View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6697_low_17 (Length: 245)

Name: NF6697_low_17
Description: NF6697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6697_low_17
NF6697_low_17
[»] scaffold0108 (1 HSPs)
scaffold0108 (16-244)||(50152-50380)
[»] chr3 (61 HSPs)
chr3 (16-244)||(16825533-16825763)
chr3 (27-244)||(35982839-35983056)
chr3 (17-244)||(12180992-12181219)
chr3 (17-228)||(17494295-17494506)
chr3 (16-173)||(14290857-14291014)
chr3 (17-244)||(12357781-12358008)
chr3 (22-240)||(11958439-11958657)
chr3 (22-240)||(16326967-16327185)
chr3 (20-201)||(12857793-12857973)
chr3 (17-244)||(11949179-11949406)
chr3 (17-224)||(31692459-31692666)
chr3 (17-204)||(31941551-31941738)
chr3 (17-237)||(10408616-10408836)
chr3 (17-237)||(47126592-47126812)
chr3 (22-213)||(16831813-16832004)
chr3 (22-192)||(17189027-17189197)
chr3 (17-242)||(18131603-18131827)
chr3 (17-237)||(28756967-28757187)
chr3 (22-168)||(13317864-13318010)
chr3 (17-114)||(12509867-12509964)
chr3 (16-173)||(15230250-15230407)
chr3 (16-173)||(15236118-15236275)
chr3 (22-102)||(24189957-24190037)
chr3 (22-99)||(8744789-8744866)
chr3 (22-99)||(13944677-13944754)
chr3 (22-103)||(10417440-10417521)
chr3 (22-102)||(16378330-16378410)
chr3 (17-78)||(12272986-12273047)
chr3 (22-99)||(3688586-3688663)
chr3 (22-99)||(10008243-10008320)
chr3 (22-99)||(10908853-10908930)
chr3 (22-99)||(12889352-12889429)
chr3 (22-99)||(13255333-13255410)
chr3 (22-99)||(15345655-15345732)
chr3 (22-99)||(15358726-15358803)
chr3 (22-99)||(15586802-15586879)
chr3 (22-99)||(15713466-15713543)
chr3 (22-99)||(24185833-24185910)
chr3 (22-99)||(43165318-43165395)
chr3 (22-99)||(48428090-48428167)
chr3 (16-99)||(16638410-16638493)
chr3 (24-99)||(26790823-26790898)
chr3 (22-80)||(5422359-5422417)
chr3 (22-99)||(6603378-6603455)
chr3 (38-99)||(11861033-11861094)
chr3 (22-99)||(15399927-15400004)
chr3 (22-99)||(16754111-16754188)
chr3 (22-99)||(16804357-16804434)
chr3 (22-99)||(20059464-20059541)
chr3 (22-99)||(53382428-53382505)
chr3 (24-152)||(15013115-15013243)
chr3 (16-99)||(12843513-12843596)
chr3 (16-99)||(15262267-15262350)
chr3 (22-80)||(15065714-15065772)
chr3 (22-99)||(23079427-23079504)
chr3 (22-80)||(14873997-14874055)
chr3 (22-99)||(16694807-16694884)
chr3 (33-78)||(8271830-8271875)
chr3 (133-214)||(13028640-13028721)
chr3 (33-78)||(13964786-13964831)
chr3 (33-78)||(30150021-30150066)
[»] scaffold0309 (1 HSPs)
scaffold0309 (16-244)||(12774-13002)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-244)||(63548-63776)
[»] scaffold0046 (2 HSPs)
scaffold0046 (16-244)||(70155-70383)
scaffold0046 (16-87)||(60786-60857)
[»] scaffold0335 (1 HSPs)
scaffold0335 (16-244)||(4333-4561)
[»] scaffold0106 (1 HSPs)
scaffold0106 (17-245)||(34385-34613)
[»] chr7 (46 HSPs)
chr7 (16-244)||(15099616-15099844)
chr7 (16-244)||(12798514-12798742)
chr7 (16-244)||(14261259-14261487)
chr7 (16-244)||(19150019-19150247)
chr7 (16-244)||(20749418-20749646)
chr7 (22-240)||(13024359-13024576)
chr7 (17-240)||(16947489-16947712)
chr7 (17-244)||(13676460-13676687)
chr7 (17-237)||(26091818-26092038)
chr7 (17-237)||(49155310-49155530)
chr7 (17-237)||(40924837-40925057)
chr7 (17-237)||(13965688-13965908)
chr7 (17-240)||(12459637-12459860)
chr7 (17-240)||(21755421-21755644)
chr7 (22-174)||(14140693-14140845)
chr7 (22-168)||(11385518-11385664)
chr7 (17-174)||(14283457-14283614)
chr7 (22-102)||(15343445-15343525)
chr7 (16-173)||(12203884-12204041)
chr7 (22-99)||(18051111-18051188)
chr7 (17-153)||(26115694-26115830)
chr7 (16-144)||(15627531-15627659)
chr7 (16-99)||(11550282-11550365)
chr7 (22-99)||(8710618-8710695)
chr7 (22-99)||(13689054-13689131)
chr7 (22-99)||(14335409-14335486)
chr7 (22-99)||(14957567-14957644)
chr7 (22-99)||(44788531-44788608)
chr7 (22-99)||(9591377-9591454)
chr7 (22-99)||(11234393-11234470)
chr7 (22-99)||(15158237-15158314)
chr7 (22-99)||(17703635-17703712)
chr7 (22-99)||(18587351-18587428)
chr7 (22-99)||(16726621-16726698)
chr7 (22-99)||(18180756-18180833)
chr7 (16-99)||(14042702-14042785)
chr7 (16-99)||(14352732-14352815)
chr7 (22-99)||(12690515-12690591)
chr7 (16-69)||(15146133-15146186)
chr7 (16-95)||(38330-38409)
chr7 (33-78)||(4442951-4442996)
chr7 (33-78)||(7826924-7826969)
chr7 (33-78)||(13459057-13459102)
chr7 (33-78)||(27104975-27105020)
chr7 (33-78)||(27173305-27173350)
chr7 (75-103)||(12712817-12712845)
[»] scaffold0751 (1 HSPs)
scaffold0751 (16-244)||(5228-5456)
[»] chr4 (40 HSPs)
chr4 (16-224)||(14993413-14993621)
chr4 (16-244)||(15266794-15267022)
chr4 (16-201)||(15073377-15073562)
chr4 (22-237)||(20893055-20893270)
chr4 (17-237)||(3261827-3262047)
chr4 (17-237)||(11204265-11204485)
chr4 (17-237)||(29450570-29450790)
chr4 (17-114)||(44659022-44659119)
chr4 (17-237)||(7357286-7357506)
chr4 (17-103)||(16150655-16150741)
chr4 (17-103)||(16154801-16154887)
chr4 (22-103)||(27903409-27903490)
chr4 (22-99)||(51603963-51604040)
chr4 (22-99)||(53750641-53750718)
chr4 (16-144)||(14697119-14697247)
chr4 (22-99)||(8050534-8050611)
chr4 (22-99)||(8389436-8389513)
chr4 (22-99)||(12479624-12479701)
chr4 (22-99)||(14300890-14300967)
chr4 (22-99)||(14683591-14683668)
chr4 (22-99)||(16233903-16233980)
chr4 (22-99)||(17092060-17092137)
chr4 (22-99)||(19635160-19635237)
chr4 (22-99)||(19775704-19775781)
chr4 (22-99)||(23958771-23958848)
chr4 (22-99)||(27714360-27714437)
chr4 (186-244)||(18259629-18259687)
chr4 (22-99)||(13513374-13513451)
chr4 (55-112)||(15354234-15354291)
chr4 (22-99)||(16350465-16350542)
chr4 (22-99)||(40476064-40476141)
chr4 (16-99)||(15946-16029)
chr4 (16-99)||(14162488-14162571)
chr4 (22-80)||(18224376-18224434)
chr4 (32-96)||(18604733-18604797)
chr4 (24-77)||(15144825-15144878)
chr4 (16-99)||(16219206-16219289)
chr4 (16-99)||(16222526-16222609)
chr4 (16-95)||(18546794-18546873)
chr4 (33-78)||(14999681-14999726)
[»] chr1 (36 HSPs)
chr1 (16-245)||(21739133-21739362)
chr1 (16-244)||(21742650-21742878)
chr1 (16-244)||(22015843-22016071)
chr1 (17-240)||(24096717-24096940)
chr1 (24-244)||(19857346-19857566)
chr1 (17-237)||(48425938-48426158)
chr1 (17-240)||(52988806-52989029)
chr1 (17-237)||(20074814-20075034)
chr1 (24-224)||(20833018-20833218)
chr1 (17-237)||(38909931-38910151)
chr1 (17-237)||(31537102-31537322)
chr1 (17-153)||(37680114-37680250)
chr1 (17-103)||(18710450-18710536)
chr1 (17-114)||(20297446-20297543)
chr1 (22-103)||(20853999-20854080)
chr1 (60-240)||(21961135-21961315)
chr1 (22-99)||(16347838-16347915)
chr1 (22-99)||(17042258-17042335)
chr1 (22-99)||(51330735-51330812)
chr1 (16-144)||(16379127-16379255)
chr1 (16-99)||(21842245-21842328)
chr1 (29-99)||(21833348-21833418)
chr1 (22-80)||(33388291-33388349)
chr1 (22-99)||(22496499-22496576)
chr1 (22-99)||(24785100-24785177)
chr1 (22-99)||(41350911-41350988)
chr1 (16-99)||(21752080-21752163)
chr1 (38-144)||(21045322-21045428)
chr1 (22-99)||(20081619-20081696)
chr1 (22-99)||(21228799-21228876)
chr1 (22-99)||(22401631-22401708)
chr1 (23-99)||(19109408-19109484)
chr1 (134-237)||(20297565-20297668)
chr1 (44-99)||(22435976-22436031)
chr1 (33-78)||(20828656-20828701)
chr1 (33-78)||(20928104-20928149)
[»] scaffold0165 (1 HSPs)
scaffold0165 (16-244)||(12007-12235)
[»] scaffold0067 (4 HSPs)
scaffold0067 (16-244)||(29671-29899)
scaffold0067 (22-102)||(64773-64853)
scaffold0067 (22-102)||(49351-49431)
scaffold0067 (22-102)||(58385-58465)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-244)||(912-1140)
[»] scaffold1032 (1 HSPs)
scaffold1032 (16-244)||(844-1072)
[»] scaffold0156 (1 HSPs)
scaffold0156 (16-244)||(36986-37214)
[»] scaffold0102 (2 HSPs)
scaffold0102 (24-243)||(42753-42972)
scaffold0102 (22-99)||(50519-50596)
[»] chr5 (41 HSPs)
chr5 (23-240)||(23078117-23078334)
chr5 (17-228)||(23563392-23563603)
chr5 (17-237)||(20345215-20345435)
chr5 (16-206)||(21561271-21561461)
chr5 (16-206)||(21983423-21983613)
chr5 (17-240)||(22505612-22505835)
chr5 (17-237)||(14884206-14884426)
chr5 (22-201)||(20824391-20824570)
chr5 (17-237)||(25851005-25851225)
chr5 (22-103)||(20778851-20778932)
chr5 (22-103)||(22464888-22464969)
chr5 (22-99)||(17266687-17266764)
chr5 (22-103)||(28892291-28892372)
chr5 (16-214)||(21631637-21631835)
chr5 (133-206)||(43122516-43122589)
chr5 (16-99)||(14997092-14997175)
chr5 (22-99)||(16359458-16359535)
chr5 (22-99)||(19772916-19772993)
chr5 (16-149)||(21410084-21410217)
chr5 (22-99)||(22330240-22330317)
chr5 (22-99)||(27521362-27521439)
chr5 (22-99)||(27613312-27613389)
chr5 (22-99)||(27665843-27665920)
chr5 (22-99)||(27682753-27682830)
chr5 (22-99)||(29473426-29473503)
chr5 (22-99)||(34569450-34569527)
chr5 (22-99)||(37288849-37288926)
chr5 (22-99)||(40711736-40711813)
chr5 (22-99)||(41773798-41773875)
chr5 (16-99)||(25429371-25429454)
chr5 (22-99)||(18782070-18782147)
chr5 (22-99)||(21882730-21882807)
chr5 (22-99)||(23526007-23526084)
chr5 (16-99)||(21332339-21332422)
chr5 (16-99)||(26736080-26736163)
chr5 (22-80)||(20803553-20803611)
chr5 (22-99)||(22350875-22350952)
chr5 (22-99)||(22137624-22137701)
chr5 (38-99)||(23460943-23461004)
chr5 (33-78)||(23508633-23508678)
chr5 (33-78)||(24584159-24584204)
[»] scaffold0104 (1 HSPs)
scaffold0104 (16-244)||(43448-43676)
[»] chr6 (39 HSPs)
chr6 (17-244)||(19455906-19456133)
chr6 (17-244)||(19466051-19466278)
chr6 (16-171)||(21474482-21474637)
chr6 (22-244)||(18797578-18797800)
chr6 (17-195)||(19437885-19438063)
chr6 (16-206)||(19486503-19486693)
chr6 (24-224)||(24515605-24515805)
chr6 (17-240)||(10466023-10466246)
chr6 (16-171)||(25770726-25770881)
chr6 (22-244)||(34642757-34642979)
chr6 (17-242)||(14377089-14377314)
chr6 (17-153)||(24367283-24367419)
chr6 (22-103)||(15462224-15462305)
chr6 (22-192)||(21567214-21567384)
chr6 (22-99)||(16924956-16925033)
chr6 (22-99)||(2872118-2872195)
chr6 (22-99)||(16574778-16574855)
chr6 (22-99)||(16620525-16620602)
chr6 (22-99)||(29589755-29589832)
chr6 (22-142)||(30678297-30678417)
chr6 (16-99)||(5836544-5836627)
chr6 (22-96)||(27190324-27190398)
chr6 (22-96)||(27258842-27258916)
chr6 (22-99)||(28312518-28312595)
chr6 (32-99)||(22829702-22829769)
chr6 (16-99)||(23081305-23081388)
chr6 (22-99)||(22436757-22436834)
chr6 (38-99)||(24293098-24293159)
chr6 (22-99)||(27559285-27559362)
chr6 (22-99)||(28260513-28260590)
chr6 (22-99)||(28285326-28285403)
chr6 (22-99)||(28339262-28339339)
chr6 (16-144)||(23085096-23085224)
chr6 (33-96)||(18182686-18182749)
chr6 (16-99)||(18405260-18405343)
chr6 (22-77)||(19867575-19867630)
chr6 (22-99)||(25115440-25115517)
chr6 (33-78)||(16379710-16379755)
chr6 (33-78)||(16647306-16647351)
[»] scaffold0708 (1 HSPs)
scaffold0708 (17-240)||(5178-5401)
[»] scaffold1433 (1 HSPs)
scaffold1433 (17-240)||(1344-1567)
[»] scaffold0404 (1 HSPs)
scaffold0404 (17-240)||(7792-8015)
[»] chr8 (36 HSPs)
chr8 (16-173)||(21928512-21928669)
chr8 (22-240)||(31414005-31414223)
chr8 (16-173)||(19985264-19985421)
chr8 (16-201)||(22373953-22374138)
chr8 (17-244)||(22027749-22027976)
chr8 (19-206)||(20391173-20391360)
chr8 (22-240)||(29300899-29301117)
chr8 (17-237)||(16268700-16268920)
chr8 (17-237)||(28983996-28984216)
chr8 (22-213)||(22053953-22054144)
chr8 (17-114)||(28989215-28989312)
chr8 (133-201)||(6606981-6607049)
chr8 (22-99)||(17671636-17671713)
chr8 (22-99)||(19115490-19115567)
chr8 (22-99)||(20015877-20015954)
chr8 (22-99)||(22031193-22031270)
chr8 (22-99)||(22117789-22117866)
chr8 (22-99)||(22126573-22126650)
chr8 (22-99)||(32603235-32603312)
chr8 (24-96)||(22375071-22375143)
chr8 (22-99)||(18859667-18859744)
chr8 (22-99)||(19481686-19481763)
