28702130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 39038431 - 39038545
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||        |||||||||||| ||||||    
T  39038431 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc-------taacacaattcaactcccct 39038523  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  39038524 tcttgtttttttctcaccttca 39038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13964778 - 13964854
Alignment:
Q  18 cacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||||| ||||||| |||||||||    
T  13964778 cacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaacaaacacaa 13964854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 25188711 - 25188631
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||| ||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  25188711 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 25188631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 21537978 - 21538092
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatc-ccct 112  Q
    ||||||||| |||||||||| ||||||| ||||| | || ||||||||||||| || |||| | |||||||||       |||||||||||||||  |||    
T  21537978 acatcacttcagaagtagaactctatctgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagc-------aaacacaattcaatcttcct 21538070  T
Q  113 tcttgtatttttctcaccttca 134  Q
    ||||||||||||||||||||||    
T  21538071 tcttgtatttttctcaccttca 21538092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 22188898 - 22189013
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccc-- 111  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||| ||||| |||||| ||||||| |        |||||||||||||||||      
T  22188898 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaac-------caacacaattcaatcccccg 22188990  T
Q  112 ttcttgtatttttctcaccttca 134  Q
    ||||||| |||||||||||||||    
T  22188991 ttcttgtgtttttctcaccttca 22189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 6574957 - 6575017
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 76  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||    
T  6574957 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaag 6575017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 28712497 - 28712574
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| ||||||| || ||||||| ||||||| || |||||||||||||||| |||||  |||||||| |||||    
T  28712497 acatcacttcagaagtataactctatctgcttctgatcaatgttttcagcttaggagaaaaataagaaaaagaaaaca 28712574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 6391975 - 6391895
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||| | ||||||| |||||||||||||||| || | |||| ||||||| | |||||||    
T  6391975 acatcacttcagaagtagaactctatatgcttctgatcagtgttttcagcttaagaaagaaagaagaaaaaaccaacacaa 6391895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 7687307 - 7687347
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaa 135  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7687307 aacacaattcaacccccttcttgtatttttctcaccttcaa 7687347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 31801676 - 31801756
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | ||| |||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||| | |||||||    
T  31801676 acatcactttaaaagcagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaaaccaacacaa 31801756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 40780618 - 40780538
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  40780618 acatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa 40780538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 23234262 - 23234183
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacaca 93  Q
    ||||||||| ||||||| || ||||||| ||||||| ||||||||||||| ||||| |||||| | ||||| | ||||||    
T  23234262 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcataggagaaaaagaaaaaaaaaccaacaca 23234183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 24575344 - 24575261
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  24575344 tggaaatcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaagctaacacaa 24575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 10010541 - 10010601
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 74  Q
    ||||||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| ||||    
T  10010541 acatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaa 10010601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 21549185 - 21549225
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaa 135  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  21549185 aacacaattcaatccccttattgtgtttttctcaccttcaa 21549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 24778640 - 24778560
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| | || ||||| | ||||||| |||||||||||||||||||  ||| | ||||||||| |||||||    
T  24778640 acatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagtaaacgaagaaaaagccaacacaa 24778560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 20569537 - 20569620
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||  |||||||    
T  20569537 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaa 20569620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 28790137 - 28790176
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  28790137 aacacaattcaacccccttcttatatttttctcaccttca 28790176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 22801783 - 22801721
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 76  Q
    ||||||||| |||||||||| ||||||| ||| | | ||||||||||||||||| | ||||||    
T  22801783 acatcactttagaagtagaactctatctgcttataatcagtgttttcagcttagaagaaaaag 22801721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 31968640 - 31968677
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcacctt 132  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  31968640 aacacaattcaacccccttcttgtgtttttctcacctt 31968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 31328765 - 31328844
