View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6694_low_21 (Length: 228)

Name: NF6694_low_21
Description: NF6694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6694_low_21
NF6694_low_21
[»] chr2 (42 HSPs)
chr2 (19-228)||(27393006-27393215)
chr2 (29-228)||(21703159-21703358)
chr2 (29-224)||(19456420-19456615)
chr2 (29-224)||(27118735-27118930)
chr2 (29-224)||(34303302-34303497)
chr2 (29-224)||(3784701-3784896)
chr2 (29-224)||(16163646-16163841)
chr2 (29-188)||(34157058-34157217)
chr2 (67-224)||(40233596-40233753)
chr2 (48-224)||(12655608-12655784)
chr2 (48-224)||(23128565-23128741)
chr2 (48-224)||(28882280-28882456)
chr2 (48-224)||(27434443-27434619)
chr2 (64-224)||(27803789-27803949)
chr2 (29-197)||(31891354-31891522)
chr2 (48-224)||(32049864-32050040)
chr2 (48-224)||(34279515-34279691)
chr2 (64-224)||(39051821-39051981)
chr2 (64-224)||(12586892-12587052)
chr2 (64-224)||(12716601-12716761)
chr2 (48-224)||(21677181-21677357)
chr2 (64-224)||(27777304-27777464)
chr2 (64-224)||(27817062-27817222)
chr2 (48-224)||(37925559-37925735)
chr2 (55-224)||(16829337-16829506)
chr2 (55-224)||(16891975-16892144)
chr2 (48-209)||(34286420-34286581)
chr2 (48-209)||(34291480-34291641)
chr2 (67-224)||(37375246-37375403)
chr2 (48-224)||(11635185-11635361)
chr2 (48-224)||(11641374-11641550)
chr2 (64-224)||(13936543-13936703)
chr2 (48-224)||(20837984-20838160)
chr2 (48-224)||(34861746-34861922)
chr2 (48-224)||(37685908-37686084)
chr2 (48-224)||(37701173-37701349)
chr2 (90-224)||(260752-260886)
chr2 (48-224)||(22926027-22926203)
chr2 (64-227)||(9349978-9350141)
chr2 (48-224)||(31876347-31876523)
chr2 (55-224)||(19416498-19416667)
chr2 (55-224)||(39890147-39890316)
[»] chr8 (23 HSPs)
chr8 (19-228)||(22080843-22081052)
chr8 (29-188)||(19659044-19659203)
chr8 (29-224)||(33244716-33244911)
chr8 (29-224)||(44563152-44563346)
chr8 (48-224)||(16277624-16277800)
chr8 (29-188)||(9354673-9354832)
chr8 (31-224)||(16283502-16283695)
chr8 (48-224)||(19688168-19688344)
chr8 (48-224)||(27608874-27609050)
chr8 (48-224)||(14557694-14557870)
chr8 (48-224)||(19286532-19286708)
chr8 (48-224)||(29829392-29829568)
chr8 (48-224)||(31489719-31489895)
chr8 (55-224)||(12092693-12092862)
chr8 (48-224)||(18710656-18710832)
chr8 (48-224)||(2137228-2137404)
chr8 (48-224)||(19674511-19674687)
chr8 (48-224)||(31354594-31354770)
chr8 (67-228)||(3329472-3329633)
chr8 (48-224)||(19208329-19208505)
chr8 (55-224)||(33258800-33258969)
chr8 (48-224)||(28361924-28362100)
chr8 (140-224)||(189256-189340)
[»] chr4 (25 HSPs)
chr4 (19-228)||(15391344-15391553)
chr4 (19-228)||(14235531-14235740)
chr4 (29-224)||(15227936-15228131)
chr4 (29-224)||(1900323-1900518)
chr4 (29-224)||(15284938-15285133)
chr4 (29-224)||(24460615-24460810)
chr4 (48-224)||(14763314-14763490)
chr4 (48-224)||(17014085-17014261)
chr4 (48-224)||(24592324-24592500)
chr4 (64-224)||(33673808-33673968)
chr4 (48-224)||(31126528-31126704)
chr4 (48-224)||(54833472-54833648)
chr4 (55-224)||(14665110-14665279)
chr4 (48-224)||(6569938-6570114)
chr4 (48-224)||(18800623-18800799)
chr4 (64-228)||(34188966-34189130)
chr4 (64-224)||(39850739-39850899)
chr4 (55-224)||(21969793-21969962)
chr4 (67-224)||(36344525-36344682)
chr4 (48-224)||(5005958-5006134)
chr4 (48-224)||(14098626-14098802)
chr4 (64-228)||(24112763-24112927)
chr4 (48-224)||(27163327-27163503)
chr4 (48-224)||(30753839-30754015)
chr4 (48-224)||(40105648-40105824)
[»] scaffold0109 (1 HSPs)
scaffold0109 (19-228)||(21602-21811)
[»] scaffold0124 (2 HSPs)
scaffold0124 (29-228)||(20439-20637)
scaffold0124 (55-224)||(30529-30698)
[»] chr7 (36 HSPs)
chr7 (29-228)||(16041375-16041574)
chr7 (29-224)||(16449894-16450089)
chr7 (29-227)||(2108898-2109096)
chr7 (29-227)||(26484746-26484944)
chr7 (29-227)||(2775411-2775609)
chr7 (29-224)||(31088360-31088555)
chr7 (29-227)||(39210916-39211114)
chr7 (40-224)||(45733523-45733707)
chr7 (48-224)||(5128063-5128239)
chr7 (48-224)||(2154644-2154820)
chr7 (48-224)||(16518312-16518488)
chr7 (115-227)||(4200685-4200797)
chr7 (48-224)||(5147236-5147412)
chr7 (48-224)||(10916764-10916940)
chr7 (48-224)||(16503276-16503452)
chr7 (48-224)||(26435328-26435504)
chr7 (55-224)||(31564286-31564455)
chr7 (48-224)||(3445377-3445553)
chr7 (48-224)||(11424672-11424848)
chr7 (29-228)||(18540851-18541050)
chr7 (67-224)||(26537766-26537923)
chr7 (48-224)||(26274990-26275166)
chr7 (48-224)||(45387414-45387590)
chr7 (48-224)||(4145019-4145195)
chr7 (64-228)||(5159606-5159770)
chr7 (48-224)||(11441643-11441819)
chr7 (48-224)||(16736356-16736532)
chr7 (48-224)||(16751410-16751586)
chr7 (48-224)||(17523603-17523779)
chr7 (48-224)||(17529436-17529612)
chr7 (48-224)||(26319765-26319941)
chr7 (48-224)||(26669810-26669986)
chr7 (115-224)||(26682896-26683005)
chr7 (55-224)||(31124998-31125167)
chr7 (48-224)||(9618722-9618898)
chr7 (55-224)||(24592437-24592606)
[»] chr5 (51 HSPs)
chr5 (41-228)||(22888542-22888729)
chr5 (29-228)||(25199089-25199288)
chr5 (31-228)||(23892268-23892465)
chr5 (40-228)||(29888985-29889173)
chr5 (29-227)||(11325854-11326052)
chr5 (29-227)||(33877307-33877505)
chr5 (29-224)||(13184555-13184750)
chr5 (29-224)||(13440401-13440596)
chr5 (48-224)||(24688064-24688240)
chr5 (55-224)||(22999021-22999190)
chr5 (48-209)||(24970097-24970258)
chr5 (55-224)||(30934719-30934888)
chr5 (67-228)||(37671386-37671547)
chr5 (48-224)||(9548450-9548626)
chr5 (48-224)||(11549433-11549609)
chr5 (64-224)||(13324736-13324896)
chr5 (48-224)||(15658667-15658843)
chr5 (48-224)||(18500637-18500813)
chr5 (48-224)||(23717895-23718071)
chr5 (48-224)||(31431519-31431695)
chr5 (67-228)||(37770890-37771051)
chr5 (48-224)||(2511130-2511306)
chr5 (48-224)||(8665382-8665558)
chr5 (48-224)||(15758764-15758940)
chr5 (48-224)||(23752357-23752533)
chr5 (64-224)||(24681535-24681695)
chr5 (64-224)||(24724062-24724222)
chr5 (48-224)||(30168548-30168724)
chr5 (48-224)||(31826314-31826490)
chr5 (48-224)||(33777566-33777742)
chr5 (64-224)||(40473456-40473616)
chr5 (55-224)||(33516442-33516611)
chr5 (48-224)||(28649314-28649490)
chr5 (48-224)||(30152097-30152273)
chr5 (64-228)||(33292620-33292784)
chr5 (48-224)||(43078331-43078507)
chr5 (70-224)||(37755081-37755235)
chr5 (67-224)||(32599379-32599536)
chr5 (55-224)||(37358550-37358719)
chr5 (48-224)||(6874384-6874560)
chr5 (48-224)||(9317530-9317706)
chr5 (48-224)||(12132234-12132410)
chr5 (48-224)||(41674788-41674964)
chr5 (55-224)||(28959693-28959862)
chr5 (48-224)||(26480471-26480647)
chr5 (55-224)||(29966973-29967142)
chr5 (55-224)||(30029501-30029670)
chr5 (55-224)||(34616604-34616773)
chr5 (48-224)||(18375319-18375495)
chr5 (48-203)||(5637989-5638144)
chr5 (67-224)||(3789639-3789796)
[»] chr1 (8 HSPs)
chr1 (29-228)||(16208037-16208236)
chr1 (19-228)||(20340341-20340550)
chr1 (29-197)||(20461131-20461299)
chr1 (29-227)||(28151912-28152110)
chr1 (48-224)||(51638287-51638463)
chr1 (48-224)||(10962739-10962915)
chr1 (48-224)||(28585050-28585226)
chr1 (48-224)||(41793318-41793494)
[»] scaffold0415 (2 HSPs)
scaffold0415 (48-228)||(1924-2103)
scaffold0415 (48-224)||(6082-6260)
[»] scaffold0558 (1 HSPs)
scaffold0558 (29-227)||(35-233)
[»] chr6 (47 HSPs)
chr6 (29-228)||(27290319-27290518)
chr6 (29-224)||(22456887-22457082)
chr6 (29-197)||(22477253-22477421)
chr6 (29-227)||(13522023-13522221)
chr6 (29-224)||(33374209-33374404)
chr6 (29-227)||(14143235-14143433)
chr6 (29-227)||(26787992-26788190)
chr6 (29-227)||(27196365-27196563)
chr6 (29-227)||(27252677-27252875)
chr6 (29-188)||(8892299-8892458)
chr6 (29-188)||(8903534-8903693)
chr6 (29-224)||(28162705-28162900)
chr6 (55-224)||(22934833-22935002)
chr6 (55-224)||(23857278-23857447)
chr6 (55-228)||(4545724-4545897)
chr6 (55-224)||(26989075-26989244)
chr6 (48-224)||(13298904-13299080)
chr6 (48-224)||(16749921-16750097)
chr6 (29-197)||(20160749-20160917)
chr6 (29-197)||(22171914-22172082)
chr6 (48-224)||(24304571-24304747)
chr6 (48-224)||(24863784-24863960)
chr6 (48-224)||(26918447-26918623)
chr6 (48-224)||(29549542-29549718)
chr6 (58-228)||(4525363-4525533)
chr6 (55-224)||(4757838-4758007)
chr6 (55-224)||(27359945-27360114)
chr6 (55-224)||(27450288-27450457)
chr6 (48-224)||(3696148-3696324)
chr6 (64-224)||(17025360-17025520)
chr6 (48-224)||(27000140-27000316)
chr6 (67-224)||(4773092-4773249)
chr6 (67-224)||(26116363-26116520)
chr6 (55-224)||(30557969-30558138)
chr6 (48-228)||(4724083-4724263)
chr6 (88-224)||(34463299-34463435)
chr6 (67-224)||(27007813-27007970)
chr6 (48-224)||(27044454-27044631)
chr6 (48-224)||(15424270-15424446)
chr6 (48-203)||(27272554-27272709)
chr6 (67-224)||(16674225-16674382)
chr6 (55-224)||(26777568-26777737)
chr6 (55-224)||(27485203-27485372)
chr6 (55-224)||(29501489-29501658)
chr6 (48-224)||(28207521-28207697)
chr6 (64-224)||(29573096-29573256)
chr6 (55-224)||(16943980-16944149)
[»] chr3 (60 HSPs)
chr3 (40-224)||(18530411-18530595)
chr3 (48-224)||(16626557-16626733)
chr3 (29-224)||(5652399-5652594)
chr3 (29-227)||(31034165-31034363)
chr3 (29-227)||(32292764-32292962)
chr3 (29-224)||(4625956-4626151)
chr3 (29-224)||(17993835-17994030)
chr3 (31-224)||(8295986-8296179)
chr3 (48-224)||(8301318-8301494)
chr3 (48-224)||(15741145-15741321)
chr3 (48-224)||(15892757-15892933)
chr3 (48-224)||(18330700-18330876)
chr3 (48-224)||(22387629-22387805)
chr3 (48-224)||(7073243-7073419)
chr3 (48-224)||(18277103-18277279)
chr3 (48-224)||(18292404-18292580)
chr3 (48-224)||(18307705-18307881)
chr3 (48-224)||(22870907-22871083)
chr3 (48-224)||(22885966-22886142)
chr3 (48-224)||(29148806-29148982)
chr3 (64-224)||(29665021-29665181)
chr3 (58-228)||(6542509-6542679)
chr3 (67-224)||(11110400-11110557)
chr3 (55-224)||(18051300-18051469)
chr3 (48-209)||(28116020-28116181)
chr3 (48-224)||(4416950-4417126)
chr3 (48-224)||(4796704-4796880)
chr3 (64-224)||(20576898-20577058)
chr3 (48-224)||(36997128-36997304)
chr3 (48-224)||(51782054-51782230)
chr3 (67-224)||(4346738-4346895)
chr3 (48-224)||(51797143-51797320)
chr3 (48-224)||(5013743-5013919)
chr3 (48-224)||(5467016-5467192)
chr3 (48-224)||(5609373-5609549)
chr3 (48-224)||(8211769-8211945)
chr3 (48-224)||(21674724-21674900)
chr3 (48-224)||(28339333-28339509)
chr3 (64-228)||(32439201-32439365)
chr3 (48-224)||(47023484-47023660)
chr3 (48-227)||(5713258-5713437)
chr3 (48-227)||(5724168-5724347)
chr3 (48-227)||(5757130-5757309)
chr3 (48-227)||(5768021-5768200)
chr3 (58-203)||(10396174-10396319)
chr3 (67-224)||(48465977-48466134)
chr3 (48-224)||(6192347-6192523)
chr3 (48-224)||(7996593-7996769)
chr3 (48-224)||(10643101-10643277)
chr3 (64-228)||(20066090-20066254)
chr3 (48-224)||(31964524-31964700)
chr3 (48-224)||(50134122-50134298)
chr3 (55-224)||(5596408-5596577)
chr3 (55-224)||(18242777-18242946)
chr3 (55-224)||(24328197-24328366)
chr3 (48-224)||(17985007-17985183)
chr3 (48-224)||(28021306-28021482)
chr3 (48-224)||(35880797-35880973)
chr3 (48-209)||(4721662-4721823)
chr3 (55-224)||(18225229-18225398)
[»] scaffold0260 (1 HSPs)
scaffold0260 (19-228)||(2664-2873)
[»] scaffold0639 (1 HSPs)
scaffold0639 (124-224)||(628-728)
[»] scaffold0089 (3 HSPs)
scaffold0089 (55-224)||(46995-47164)
scaffold0089 (48-224)||(40079-40255)
scaffold0089 (48-224)||(29833-30009)
[»] scaffold0336 (1 HSPs)
scaffold0336 (48-224)||(9636-9812)
[»] scaffold0159 (2 HSPs)
scaffold0159 (48-224)||(9076-9252)
scaffold0159 (48-224)||(20085-20261)
[»] scaffold0143 (1 HSPs)
scaffold0143 (48-224)||(27362-27538)
[»] scaffold0029 (1 HSPs)
scaffold0029 (48-224)||(139-315)
[»] scaffold0350 (1 HSPs)
scaffold0350 (48-224)||(7249-7425)
[»] scaffold0038 (1 HSPs)
scaffold0038 (48-224)||(8019-8195)
[»] scaffold0144 (1 HSPs)
scaffold0144 (48-224)||(26211-26388)
[»] scaffold0237 (1 HSPs)
scaffold0237 (48-224)||(14940-15116)


Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 27393006 - 27393215
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||| || ||| ||||    
T  27393006 gccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggcaagcctccacctaacccgttgcctcccaggttccattctgacctca 27393105  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27393106 agtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaagttaacttt 27393205  T
Q  219 tgagaacaat 228  Q
    ||||||||||    
T  27393206 tgagaacaat 27393215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 21703358 - 21703159
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||| ||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| |||||    
T  21703358 tcccgactctacttctcagagggcactgcacaaccagacaggacaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 21703259  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  21703258 ccatcaaggtgctctgggtcatgatgtcaaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaacttttgagaacaat 21703159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 19456615 - 19456420
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| |||||    
T  19456615 tcccgactctacttctcatagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 19456516  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||| || || ||||| || || ||||||||    
T  19456515 ccatcaaggtgctctgggtcatgatgttgaagaatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 19456420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 27118735 - 27118930
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | |||| ||||| || ||||||||  || |||||||| |||||    
T  27118735 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccgtcgcctcccaagttccgttcggacctcaagtgtgattt 27118834  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  27118835 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 27118930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 34303497 - 34303302
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | |||| ||||| || ||||||||  || |||||||| |||||    
T  34303497 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccgtcgcctcccaagttccgttcggacctcaagtgtgattt 34303398  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  34303397 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 34303302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 3784701 - 3784896
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  3784701 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 3784800  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  3784801 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 3784896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 16163646 - 16163841
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  16163646 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 16163745  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||  |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  16163746 ccatcaaggtgctatgggtcatgatggcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 16163841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 34157058 - 34157217
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  34157058 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 34157157  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaa 188  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| ||||||||||||    
T  34157158 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa 34157217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 40233596 - 40233753
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||||| | ||| ||||| || ||||||| ||||||||||||||| |||||||| ||||||||||    
T  40233596 cagggtaagcccccacctgatccgttgcctccaaggttccggtctgacctcaaatgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgtt 40233695  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  40233696 atgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 40233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 12655608 - 12655784
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  12655608 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 12655707  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  12655708 catgatgtcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 12655784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 23128741 - 23128565
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | ||||||||| |||||     
T  23128741 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggt 23128642  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  23128641 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 23128565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 28882280 - 28882456
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  |||||||| || ||||| | |||||| || |||||     
T  28882280 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 28882379  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  28882380 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 28882456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 27434619 - 27434443
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | |||||||||| || |||| | |  || ||||| || ||||||| |||||| || |||||     
T  27434619 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctcccaagttcaggtccgacctcaaatgtgatttccatcaaggcgccctgggt 27434520  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  27434519 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 27434443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 27803789 - 27803949
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | ||||||||||| || || |    
T  27803789 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggccatgatgtcgaggggt 27803888  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  27803889 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27803949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 31891522 - 31891354
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | ||||||||||  |||||| | |  |||||||| || |||||    
T  31891522 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattt 31891423  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcat 197  Q
     | |||||| || ||||| |||||||| || || || ||||| |||| |||||||||||| || |||||    
T  31891422 tcatcaaggcgccctgggtcatgatgtcgaggggtgctacgcgttgaggtacattgtaaaaaaactcat 31891354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 32049864 - 32050040