chr8 (22-99)||(19981057-19981134)
chr8 (22-99)||(30310758-30310835)
chr8 (32-99)||(22042927-22042994)
chr8 (16-99)||(22421506-22421589)
chr8 (29-99)||(21391475-21391545)
chr8 (29-99)||(21780801-21780871)
chr8 (22-99)||(15536473-15536550)
chr8 (22-99)||(21164152-21164229)
chr8 (22-99)||(21254035-21254112)
chr8 (22-99)||(22129231-22129308)
chr8 (16-69)||(22523630-22523683)
chr8 (17-61)||(27357621-27357665)
chr8 (33-78)||(20649990-20650035)
chr8 (29-69)||(21785999-21786039)
[»] scaffold0310 (1 HSPs)
scaffold0310 (25-240)||(11033-11248)
[»] scaffold0190 (1 HSPs)
scaffold0190 (24-231)||(30368-30575)
[»] scaffold0034 (2 HSPs)
scaffold0034 (17-244)||(1981-2208)
scaffold0034 (22-103)||(70425-70506)
[»] scaffold1056 (1 HSPs)
scaffold1056 (16-173)||(1768-1925)
[»] scaffold0420 (1 HSPs)
scaffold0420 (17-244)||(8662-8889)
[»] scaffold0405 (1 HSPs)
scaffold0405 (18-171)||(5651-5804)
[»] scaffold0192 (1 HSPs)
scaffold0192 (16-201)||(29574-29759)
[»] scaffold2062 (1 HSPs)
scaffold2062 (25-244)||(901-1125)
[»] scaffold0367 (1 HSPs)
scaffold0367 (17-242)||(9052-9277)
[»] scaffold0010 (3 HSPs)
scaffold0010 (17-242)||(39364-39589)
scaffold0010 (22-99)||(14477-14554)
scaffold0010 (16-69)||(4962-5015)
[»] scaffold0243 (2 HSPs)
scaffold0243 (17-245)||(9800-10028)
scaffold0243 (16-99)||(24119-24202)
[»] scaffold0139 (1 HSPs)
scaffold0139 (17-219)||(19023-19225)
[»] scaffold0035 (2 HSPs)
scaffold0035 (22-244)||(5858-6080)
scaffold0035 (16-145)||(41236-41365)
[»] scaffold0222 (2 HSPs)
scaffold0222 (17-245)||(20862-21090)
scaffold0222 (22-224)||(536-738)
[»] chr2 (39 HSPs)
chr2 (17-237)||(20848239-20848459)
chr2 (17-244)||(23274243-23274470)
chr2 (17-224)||(19716603-19716810)
chr2 (25-224)||(19721166-19721365)
chr2 (16-173)||(23113372-23113528)
chr2 (22-192)||(23097636-23097806)
chr2 (22-99)||(12577008-12577085)
chr2 (16-152)||(30208578-30208714)
chr2 (22-99)||(9338237-9338314)
chr2 (22-99)||(9486871-9486948)
chr2 (22-99)||(10871505-10871582)
chr2 (22-99)||(16983895-16983972)
chr2 (22-99)||(17001655-17001732)
chr2 (22-99)||(22323053-22323130)
chr2 (22-99)||(24265025-24265102)
chr2 (22-99)||(24705193-24705270)
chr2 (22-99)||(24712689-24712766)
chr2 (22-99)||(44383281-44383358)
chr2 (22-96)||(27220671-27220745)
chr2 (22-80)||(27373924-27373982)
chr2 (22-99)||(11351422-11351499)
chr2 (22-99)||(21322977-21323054)
chr2 (16-99)||(23065062-23065145)
chr2 (16-99)||(23074512-23074595)
chr2 (21-99)||(19817501-19817579)
chr2 (22-80)||(23029191-23029249)
chr2 (22-99)||(22742677-22742754)
chr2 (22-99)||(24874461-24874538)
chr2 (22-99)||(45673723-45673800)
chr2 (16-99)||(22733485-22733568)
chr2 (32-99)||(23204979-23205046)
chr2 (32-99)||(23676583-23676650)
chr2 (22-80)||(21142771-21142829)
chr2 (22-99)||(24657369-24657446)
chr2 (22-99)||(24678142-24678219)
chr2 (16-73)||(24817577-24817634)
chr2 (33-101)||(22739363-22739431)
chr2 (33-102)||(22280771-22280840)
chr2 (29-77)||(23105461-23105509)
[»] scaffold0026 (1 HSPs)
scaffold0026 (34-201)||(51716-51883)
[»] scaffold0020 (2 HSPs)
scaffold0020 (25-213)||(98643-98831)
scaffold0020 (16-201)||(176035-176219)
[»] scaffold0706 (1 HSPs)
scaffold0706 (17-244)||(5238-5465)
[»] scaffold0088 (1 HSPs)
scaffold0088 (17-240)||(29982-30205)
[»] scaffold0001 (3 HSPs)
scaffold0001 (17-240)||(514386-514609)
scaffold0001 (16-73)||(441700-441757)
scaffold0001 (16-99)||(496067-496150)
[»] scaffold0865 (1 HSPs)
scaffold0865 (19-173)||(1372-1526)
[»] scaffold0133 (1 HSPs)
scaffold0133 (19-173)||(28385-28539)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-240)||(251670-251890)
scaffold0009 (32-99)||(230026-230093)
[»] scaffold0004 (2 HSPs)
scaffold0004 (17-242)||(325755-325980)
scaffold0004 (16-114)||(200627-200725)
[»] scaffold0203 (1 HSPs)
scaffold0203 (17-244)||(883-1110)
[»] scaffold0041 (1 HSPs)
scaffold0041 (17-237)||(41783-42003)
[»] scaffold1517 (1 HSPs)
scaffold1517 (53-240)||(1520-1707)
[»] scaffold0118 (1 HSPs)
scaffold0118 (17-240)||(509-732)
[»] scaffold1288 (1 HSPs)
scaffold1288 (16-114)||(14-112)
[»] scaffold0585 (1 HSPs)
scaffold0585 (16-114)||(4248-4346)
[»] scaffold0523 (3 HSPs)
scaffold0523 (91-244)||(5562-5715)
scaffold0523 (18-96)||(2920-2998)
scaffold0523 (48-237)||(11779-11968)
[»] scaffold0053 (2 HSPs)
scaffold0053 (95-244)||(62801-62950)
scaffold0053 (22-204)||(65367-65549)
[»] scaffold1530 (1 HSPs)
scaffold1530 (17-103)||(631-717)
[»] scaffold1299 (1 HSPs)
scaffold1299 (22-192)||(1929-2099)
[»] scaffold0509 (1 HSPs)
scaffold0509 (16-206)||(11875-12065)
[»] scaffold0443 (1 HSPs)
scaffold0443 (17-114)||(11857-11954)
[»] scaffold0167 (2 HSPs)
scaffold0167 (17-102)||(1168-1253)
scaffold0167 (121-242)||(5205-5326)
[»] scaffold0068 (1 HSPs)
scaffold0068 (23-240)||(67141-67358)
[»] scaffold0023 (3 HSPs)
scaffold0023 (23-224)||(164450-164651)
scaffold0023 (16-77)||(30770-30831)
scaffold0023 (16-101)||(47155-47240)
[»] scaffold0664 (1 HSPs)
scaffold0664 (17-173)||(7086-7242)
[»] scaffold0076 (1 HSPs)
scaffold0076 (22-114)||(53582-53674)
[»] scaffold0058 (1 HSPs)
scaffold0058 (17-245)||(22170-22398)
[»] scaffold0476 (2 HSPs)
scaffold0476 (22-192)||(626-796)
scaffold0476 (24-99)||(10841-10916)
[»] scaffold0074 (2 HSPs)
scaffold0074 (17-103)||(15171-15257)
scaffold0074 (29-96)||(6173-6240)
[»] scaffold0239 (1 HSPs)
scaffold0239 (22-102)||(9957-10037)
[»] scaffold0146 (1 HSPs)
scaffold0146 (116-244)||(313-441)
[»] scaffold0072 (1 HSPs)
scaffold0072 (17-165)||(54095-54243)
[»] scaffold0029 (2 HSPs)
scaffold0029 (22-198)||(93969-94145)
scaffold0029 (22-198)||(115615-115791)
[»] scaffold0348 (2 HSPs)
scaffold0348 (22-213)||(4909-5100)
scaffold0348 (22-208)||(17549-17735)
[»] scaffold0261 (4 HSPs)
scaffold0261 (16-119)||(12502-12605)
scaffold0261 (16-119)||(20682-20785)
scaffold0261 (179-244)||(12441-12506)
scaffold0261 (179-244)||(20621-20686)
[»] scaffold0114 (2 HSPs)
scaffold0114 (22-213)||(40111-40302)
scaffold0114 (25-99)||(17523-17597)
[»] scaffold0011 (7 HSPs)
scaffold0011 (17-168)||(151615-151766)
scaffold0011 (16-99)||(23707-23790)
scaffold0011 (176-244)||(153699-153767)
scaffold0011 (29-78)||(73792-73841)
scaffold0011 (29-78)||(78173-78222)
scaffold0011 (26-78)||(175708-175760)
scaffold0011 (33-78)||(182054-182099)
[»] scaffold0765 (1 HSPs)
scaffold0765 (22-168)||(6362-6508)
[»] scaffold0298 (1 HSPs)
scaffold0298 (17-103)||(9397-9483)
[»] scaffold0005 (1 HSPs)
scaffold0005 (22-168)||(263279-263425)
[»] scaffold0003 (2 HSPs)
scaffold0003 (22-168)||(203434-203580)
scaffold0003 (23-99)||(424362-424438)
[»] scaffold1373 (1 HSPs)
scaffold1373 (22-103)||(4-85)
[»] scaffold0266 (1 HSPs)
scaffold0266 (93-244)||(16761-16912)
[»] scaffold2165 (1 HSPs)
scaffold2165 (56-240)||(836-1020)
[»] scaffold0235 (2 HSPs)
scaffold0235 (22-244)||(8491-8713)
scaffold0235 (22-244)||(18705-18927)
[»] scaffold1426 (1 HSPs)
scaffold1426 (48-237)||(1643-1832)
[»] scaffold0130 (2 HSPs)
scaffold0130 (16-173)||(3992-4146)
scaffold0130 (16-80)||(7972-8036)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-86)||(110657-110727)
[»] scaffold0100 (1 HSPs)
scaffold0100 (42-144)||(16738-16840)
[»] scaffold0293 (1 HSPs)
scaffold0293 (16-141)||(15457-15582)
[»] scaffold0079 (1 HSPs)
scaffold0079 (22-99)||(36551-36628)
[»] scaffold0040 (2 HSPs)
scaffold0040 (16-96)||(17925-18005)
scaffold0040 (16-99)||(111081-111164)
[»] scaffold0148 (1 HSPs)
scaffold0148 (24-99)||(2054-2129)
[»] scaffold0012 (1 HSPs)
scaffold0012 (24-141)||(216552-216669)
[»] scaffold0028 (3 HSPs)
scaffold0028 (23-97)||(17991-18065)
scaffold0028 (23-99)||(11523-11599)
scaffold0028 (23-99)||(55058-55134)
[»] scaffold0550 (1 HSPs)
scaffold0550 (22-99)||(10332-10409)
[»] scaffold0529 (1 HSPs)
scaffold0529 (16-201)||(5135-5320)
[»] scaffold0412 (1 HSPs)
scaffold0412 (22-99)||(15753-15830)
[»] scaffold0411 (1 HSPs)
scaffold0411 (22-99)||(8463-8540)
[»] scaffold0259 (1 HSPs)
scaffold0259 (22-99)||(8311-8388)
[»] scaffold0055 (1 HSPs)
scaffold0055 (22-99)||(22300-22377)
[»] scaffold0052 (1 HSPs)
scaffold0052 (22-99)||(7289-7366)
[»] scaffold0044 (2 HSPs)
scaffold0044 (22-99)||(3477-3554)
scaffold0044 (22-99)||(17213-17290)
[»] scaffold0017 (3 HSPs)
scaffold0017 (22-99)||(17240-17317)
scaffold0017 (16-96)||(24353-24433)
scaffold0017 (22-77)||(195034-195089)
[»] scaffold0507 (1 HSPs)
scaffold0507 (16-144)||(11075-11203)
[»] scaffold0007 (1 HSPs)
scaffold0007 (23-99)||(48719-48795)
[»] scaffold0621 (2 HSPs)
scaffold0621 (16-99)||(64-147)
scaffold0621 (16-99)||(4481-4564)
[»] scaffold0410 (1 HSPs)
scaffold0410 (29-96)||(201-268)
[»] scaffold0317 (1 HSPs)
scaffold0317 (121-244)||(2783-2906)
[»] scaffold0120 (2 HSPs)
scaffold0120 (16-99)||(11311-11394)
scaffold0120 (33-78)||(25242-25287)
[»] scaffold0305 (1 HSPs)
scaffold0305 (29-99)||(2924-2994)
[»] scaffold2059 (1 HSPs)
scaffold2059 (22-99)||(943-1020)
[»] scaffold1423 (1 HSPs)
scaffold1423 (22-99)||(552-629)
[»] scaffold0431 (1 HSPs)
scaffold0431 (22-99)||(10421-10498)
[»] scaffold0181 (1 HSPs)
scaffold0181 (22-99)||(29102-29179)
[»] scaffold0109 (2 HSPs)
scaffold0109 (22-99)||(13298-13375)
scaffold0109 (22-99)||(41208-41285)
[»] scaffold0282 (1 HSPs)
scaffold0282 (16-144)||(13608-13736)
[»] scaffold0049 (1 HSPs)
scaffold0049 (16-64)||(49086-49134)
[»] scaffold0342 (1 HSPs)
scaffold0342 (16-99)||(14440-14523)
[»] scaffold0278 (1 HSPs)
scaffold0278 (16-99)||(3598-3681)
[»] scaffold0273 (1 HSPs)
scaffold0273 (22-77)||(93-148)
[»] scaffold0207 (1 HSPs)
scaffold0207 (16-99)||(7913-7996)
[»] scaffold0075 (1 HSPs)
scaffold0075 (16-99)||(55644-55727)
[»] scaffold0022 (3 HSPs)
scaffold0022 (16-99)||(41679-41762)
scaffold0022 (16-99)||(75399-75482)
scaffold0022 (24-77)||(34911-34964)
[»] scaffold0605 (1 HSPs)
scaffold0605 (53-103)||(1364-1414)
[»] scaffold0177 (1 HSPs)
scaffold0177 (22-96)||(11533-11607)
[»] scaffold1459 (1 HSPs)
scaffold1459 (38-99)||(1206-1267)
[»] scaffold0423 (1 HSPs)
scaffold0423 (22-99)||(2437-2514)
[»] scaffold0403 (1 HSPs)
scaffold0403 (22-99)||(14964-15041)
[»] scaffold0331 (1 HSPs)
scaffold0331 (16-141)||(15111-15236)
[»] scaffold0042 (2 HSPs)
scaffold0042 (22-99)||(36994-37071)
scaffold0042 (16-144)||(26399-26527)
[»] scaffold0993 (1 HSPs)
scaffold0993 (16-80)||(1029-1093)
[»] scaffold0080 (4 HSPs)
scaffold0080 (22-98)||(31936-32012)
scaffold0080 (22-98)||(37402-37478)
scaffold0080 (32-99)||(10412-10479)
scaffold0080 (32-99)||(13067-13134)
[»] scaffold0324 (1 HSPs)
scaffold0324 (16-99)||(2036-2119)
[»] scaffold0122 (1 HSPs)
scaffold0122 (16-99)||(40681-40764)
[»] scaffold0084 (1 HSPs)
scaffold0084 (16-99)||(8270-8353)
[»] scaffold0077 (1 HSPs)
scaffold0077 (24-99)||(57788-57863)
[»] scaffold0018 (2 HSPs)
scaffold0018 (16-99)||(23472-23555)
scaffold0018 (16-73)||(9551-9608)
[»] scaffold0090 (1 HSPs)
scaffold0090 (22-64)||(21904-21946)
[»] scaffold0962 (1 HSPs)
scaffold0962 (33-78)||(2635-2680)
[»] scaffold0467 (2 HSPs)
scaffold0467 (33-102)||(13502-13571)
scaffold0467 (33-78)||(816-861)
[»] scaffold0333 (1 HSPs)
scaffold0333 (22-99)||(18703-18780)
[»] scaffold0270 (2 HSPs)
scaffold0270 (16-73)||(6920-6977)
scaffold0270 (16-73)||(14050-14107)
[»] scaffold0218 (2 HSPs)
scaffold0218 (33-78)||(1147-1192)
scaffold0218 (22-75)||(24910-24963)
[»] scaffold0124 (1 HSPs)
scaffold0124 (33-78)||(5000-5045)
[»] scaffold0019 (1 HSPs)
scaffold0019 (39-80)||(171188-171229)
[»] scaffold0789 (1 HSPs)
scaffold0789 (32-99)||(1-68)
[»] scaffold0358 (1 HSPs)
scaffold0358 (33-99)||(9011-9077)
[»] scaffold1881 (1 HSPs)
scaffold1881 (22-79)||(674-731)
[»] scaffold0673 (1 HSPs)