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||| |||||| || | ||||| ||||| | ||||||||||||  ||||| |||||| ||||||| |||||||||    
T  31328765 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcag-ataggagaaaaagaagaaaaaacaaacacaa 31328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 31335486 - 31335565
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||| |||||| || | ||||| ||||| | ||||||||||||  ||||| |||||| ||||||| |||||||||    
T  31335486 acatcacttatgaagtaaaactttatctgcttctaaacagtgttttcag-ataggagaaaaagaagaaaaaacaaacacaa 31335565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 10631446 - 10631366
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  10631446 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaa 10631366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 21234465 - 21234350
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccc-- 111  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||  ||||||||        |||||||||||| ||||      
T  21234465 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaaagaggaaaaagc-------taacacaattcaacccccca 21234373  T
Q  112 ttcttgtatttttctcaccttca 134  Q
    |||||||||||||||||||||||    
T  21234372 ttcttgtatttttctcaccttca 21234350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 13435194 - 13435114
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| ||||   |||||||||||||||||    
T  13435194 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaa 13435114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 17380872 - 17380792
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  17380872 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 17380792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21624401 - 21624321
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  21624401 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 21624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20113473 - 20113554
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgacca-gtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| || ||||||||||||||||| |||| | |||||||||||||||||    
T  20113473 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 20113554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 15532470 - 15532550
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||| | || |||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  15532470 acatcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaa 15532550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 32543572 - 32543492
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||| ||| ||||||| ||||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  32543572 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaaaagaagaaaaagctaacacaa 32543492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 22801452 - 22801339
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||| | ||||||||  |||||  ||||||||| |||||||       ||||| ||||||    
T  22801452 acatcacttcagaagtagaactctatctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaa-------ttcaaccccctt 22801360  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||||| |||||||||||||||    
T  22801359 cttgtgtttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 9717135 - 9717020
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa--tcccc 111  Q
    ||||||||| |||||| ||| ||||||| ||| ||| ||||||||||| ||||||| |||||| |||||| ||       |||||||||||||  |||||    
T  9717135 acatcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgc-------aaacacaattcaacctcccc 9717043  T
Q  112 ttcttgtatttttctcaccttca 134  Q
    ||||||| |||||||||||||||    
T  9717042 ttcttgtgtttttctcaccttca 9717020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 24717659 - 24717739
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaa--ggagaaaaagcaaacacaa 94  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||  | |||||||| ||||||||    
T  24717659 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaaacacaa 24717739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 14101284 - 14101364
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | |||||||| ||||||| ||||||| |||| |||||||||||||| |||| | ||||||||| |||||||    
T  14101284 acatcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa 14101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 15301531 - 15301447
Alignment:
Q  10 atggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||| ||||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  15301531 atggaaatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 15301447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20731546 - 20731626
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| | ||||||  |||||||    
T  20731546 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaaggtaacacaa 20731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 16528624 - 16528544
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||| ||||| ||||||| ||||| | ||||||||||| ||||||| |||| | ||||||||| |||||||    
T  16528624 acatcacttcagaaatagaactctatctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaa 16528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 18377736 - 18377656
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| |||||||  || ||| |||| ||||||||||| || |||||| ||||||||| |||||||    
T  18377736 acatcacttcagaagtagaactctatctgtttttgatcagtattttcagcttatgagaaaaagaagaaaaagccaacacaa 18377656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 13601479 - 13601398
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacac 92  Q
    |||| ||||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| ||||   ||||||||| |||||    