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| || || || ||  ||||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  32049864 agggcattgtacaactagacagggtaaacccccaccggacccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 32049963  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  32049964 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 32050040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 34279515 - 34279691
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  34279515 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 34279614  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  34279615 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 34279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 39051981 - 39051821
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | ||||||||||| || || |    
T  39051981 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggccatgatgtcgaggggt 39051882  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  39051881 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 39051821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 12586892 - 12587052
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| |||||||    
T  12586892 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaaggat 12586991  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  12586992 gttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 12587052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 12716761 - 12716601
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  12716761 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 12716662  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  12716661 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 12716601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 21677357 - 21677181
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  21677357 agggcattgtacaactagacagggcaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 21677258  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  21677257 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 21677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 27777304 - 27777464
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  27777304 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 27777403  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  27777404 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 27817062 - 27817222
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  27817062 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 27817161  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  27817162 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27817222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 37925559 - 37925735
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||  ||||||||||||  |||||| | | ||||||||| ||||| |||| ||||||||| || ||     
T  37925559 agggcattgtacaactagacagggtaagcccccacccgacccgttgcctccaaggttcaggtctgatctcaaatgcgacttccatcaaggtgccctaggt 37925658  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  37925659 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 37925735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 16829506 - 16829337
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | |||||| || || || || | |||||||||  | || |||||||    
T  16829506 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatg 16829407  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  16829406 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 16829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 16891975 - 16892144
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | |||||| || || || || | |||||||||  | || |||||||    
T  16891975 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatg 16892074  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  16892075 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 16892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 34286420 - 34286581
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  34286420 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 34286519  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaa 209  Q
    || ||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||    
T  34286520 cacgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaa 34286581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 34291480 - 34291641
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  34291480 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 34291579  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaa 209  Q
    || ||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||    
T  34291580 cacgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaa 34291641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 37375246 - 37375403
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || || |||||||| || || ||||    
T  37375246 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgtt 37375345  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||||||| |||||||||||||  | |||||||||||    
T  37375346 atgctttgaagtatatcgtgaagaagctcgttgatcagggaaagctgacttttgagaa 37375403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 11635361 - 11635185
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  11635361 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 11635262  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||||||| || ||||| |||||||||||||| || ||||||||  ||||||| || ||  | |||||||||||    
T  11635261 catgatgttgaggggtgttatgctttgaagtacatcgtgaagaagcttgttgatcaagggaagctgacttttgagaa 11635185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 11641550 - 11641374
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  11641550 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 11641451  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||||||| || ||||| |||||||||||||| || ||||||||  ||||||| || ||  | |||||||||||    
T  11641450 catgatgttgaggggtgttatgctttgaagtacatcgtgaagaagcttgttgatcaagggaagctgacttttgagaa 11641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 13936703 - 13936543
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  13936703 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 13936604  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| |||||||||||||| || ||||||||||||||||| || ||  | |||||||||||    
T  13936603 gttatgctttgaagtacatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 13936543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 20837984 - 20838160
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | | |||||||| ||||||| | |  || || || || ||||||| |||||| || |||||     
T  20837984 agggcattgtacaactagacagggcaagcccccacctgatctgttgcctcccaggttcaggtccgaccttaaatgtgatttccatcaaggcgccctgggt 20838083  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  20838084 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 20838160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 34861746 - 34861922
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  34861746 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 34861845  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  34861846 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 34861922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 37686084 - 37685908
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  37686084 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 37685985  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  37685984 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 37685908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 37701349 - 37701173
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  37701349 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 37701250  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  37701249 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 37701173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 224
Target Start/End: Complemental strand, 260886 - 260752
Alignment:
Q  90 gttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaag 189  Q
    ||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||| ||||||||||| || || |||    
T  260886 gttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcgtgaag 260787  T
Q  190 aagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||||||||||||||||  | |||||||||||    
T  260786 aagctcattgatcagggaaagctgacttttgagaa 260752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 22926203 - 22926027
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  22926203 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 22926104  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  22926103 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 22926027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 9350141 - 9349978
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||| ||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  9350141 aggcaaggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 9350042  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||  | ||||||||||||||    
T  9350041 gttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaacaa 9349978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 31876347 - 31876523
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  ||||     
T  31876347 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggt 31876446  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  31876447 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 31876523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 19416667 - 19416498
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || || |||||||    
T  19416667 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatg 19416568  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| |||||||| || || || ||||| ||||| ||||| || ||  | |||||||||||    
T  19416567 tcgaggggtgttatgctttgaaatatatcgtgaagaaactcatcgatcaagggaagctgacttttgagaa 19416498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 39890147 - 39890316
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| |   ||||||||| || || || | |||||||||  | || |||||||    
T  39890147 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcagggctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 39890246  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||| ||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  39890247 tcgaggggtgttatgctctgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 39890316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 22081052 - 22080843
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  22081052 gccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggaaagcctccacctaacccgttgcctcccaggttccgttctgacctca 22080953  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  22080952 agtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgaccagggaaagttaacttt 22080853  T
Q  219 tgagaacaat 228  Q
    ||||||||||    
T  22080852 tgagaacaat 22080843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 19659203 - 19659044
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||  || |||||||| |||||||||||||| ||| |||||| ||||| || ||||||||  || |||||||| |||||    
T  19659203 tcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccacctgacccgtcgcctcccaagttccgttcggacctcaagtgtgattt 19659104  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaa 188  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| ||||||||||||    
T  19659103 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa 19659044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 33244716 - 33244911
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||  || |||||||| |||||||||||||| ||| |||||| |||||  | ||||||||  || |||||||| |||||    
T  33244716 tcccgactctacttctcaaagggcgctgcacaaccagacagggcaagcctccacctgacccgtcgcctcctaagttccgttcggacctcaagtgtgattt 33244815  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||| ||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  33244816 ccatcaaggtgcgctgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 33244911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 44563152 - 44563346
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  44563152 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 44563251  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || |||||||||||    
T  44563252 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa-aaactcatagaccaaggaaagttgacttttgagaa 44563346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 16277624 - 16277800
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  |||||||| || ||||| | |||||| || |||||     
T  16277624 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 16277723  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  16277724 catgatgtcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 16277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 9354673 - 9354832
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | || ||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  9354673 tcccgactctactcctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 9354772  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaa 188  Q
    || |||||||||| |||| ||||| || |||||||| ||||| |||| ||||||||||||    
T  9354773 ccatcaaggtgctatgggtcatgacgtcgaaggatgctacgcgttgaggtacattgtaaa 9354832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 224
Target Start/End: Original strand, 16283502 - 16283695
Alignment:
Q  31 ccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttcc 130  Q
    |||||||| || || | |||||| ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  || ||||| || |||||||    
T  16283502 ccgactttactccttagagggcattgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttcc 16283601  T
Q  131 gtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
     ||||||  | ||||| |||||||| ||||| || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  16283602 atcaaggcaccctgggtcatgatgtcgaagggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 16283695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 19688168 - 19688344
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | ||||||||| |||||     
T  19688168 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggt 19688267  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| ||||| || |||||||||||    
T  19688268 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagttgacttttgagaa 19688344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 27609050 - 27608874
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  27609050 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 27608951  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || ||||| || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  27608950 catgatgtcgagggatgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 27608874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 14557694 - 14557870
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| |||||||||||  ||||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  14557694 agggcattgtacaaccagacagggcaagccctcgcctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 14557793  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  14557794 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 14557870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 19286532 - 19286708
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| |||||||||||||| || ||| ||||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  19286532 agggcattgtacaactaggcagggcaagcccccacctgacccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 19286631  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  19286632 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 19286708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 29829392 - 29829568
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| ||||| ||||| ||||| || ||| | ||||||||||  |||||||| | |||||| || || ||||| | |||||||||  | ||     
T  29829392 agggcattgtaccaccagacagggtaagcccccacctgatccgttgcctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggt 29829491  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  29829492 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 29829568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 31489895 - 31489719
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| |||||||| | |||||||||  | ||     
T  31489895 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggt 31489796  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  31489795 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 31489719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 12092862 - 12092693
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||| | || |||||||    
T  12092862 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatg 12092763  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  12092762 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 12092693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 18710656 - 18710832
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| |||||  | ||| | ||| ||||||  |||||| | | |||||||||||| ||||| | ||| ||||| || ||     
T  18710656 agggcattgtacaactagacagggtaagccctcacctgatccgctgcctccaaggttcaggtctgatctcaagtgtgattttcatcagggtgccctaggt 18710755  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || |||||||| ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  18710756 catgatgtcgagggatgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 18710832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 2137404 - 2137228
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| ||  ||||     
T  2137404 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccttgggt 2137305  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  2137304 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 2137228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 19674511 - 19674687
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||| || || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  19674511 agggcattgtacaactagacagggcaaacccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 19674610  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| ||  | ||||| ||||||||||| ||||| ||||||||||||||||| || ||  | |||||||||||    