scaffold0673 (33-78)||(5499-5544)
[»] scaffold0225 (1 HSPs)
scaffold0225 (33-78)||(26460-26505)
[»] scaffold0170 (1 HSPs)
scaffold0170 (33-78)||(35149-35194)
[»] scaffold0141 (1 HSPs)
scaffold0141 (33-78)||(24027-24072)
[»] scaffold0081 (2 HSPs)
scaffold0081 (22-99)||(21657-21734)
scaffold0081 (22-99)||(37081-37158)
[»] scaffold0021 (2 HSPs)
scaffold0021 (33-78)||(8221-8266)
scaffold0021 (33-78)||(90566-90611)
[»] scaffold0112 (1 HSPs)
scaffold0112 (26-78)||(3556-3608)


Alignment Details
Target: scaffold0108 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 50152 - 50380
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||    
T  50152 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagtcggtcctcattc 50251  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  50252 actgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgggtacactacgaactgatatgaccttcctcattgcagttgt 50351  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| ||||||||||||    
T  50352 agcaaacaatatccccacgcttacaatca 50380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 16825763 - 16825533
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat--taaagaaacaagtacctctgataagttcgtcctcat 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||  ||||||||    
T  16825763 atcaacagcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtactatattaaagaaacaagtacctctgataagtcagtcctcat 16825664  T
Q  114 tcactgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagtt 213  Q
    |||| | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  16825663 tcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcaaactgatatgaccttcctcattgaagtt 16825564  T
Q  214 gtagcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||||||||||| ||||||||||||    
T  16825563 gtagcaaacaatgtccccacgcttacaatca 16825533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 35982839 - 35983056
Alignment:
Q  27 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgt 126  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||  |||||||||||| | ||||||    
T  35982839 tgaaacaatgagtagtaccagtatctataatagcaattaaaagagtactattaaagaaacaagtatctctgataagtcggtcctcattcaccgtttgcgt 35982938  T
Q  127 acgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatg 226  Q
    |  ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||| ||  ||||||||||||||||     
T  35982939 aacagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacaatgcgaactaatatgtccttcctcattacagttgtagcaaacaata 35983038  T
Q  227 tccccccgcttacaatca 244  Q
    ||||| ||||| ||||||    
T  35983039 tccccacgcttgcaatca 35983056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 12180992 - 12181219
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||| |      
T  12180992 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaactaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactag 12181091  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | || ||||| ||| ||||||||||| || ||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||| | || ||    
T  12181092 tggtttacgtaccagtcaaagcaaacactttaccaccggtcctaaccttcttcggttgcgtacactacgaactgatatgaccttccttgttgcaattata 12181191  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
     ||||||||||||||  |||||||||||    
T  12181192 acaaacaatgtccccaagcttacaatca 12181219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 17494295 - 17494506
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||| | |    
T  17494295 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcatgtcctcactaa 17494394  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || ||||||| |||||| |||||||||||||||||| |||| ||    
T  17494395 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgagtacactgcgaactaatatgaccttcctcgttgcagttata 17494494  T
Q  217 gcaaacaatgtc 228  Q
    ||||||||||||    
T  17494495 gcaaacaatgtc 17494506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 14291014 - 14290857
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  14291014 atcaacagcaatgaaacaatgagtagcactagtgtctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattc 14290915  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || | |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  14290914 acggtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttaggct 14290857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 12358008 - 12357781
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||   |||||| |      
T  12358008 tcaatagcaatgaaacaatgagtagcactagtgtctataatagcaattaaaggtgtactattaaagaaacaagtacctctgataagtcgatcctcactag 12357909  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || ||||||| ||||||||||||||||||||| ||| |||| ||    
T  12357908 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttata 12357809  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||||| ||| |||||||||||||||    
T  12357808 gcaaacaacgtctccccgcttacaatca 12357781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 11958657 - 11958439
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||  |||||||||    |      
T  11958657 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 11958558  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| || |||||||| || ||||| |||||| ||||||| ||||| |||||||| ||||||||||||| ||| |||||| |||||||||| |    
T  11958557 tgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgactttcttcgttgcagttgtagcaga 11958458  T
Q  222 caatgtccccccgcttaca 240  Q
    |||||||| | ||||||||    
T  11958457 caatgtcctcacgcttaca 11958439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 16327185 - 16326967
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||  |||||||||    |      
T  16327185 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagtcggtcctcattggtagtc 16327086  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| || ||||||||||| ||||| || ||||||||||| ||||  ||||||| ||||||||||||||| ||  | ||| |||||||||| |    
T  16327085 tgcgtaccagtcaatgcaaacacctttccaccagttctaaccttcttcggcttagtacactgcgaactgatatgaccctctccattgcagttgtagcaga 16326986  T
Q  222 caatgtccccccgcttaca 240  Q
    |||||||||| ||||||||    
T  16326985 caatgtccccacgcttaca 16326967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 12857973 - 12857793
Alignment:
Q  20 acagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactg 119  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |    
T  12857973 acagcaatgaaacaataactagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag-tcgtcctcattaacag 12857875  T
Q  120 attgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
     |||||||| ||| ||||||||||||||||||||||||  | |||||||||||| | | |||||||| || |||||||||||    
T  12857874 tttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactacgagctaatatgaccttc 12857793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 11949406 - 11949179
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |      
T  11949406 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagttgatcctcactag 11949307  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || |||||  ||||||||||||| | || |||||||| | ||||||| ||||||||||| ||| |||| ||    
T  11949306 tggtttgcgtaccagtcagagcaaacactttaccaccgatcctaaccttcttcgtctacgtacactgcaaactgatgtgaccttcctcattgcagttata 11949207  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    ||||||||  || |||||||||||||||    
T  11949206 gcaaacaacatctccccgcttacaatca 11949179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 31692666 - 31692459
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  31692666 tcaatagcaatgaaacaatgagtagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 31692567  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | |||||||||||| ||||| |||||||||||||| |||||||||||||  ||||||||||| || ||||| ||| |||| ||    
T  31692566 tggtttgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttata 31692467  T
Q  217 gcaaacaa 224  Q
     |||||||    
T  31692466 acaaacaa 31692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 31941551 - 31941738
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  31941551 tcaatagcaatgaaaaaatgagtagcatcagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 31941650  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctc 204  Q
      | |||||||| ||| |||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||| || |||||    
T  31941651 tggtttgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactatgaactgatatggccctcctc 31941738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 10408616 - 10408836
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||      
T  10408616 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagttggtcctcattag 10408715  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  10408716 gagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 10408815  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  10408816 acagacaatgtccccacgctt 10408836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 47126592 - 47126812
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||      
T  47126592 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcgttag 47126691  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  47126692 gagtctgcgtaccagtcaaagcaaacaccttaccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 47126791  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  47126792 acagacaatgtccccacgctt 47126812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 213
Target Start/End: Complemental strand, 16832004 - 16831813
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||    |      
T  16832004 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 16831905  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagtt 213  Q
    ||||||| ||| |||||||||||||| ||||| || ||||||||||| ||||| || ||||  | ||||||||| || || |||||| ||||    
T  16831904 tgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagtt 16831813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 17189027 - 17189197
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||    | |    
T  17189027 agcaatgaaacaatgagtagcacccgtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctcattagtagtt 17189126  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgat 192  Q
    ||||||| ||| || |||||||| || ||||| || |||| |||||| ||||| |||||||  ||||||||    
T  17189127 tgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtacactgtgaactgat 17189197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 18131827 - 18131603
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  18131827 tcaatagcaatgaaacaatgagtagcaccagg-tctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 18131729  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | || |||||| || ||||| || |||||||||||  | || ||||||| |||||| ||||||| |||||| ||| |||| ||    
T  18131728 tggtttgcgtaccagtcagagtaaacactttaccaccggttctaaccttcttcagttgagtacactgcgaactaatatgactttcctcattgcagttata 18131629  T
Q  217 gcaaacaatgtccccccgcttacaat 242  Q
    ||| || |  ||||| ||||||||||    
T  18131628 gcacactacatccccacgcttacaat 18131603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 28756967 - 28757187
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  28756967 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 28757066  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| || ||  | |||  |||||| ||||  | |||||  ||||| |||||||||||  | ||| | |||||    
T  28757067 gagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactaatatgaccttctccattgcaattgta 28757166  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  28757167 acagacaatgtccccacgctt 28757187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 13318010 - 13317864