T  13601479 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaactaagaaaaagctaacac 13601398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 19085440 - 19085361
Alignment:
Q  15 catcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||| ||||| |||| ||||| | ||||| | |||||||||||||||| || |||| | ||||||||| |||||||    
T  19085440 catcacttcagaagcagaactctatttgcttcttatcagtgttttcagcttatgagaaaacgaagaaaaagccaacacaa 19085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 19833829 - 19833942
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| ||| || | | ||||||| ||||||| |||||||||||| |||||| ||||||  |||||||       ||||||||||||||  |||||    
T  19833829 acatcacttcagaggtggtactctatctgcttctgatcagtgttttcag-ttaggagaaaaagatgaaaaag-------aaaacacaattcaacccccct 19833920  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  19833921 tcttgtgtttttctcaccttca 19833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 23602459 - 23602420
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  23602459 aacataattcaatccccttcttgtatttttgtcaccttca 23602420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 16876217 - 16876141
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| ||||| |||| |||||||||| |||| |||||||||||| ||| || |||||  ||||||| ||||||    
T  16876217 acatcacttcagaagcagaactctatctactcctgatcagtgttttcag-ttaagagaaaaataagaaaaaacaaaca 16876141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 33353158 - 33353199
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||||| ||||||| ||| |||||||||||||||    
T  33353158 aaaacacaattcaacccccttcctgtgtttttctcaccttca 33353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 12352974 - 12352930
Alignment:
Q  93 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  12352974 aaaacacaattcaaccccccttcttgtgtttttctcaccttcaaa 12352930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 19688042 - 19687982
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 74  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||| | ||||| ||||    
T  19688042 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcaacataggagaaaa 19687982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 21034278 - 21034234
Alignment:
Q  93 aaaacacaattcaatcccc-ttcttgtatttttctcaccttcaaa 136  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  21034278 aaaacacaattcaacccccgttcttgtgtttttctcaccttcaaa 21034234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 24116127 - 24116047
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtg-ttttcagcttaggataaaaaggagaaaaagcaaacaca 93  Q
    |||| |||| ||||| |||| ||||| | ||||||||||||| |||||| ||||||| |||| | ||||||||| ||||||    
T  24116127 acattacttcagaagcagaactctatttgcttctgaccagtgtttttcaacttaggagaaaacgaagaaaaagccaacaca 24116047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 7746524 - 7746604
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | |||||||||||||||||    
T  7746524 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 7746604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 33021968 - 33021845
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa--gcaaacacaaaacacaattcaa-tccc 110  Q
    |||||||||  ||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||    ||| |   ||||||||||||  |||    
T  33021968 acatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaaggagaaaaatgagaaaaagccaacacaattcaaccccc 33021869  T
Q  111 cttcttgtatttttctcaccttca 134  Q
    |||||||| |||||||||||||||    
T  33021868 cttcttgtgtttttctcaccttca 33021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 6498623 - 6498543
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||| | ||||||||||||||||||| |||| | ||||||||| |||||||    
T  6498623 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 6498543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 37395476 - 37395360
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| |||| ||||| ||||||| ||||| | ||||||||||||||||||| || ||| ||||||||        |||||||||||||  |||||    
T  37395476 acatcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaagaagaagaaaaag-------taaacacaattcaacccccct 37395384  T
Q  113 tcttgtatttttctcaccttcaaa 136  Q
    |||||| |||||||||||||||||    
T  37395383 tcttgtgtttttctcaccttcaaa 37395360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 13546355 - 13546435
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||| | |||| | |||||||| ||||||||    
T  13546355 acatcacttcagaagtagaactctatctgcttctgatcattgttttcagcttagaagaaaacgaagaaaaagtaaacacaa 13546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 13736934 - 13737014
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||| ||| |||||||  |||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  13736934 acatcacttcagaagtggaactctatctgtttctgatcagtgttttcagtttaggagaaaaagaagaaaaagctaacacaa 13737014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 33932576 - 33932496
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||| || |||||||||||||||| | ||||||| ||||||||||||||||| | |||||  ||||||||| |||||||    
T  33932576 acatcatttcagaagtagaaatctatttgcttctgatcagtgttttcagcttagaagaaaaaaaagaaaaagccaacacaa 33932496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 30742248 - 30742135
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||||||| | ||||| ||||||| |||||||||||||||   | |||||| ||||||||         |||||||||||| ||||||    
T  30742248 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagctttaaagaaaaagaagaaaaag-------tcaacacaattcaaccccctt 30742156  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||||| |||||||||||||||    
T  30742155 cttgtgtttttctcaccttca 30742135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 31117184 - 31117106
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacac 92  Q
    ||||||||| |||||||||| |||||||  || ||| ||||||||||||||||||| |||| | |||||||| ||||||    
T  31117184 acatcacttcagaagtagaactctatctggttttgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacac 31117106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 42242916 - 42242854