T  19674611 catgatgtcgagaggtgttatgctttgaagtatattgtgaagaagctcattgatcaagggaagctgacttttgagaa 19674687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 31354594 - 31354770
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | || |||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  31354594 agggcattgtacaactagacagggcaagcctccacctgatcctttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 31354693  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  31354694 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 31354770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 3329633 - 3329472
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||| | || |||||||| || || ||||    
T  3329633 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgtt 3329534  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | ||||||||||| || || ||||||||| ||||||| || ||  | |||||||||||||||    
T  3329533 atgctttgaagtatatcgtgaagaagctcgttgatcaagggaagctgacttttgagaacaat 3329472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 19208505 - 19208329
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  19208505 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 19208406  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  19208405 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 19208329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 33258800 - 33258969
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  |||| ||||| |    
T  33258800 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacg 33258899  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  33258900 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 33258969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 28362100 - 28361924
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  28362100 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 28362001  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  28362000 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 28361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 189256 - 189340
Alignment:
Q  140 ctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||| |||||||| || || || |||||||||||||| || || || ||||| |||||||| |||||  | |||||||||||    
T  189256 ctctgggtcatgatgtcgaggggtgctacgctttgaagtatatcgtgaaaaagcttattgatcaaggaaagctgacttttgagaa 189340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 15391553 - 15391344
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    |||||| || ||||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  15391553 gccgagttgctcccgactttgcttctcaaagggcactgcacaaccaggcaggggaagcctccacctaacccgttgcctcccaggttccgttctgacctca 15391454  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  15391453 agtgcgatttccatcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgactagggaaagttaacttt 15391354  T
Q  219 tgagaacaat 228  Q
    ||||||||||    
T  15391353 tgagaacaat 15391344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 14235740 - 14235531
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    ||||||||| |||||||| ||||||| |||||||| ||||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||| || ||||    
T  14235740 gccgagctgctcccgactctgcttcttaaagggcactgtacaaccagacagggcaagcctccacctaaccctttgcctcccaggttccatttcgacctca 14235641  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    | || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  14235640 aatgtgatttccatcaaggtgctctgggccatgatgttgagggatgttacgctttgaagttcattgtaaagaagctcatagaccagggaaagttaacttt 14235541  T
Q  219 tgagaacaat 228  Q
    ||||||||||    
T  14235540 tgagaacaat 14235531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 15227936 - 15228131
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| ||||||||||| ||||| |||||||| ||| | || ||||||| ||||||||||| ||| |||||||| |||||    
T  15227936 tcccgactctacttctcagagggcactgtacaaccagacagggtaagcctccacctgatccattgcctcccaggttccgttctgacctcaagtgtgattt 15228035  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  15228036 ccatcaaggtgctctgggtcacgatgttgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaacctttgagaa 15228131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 1900323 - 1900518
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| || || |||||||| ||| | ||||||| ||||||||| |||| ||| |||||||| |||||    
T  1900323 tcccgactctacttctcagagggcactgcacaaccagacatggtaagcctccacctgatccgttgcttctcaggtttcgttctgacctcaagtgtgattt 1900422  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  1900423 ccatcaaggtgctctgggtcatgatgttgaaggatgctacactttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaa 1900518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 15285133 - 15284938
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||| | ||| |||||||| |||||    
T  15285133 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccggtctgacctcaagtgtgattt 15285034  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| || || ||||| || || ||||||||    
T  15285033 ccatcaaggtgctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 15284938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 24460810 - 24460615
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  24460810 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 24460711  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  24460710 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 24460615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 14763490 - 14763314
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  14763490 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 14763391  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  14763390 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 14763314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 17014085 - 17014261
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  || ||||| || ||||| | |||||| || |||||     
T  17014085 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgacctcaaatgtgattttcatcaaggcgccctgggt 17014184  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  17014185 catgatgtcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 17014261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 24592500 - 24592324
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  24592500 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 24592401  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  24592400 catgatgtcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 24592324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 33673968 - 33673808
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  ||||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || |    
T  33673968 aggcagggcaagcctccaccggacccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 33673869  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  33673868 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 33673808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 31126704 - 31126528
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| ||||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  31126704 agggcattgtacaactagacagggtaagcccccacctgacccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 31126605  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  31126604 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 31126528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 54833472 - 54833648
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| |||||||||||||| || ||| ||||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  54833472 agggcattgtacaactaggcagggcaagcccccacctgacccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 54833571  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  54833572 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 54833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 14665110 - 14665279
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || ||||| |||||||    
T  14665110 tgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatg 14665209  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  14665210 tcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 14665279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 6569938 - 6570114
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||| | ||     
T  6569938 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgctttaggt 6570037  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  6570038 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 6570114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 18800799 - 18800623
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| |||||||| | |||||||||  | ||     
T  18800799 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggt 18800700  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  18800699 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 18800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 34189130 - 34188966
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| ||||| || |||| |||||||||| | || ||||||||||| || |    
T  34189130 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggtgctttagggcatgatgttgaggggt 34189031  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  34189030 gctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 34188966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 39850739 - 39850899
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||| | || |||||||| || || |    
T  39850739 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgctttaggtcatgatgtcgaggggt 39850838  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || ||||||||| |||||||||||||  | |||||||||||    
T  39850839 gttatgctttgaagtatatcgtgaagaagctcgttgatcagggaaagctgacttttgagaa 39850899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 21969793 - 21969962
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||| || ||||| ||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||    
T  21969793 tgtacgactaggcaaggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatg 21969892  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  21969893 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 21969962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 36344682 - 36344525
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || || |||||||| || || ||||    
T  36344682 cagggtaagcccccacctgatccgttgcctccgaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcgaggggtgtt 36344583  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||||||| |||||||||||||  | |||||||||||    
T  36344582 atgctttgaagtatatcgtgaagaagctcgttgatcagggaaagctgacttttgagaa 36344525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 5005958 - 5006134
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || || |||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  5005958 agggcattgtacaactagacaaggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 5006057  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || || || |||||||||||    
T  5006058 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagttgacttttgagaa 5006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 14098626 - 14098802
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| |   ||||||||| || ||||| | |||||||||  | ||     
T  14098626 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggactgatctcaaatgtgattttcatcaaggtgccttaggt 14098725  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  14098726 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 14098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 24112763 - 24112927
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| ||||| || |||| |||||| ||| | || ||||||||||| || |    
T  24112763 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggt 24112862  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  24112863 gctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 24112927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 27163503 - 27163327
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  27163503 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 27163404  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| |||||||| || || || ||||| ||||||||||| || ||  | |||||||||||    
T  27163403 catgatgtcgaggggtgttatgctttgaaatatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 27163327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 30753839 - 30754015
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  30753839 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 30753938  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  30753939 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 30754015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 40105824 - 40105648
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  40105824 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 40105725  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  40105724 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 40105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 21602 - 21811
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    ||||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||| ||||    
T  21602 gccgagctgctcccgactttgcttctcaaaggacactgcacaaccaggcagggcaagcctccacctaacctgttgcctcccaggttccgttctgacctca 21701  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  21702 agtgcgatttccatcaaggggctctgggccaagatgttgaaggatgttacgctttgaagtagattgtaaagaagctcattgaccagggaaagttaacttt 21801  T
Q  219 tgagaacaat 228  Q
    | ||||||||    
T  21802 taagaacaat 21811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 228
Target Start/End: Original strand, 20439 - 20637
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| |||||    
T  20439 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 20538  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  20539 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaa-ttaacttttgagaacaat 20637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 30529 - 30698
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | |||||| || || || || | |||||||||  | || |||||||    
T  30529 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatg 30628  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  30629 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 30698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 228
Target Start/End: Original strand, 16041375 - 16041574
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| || ||||| |||||    
T  16041375 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctaaagtgtgattt 16041474  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  16041475 ccatcaaggtgctctgggtcatgatgtagaaggatgctacgctttgaagtacattgtgaaaaagctcattgatcagggaaagttaacttttgagaacaat 16041574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 16450089 - 16449894
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | || ||||||| |||||| |||| ||| |||||||| |||||    
T  16450089 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatcctttgcctcccaggtttcgttctgacctcaagtgtgattt 16449990  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16449989 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaacttttgagaa 16449894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 2109096 - 2108898
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  2109096 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 2108997  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  2108996 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 2108898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 26484746 - 26484944
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  26484746 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 26484845  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  26484846 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 26484944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 2775411 - 2775609
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  2775411 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 2775510  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  2775511 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 2775609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 31088555 - 31088360
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  31088555 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 31088456  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  31088455 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 31088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 39211114 - 39210916
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||| ||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  39211114 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcttccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 39211015  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || |||||||||| |||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  39211014 ccatcaaggtgctttgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 39210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 45733523 - 45733707
Alignment:
Q  40 cttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtg 139  Q
    |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| ||||||| ||||||||    
T  45733523 cttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgatttccatcaaggtg 45733622  T
Q  140 ctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  45733623 ctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 45733707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 5128063 - 5128239
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||| ||||| || ||||| ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  5128063 agggcattgtacaaccagacagggtaagcccccacctaatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 5128162  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || ||||| |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  5128163 catgatgtcgagggatgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 5128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 2154644 - 2154820