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||    |      
T  13318010 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 13317911  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttctt 168  Q
    ||||||| ||| ||||||||||| || ||||| || || ||||||||    
T  13317910 tgcgtaccagtcaaagcaaacacttttccaccagttctgaccttctt 13317864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 12509964 - 12509867
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  12509964 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 12509867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 15230250 - 15230407
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||   ||||||||     
T  15230250 atcaacagcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctatgataagtcaatcctcatta 15230349  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || |   | ||||  || || ||||||||||| |||||||||  | ||||||||||||    
T  15230350 accgtccgtgtaccggtcaatgcaaacacctttccacctgtctgatccttcttaggct 15230407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 15236118 - 15236275
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||   ||||||||     
T  15236118 atcaacagcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctatgataagtcaatcctcatta 15236217  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || |   | ||||  || || ||||||||||| |||||||||  | ||||||||||||    
T  15236218 accgtccgtgtaccggtcaatgcaaacacctttccacctgtctgatccttcttaggct 15236275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 24189957 - 24190037
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24189957 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 24190037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 8744866 - 8744789
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8744866 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 8744789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 13944677 - 13944754
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13944677 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 13944754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 10417521 - 10417440
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10417521 agcaatgaaacaatgtgtagcaccggtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 10417440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 16378410 - 16378330
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  16378410 agcaatgaaacaatgagtagcaccagtgtctatgatagcaattaaaggagtactattaaagaaacaagcacctctgataag 16378330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 12272986 - 12273047
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12272986 tcaacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactatt 12273047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3688586 - 3688663
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  3688586 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 3688663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10008243 - 10008320
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  10008243 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10908853 - 10908930
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  10908853 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10908930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 12889352 - 12889429
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  12889352 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 12889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 13255333 - 13255410
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  13255333 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13255410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 15345732 - 15345655
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  15345732 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15345655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 15358726 - 15358803
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  15358726 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15358803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 15586879 - 15586802
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  15586879 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15586802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 15713543 - 15713466
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  15713543 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15713466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 24185833 - 24185910
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  24185833 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 43165318 - 43165395
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  43165318 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 43165395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 48428090 - 48428167
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  48428090 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 48428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 16638410 - 16638493
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16638410 atcaaaagcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16638493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 26790898 - 26790823
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  26790898 caataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 26790823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 5422417 - 5422359
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  5422417 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 5422359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 6603378 - 6603455
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  6603378 agcaataaagcaatgggtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 6603455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 11861033 - 11861094
Alignment:
Q  38 gtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  11861033 gtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 11861094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 15400004 - 15399927
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| ||||||||||  ||||||||||||||||   | ||||||||||||||    
T  15400004 agcaataaaacaatgcgtagcaccagtatcaataatagcaaccaaaggagtattattaatatagcaagtacctctgat 15399927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16754188 - 16754111
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16754188 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16754111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16804434 - 16804357
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   ||||||||| ||||||    
T  16804434 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacatctgat 16804357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 20059541 - 20059464
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  20059541 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 20059464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 53382505 - 53382428
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  53382505 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 53382428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 15013243 - 15013115
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    |||| ||| |||| ||| ||| |||||||||||||| ||||||||||||  |||||| |||||| ||||||||||| ||    ||||||||| |||  ||    
T  15013243 caataaaaaaatgtgtaacactagtatctataatagtaattaaaggagtgctattaatgaaacatgtacctctgattagacgatcctcattcgctgtctg 15013144  T
Q  124 cgtacgagttaaagcaaacaccttgccac 152  Q
     |||| || ||||||||||||||| ||||    
T  15013143 agtaccagctaaagcaaacaccttcccac 15013115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 12843596 - 12843513
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| ||||||  || ||| |||  ||||||||||||||||    
T  12843596 atcaatagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtatactatcaaaataacaagtacctctgat 12843513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 15262267 - 15262350
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  15262267 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 15262350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 15065714 - 15065772
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||| ||||||||||||    
T  15065714 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgagtattattaa 15065772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 23079504 - 23079427
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| || |||| |||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  23079504 agcaataaaacaatgtgttgcacaagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23079427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 14874055 - 14873997
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| || |||||| |||| |||||||||| |||||||||||||||||    
T  14874055 agcaataaaacaatgtgttgcaccaatatcaataatagcaactaaaggagtattattaa 14873997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 16694807 - 16694884
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||| ||| ||| |||||||||||||   | ||||||||||||||    
T  16694807 agcaataaagcaatgcgtagcaccagtatcaataataacaactaagggagtattattaatatagcaagtacctctgat 16694884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 8271875 - 8271830
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  8271875 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 8271830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 13028721 - 13028640
Alignment:
Q  133 taaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttg 214  Q
    ||||||||||||||| ||||||| |  | |||||||||||| | | |||| |||||| ||||| |||||||| ||| |||||    
T  13028721 taaagcaaacacctttccacctgcctgagccttcttaggcttcttgcactgcgaactaatatgtccttcctctttgcagttg 13028640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 13964831 - 13964786
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  13964831 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 13964786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 30150021 - 30150066
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  30150021 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 30150066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 12774 - 13002
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  12774 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacccctgataagttggtcctcattc 12873  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||  ||||||    
T  12874 accgtttgcgtaccagttaacgcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgt 12973  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||  ||||| ||||||||||||    
T  12974 agcaaacaacatccccacgcttacaatca 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 63776 - 63548
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  63776 atcaacaacaatgaaacaatgagtaacaccagtatctataatagcaattaaaagagtactattaaagaaacaagtacctctgataagtcggtcctcattc 63677  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||    
T  63676 actgtttgcgtaccagtcaaagcaaacaccttgccacttgtcctaaccttcttaggctgcgtacactgcgaactgatatgaccttcctcattatagttgt 63577  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| |||||  |||||||||||    
T  63576 agcaaacaatatccccatgcttacaatca 63548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 161; Significance: 6e-86; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 70155 - 70383
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||||||||||    