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaag 76  Q
    ||||||||| | |||||||||||||| | ||||||| ||||||||||||||||||| ||||||    
T  42242916 acatcacttcataagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaaag 42242854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 9399440 - 9399521
Alignment:
Q  13 gacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||| |||| ||||| ||||||| |||||||  |||||||||||||||||| |||| | ||||||| | |||||||    
T  9399440 gacatcacttcagaaatagaattctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa 9399521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 21076011 - 21076088
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| |||||||||| || |||| ||||||| ||||||| ||||||||||| |||| | ||||||||| ||||    
T  21076011 acatcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaaacgaagaaaaagctaaca 21076088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 11993197 - 11993118
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||||| || |||| ||||||||| || |||||| |||||| |||||||||||||||||    
T  11993197 acatcacttcagaagcagaactctatctgctcctgatcagtgtttttag-ttaggagaaaaagaagaaaaagcaaacacaa 11993118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21100578 - 21100658
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | |||| ||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  21100578 acatcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa 21100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 23413804 - 23413884
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | ||| |||| ||||| ||||||||  ||||||||||||||||||| |||| | ||||||||| |||||||    
T  23413804 acatcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 23413884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 23880321 - 23880269
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagctta 66  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||    
T  23880321 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagctta 23880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 26120721 - 26120764
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaaca 138  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  26120721 aacacaattcaacccccttcttgtgtttttctcaccttcaaaca 26120764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 22000855 - 22000935
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||| || ||||| | || ||||| | ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  22000855 acatcatttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 22000935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 31487517 - 31487437
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | || ||||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  31487517 acatcacttcaaaattagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaccaacacaa 31487437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 6513255 - 6513338
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| |||| ||||| | ||| ||| |||||||||||||||| || |||| | ||||||||| |||||||    
T  6513255 tggaaatcacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaagagaaaacgaagaaaaagccaacacaa 6513338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 90261 - 90378
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccct 112  Q
    |||||||||  |||| |||| ||||| | ||||||| ||||||||| |||||||||| |||| | |||||||||        |||||||||||| | | |    
T  90261 acatcacttcggaagcagaactctatttgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaagc-------taacacaattcaacctcat 90353  T
Q  113 tcttgtatttttctcaccttcaaac 137  Q
    |||||| ||||||||||||||||||    
T  90354 tcttgtgtttttctcaccttcaaac 90378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 39799714 - 39799755
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaa 136  Q
    ||||||||||||  |||||||||| |||||||||||||||||    
T  39799714 aacacaattcaactcccttcttgtgtttttctcaccttcaaa 39799755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 12353691 - 12353771
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | |||||||| | ||||| ||||||| ||| ||||||||||||||| |||  | ||||||||  |||||||    
T  12353691 acatcacttcataagtagaactttatctgcttctgatcagagttttcagcttaggagaaatcgaagaaaaagttaacacaa 12353771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 28465248 - 28465296
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttcaaacacgtct 143  Q
    |||||||||||| ||||||||||| ||||||| ||||||| || |||||    
T  28465248 aacacaattcaacccccttcttgtgtttttcttaccttcatactcgtct 28465296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 35544010 - 35544053
Alignment:
Q  93 aaaacacaattcaa--tccccttcttgtatttttctcaccttca 134  Q
    ||||||||||||||  |||||||||||| |||||||||||||||    
T  35544010 aaaacacaattcaacctccccttcttgtgtttttctcaccttca 35544053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 2280 - 2166
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatccc-ct 112  Q
    ||||||||| |||||||||| ||||||| ||||||| |||||| |||||||||||| |||||| ||||||||       |||||||||||||| ||| ||    
T  2280 acatcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaag-------aaaacacaattcaaccccact 2188  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  2187 tcttgtgtttttctcaccttca 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 13879452 - 13879331
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||| || || |||||| |||||||||||||||||  ||     |   ||||||    
T  13879452 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaattcaacccccccccccctt 13879353  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||||||||||||||||||||||    
T  13879352 cttgtatttttctcaccttcaa 13879331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 4493853 - 4493773