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || || ||     
T  2154644 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctaggt 2154743  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || ||||| |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  2154744 catgatgtcgagggatgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 2154820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 16518488 - 16518312
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||||| |||||| || |||||     
T  16518488 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggt 16518389  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || | ||||||||| || || ||||||||||||||||| ||||| || |||||||||||    
T  16518388 catgatgtcgaggggtgctatgttttgaagtatatcgtgaagaagctcattgatcaaggaaagttgacttttgagaa 16518312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 4200685 - 4200797
Alignment:
Q  115 ctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaa 214  Q
    ||||| || ||||||| ||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| | || ||||| || |    
T  4200685 ctcaaatgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttga 4200784  T
Q  215 cttttgagaacaa 227  Q
    |||||||||||||    
T  4200785 cttttgagaacaa 4200797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 5147412 - 5147236
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  5147412 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 5147313  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  5147312 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 5147236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 10916940 - 10916764
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  10916940 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 10916841  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  10916840 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 10916764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 16503452 - 16503276
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||||| |||||| || |||||     
T  16503452 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggt 16503353  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || | ||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  16503352 catgatgtcgaggggtgctatgttttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 16503276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 26435328 - 26435504
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  26435328 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 26435427  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  26435428 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 26435504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 31564455 - 31564286
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||| | || |||||||    
T  31564455 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatg 31564356  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  31564355 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 31564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 3445377 - 3445553
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  3445377 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 3445476  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| || ||  | |||||||||||    
T  3445477 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaagctcattgatcaagggaagctgacttttgagaa 3445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 11424848 - 11424672
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| || |||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  11424848 agggcattgcacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 11424749  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  11424748 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 11424672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 228
Target Start/End: Original strand, 18540851 - 18541050
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||||||| ||  |||| || ||||  |||||||| | |||||| ||||| || ||    
T  18540851 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgactt 18540950  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || |||||| ||| | || ||||||||||| || || || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  18540951 ccatcaaggcgctttagggcatgatgttgaggggtgctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 18541050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 26537923 - 26537766
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| |||||||| | |||||||||  | || |||||||| || || ||||    
T  26537923 cagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 26537824  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  26537823 atgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 26537766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 26275166 - 26274990
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  26275166 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 26275067  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || |||||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  26275066 catgatgtcgagggatgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 26274990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 45387414 - 45387590
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  45387414 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 45387513  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  45387514 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 45387590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 4145195 - 4145019
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  4145195 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 4145096  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  4145095 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 4145019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 5159606 - 5159770
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| ||||| || |||| |||||| ||| | || ||||||||| | || |    
T  5159606 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttaaggggt 5159705  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  5159706 gctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 5159770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 11441643 - 11441819
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  11441643 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 11441742  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  11441743 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 11441819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 16736532 - 16736356
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||| ||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  16736532 agggcattgtacaactagacagggcaagcccccacctgatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 16736433  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  16736432 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 16736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 16751586 - 16751410
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||| ||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  16751586 agggcattgtacaactagacagggcaagcccccacctgatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 16751487  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  16751486 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 16751410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 17523603 - 17523779
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||| ||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  17523603 agggcattgtacaactagacagggcaagcccccacctgatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 17523702  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  17523703 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 17523779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 17529612 - 17529436
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||| ||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  17529612 agggcattgtacaactagacagggcaagcccccacctgatccgttacctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 17529513  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  17529512 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 17529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 26319941 - 26319765
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  26319941 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 26319842  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  26319841 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 26319765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 26669986 - 26669810
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | |||||||| |  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  26669986 agggcattgtacaactagacagggtaagcccccacctgatccgttgcccccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 26669887  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  26669886 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 26669810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 26683005 - 26682896
Alignment:
Q  115 ctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaa 214  Q
    ||||| || ||||||| ||||||||||||||| |||||||| |||||||| || ||||||||  ||||| |||| || ||||| || || ||||| || |    
T  26683005 ctcaaatgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattttaaaaaaactcatagaccaaggaaaattga 26682906  T
Q  215 cttttgagaa 224  Q
    | ||||||||    
T  26682905 cctttgagaa 26682896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 31124998 - 31125167
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  31124998 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatg 31125097  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||| ||||| || ||  | |||||||||||    
T  31125098 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcatcgatcaagggaagctgacttttgagaa 31125167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 9618722 - 9618898
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  9618722 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 9618821  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  9618822 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 9618898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 24592606 - 24592437
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || ||||| |    
T  24592606 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacg 24592507  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  24592506 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 24592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 22888542 - 22888729
Alignment:
Q  41 ttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgc 140  Q
    |||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| ||||||| |||||||||    
T  22888542 ttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaaggtgc 22888641  T
Q  141 tctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    |||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  22888642 tctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 22888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 228
Target Start/End: Original strand, 25199089 - 25199288
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | ||||| |||| ||||||||||| |||||||||||| |||||    
T  25199089 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttacctcccaggttccgttctgatctcaagtgtgattt 25199188  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || ||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  25199189 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttaaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 25199288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 23892268 - 23892465
Alignment:
Q  31 ccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttcc 130  Q
    |||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||| |  || ||||| || |||||||    
T  23892268 ccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccggtccgacctcaaatgtgatttcc 23892367  T
Q  131 gtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
     ||||||||||||||| |||||||| ||| |||| || ||| |||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||    
T  23892368 atcaaggtgctctgggtcatgatgtcgaaagatgctatgctctgaagtacatcgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 23892465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 29889173 - 29888985
Alignment:
Q  40 cttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtg 139  Q
    ||||||| |||||| || || ||||| |||||||||||||| ||| | |||||||||| ||||||||| | ||| ||||  || ||||||| ||||||||    
T  29889173 cttctcagagggcactgcaccaccagacagggcaagcctccacctgatccgttgcctcccaggttccggtctgacctcatatgtgatttccatcaaggtg 29889074  T
Q  140 ctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    ||||||| |||||||| |||||||| || |||||||||||||| || ||||||||||||||||| ||||| || |||||||||||||||    
T  29889073 ctctgggtcatgatgtcgaaggatgctatgctttgaagtacatcgtgaagaagctcattgatcaaggaaagttgacttttgagaacaat 29888985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 11325854 - 11326052
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || ||||| || |||||    
T  11325854 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaaatgtgattt 11325953  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  11325954 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 11326052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 33877307 - 33877505
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  33877307 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 33877406  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  33877407 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 33877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 13184750 - 13184555
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  13184750 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 13184651  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  13184650 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 13184555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 13440596 - 13440401
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  13440596 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 13440497  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  13440496 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 13440401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 24688240 - 24688064
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  |||||||| || ||||||| |||||| ||||||||     
T  24688240 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgatctcaaatgtgatttccatcaaggcgctctgggt 24688141  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  24688140 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 24688064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 22999190 - 22999021
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  ||||||||||| ||||| | ||||||||| || || |||||||    
T  22999190 tgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaagtgtgattttcatcaaggtgccctaggtcatgatg 22999091  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  22999090 tcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 22999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 24970097 - 24970258
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||||| |||||| || |||||     
T  24970097 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggt 24970196  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaa 209  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||    
T  24970197 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaa 24970258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 30934719 - 30934888
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  |||||||| || ||||| | |||||| || ||||| |||||||    
T  30934719 tgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatg 30934818  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  30934819 tcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 30934888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 37671547 - 37671386
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  37671547 cagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 37671448  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | ||||||||||| || || |||||||||||||||||||||||  | |||||||||||||||    
T  37671447 atgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaacaat 37671386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 9548626 - 9548450
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | |||||||||||| ||||| | ||||||||| || ||     
T  9548626 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaagtgtgattttcatcaaggtgccctaggt 9548527  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  9548526 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 9548450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 11549433 - 11549609
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  11549433 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 11549532  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  11549533 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 11549609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 13324896 - 13324736
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | ||||||||| || || || | |||||||||| | || |||||||| || || |    
T  13324896 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggt 13324797  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  13324796 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 13324736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 15658843 - 15658667
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  15658843 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 15658744  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  15658743 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 15658667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 18500813 - 18500637