T  70155 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaacaagtacctctgataagtcggtcctcattc 70254  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||  ||||||    
T  70255 accgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgt 70354  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| ||||| ||||||    
T  70355 agcaaacaatatccccacgcttgcaatca 70383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 60786 - 60857
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaaca 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  60786 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaaca 60857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 4561 - 4333
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  4561 atcaacagcaatgaaacaatgagtagcaccagtatctataatagaaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattc 4462  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || |  ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||  ||||||    
T  4461 accgtctgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgt 4362  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| ||||| ||||||    
T  4361 agcaaacaatatccccacgcttgcaatca 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 34385 - 34613
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||  ||||||||| |    
T  34385 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcagttaaaggagtactattaaagaaacaagtacctctaataagtcggtcctcattaa 34484  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
    ||| |||||||| ||| || ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||| ||    
T  34485 ctgtttgcgtaccagtcaaggcaaacacctttccacctgtcctaaccttcttcggctgcgtacactacgaactaatatgaccttcctcattgcagttata 34584  T
Q  217 gcaaacaatgtccccccgcttacaatcaa 245  Q
     ||||||| |||||| |||||||||||||    
T  34585 acaaacaacgtccccacgcttacaatcaa 34613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 15099844 - 15099616
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||     
T  15099844 atcaacagcaatgaaacaatgagtatcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacatctgataagtcggtcctcatta 15099745  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    ||||  ||| ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| |||| |    
T  15099744 actgtctgcataccagttaaagcaaacaccttaccacctgtcctaaccttcttcggctgcgtacactgcgaactgatatgaccttcctcattgcagttat 15099645  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    | ||||| |||||||| ||||||||||||    
T  15099644 aacaaacgatgtccccacgcttacaatca 15099616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 12798742 - 12798514
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  12798742 atcaacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattc 12798643  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| || ||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| || ||  ||||||    
T  12798642 actgtttgcgtaccagtcaacgcaaaaaccttgccacctgtcctagccttcttaggctgtgtacactgcgaactgatatgaccttcttcattacagttgt 12798543  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||  ||||| |||| |||||||    
T  12798542 agcaaacaacatccccacgctcacaatca 12798514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 14261487 - 14261259
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||    
T  14261487 atcaacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaataagtacctctgataagtcggtcctcattc 14261388  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |  | |||||||| ||| || ||||| ||||||||||||||||||||||||||||||||| || ||| |||||| ||||| |||||||| ||  ||||||    
T  14261387 atagtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcataaactgcgaactaatatgtccttcctcattacagttgt 14261288  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| ||||| ||||||    
T  14261287 agcaaacaatatccccacgcttgcaatca 14261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 19150019 - 19150247
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  19150019 atcaacaacaatgaaacaatgagtagaaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattc 19150118  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || | |||||||| ||| || ||||| || || |||||| ||||| |||||||||| |||||||||| |||||| ||||| ||||| || ||  ||||||    
T  19150119 acagtttgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgt 19150218  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| || || ||||| ||||||    
T  19150219 agcaaacaatatctccacgcttgcaatca 19150247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 20749418 - 20749646
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  20749418 atcaacaacaatgaaacaatgagtagaaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattc 20749517  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || | |||||||| ||| || ||||| || || |||||| ||||| |||||||||| |||||||||| |||||| ||||| ||||| || ||  ||||||    
T  20749518 acagtttgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcgtacactgcgaactaatatgtccttcttcattacagttgt 20749617  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| || || ||||| ||||||    
T  20749618 agcaaacaatatctccacgcttgcaatca 20749646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 13024359 - 13024576
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||    |      
T  13024359 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagt-ctattaaagaaacaagtacctctgataagtcggtcctcatttgtagtc 13024457  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| || |||||||| || ||||| |||||| ||||||| ||||| |||||||  ||||||||||||||||| |||||| |||||||||| |    
T  13024458 tgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactgagaactgatatgaccttcttcgttgcagttgtagcaga 13024557  T
Q  222 caatgtccccccgcttaca 240  Q
    ||||||| || ||||||||    
T  13024558 caatgtctccacgcttaca 13024576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 16947712 - 16947489
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||      
T  16947712 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattag 16947613  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| | | || |||||||| || ||||| || ||| |||||||  ||||  ||||||  |||||||||||||| || |||||| |||||||    
T  16947612 tagtctgcgtaccattcaatgcaaacactttcccaccggttctagccttcttcagctgaatacactgtgaactgatatgaccctcttcgttgcagttgta 16947513  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    |||||||||||| || ||||||||    
T  16947512 gcaaacaatgtctccacgcttaca 16947489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 13676460 - 13676687
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  13676460 tcaatagcaatgaaacaatgagtagcaccagcgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 13676559  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| || ||||||||||| || || | |||||  ||||||||||| || ||||| ||| |||| ||    
T  13676560 tggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttata 13676659  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||| ||||| |||||||||||||||    
T  13676660 gcaaactatgtctccccgcttacaatca 13676687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 26092038 - 26091818
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  26092038 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 26091939  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  26091938 gagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 26091839  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  26091838 acagacaatgtccccacgctt 26091818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 49155310 - 49155530
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  49155310 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 49155409  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  49155410 gagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 49155509  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  49155510 acagacaatgtccccacgctt 49155530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 40925057 - 40924837
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  40925057 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 40924958  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| || ||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  40924957 gagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 40924858  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  40924857 acagacaatgtccccacgctt 40924837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 13965908 - 13965688
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  13965908 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 13965809  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || ||||||||||| ||||| || ||| ||||||| ||||  | |||||  |||||||||||||| ||  | ||| | |||||    
T  13965808 tagtctgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgta 13965709  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| ||||| ||||| |||||    
T  13965708 gcagacaatatccccacgctt 13965688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 12459637 - 12459860
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  12459637 tcaatagcaataaaacaattagtagcatcagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatttg 12459736  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  |||||||   | ||  ||||||| || || || ||||| |||||||| ||||| |||||||  ||||| ||||||||||| || ||| |||| ||    
T  12459737 tagtctgcgtacctttcaattcaaacactttccctccggtcctgaccttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttata 12459836  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||||||||| ||||||||    
T  12459837 gcagacaatgtccccacgcttaca 12459860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 21755421 - 21755644
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  21755421 tcaatagcaataaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 21755520  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||||||||| || || ||||||||||| ||||  | |||||  || || |||||||| ||  | ||| |||||||    
T  21755521 tagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggctcaggacactgtgagctaatatgaccctctccattgcagttgta 21755620  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||| ||||| ||||||||    
T  21755621 gcagacaatatccccacgcttaca 21755644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 14140693 - 14140845
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||    |      
T  14140693 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctttcctcattagtagtc 14140792  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctg 174  Q
    ||||||| ||| |||||||| ||||| ||||| || ||||||||||| |||||    
T  14140793 tgcgtaccagtcaaagcaaataccttcccaccagttctaaccttcttcggctg 14140845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 11385664 - 11385518
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |      
T  11385664 agcaatgaaacaatgagtagcatcagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctgtcctcattagtagtc 11385565  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttctt 168  Q
    ||||||| ||| |||||||||||||| ||||| || |||| ||||||    
T  11385564 tgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctt 11385518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 14283614 - 14283457
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||||   |||||||||      
T  14283614 tcaatagcaatgaaacaatgagtagcaccaatgtctataatagcaatgaaaggagtactattaaagaaacaagtacctctgataagacagtcctcattag 14283515  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctg 174  Q
      |  ||||||| ||| ||||||||||| || ||||| || ||||||||||| |||||    
T  14283514 tagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctg 14283457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 15343445 - 15343525