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  4493853 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 4493773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 14186995 - 14186915
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||| ||||| |||||| |||||||| ||||||||    
T  14186995 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaa 14186915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 15467224 - 15467144
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||    
T  15467224 acatcacttaagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagataacacaa 15467144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 16546186 - 16546266
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  16546186 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 16546266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 16619476 - 16619396
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||    
T  16619476 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa 16619396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21284223 - 21284303
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||| ||||| ||||||| ||||||| ||||||||||||||||||| |||| |||||||||| ||||||||    
T  21284223 acatcacttcagaaatagaactctatctgcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaa 21284303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 28623202 - 28623282
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| |||||| |||||||||||| |||||| ||||||||| |||||||    
T  28623202 acatcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaa 28623282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 48237687 - 48237764
Alignment:
Q  17 tcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||| |||||||||| ||||||||||||||| |||||||||||||||| || |||||| ||||||||  |||||||    
T  48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaagagaaaaagaagaaaaagtcaacacaa 48237764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 13027800 - 13027880
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| || ||||||| |||||||| |||| | |||||||||||||||||    
T  13027800 acatcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaa 13027880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 19328859 - 19328939
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||| ||| ||||||||||||||| ||| |||||| ||||||||| |||||||    
T  19328859 acatcacttcagaagtagaactctatctgcttgtgatcagtgttttcagctttggagaaaaagaagaaaaagccaacacaa 19328939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21691733 - 21691653
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  21691733 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaa 21691653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 13473336 - 13473448
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||| | |||||||        |  ||||||||||| ||||||    
T  13473336 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa--------actacacaattcaagcccctt 13473427  T
Q  114 cttgtatttttctcaccttca 134  Q
    ||||||||||||||| |||||    
T  13473428 cttgtatttttctcatcttca 13473448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 16557469 - 16557539
Alignment:
Q  24 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||||| |||||||    
T  16557469 agaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaa 16557539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 16608193 - 16608123
Alignment:
Q  24 agaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||||| |||||||    
T  16608193 agaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaa 16608123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 35954762 - 35954840
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| ||||||| || ||||||| ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||    
T  35954762 atcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaa 35954840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 2499337 - 2499223
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaat-cccct 112  Q
    |||||| || |||||||||| ||||||| |||||||  |||||||||||||||||| |||| | ||||||||         ||||||||||||| |||||    
T  2499337 acatcatttcagaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaag-------ttaacacaattcaatccccct 2499245  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  2499244 tcttgtgtttttctcaccttca 2499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 11792179 - 11792065
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| ||||||||||  |||||| ||||||| ||||||||||| ||||||| |||| | ||||||||       | ||||||||||||  |||||    
T  11792179 acatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaag-------ataacacaattcaacccccct 11792087  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  11792086 tcttgtgtttttctcaccttca 11792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 13259292 - 13259406
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| ||||| |||| ||||| || |||||| ||||||| ||||||||||| |||| | ||||||||       ||||||||||||||  |||||    
T  13259292 acatcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaag-------aaaacacaattcaacccccct 13259384  T
Q  113 tcttgtatttttctcaccttca 134  Q
    |||||| |||||||||||||||    
T  13259385 tcttgtgtttttctcaccttca 13259406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 13034702 - 13034772
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 84  Q
    ||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||| | |||||||    
T  13034702 acatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 13034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 9710683 - 9710763
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||| |||||||||| ||||| ||  ||||||||||||||    
T  9710683 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaa-gaataaaagcaaacacaa 9710763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 33604213 - 33604097