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  18500813 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 18500714  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  18500713 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 18500637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 23718071 - 23717895
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  23718071 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 23717972  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  23717971 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 23717895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 31431519 - 31431695
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  31431519 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 31431618  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || |||||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  31431619 catgatgtcgagggatgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 31431695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 37771051 - 37770890
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  37771051 cagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 37770952  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | ||||||||||| ||  | |||||||||||||||||||||||  | |||||||||||||||    
T  37770951 atgctttgaagtatatcatgaagaagctcattgatcagggaaagctgacttttgagaacaat 37770890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 2511130 - 2511306
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  2511130 agggcattgtacaactagacagggcaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 2511229  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  2511230 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 2511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 8665558 - 8665382
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  8665558 agggcattgtacaactagacagggcaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 8665459  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  8665458 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 8665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 15758940 - 15758764
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  15758940 agggcattgtacaactagacagggcaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 15758841  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  15758840 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 15758764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 23752533 - 23752357
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  || ||||| || ||||| | ||||||||| || ||     
T  23752533 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggtgccctaggt 23752434  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  23752433 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 23752357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 24681535 - 24681695
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  24681535 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 24681634  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  24681635 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 24681695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 24724062 - 24724222
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  24724062 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 24724161  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  24724162 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 24724222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 30168548 - 30168724
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| |||||||| | |||||||||  | ||     
T  30168548 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggt 30168647  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  30168648 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctcacttttgagaa 30168724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 31826490 - 31826314
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  31826490 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 31826391  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| || ||  | |||||||||||    
T  31826390 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaagctcattgatcaagggaagctgacttttgagaa 31826314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 33777566 - 33777742
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  || ||||| || ||||| | |||||| || |||||     
T  33777566 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggcgccctgggt 33777665  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  33777666 catgatgtcgaggggtgctacgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 33777742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 40473616 - 40473456
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  40473616 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 40473517  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  40473516 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 40473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 33516442 - 33516611
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | |||||| || || || || | |||||||||  | || |||||||    
T  33516442 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatg 33516541  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  33516542 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 33516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 28649314 - 28649490
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  28649314 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 28649413  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  28649414 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 28649490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 30152097 - 30152273
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  30152097 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 30152196  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  30152197 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 30152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 33292620 - 33292784
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| ||||| || |||| |||||| ||| | || ||||||||||| || |    
T  33292620 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggt 33292719  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  33292720 gctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 33292784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 43078331 - 43078507
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  43078331 agggcattgtacgactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 43078430  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||| |||||||||||||  | |||||||||||    
T  43078431 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcgttgatcagggaaagctgacttttgagaa 43078507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 37755081 - 37755235
Alignment:
Q  70 ggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacg 169  Q
    |||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||| || || ||||| |    
T  37755081 ggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgttatg 37755180  T
Q  170 ctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  37755181 ctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 37755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 32599536 - 32599379
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || ||||| || || || ||||    
T  32599536 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgcattaggtcatgacgtcgaggggtgtt 32599437  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  32599436 atgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 32599379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 37358719 - 37358550
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  37358719 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatg 37358620  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| ||||| ||||| ||||||||||| || ||  | |||||||||||    
T  37358619 tcgaggggtgttatgctttgaagtatattgtgaagaaactcattgatcaagggaagctgacttttgagaa 37358550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 6874384 - 6874560
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  6874384 agggcattgtacaactagacagggcaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 6874483  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || |||||||| || ||||| || ||  | |||||||||||    
T  6874484 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagcttatcgatcaagggaagctgacttttgagaa 6874560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 9317530 - 9317706
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  9317530 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 9317629  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  9317630 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 9317706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 12132234 - 12132410
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  12132234 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 12132333  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  12132334 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 12132410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 41674788 - 41674964
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || |||    
T  41674788 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcagatctgatctcaaatgtgattttcatcaaggtgccctaggc 41674887  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||||||| || || || ||| | |||||||| || |||||||| || ||||| || ||  | |||||||||||    
T  41674888 catgatgttgaggggtgctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagctgacttttgagaa 41674964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 28959862 - 28959693
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  28959862 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 28959763  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  28959762 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 28959693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 26480471 - 26480647
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  26480471 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 26480570  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  26480571 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 26480647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 29967142 - 29966973
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  |||| ||||| |    
T  29967142 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacg 29967043  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  29967042 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 29966973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 30029501 - 30029670
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  |||| ||||| |    
T  30029501 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacg 30029600  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  30029601 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 30029670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 34616604 - 34616773
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  34616604 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 34616703  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  34616704 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 34616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 18375495 - 18375319
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  18375495 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 18375396  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  18375395 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 18375319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 5637989 - 5638144
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  5637989 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 5638088  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatca 203  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| |||||    
T  5638089 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatca 5638144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 3789639 - 3789796
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||| || || ||||    
T  3789639 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 3789738  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  3789739 atgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 3789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 16208236 - 16208037
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| ||||| || ||||| ||| | |||||||||| ||||||||||| ||| |||||||| |||||    
T  16208236 tcccgactctacttctcagagggcactgcacaaccagacagggaaaacctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 16208137  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  16208136 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 16208037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 20340550 - 20340341
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    ||||||||  |||| ||| | ||||||| |||||| |  |||||||| |||||||||||||| ||| | ||||| ||||  |||||||||| ||| ||||    
T  20340550 gccgagctactcccaactctacttctcagagggcactacacaaccagacagggcaagcctccacctgatccgttacctcctaggttccgttctgacctca 20340451  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||| | || ||||| ||||||||    
T  20340450 agtgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattaaccaaggaaagttaacttt 20340351  T
Q  219 tgagaacaat 228  Q
    ||||||||||    
T  20340350 tgagaacaat 20340341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 20461131 - 20461299
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| |||||    
T  20461131 tcccgactctacttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgattt 20461230  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcat 197  Q
     | |||||||||||| || |||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  20461231 tcatcaaggtgctctaggtcatgatgtcgaaggatgctacgctttgaagtacattgtaaaaaagctcat 20461299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 28151912 - 28152110
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||||||| ||| | | ||| |||| |||| |||| | ||| ||||| || |||||    
T  28151912 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatctgttacctcccaggctccggtctgacctcaaatgtgattt 28152011  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  28152012 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 28152110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 51638287 - 51638463
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || |||||||| ||||| || ||| ||||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  51638287 agggcattgtacgactaggcagggtaagcccccacctgacccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 51638386  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| || ||  | |||||||||||    
T  51638387 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaagctcattgatcaagggaagctgacttttgagaa 51638463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 10962739 - 10962915
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| |||||     
T  10962739 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctgggt 10962838  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  10962839 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 10962915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 28585050 - 28585226
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | |||||||||  ||||     
T  28585050 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccttgggt 28585149  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  28585150 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 28585226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 41793494 - 41793318
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||||||||| ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  41793494 agggcattgtacaactagacagggcaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 41793395  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||| | ||||| || ||  | |||||||||||    
T  41793394 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcgtcgatcaagggaagctgacttttgagaa 41793318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 2103 - 1924
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| ||||||| |||||||||||||||     
T  2103 agggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaaggtgctctgggt 2004  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  2003 catgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcaaggaaa-ttaacttttgagaacaat 1924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 6082 - 6260
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttc-cgtcaaggtgctctggg 146  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || |||||  | |||||||||  | ||    
T  6082 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgatttttcatcaaggtgccttagg 6181  T
Q  147 ccatgatgttgaaggatgttacgcttt-gaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
     |||||||| || || ||||| ||||| |||||| || || |||||||||||||||||||||||  | |||||||||||    
T  6182 tcatgatgtcgaggggtgttatgcttttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 233 - 35
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| ||  ||||||| || ||||||||||| ||| | |||||||||  ||||||||||| ||| |||||||| |||||    
T  233 tcccgactctacttctcagagggcactgctcaaccagacatggcaagcctccacctgatccgttgccttccaggttccgttctgacctcaagtgtgattt 134  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||    
T  133 ccatcaaggtgctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtgaagaagctcattgatcagggaaagttaaccttcgagaacaa 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 27290518 - 27290319
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| |  |||||||| |||||||||||||| ||| | ||||| |||| || |||||||| ||| |||||||| |||||    
T  27290518 tcccgactctacttctcagagggcactacacaaccagacagggcaagcctccacctgatccgttacctcccaagttccgttctgacctcaagtgtgattt 27290419  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    || ||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  27290418 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgcgttgaagtacattgtgaagaagctcattgatcaaggaaagttaacttttgagaacaat 27290319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 22457082 - 22456887