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15343445 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 15343525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 12204041 - 12203884
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||   ||||||||     
T  12204041 atcaacaacaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcatta 12203942  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || |  |  ||||  || || ||||||||||| |||||||||  | ||||||||||||    
T  12203941 accgtctatgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggct 12203884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 18051188 - 18051111
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18051188 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 18051111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 26115830 - 26115694
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||      
T  26115830 tcaatagcaataaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagtcggtcctcattag 26115731  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacc 153  Q
      |  ||||||| ||| |||||||||||||| |||||    
T  26115730 gagtgtgcgtaccagtcaaagcaaacacctttccacc 26115694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 15627531 - 15627659
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||| ||||| |||||||| ||| |||||||||| ||||||| ||||||||||||| ||| |||||| || |||||| | || |    ||||||||||    
T  15627531 atcaacggcaataaaacaatgcgtatcaccagtatcaataatagtaattaaaggagtactatcaaagaagcatgtacctataatcaaccggtcctcattc 15627630  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
    |||| |||||||| ||| |||||||||||    
T  15627631 actgtttgcgtaccagtcaaagcaaacac 15627659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 11550365 - 11550282
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  11550365 atcaaaagcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 11550282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8710618 - 8710695
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  8710618 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 13689054 - 13689131
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  13689054 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13689131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 14335409 - 14335486
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14335409 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14335486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 14957567 - 14957644
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14957567 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14957644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 44788608 - 44788531
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  44788608 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 44788531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 9591377 - 9591454
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  9591377 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 9591454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 11234470 - 11234393
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||  |||||||||| |||||||||||||||||   | ||||||||||||||    
T  11234470 agcaataaaacaatgcgtagcaccagtattaataatagcaactaaaggagtattattaatatagcaagtacctctgat 11234393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 15158314 - 15158237
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  15158314 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 15158237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17703712 - 17703635
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||||||| |||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  17703712 agcaataaagcaatgtgtagcactagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 17703635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 18587428 - 18587351
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||| ||| |||||||||||||||||   | ||||||||||||||    
T  18587428 agcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggagtattattaatatagcaagtacctctgat 18587351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16726698 - 16726621
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||||||| |||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16726698 agcaataaagcaatgtgtagcactagtatcaataatagcaactaaaggagtattattaatatatcaagtacctctgat 16726621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18180756 - 18180833
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||| ||| |||||||||||||||||   | ||||||||||||||    
T  18180756 agcaataaagcaatgcgtagcaccagtatcaataataacaactaaaggagtattattaatatagcaagtacctctgat 18180833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 14042702 - 14042785
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||| ||| |||||| ||| ||| |||  |||| |||||||||||    
T  14042702 atcaatagcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggtgtactatcaaaataacatgtacctctgat 14042785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 14352732 - 14352815
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||| ||| |||||| ||| ||| |||  |||| |||||||||||    
T  14352732 atcaatagcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggtgtactatcaaaataacatgtacctctgat 14352815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 12690515 - 12690591
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||||||||||| |||||  |||||||||| |||||||||||||||||   | ||||||||||||||    
T  12690515 agcaataaagcaatgagtagcactagtata-ataatagcaactaaaggagtattattaatatagcaagtacctctgat 12690591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 15146186 - 15146133
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaagg 69  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| ||||||    
T  15146186 atcaagagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaagg 15146133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 38409 - 38330
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctc 95  Q
    ||||| || ||| ||| |||| ||||| ||||||||||||||||||||||||||   ||| || | ||||||||||||||    
T  38409 atcaagagaaataaaagaatgcgtagctccagtatctataatagcaattaaagggaaattgttgatgaaacaagtacctc 38330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 4442951 - 4442996
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  4442951 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 4442996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 7826924 - 7826969
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  7826924 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 7826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 13459057 - 13459102
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  13459057 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 13459102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 27105020 - 27104975
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  27105020 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 27104975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 27173305 - 27173350
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  27173305 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 27173350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 12712845 - 12712817
Alignment:
Q  75 tattaaagaaacaagtacctctgataagt 103  Q
    |||||||||||||||||||||||||||||    
T  12712845 tattaaagaaacaagtacctctgataagt 12712817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 5228 - 5456
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  5228 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattc 5327  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| || ||||| ||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||| || ||  ||||||    
T  5328 actgtttgcgtaccagtcaacgcaaaaaccttgccacctgacctagacttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgt 5427  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||  ||||| ||||||||||||    
T  5428 agcaaacaacatccccacgcttacaatca 5456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 8e-79; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 14993621 - 14993413
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||| |||||  ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  14993621 atcaacagcaatgaaataatgaagagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattc 14993522  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| | | |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||    
T  14993521 actgtttgcgtaccattcaaagcaaacaccttgccacctgtcctaaccttcttaggttgcgtacactgcgaactgatatgaccttcctcattgcagttgt 14993422  T
Q  216 agcaaacaa 224  Q
    |||||||||    
T  14993421 agcaaacaa 14993413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 15266794 - 15267022
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||| ||| |     
T  15266794 atcaacatcaatgaaacaatgagtagtaccagtgtctataatagcaattaaaggagtactattaaagaaacaactacctctgataagtctgtcttcacta 15266893  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
      || ||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |    
T  15266894 gttgtttgcgtactggttaaagcaaacaccttgccaccggtcctaaccttcttcggctgcgtacactacgaactgatatgaccttcttcgttgcagttat 15266993  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    ||||||||||||| ||  |||||||||||    
T  15266994 agcaaacaatgtctccatgcttacaatca 15267022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 15073377 - 15073562
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||     
T  15073377 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagtcggtcctcatta 15073476  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    || | ||| |||| ||| |||| |||||||||||||||||||  | |||||||||||| | | ||||  || || |||||||||||    
T  15073477 acagtttgtgtaccagtcaaagaaaacaccttgccacctgtcagagccttcttaggcttcctgcactgtgagcttatatgaccttc 15073562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 20893055 - 20893270
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |      
T  20893055 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtc 20893154  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| |||||||||||||| ||||| || ||||||||||| ||||  ||||||| |||||||||||| || || || ||| |||||||| | |    
T  20893155 tgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgcagttgtagtaga 20893254  T
Q  222 caatgtccccccgctt 237  Q
    |||| ||||| |||||    
T  20893255 caatatccccacgctt 20893270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 3262047 - 3261827
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  3262047 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 3261948  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  3261947 gagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 3261848  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  3261847 acagacaatgtccccacgctt 3261827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 11204485 - 11204265
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  11204485 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 11204386  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| ||||| || ||| |||| || ||||  | |||||  |||||||||||||| ||  | ||| | |||||    
T  11204385 tagtntgcgtaccagtcaaagcaaacaccttcccaccagttctagcctttttcggctcaggacactgtgaactgatatgaccctctccattgcaattgta 11204286  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| ||||| ||||| |||||    
T  11204285 gcagacaatatccccacgctt 11204265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 29450790 - 29450570