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||| | ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | |||||||||        ||||||||||||  |||||    
T  33604213 acatcacgtcagaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc-------caacacaattcaacccccct 33604121  T
Q  113 tcttgtatttttctcaccttcaaa 136  Q
    |||||| |||||||||||||||||    
T  33604120 tcttgtgtttttctcaccttcaaa 33604097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 22580103 - 22580183
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||| || |||||||||| | ||||| ||| ||| ||||||||||||| ||||| |||||| ||||||||| |||||||    
T  22580103 acatcagttcagaagtagaactttatctgcttttgatcagtgttttcagcataggagaaaaagaagaaaaagccaacacaa 22580183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 30025231 - 30025163
Alignment:
Q  26 aagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||| | ||||| ||||||| || |||||||||||||||| |||| | |||||||||||||||||    
T  30025231 aagtagaactttatctgcttctgatcaatgttttcagcttaggagaaaacgaagaaaaagcaaacacaa 30025163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 41843271 - 41843351
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||| ||| ||||||| |||||||||||||||| || |||| | ||||||||  |||||||    
T  41843271 acatcacttcagaagtagaactctttctgcttctgatcagtgttttcagcttaagagaaaacgaagaaaaaggtaacacaa 41843351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 13731522 - 13731605
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| |||| ||||| | ||||||| | ||||||||||||||||| |||| | ||||||||| |||||||    
T  13731522 tggaaatcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 13731605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 16315383 - 16315466
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| |||| ||||| | ||||||| ||||||||||||||||||| |||| | ||||||| | |||||||    
T  16315383 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaacctaacacaa 16315466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 33692571 - 33692689
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtg-ttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccc 111  Q
    ||||||||| |||||| ||| ||||||||||||||| || || |||||||||||||| |||| | ||||||||         |||||||||||| |||||    
T  33692571 acatcacttcagaagtggaactctatctacttctgatcaatgtttttcagcttaggagaaaaggaagaaaaag-------ttaacacaattcaactcccc 33692663  T
Q  112 ttcttgtatttttctcaccttcaaac 137  Q
    || |||| ||||||||||||||||||    
T  33692664 tttttgtgtttttctcaccttcaaac 33692689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 8932995 - 8932954
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  8932995 aaaacacaattcaacccccttcttgtgtttttctcaccttca 8932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 13261524 - 13261636
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tcccct 112  Q
    ||||||||| ||||| |||| ||||| | ||||||| || ||| |||||||||||| |||| | ||||||||       ||||||||||||||  |||||    
T  13261524 acatcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaag-------aaaacacaattcaacccccct 13261616  T
Q  113 tcttgtatttttctcacctt 132  Q
    |||||| |||||||||||||    
T  13261617 tcttgtgtttttctcacctt 13261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 23280824 - 23280905
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||| |||  |||||| ||||||| ||||||||| |||||||||| |||||| ||||||| | |||||||    
T  23280824 acatcactttagaagtggaacactatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaacacaa 23280905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 12175183 - 12175263
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | |||||||||| ||||| ||||||| ||||||||||| ||| ||| |||||  ||||||| | |||||||    
T  12175183 acatcacttcaaaagtagaaatttatctgcttctgatcagtgttttcaactttggagaaaaacaagaaaaaaccaacacaa 12175263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 12367606 - 12367686
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||| | ||||||| ||||||||||| ||||||| |||| | ||||||||  |||||||    
T  12367606 acatcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaagataacacaa 12367686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 29936194 - 29936274
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| ||||| |||| ||||| | ||||||| || |||||||| |||| || |||| | |||||||||||||||||    
T  29936194 acatcacttcagaagcagaactctatttgcttctgatcaatgttttcatcttacgagaaaacgaagaaaaagcaaacacaa 29936274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 1292355 - 1292247
Alignment:
Q  20 cttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa--tccccttcttg 117  Q
    |||||||||||||| ||||||| ||||||| | |  ||||||| |||||| |||||| |||||||||        ||||||||||||  |||||||||||    
T  1292355 cttaagaagtagaattctatctgcttctgaactgcattttcag-ttaggagaaaaagaagaaaaagc-------taacacaattcaacctccccttcttg 1292264  T
Q  118 tatttttctcaccttca 134  Q
    | |||||||||||||||    
T  1292263 tgtttttctcaccttca 1292247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 8182192 - 8182153
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  8182192 aacacaattcaacccccttcttgtgtttttctcaccttca 8182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 9761925 - 9761886
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  9761925 aacacaattcaaaccccttcttgtgtttttctcaccttca 9761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 10884021 - 10884135
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaa-tccccttc 114  Q
    ||||||| ||||| | || ||||| | ||||||| ||||||||||||||||||| ||||   |||||||||        ||||||||||||  |||||||    
T  10884021 atcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagc-------taacacaattcaaccccccttc 10884113  T
Q  115 ttgtatttttctcaccttcaaa 136  Q
    |||| |||||||||||||||||    
T  10884114 ttgtgtttttctcaccttcaaa 10884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 13645763 - 13645680
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| |||| || ||||| |||| ||||| | ||||||| | ||||||||||||||||| |||| | ||||||||| |||||||    