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| | |||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| | | |||||||| |||||    
T  22457082 tcccgactctacttctcataaggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttcttacctcaagtgtgattt 22456983  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| || || ||||| ||||||||||||||    
T  22456982 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttaaagtacattgtgaagaagctcatagaccaaggaaagttaacttttgagaa 22456887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 22477421 - 22477253
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| | |||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| | | |||||||| |||||    
T  22477421 tcccgactctacttctcatatggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctaacctcaagtgtgattt 22477322  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcat 197  Q
    || ||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  22477321 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttaaagtacattgtgaagaagctcat 22477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 13522221 - 13522023
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  13522221 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 13522122  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || ||||||||  ||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  13522121 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaacacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 13522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 33374404 - 33374209
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  33374404 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 33374305  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || |||||||||||    
T  33374304 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacttttgagaa 33374209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 14143433 - 14143235
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| ||  ||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  14143433 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 14143334  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  14143333 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 14143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 26787992 - 26788190
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| ||  ||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  26787992 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 26788091  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  26788092 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 26788190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 27196365 - 27196563
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| ||  ||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  27196365 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 27196464  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  27196465 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 27196563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 27252875 - 27252677
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| ||  ||| ||| ||||| |||||||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  27252875 tcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 27252776  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  27252775 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 27252677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 8892458 - 8892299
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  8892458 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 8892359  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaa 188  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| ||||||||||||    
T  8892358 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa 8892299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 8903693 - 8903534
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  8903693 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 8903594  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaa 188  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| ||||||||||||    
T  8903593 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaa 8903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 28162705 - 28162900
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| | | | || | ||||| || ||||||||  || |||||||| |||||    
T  28162705 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacttgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 28162804  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| | |||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  28162805 ccatcaaggtgctatgggtcatgatgtcggaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 28162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 22935002 - 22934833
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  || ||||| || ||||||| |||||| || ||||| |||||||    
T  22935002 tgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcgccctgggtcatgatg 22934903  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || || ||||||||||||||||| |||||  |||||||||||||    
T  22934902 tcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctaacttttgagaa 22934833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 23857447 - 23857278
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | |||||||||| ||||||| | |  || ||||| || ||||||| |||||| || ||||| |||||||    
T  23857447 tgtacaaccagacagggcaagcccccacctgatccgttgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcgccctgggtcatgatg 23857348  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || || ||||||||||||||||| |||||  |||||||||||||    
T  23857347 tcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctaacttttgagaa 23857278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 4545897 - 4545724
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||| | || |||||||    
T  4545897 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatg 4545798  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||||||    
T  4545797 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaacaat 4545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 26989075 - 26989244
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || ||||| |||||||    
T  26989075 tgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatg 26989174  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || |||||||||||||||||||| |||||  | |||||||||||    
T  26989175 tcgaggggtgctatgctttgaagtatatcgtaaagaagctcattgatcaaggaaagctgacttttgagaa 26989244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 13299080 - 13298904
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  13299080 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 13298981  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || ||||| ||| |||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  13298980 catgacgtcgagggatgctacactttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 13298904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 16749921 - 16750097
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||| || |||||     
T  16749921 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggcgccctgggt 16750020  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  16750021 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 16750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 20160749 - 20160917
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||| ||||| |||| || |||||| || ||||||||||| ||||||||||| ||| | ||||| |||| ||||||| |||  ||||||||||| |||||    
T  20160749 tcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacctgatccgttacctcccaggttctgttccgatctcaagtgtgattt 20160848  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcat 197  Q
    ||  ||||||||  | || |||||||| ||||| || || ||||||||||| ||||| || ||||||||    
T  20160849 ccaccaaggtgccttaggtcatgatgtggaagggtgctatgctttgaagtatattgtgaaaaagctcat 20160917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 22172082 - 22171914
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||| ||||| |||| || |||||| || ||||||||||| ||||||||||| ||| | ||||| |||| ||||||| |||  ||||||||||| |||||    
T  22172082 tcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacctgatccgttacctcccaggttctgttccgatctcaagtgtgattt 22171983  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcat 197  Q
    ||  ||||||||  | || |||||||| ||||| || || ||||||||||| ||||| || ||||||||    
T  22171982 ccaccaaggtgccttaggtcatgatgtggaagggtgctatgctttgaagtatattgtgaaaaagctcat 22171914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 24304747 - 24304571
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | ||||||||| |||||     
T  24304747 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggtgccctgggt 24304648  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || | ||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  24304647 catgatgtcgaggggtgctatgatttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 24304571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 24863784 - 24863960
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  24863784 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 24863883  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  24863884 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 24863960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 26918447 - 26918623
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||| || |||||     
T  26918447 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggcgccctgggt 26918546  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || || ||||| |||||||| |||||  | |||||||||||    
T  26918547 catgatgtcgaggggtgctacgctttgaagtatatcgtgaaaaagcttattgatcaaggaaagctgacttttgagaa 26918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 29549542 - 29549718
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  29549542 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 29549641  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  29549642 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 29549718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 228
Target Start/End: Original strand, 4525363 - 4525533
Alignment:
Q  58 acaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttg 157  Q
    ||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||| ||| || || || | |||||||||  | || |||||||| |    
T  4525363 acaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcccaaatgtgactttcatcaaggtgccttaggtcatgatgtcg 4525462  T
Q  158 aaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||||| ||||||||||| ||||| |||||||||||||||||||||||  | |||||||||||||||    
T  4525463 aggggtgttatgctttgaagtatattgtgaagaagctcattgatcagggaaagctgacttttgagaacaat 4525533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 4757838 - 4758007
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  4757838 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 4757937  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || |||||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  4757938 tcgagggatgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 4758007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 27360114 - 27359945
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  27360114 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 27360015  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || |||||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  27360014 tcgagggatgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27359945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 27450457 - 27450288
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  27450457 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 27450358  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || |||||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  27450357 tcgagggatgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 27450288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 3696148 - 3696324
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| |||||||| | |||||||||  | ||     
T  3696148 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgattttcatcaaggtgccttaggt 3696247  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  3696248 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 3696324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 17025360 - 17025520
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  17025360 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggacatgatgtcgaggggt 17025459  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  17025460 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 17025520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 27000140 - 27000316
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  27000140 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 27000239  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  27000240 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 27000316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 4773092 - 4773249
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||| | || |||||||| || || ||||    
T  4773092 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgctttaggtcatgatgtcgaggggtgtt 4773191  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  4773192 atgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 4773249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 26116520 - 26116363
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||| || || ||||    
T  26116520 cagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 26116421  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  26116420 atgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 26116363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 30558138 - 30557969
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | |||||| || || || || | |||||||||  | || |||||||    
T  30558138 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggtcatgatg 30558039  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  30558038 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 30557969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 4724263 - 4724083
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || || |||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  4724263 agggcattgtacgactagacaaggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 4724164  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    |||||||| || || ||||| ||||||||||| || || ||||| |||||||||||||||||  | |||||||||||||||    
T  4724163 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcagggaaagctgacttttgagaacaat 4724083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 224
Target Start/End: Complemental strand, 34463435 - 34463299
Alignment:
Q  88 ccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaa 187  Q
    ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||| ||||||||||| || || |    
T  34463435 ccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgttatgctttgaagtatatcgtga 34463336  T
Q  188 agaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||||||||||||||||||  | |||||||||||    
T  34463335 agaagctcattgatcagggaaagctgacttttgagaa 34463299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 27007813 - 27007970
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  27007813 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 27007912  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || |||||||||||||| ||||||||  | |||||||||||    
T  27007913 atgctttgaagtatatcgtgaagaagctcattgaccagggaaagctgacttttgagaa 27007970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 27044454 - 27044631
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| ||||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  27044454 agggcattgtacaactagacagggcaagcccccacctgacccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 27044553  T
Q  148 catgatgttgaaggat-gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || | |||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  27044554 catgatgtcgaggggtggttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 27044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 15424446 - 15424270
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| ||  ||||     
T  15424446 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccttgggt 15424347  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  15424346 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 15424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 27272709 - 27272554
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||| ||||| || ||| | |||| ||||| ||||||| | |  || ||||| || ||||||| |||||| ||||||||     
T  27272709 agggcattgtacaaccagacagggtaagcccccacctgatccgtcgcctcccaggttcaggtccgacctcaaatgtgatttccatcaaggcgctctgggt 27272610  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatca 203  Q
    |||||||| || || || || ||||||||||| || || || |||||||| |||||    
T  27272609 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcatcgatca 27272554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 16674225 - 16674382
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  16674225 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 16674324  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  16674325 atgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 16674382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 26777737 - 26777568
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  26777737 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 26777638  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  26777637 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 26777568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 27485203 - 27485372
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  27485203 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatg 27485302  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  27485303 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 27485372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 29501489 - 29501658