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  29450790 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 29450691  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| || ||  | |||  |||||| ||||  | |||||  |||||||| ||||||||| | ||| |||||||    
T  29450690 gagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatgtgaccttccccattgcagttgta 29450591  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  29450590 acagacaatgtccccacgctt 29450570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 44659119 - 44659022
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  44659119 tcaatagcaataaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 44659022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 7357286 - 7357506
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  7357286 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 7357385  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  || |||| ||| || ||||||||||| ||||  || ||| ||||||| ||||  | |||||  ||||| |||||||| ||  | ||| |||||||    
T  7357386 tagtctgtgtaccagtcaatgcaaacaccttcccactagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgcagttgta 7357485  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| |||||||| || |||||    
T  7357486 gcagacaatgtctccacgctt 7357506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 16150655 - 16150741
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  16150655 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaactaaaggagtactattaaagaaacaagtacatctgataagt 16150741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 16154801 - 16154887
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  16154801 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaactaaaggagtactattaaagaaacaagtacatctgataagt 16154887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 27903409 - 27903490
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  27903409 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacatgtacctctgataagt 27903490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 51604040 - 51603963
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51604040 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 51603963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 53750718 - 53750641
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53750718 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 53750641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 14697119 - 14697247
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| |||| |||| |||||| | || |     |||||||||    
T  14697119 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctataatcaaacgatcctcattc 14697218  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
     ||| |||||||| ||| |||||||||||    
T  14697219 tctgtttgcgtaccagtcaaagcaaacac 14697247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 8050611 - 8050534
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  8050611 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8050534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8389436 - 8389513
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  8389436 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 12479624 - 12479701
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  12479624 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 12479701  T

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Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 14300967 - 14300890
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14300967 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14300890  T

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Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 14683591 - 14683668
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14683591 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14683668  T

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Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16233980 - 16233903
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16233980 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16233903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17092137 - 17092060
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  17092137 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 17092060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19635160 - 19635237
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  19635160 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19635237  T

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Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 19775781 - 19775704
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  19775781 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19775704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 23958771 - 23958848
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  23958771 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23958848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 27714360 - 27714437
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  27714360 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27714437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 18259629 - 18259687
Alignment:
Q  186 aactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  18259629 aactgatatgaccttcctcattgcagttatagcaaacaatgtccccacgcttacaatca 18259687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 13513374 - 13513451
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  13513374 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13513451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 15354291 - 15354234
Alignment:
Q  55 aatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctca 112  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  15354291 aatatcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctca 15354234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16350542 - 16350465
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| ||||||||  |||||| |||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  16350542 agcaataaaacaatgcatagcactagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 16350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 40476064 - 40476141
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  40476064 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 40476141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 16029 - 15946
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| ||| |||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  16029 atcaatagcaataaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 15946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 14162488 - 14162571
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||| ||| |||||||| ||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14162488 atcaagagcaataaaactatgcgtagcaccggtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14162571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 18224434 - 18224376
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  18224434 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaa 18224376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 18604797 - 18604733
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||   | |||||||||||    
T  18604797 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 18604733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 15144878 - 15144825
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    |||| ||||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  15144878 caataaaacaatgcttagcaccagtatcaataatagcaactaaaggagtattat 15144825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 16219206 - 16219289
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| ||||| || ||||||||| |||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  16219206 atcaatagcaataaaacagtgtgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 16219289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 16222526 - 16222609
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| ||||| || ||||||||| |||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  16222526 atcaatagcaataaaacagtgtgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 16222609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 18546873 - 18546794
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctc 95  Q
    ||||| || ||| ||| |||| ||||| ||||||||||||||||||||||||||   ||| || | ||||||||||||||    
T  18546873 atcaagagaaataaaagaatgcgtagctccagtatctataatagcaattaaagggaaattgttgacgaaacaagtacctc 18546794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 14999681 - 14999726
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  14999681 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 14999726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 5e-77; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 21739362 - 21739133
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  21739362 atcaacagcaatgaaacaatgagtagcaccagtatctataatagaaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 21739263  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || | |||||||| ||| |||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || ||  ||||||    
T  21739262 accgtttgcgtaccagtcaaagaaaacagcttgccacctgtcctaaccttcttaggctccgtacactgcgaactgatatgaccttcttcattatagttgt 21739163  T
Q  216 agcaaacaatgtccccccgcttacaatcaa 245  Q
    |||||| ||  ||||| |||||||||||||    
T  21739162 agcaaaaaacatccccacgcttacaatcaa 21739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 21742878 - 21742650
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  21742878 atcaacaacaatgaaacaatgagtagcaccagtgtctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattc 21742779  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||  ||||||    
T  21742778 actgtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgt 21742679  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||  ||||| ||||| ||||||    
T  21742678 agcaaacaacatccccacgcttgcaatca 21742650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 22016071 - 22015843
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  22016071 atcaacatcaatgaaacaatgagtatcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattc 22015972  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | |||| |||||| ||||||||||| |||| |    
T  22015971 actgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttcggctgcgtacactgcaaactaatatgatcttcctcgttgcagttat 22015872  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    | |||||||  ||||| ||||| ||||||    
T  22015871 aacaaacaacatccccacgcttgcaatca 22015843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 24096940 - 24096717
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||      
T  24096940 tcaatagcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagtcagtcctcattag 24096841  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||| || ||||| || ||| ||||||| ||||| |||||||  ||||||||||||||||| |||||| |||||||    
T  24096840 tagtctgcgtaccagtcaatgcaaacactttcccaccggttctagccttcttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttgta 24096741  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||||||||||||||| ||||||||    
T  24096740 gcaaacaatgtccccacgcttaca 24096717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 24 - 244
Target Start/End: Original strand, 19857346 - 19857566
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||   |||||| |    | |||    
T  19857346 caatgaaacaatgagtagcaccagtatctataatagcagttaaaggagtactattaaagaaacaagtacctctaataagtcgatcctcactagtggtttg 19857445  T