T  13645763 tggaaatcagttcagaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 13645680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 4412889 - 4412931
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttcaa 135  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  4412889 aaaacacaattcaacccccttcttttgtttttctcaccttcaa 4412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 9802318 - 9802280
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttc 133  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  9802318 aacacaattcaacccccttcttgtgtttttctcaccttc 9802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 13302168 - 13302090
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| ||||| |||| ||||| | |||||||  |||||||||||||||||| |||| | ||||||| | |||||||    
T  13302168 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa 13302090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 15087862 - 15087800
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgacca-gtgttttcagcttaggataaaaa 75  Q
    ||||||||| |||||||||| ||||||| ||||||| || |||||||||||||| || |||||    
T  15087862 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttatgagaaaaa 15087800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 5001711 - 5001788
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| ||||| |||| | ||| | ||||||| ||||| ||||||||||||| |||| | ||||||||| ||||    
T  5001711 acatcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaaacgaagaaaaagctaaca 5001788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 16317445 - 16317517
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagc 86  Q
    ||||||||| ||||| |||| | ||| | ||||||| |||||||||||||||| || |||| | |||||||||    
T  16317445 acatcacttcagaagcagaactttatttgcttctgatcagtgttttcagcttatgagaaaacgaagaaaaagc 16317517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 9277 - 9197
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  9277 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 9197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 7509 - 7588
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  7509 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaagaaaaagccaacacaa 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 932 - 852
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||  |||||||    
T  932 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaa 852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 25739 - 25659
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||| | ||||||| ||||||||||||||||||| |||| | |||||||| ||||||||    
T  25739 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaa 25659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 28897 - 28853
Alignment:
Q  93 aaaacacaattcaatcccc--ttcttgtatttttctcaccttcaa 135  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  28897 aaaacacaattcaacccccccttcttgtatttttctcaccttcaa 28853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 111400 - 111480
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | |||||||| ||||||| ||||||| ||||||||||||||||||| | |||| ||||||||| |||||||    
T  111400 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaagccaacacaa 111480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 17642 - 17560
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaa--aaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||| |||  ||| ||||||||| |||||||    
T  17642 acatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaagaagaagaaaaagccaacacaa 17560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7976 - 7900
Alignment:
Q  18 cacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||| |||||| ||| ||||||| ||||||| ||||||||||||||||||| |||| | ||||||||| |||||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 752 - 832
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| || |||| ||||||| ||||||||||||||||||| ||| || ||||||||  |||||||    
T  752 acatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaagttaacacaa 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 102866 - 102795
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 85  Q
    ||||||||| |||||||||| ||||||| ||| ||| ||||||||||||||||||| |||| | ||||||||    
T  102866 acatcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaag 102795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 10907 - 10988
Alignment:
Q  14 acatcacttaagaagtagaaatctatctactt-ctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||| |||| | ||||||||| |||||||    
T  10907 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa 10988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 15571 - 15652
Alignment:
Q  14 acatcacttaagaagtagaaatctatctactt-ctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||| |||| | ||||||||| |||||||    
T  15571 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 83672 - 83591
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| |||| |||||| ||| ||||||| ||||||| ||||||||| |||||||||| |||||| ||||||||| |||||||    
T  83672 acataacttcagaagtggaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaa 83591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 83579 - 83527
Alignment:
Q  43 cttctgaccagtgtttt-cagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| ||||||||| |||||||||| |||||| ||||||||| |||||||    
T  83579 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaa 83527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 158457 - 158377
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| |||||| ||| ||||||| ||||| |  |||| |||||||||||||||||| | |||| ||||||||||||    
T  158457 acatcacttcagaagtggaactctatctgcttctaataagtgatttcagcttaggataaaacgaagaataagcaaacacaa 158377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 59902 - 59962
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaa 74  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||| | ||||| ||||    