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  29501489 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 29501588  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  29501589 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 29501658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 28207521 - 28207697
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || || |||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  28207521 agggcattgtacgactagacaaggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttagga 28207620  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||| ||||||||||| || ||  | |||||||||||    
T  28207621 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaaactcattgatcaagggaagctgacttttgagaa 28207697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 29573096 - 29573256
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    |||||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || || |||||||| || || |    
T  29573096 aggcagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggtcatgatgtcgaggggt 29573195  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  29573196 gttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 29573256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 16944149 - 16943980
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  |||| ||||| |    
T  16944149 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttgggtcatgacg 16944050  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  16944049 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 16943980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 18530411 - 18530595
Alignment:
Q  40 cttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtg 139  Q
    ||||||| |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| ||||||| ||||||||    
T  18530411 cttctcagagggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaaggtg 18530510  T
Q  140 ctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| || || ||||| || || ||||||||    
T  18530511 ctctgggtcatgatgttgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 18530595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 16626733 - 16626557
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| || |||||||| |||||||||||||| ||| | |||||||||| ||||||||||| ||| |||||||| ||||||| |||||||||||||||     
T  16626733 agggcactgcacaaccagacagggcaagcctccacctgatccgttgcctcccaggttccgttctgacctcaagtgtgatttccatcaaggtgctctgggt 16626634  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| || || ||||| || || ||||||||    
T  16626633 catgatgttgaaggatgctacgctttgaagtacattgtaaaaaagctcatagaccaaggaaaattgacctttgagaa 16626557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 5652399 - 5652594
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | || ||||||||||| || |||||||| |||||||||||| | ||| |||||| ||||| || ||||||||  || |||||||| |||||    
T  5652399 tcccgactctactcctcaaagggcactgcacaaccagacagggcaagccttcacctgacccgtcgcctcccaagttccgttcggacctcaagtgtgattt 5652498  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  5652499 ccatcaaggtgctctgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 5652594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 31034363 - 31034165
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| |||||||| ||| | ||||| ||||  |||||||| | ||| ||||| || |||||    
T  31034363 tcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccacctgatccgttacctcctaggttccggtctgacctcaaatgtgattt 31034264  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  31034263 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 31034165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 32292764 - 32292962
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | ||||||| |||||| || |||| ||| ||||| ||| |||| ||| | ||||| |||| ||||||||| | ||| ||||| || |||||    
T  32292764 tcccgactctacttctcagagggcactgcacaatcagacaggggaagtctccacctgatccgttacctcccaggttccggtctgacctcaaatgtgattt 32292863  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    || ||||||||||||||| |||||||| |||||||| || |||||||| |||||||| |||||||||||| | || ||||| || ||||||||||||||    
T  32292864 ccatcaaggtgctctgggtcatgatgtcgaaggatgctatgctttgaaatacattgtgaagaagctcattaaccaaggaaagttgacttttgagaacaa 32292962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 4625956 - 4626151
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || |||||||| |||||    
T  4625956 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaagtgtgattt 4626055  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  4626056 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 4626151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 17994030 - 17993835
Alignment:
Q  29 tcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgattt 128  Q
    |||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| | || | ||||| || ||||||||  || ||||| || |||||    
T  17994030 tcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccacctgatccatcgcctcccaagttccgttcggacctcaaatgtgattt 17993931  T
Q  129 ccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || |||||||||| |||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| || || ||||| || || ||||||||    
T  17993930 ccatcaaggtgctatgggtcatgatgtcgaaggatgctacgcgttgaggtacattgtaaaaaaactcatagaccaaggaaaattgacctttgagaa 17993835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 224
Target Start/End: Original strand, 8295986 - 8296179
Alignment:
Q  31 ccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttcc 130  Q
    |||||||| || | || |||||| ||||||||||| ||||||||||| |  ||| | | |||||||| ||||||| | |  |||||||| || ||||| |    
T  8295986 ccgactttactccacagagggcattgtacaaccagacagggcaagcccctacctgatctgttgcctcccaggttcaggtccgatctcaaatgtgattttc 8296085  T
Q  131 gtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
     ||||||||| ||||| |||||||| || || || || ||||||||||| || || ||||||||||||||||| ||||| || |||||||||||    
T  8296086 atcaaggtgccctgggtcatgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagttgacttttgagaa 8296179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 8301494 - 8301318
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||||| |||||| || |||||     
T  8301494 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggt 8301395  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  8301394 catgatgtagaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 8301318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 15741321 - 15741145
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| |  |||||||||  |||||| | |  |||||||| || ||||| | |||||| ||||||||     
T  15741321 agggcattgtacaaccagacagggcaagcccccacctgattcgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgctctgggt 15741222  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || ||||| || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  15741221 catgatgtcgagggatgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 15741145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 15892933 - 15892757
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | || ||||||| ||||||| | |  |||||||| || ||||||| |||||| || |||||     
T  15892933 agggcattgtacaaccagacagggcaagcccccacctgatcctttgcctcccaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggt 15892834  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  15892833 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 15892757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 18330700 - 18330876
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  18330700 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 18330799  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  18330800 catgatgtcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 18330876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 22387805 - 22387629
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||| || |||||     
T  22387805 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggcgccctgggt 22387706  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  22387705 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 22387629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 7073243 - 7073419
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || || || ||||| |||||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  7073243 agggcattgtacgactagacaaggtaagcccccgcctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 7073342  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||  |||||||||||||    
T  7073343 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctaacttttgagaa 7073419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 18277279 - 18277103
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | | ||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  18277279 agggcattgtacaactagacagggcaagcccccacctgatcagttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 18277180  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  18277179 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 18277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 18292580 - 18292404
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | | ||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  18292580 agggcattgtacaactagacagggcaagcccccacctgatcagttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 18292481  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  18292480 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 18292404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 18307881 - 18307705
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | | ||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  18307881 agggcattgtacaactagacagggcaagcccccacctgatcagttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 18307782  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  18307781 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 18307705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 22871083 - 22870907
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || |||||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  22871083 agggcattgtacgactaggcagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 22870984  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  22870983 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 22870907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 22886142 - 22885966
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || |||||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  22886142 agggcattgtacgactaggcagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 22886043  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  22886042 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 22885966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 29148982 - 29148806
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || ||     
T  29148982 agggcattgtacaactagacagggcaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggt 29148883  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  29148882 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 29148806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 29665181 - 29665021
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||| | || |||||||| || || |    
T  29665181 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgctttaggtcatgatgtcgaggggt 29665082  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  29665081 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 29665021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 228
Target Start/End: Complemental strand, 6542679 - 6542509
Alignment:
Q  58 acaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttg 157  Q
    ||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||| |    
T  6542679 acaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatgtcg 6542580  T
Q  158 aaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||||||    
T  6542579 aggggtgttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaacaat 6542509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 11110557 - 11110400
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| |||||||| ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  11110557 cagggtaagcctccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 11110458  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  11110457 atgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 11110400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 18051300 - 18051469
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | ||| |||||| ||||||| | |  |||||||| || ||||||  |||||| || ||||| |||||||    
T  18051300 tgtacaaccagacagggcaagcccccacctgatccgctgcctcccaggttcaggtccgatctcaaatgtgatttctatcaaggcgccctgggtcatgatg 18051399  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  18051400 tcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 18051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 28116181 - 28116020
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || | | | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||| | ||     
T  28116181 agggcattgtacaactagacagggcaagcccccacttgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgctttaggt 28116082  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaa 209  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| |||||    
T  28116081 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaaggaaa 28116020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 4416950 - 4417126
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || |||||||| || || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||| |||||  | ||     
T  4416950 agggcattgtacaactagacagggcaaacccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcagggtgccttaggt 4417049  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| |||||  | |||||||||||    
T  4417050 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaagctcattgatcaaggaaagctgacttttgagaa 4417126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 4796880 - 4796704
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  4796880 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 4796781  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  4796780 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 4796704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 20577058 - 20576898
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| || || ||||| | |||||||||  | || |||||||| || || |    
T  20577058 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggt 20576959  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||| ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  20576958 gttatgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 20576898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 36997304 - 36997128
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  36997304 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 36997205  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| || ||  | |||||||||||    
T  36997204 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaagctcattgatcaagggaagctgacttttgagaa 36997128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 51782054 - 51782230
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  51782054 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 51782153  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| |||||||||||  | |||||||||||    
T  51782154 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcagggaaagctgacttttgagaa 51782230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 4346895 - 4346738
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  4346895 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 4346796  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || |||||||||||||||||||||||  | |||||||||||    
T  4346795 atgctttgaagtatatcgtgaagaagctcattgatcagggaaagctgacttttgagaa 4346738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 51797143 - 51797320
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctca-ggttccgttttgatctcaagtgcgatttccgtcaaggtgctctggg 146  Q
    |||||| |||||||| || ||||||||||| || ||| | |||||||||| || ||||| | | ||||||||| || || || | |||||||||  | ||    
T  51797143 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctcacaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttagg 51797242  T
Q  147 ccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
     |||||||| || || ||||| ||||||||||| || || ||||||||||| |||||||||||  | |||||||||||    
T  51797243 tcatgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcagggaaagctgacttttgagaa 51797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 5013743 - 5013919
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  5013743 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 5013842  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  5013843 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 5013919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 5467016 - 5467192
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  5467016 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 5467115  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  5467116 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaaactgacttttgagaa 5467192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 5609549 - 5609373
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  5609549 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 5609450  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || ||||| ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  5609449 catgacgtcgaagggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 5609373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 8211769 - 8211945
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || |||||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  8211769 agggcattgtacgactaggcagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 8211868  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  8211869 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 8211945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 21674724 - 21674900