T  59902 acatcacttcagaagtagaactctatctacttctgatcagtgttttcaacataggagaaaa 59962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 211671 - 211553
Alignment:
Q  14 acatcacttaagaa-gtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaat--ccc 110  Q
    ||||||||| |||| |||||| | ||||| ||||||| ||||||||||||||||||| |||| | | |||||||        |||||||||||||  |||    
T  211671 acatcacttcagaaagtagaattatatctgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagc-------taacacaattcaatccccc 211579  T
Q  111 cttcttgtatttttctcaccttcaaa 136  Q
    |||||||| |||||||||||||||||    
T  211578 cttcttgtgtttttctcaccttcaaa 211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 210715 - 210602
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaaaacacaattcaatcccctt 113  Q
    ||||| ||| |||||||||| ||||||| ||||||| | || ||||||| |||||| |||||  ||||||||| |||||||       ||||| ||||||    
T  210715 acatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaacaagaaaaagccaacacaa-------ttcaaccccctt 210624  T
Q  114 cttgtatttttctcaccttcaa 135  Q
    ||||| ||||||||||||||||    
T  210623 cttgtgtttttctcaccttcaa 210602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 378348 - 378431
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||| ||||||| ||||| |||| ||||| | |||||||  ||||||||||| |||||| |||| | ||||||||| |||||||    
T  378348 tggaaatcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaaacgaagaaaaagctaacacaa 378431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 219476 - 219431
Alignment:
Q  95 aacacaattcaatcccctt-cttgtatttttctcaccttcaaacac 139  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  219476 aacacaattcaaccccctttcttatatttttctcaccttcaaacac 219431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 245126 - 245166
Alignment:
Q  95 aacacaattcaa-tccccttcttgtatttttctcaccttca 134  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  245126 aacagaattcaactccccttcttgtatttttctcaccttca 245166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 2816 - 2894
Alignment:
Q  16 atcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| ||||| |||| ||||| | |||||||  |||||||||||||||||| |||| | ||||||||| |||||||    
T  2816 atcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa 2894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 7193 - 7119
Alignment:
Q  11 tggacatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaag 85  Q
    |||| ||||||||||||| | || ||||| | ||||||| ||||||||||||||||||| |||||  ||||||||    
T  7193 tggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaataagaaaaag 7119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 7095 - 7054
Alignment:
Q  93 aaaacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  7095 aaaacacaattcaacccccttcttgtgtttttctcaccttca 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 492 - 541
Alignment:
Q  35 tctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaa 84  Q
    ||||||| ||||||| ||||||||||||||||||| |||||| |||||||    
T  492 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 24576 - 24652
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaaca 91  Q
    ||||||||| |||||||||  ||||||| |||||||  ||||||||||| |||||| |||||| ||||| ||||||||    
T  24576 acatcacttcagaagtagagctctatctgcttctgattagtgttttcag-ttaggagaaaaagaagaaagagcaaaca 24652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 9209 - 9137
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagc 86  Q
    ||||||||| ||||| || | ||||| | ||||||| ||||||||||||||||||| |||| | |||||||||    
T  9209 acatcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagc 9137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 19454 - 19534
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||| | |||||||||| ||||||| |||||||  |||||||||||| || || |||| | ||||||||| |||||||    
T  19454 acatcacgtcagaagtagaactctatctgcttctgattagtgttttcagcataagagaaaacgaagaaaaagccaacacaa 19534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 2627 - 2666
Alignment:
Q  95 aacacaattcaatccccttcttgtatttttctcaccttca 134  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  2627 aacacaattcaacccccttcttgtatttttctcacattca 2666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 79159 - 79207
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcag 62  Q
    ||||||||| |||||||||| ||||||| ||||| | ||||||||||||    
T  79159 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcag 79207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 559 - 516
Alignment:
Q  94 aaacacaattcaatcccc--ttcttgtatttttctcaccttcaa 135  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||    
T  559 aaacacaattcaatccccccttcttgtgtttttctcaccttcaa 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 852 - 895
Alignment:
Q  94 aaacacaattcaatcccc--ttcttgtatttttctcaccttcaa 135  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||    
T  852 aaacacaattcaatccccccttcttgtgtttttctcaccttcaa 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 5431 - 5364
Alignment:
Q  26 aagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    |||||||| ||||||| ||||||| |  | ||||||| ||||||||||||| ||||||||| |||||||    
T  5431 aagtagaactctatctgcttctgatctatattttcag-ttaggataaaaagaagaaaaagccaacacaa 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 320 - 363
Alignment:
Q  93 aaaacacaattcaa--tccccttcttgtatttttctcaccttca 134  Q
    ||||||||||||||  |||||||||||| |||||||||||||||    
T  320 aaaacacaattcaacctccccttcttgtgtttttctcaccttca 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 14425 - 14345
Alignment:
Q  14 acatcacttaagaagtagaaatctatctacttctgaccagtgttttcagcttaggataaaaaggagaaaaagcaaacacaa 94  Q
    ||||||||| | ||| |||| ||||| | ||| ||| || |||||||||||||||| |||| | ||||||||| |||||||    
T  14425 acatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaa 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University