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  21674724 agggcattgtacgactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 21674823  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  21674824 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 21674900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 28339333 - 28339509
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||| | ||     
T  28339333 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgctttaggt 28339432  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  28339433 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 28339509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 32439201 - 32439365
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||  |||| || ||||  |||||||| | |||||| ||||| || |||| |||||| ||| | || ||||||||||| || |    
T  32439201 aggcagggcaagcctccaccggaccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggt 32439300  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  32439301 gctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 32439365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 47023484 - 47023660
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  47023484 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 47023583  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  47023584 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 47023660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 5713258 - 5713437
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  5713258 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 5713357  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | ||||||||||||||    
T  5713358 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaacaa 5713437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 227
Target Start/End: Original strand, 5724168 - 5724347
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  5724168 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 5724267  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | ||||||||||||||    
T  5724268 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaacaa 5724347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 227
Target Start/End: Complemental strand, 5757309 - 5757130
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  5757309 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 5757210  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | ||||||||||||||    
T  5757209 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaacaa 5757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 227
Target Start/End: Complemental strand, 5768200 - 5768021
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  5768200 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 5768101  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaa 227  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | ||||||||||||||    
T  5768100 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaacaa 5768021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 203
Target Start/End: Original strand, 10396174 - 10396319
Alignment:
Q  58 acaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttg 157  Q
    ||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | ||||||||| || || |||||||| |    
T  10396174 acaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccctaggtcatgatgtcg 10396273  T
Q  158 aaggatgttacgctttgaagtacattgtaaagaagctcattgatca 203  Q
    | || ||||| ||||||||||| || || |||||||||||||||||    
T  10396274 aggggtgttatgctttgaagtatatcgtgaagaagctcattgatca 10396319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 224
Target Start/End: Original strand, 48465977 - 48466134
Alignment:
Q  67 cagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgtt 166  Q
    ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | || |||||||| || || ||||    
T  48465977 cagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggtcatgatgtcgaggggtgtt 48466076  T
Q  167 acgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  48466077 atgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 48466134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 6192347 - 6192523
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | | | ||||||  |||||| | |  || ||||| || ||||| | ||||||||| || ||     
T  6192347 agggcattgtacaaccagacagggcaagcccccacctgatctgctgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggtgccctaggt 6192446  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  6192447 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 6192523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 7996593 - 7996769
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  7996593 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 7996692  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| |||||||| || || || ||||||||||| ||||| || ||  | |||||||||||    
T  7996693 catgatgtcgaggggtgttatgctttgaaatatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 7996769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 10643101 - 10643277
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  10643101 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 10643200  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| |||||||| || || || ||||||||||| ||||| || ||  | |||||||||||    
T  10643201 catgatgtcgaggggtgttatgctttgaaatatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 10643277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 20066090 - 20066254
Alignment:
Q  64 aggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatgttgaaggat 163  Q
    ||||||||||||||||| ||   ||| || ||||  |||||||| | |||||| ||||| || |||| |||||| ||| | || ||||||||||| || |    
T  20066090 aggcagggcaagcctccaccgggccctttacctccaaggttccgctctgatcttaagtgtgacttccatcaaggcgctttagggcatgatgttgaggggt 20066189  T
Q  164 gttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaacaat 228  Q
    | || ||| | |||||||| || |||||||| || ||||| || || ||||||||||||||||||    
T  20066190 gctatgctctaaagtacatcgtcaagaagcttatagatcaagggaagttaacttttgagaacaat 20066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 31964700 - 31964524
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  31964700 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 31964601  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  31964600 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 31964524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 50134298 - 50134122
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  50134298 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 50134199  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  50134198 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 50134122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 5596577 - 5596408
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  5596577 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgatg 5596478  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  5596477 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 5596408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 18242777 - 18242946
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || |||||||    
T  18242777 tgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggacatgatg 18242876  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||| ||||||||||| || ||  | |||||||||||    
T  18242877 tcgaggggtgttatgctttgaagtatatcgtgaagaaactcattgatcaagggaagctgacttttgagaa 18242946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 24328197 - 24328366
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || || |||||||    
T  24328197 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggtcatgatg 24328296  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| |||||||| || || || ||||||||||| ||||| || ||  | |||||||||||    
T  24328297 tcgaggggtgttatgctttgaaatatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 24328366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 17985183 - 17985007
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | |||||| || || || || | |||||||||  | ||     
T  17985183 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatcttaaatgtgactttcatcaaggtgccttaggt 17985084  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || |||||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  17985083 catgacgtcgagggatgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 17985007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 28021306 - 28021482
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | || || ||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  28021306 agggcattgtacaactagacagggcaagccaccacctgatccattacctccaaggttcaggtctgatctcaaatgtgattttcatcaaggtgccttaggt 28021405  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
     ||||||| || || ||||| ||||||||||| || || ||||||||||||||||| || ||  | |||||||||||    
T  28021406 tatgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcattgatcaagggaagctgacttttgagaa 28021482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 35880797 - 35880973
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||  ||||||||||| || ||| | ||| ||||||  |||||| | |  |||||||| || ||||| | |||||| || || ||     
T  35880797 agggcattgtacaaccaaacagggcaagcccccacctgatccgctgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctaggt 35880896  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || || |||||||||||||| |||||  | |||||||||||    
T  35880897 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaaaagctcattgatcaaggaaagctgacttttgagaa 35880973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 4721662 - 4721823
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||| ||||||  |||||| | |  || ||||| || ||||| | |||||| || |||||     
T  4721662 agggcattgtacaaccagacagggcaagcccccacctgatccgctgcctccaaggttcaggtccgacctcaaatgtgattttcatcaaggcgccctgggt 4721761  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaa 209  Q
    |||||||| || || || ||| |||||||||| || || || || ||||||||||| |||||    
T  4721762 catgatgtcgaggggtgctacactttgaagtatatcgtgaaaaatctcattgatcaaggaaa 4721823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 18225229 - 18225398
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | || ||||| |    
T  18225229 tgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggtcatgacg 18225328  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  18225329 tcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 18225398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 2873 - 2664
Alignment:
Q  19 gccgagctgatcccgactttgcttctcaaagggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctca 118  Q
    ||||||||  |||| ||| | ||||||| |||||| |  |||||||| |||||||||||||| ||| | ||||| ||||  |||||||||| ||| ||||    
T  2873 gccgagctactcccaactctacttctcagagggcactacacaaccagacagggcaagcctccacctgatccgttacctcctaggttccgttctgacctca 2774  T
Q  119 agtgcgatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttt 218  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||| | || ||||| ||||||||    
T  2773 agtgtgatttccatcaaggtgctctgggtcatgatgtcgaaggatgctacgctttgaagtacattgtgaagaagctcattaaccaaggaaagttaacttt 2674  T
Q  219 tgagaacaat 228  Q
    ||||||||||    
T  2673 tgagaacaat 2664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 728 - 628
Alignment:
Q  124 gatttccgtcaaggtgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgaga 223  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  728 gatttccatcaagatgctctgggccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaagttaacttttgaga 629  T
Q  224 a 224  Q
    |    
T  628 a 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 47164 - 46995
Alignment:
Q  55 tgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggccatgatg 154  Q
    ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || ||||| |||||||    
T  47164 tgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggtcatgatg 47065  T
Q  155 ttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    | || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  47064 tcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 46995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 40255 - 40079
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | |||||||| | ||||||| | |  |||||||| || ||||||| |||||| || |||||     
T  40255 agggcattgtacaaccagacagggcaagcccccacctgatccgttgccccccaggttcaggtccgatctcaaatgtgatttccatcaaggcgccctgggt 40156  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || ||| ||||||||||||| |||||  | |||||||||||    
T  40155 catgatgtcgaggggtgctatgctttgaagtatatcgtgaaggagctcattgatcaaggaaagctgacttttgagaa 40079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 29833 - 30009
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || |||||||  ||||| || |||||     
T  29833 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgatttccaccaaggcgccctgggt 29932  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    || ||||| || || || || ||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  29933 cacgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 30009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 9636 - 9812
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| || ||||| | |||||||||  | ||     
T  9636 agggcattgtacgactagacagggcaagcccccacctgatccgttgcctccaaggttcagatctgatctcaaatgtgattttcatcaaggtgccttaggt 9735  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| || ||  | |||||||||||    
T  9736 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaagctcattgatcaagggaagctgacttttgagaa 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 9252 - 9076
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  9252 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 9153  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  9152 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 9076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 20085 - 20261
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||||||||| || ||| | ||||||||||  |||||| | | ||||||||| ||||| || | ||||||||| || ||     
T  20085 agggcattgtacaactagacagggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgcgactttcatcaaggtgccctaggt 20184  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  20185 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 20261  T

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Target: scaffold0143 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 27362 - 27538
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||| | ||||||||||  |||||| | |  |||||||| || ||||| | |||||| || |||||     
T  27362 agggcattgtacaaccagacagggcaagcccccacctgatccgttgcctccaaggttcaggtccgatctcaaatgtgattttcatcaaggcgccctgggt 27461  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || || ||||||||||| || || |||||||| |||||||| |||||  | |||||||||||    
T  27462 catgatgtcgaggggtgctatgctttgaagtatatcgtgaagaagcttattgatcaaggaaagctgacttttgagaa 27538  T

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Target: scaffold0029 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 315 - 139
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||||||||| ||||||||||| || ||  | |||||||||| || |||| | |  |||||||| || ||||| | |||||| ||  ||||     
T  315 agggcattgtacaaccagacagggcaagcccccaccggatccgttgcctcccaagttcaggtccgatctcaaatgtgattttcatcaaggcgcgttgggt 216  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || || |||||||||||||| || || ||||||||||||||||| |||||  | |||||||||||    
T  215 catgatgtcgaggggtgctacgctttgaagtatatcgtgaagaagctcattgatcaaggaaagctgacttttgagaa 139  T

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Target: scaffold0350 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 7425 - 7249
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | ||||||||| || ||     
T  7425 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctaggt 7326  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  7325 catgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 7249  T

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Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 8019 - 8195
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| ||||| || || || |||||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  8019 agggcattgtacgactagacaaggcaagccaccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttagga 8118  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    |||||||| || || ||||| ||||||||||| ||||| ||||| ||||||||||| || ||  | |||||||||||    
T  8119 catgatgtcgaggggtgttatgctttgaagtatattgtgaagaaactcattgatcaagggaagctgacttttgagaa 8195  T

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Target: scaffold0144 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 26388 - 26211
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctca-ggttccgttttgatctcaagtgcgatttccgtcaaggtgctctggg 146  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  | ||||| | | ||||||||| || || || | ||||||||| || ||    
T  26388 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccctagg 26289  T
Q  147 ccatgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
     |||||||| || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  26288 tcatgatgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 26211  T

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Target: scaffold0237 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 15116 - 14940
Alignment:
Q  48 agggcaatgtacaaccaggcagggcaagcctccgcctaacccgttgcctctcaggttccgttttgatctcaagtgcgatttccgtcaaggtgctctgggc 147  Q
    |||||| |||||||| || ||||| ||||| || ||| | ||||||||||  |||||| | | ||||||||| || || || | |||||||||  | ||     
T  15116 agggcattgtacaactagacagggtaagcccccacctgatccgttgcctccaaggttcaggtctgatctcaaatgtgactttcatcaaggtgccttaggt 15017  T
Q  148 catgatgttgaaggatgttacgctttgaagtacattgtaaagaagctcattgatcagggaaatttaacttttgagaa 224  Q
    ||||| || || || ||||| ||||||||||| || || ||||||||||| ||||| || ||  | |||||||||||    
T  15016 catgacgtcgaggggtgttatgctttgaagtatatcgtgaagaagctcatcgatcaagggaagctgacttttgagaa 14940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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