Q  124 cgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaaca 223  Q
    ||||| ||| | ||||||||| || ||||  ||| |||||||||| || || ||||||| |||||| |||||||||||||| ||| |||| || ||||||    
T  19857446 cgtaccagtcagagcaaacactttaccactggtcataaccttcttcggttgagtacactgcgaactaatatgaccttcctcattgtagttataacaaaca 19857545  T
Q  224 atgtccccccgcttacaatca 244  Q
    ||||| |||||||||||||||    
T  19857546 atgtctccccgcttacaatca 19857566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 48425938 - 48426158
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  48425938 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 48426037  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  48426038 gagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 48426137  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  48426138 acagacaatgtccccacgctt 48426158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 52988806 - 52989029
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  52988806 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 52988905  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||||||||| || || ||||||||||| || |  | ||| |  |||||||||||||| ||  | ||| |||||||    
T  52988906 tagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacattgtgaactgatatgaccctctccattgcagttgta 52989005  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||||||||| ||||||||    
T  52989006 gcagacaatgtccccacgcttaca 52989029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 20075034 - 20074814
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  20075034 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 20074935  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || ||||||| |||||| || || ||||||||||| ||||  | ||||| |||| |||||||||| ||  | ||| |||||||    
T  20074934 tagtctgcgtaccagtcaatgcaaacatcttgcccccagttctaaccttcttcggctcaggacactgcgaattgatatgaccctctccattgcagttgta 20074835  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| ||||| ||||| |||||    
T  20074834 gcagacaatatccccacgctt 20074814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 20833218 - 20833018
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||   |||||| |    | |||    
T  20833218 caatgaaacaatgagtagcaccagtgtctataatagcaattaaaggaataatattaaagaaacaagtacctctgataagtcgatcctcactagtggtttg 20833119  T
Q  124 cgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaaca 223  Q
    ||||| ||| | ||||||||| || | ||| |||||||||||| | || |||||||||| ||||||||| ||||||||||| ||| |||| || ||||||    
T  20833118 cgtaccagtcagagcaaacactttactaccggtcctaaccttcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaaca 20833019  T
Q  224 a 224  Q
    |    
T  20833018 a 20833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 38910151 - 38909931
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  38910151 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 38910052  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || ||||| ||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  38910051 gagtctgcgtaccagtcaaggcaaaaacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 38909952  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  38909951 acagacaatgtccccacgctt 38909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 31537322 - 31537102
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| |||||      
T  31537322 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcttcattag 31537223  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| | |||||||||||| |||||  | |||  |||||| ||||  | |||||  ||||| ||||| |||||| | ||| |||||||    
T  31537222 gagtctgcgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactaatatggccttccccattgcagttgta 31537123  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  31537122 acagacaatgtccccacgctt 31537102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 37680114 - 37680250
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  37680114 tcaatagcaataaaacaatgaatagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctgtcctcattag 37680213  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacc 153  Q
      |  ||||||| ||| |||||||||||||| |||||    
T  37680214 gagtctgcgtaccagtcaaagcaaacaccttcccacc 37680250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 18710450 - 18710536
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18710450 tcaatagcaatgaaacaatgagtagcaccagtgtttataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 18710536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 20297446 - 20297543
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||||    
T  20297446 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaaccagtacctctgataagtcggtcctcatt 20297543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 20854080 - 20853999
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20854080 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 20853999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 21961135 - 21961315
Alignment:
Q  60 caattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacaccttgccacctgtcct 159  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |  ||||||| ||| |||||||| ||||| ||||| || ||    
T  21961135 caattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaatacctttccaccagttct 21961234  T
Q  160 aaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttaca 240  Q
    ||||||||| ||||  |  |||| ||||||||||||||| ||  | ||| |||||||||| ||||| ||||| ||||||||    
T  21961235 aaccttcttcggctcagggcactgcgaactgatatgaccctctccattgcagttgtagcagacaatatccccacgcttaca 21961315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16347915 - 16347838
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16347915 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16347838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17042335 - 17042258
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  17042335 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 17042258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 51330812 - 51330735
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  51330812 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 51330735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 16379127 - 16379255
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| |||||| |||||||| ||||||||| |||| |||||||||||||||||||||  || |||| |||| ||||||||||| |     ||||| |||    
T  16379127 atcaatagcaataaaacaatgcgtagcaccaatatcaataatagcaattaaaggagtaccatcaaagtaacatgtacctctgatcaaacgatcctcgttc 16379226  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
     ||| |||||||| ||| |||||||||||    
T  16379227 tctgtttgcgtaccagtcaaagcaaacac 16379255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 21842245 - 21842328
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  21842245 atcaaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 21842328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 21833348 - 21833418
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  21833348 aaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 21833418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 33388349 - 33388291
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  33388349 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 33388291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22496576 - 22496499
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  22496576 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 22496499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24785177 - 24785100
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| ||||||| |||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  24785177 agcaataaaacaatgtgtagcacaagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24785100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 41350988 - 41350911
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  41350988 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 41350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 21752080 - 21752163
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||||| |||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  21752080 atcaatagcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 21752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 21045428 - 21045322
Alignment:
Q  38 gtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaag 137  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||| |||| |||||| | || |     ||||||||| ||| |||||||| ||| ||||    
T  21045428 gtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctataatcaaacgatcctcattctctgtttgcgtaccagtcaaag 21045329  T
Q  138 caaacac 144  Q
    |||||||    
T  21045328 caaacac 21045322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 20081696 - 20081619
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||| ||||||||| |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  20081696 agcaataaaacaatgcgtagtaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 20081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 21228876 - 21228799
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||| ||||||   | ||||||||||||||    
T  21228876 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtaatattaatatagcaagtacctctgat 21228799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 22401631 - 22401708
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||| ||||||| ||   |||||||| |||||||    
T  22401631 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtatctctgat 22401708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 19109408 - 19109484
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| ||||||||  |||||||||| || |||||||||| |||||||||||||||||   | ||||||||||||||    
T  19109408 gcaataaaacaatgcatagcaccagtgtcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19109484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 20297565 - 20297668
Alignment:
Q  134 aaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtcccccc 233  Q
    ||| |||||||||| ||||| || ||||||||||| | ||  | |||||| ||||| |||||||||||  | ||| |||||||||| ||||||||||| |    
T  20297565 aaaccaaacaccttcccaccagttctaaccttcttcgactcaggacactatgaactaatatgaccttctccattgcagttgtagcagacaatgtccccac 20297664  T
Q  234 gctt 237  Q
    ||||    
T  20297665 gctt 20297668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 22436031 - 22435976
Alignment:
Q  44 ccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  22436031 ccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 22435976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 20828701 - 20828656
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  20828701 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 20828656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 20928104 - 20928149
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  20928104 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 20928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 12007 - 12235
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  12007 atcaacagcaatgaaacaatgagtagcgccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattc 12106  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    || | |||||||| ||| || ||||| |||||||||||||||| |||||||||||||||||||||||  ||||| ||||| ||||| || ||  ||||||    
T  12107 acagtttgcgtaccagtcaacgcaaataccttgccacctgtccgaaccttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagttgt 12206  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| | ||| ||||||    
T  12207 agcaaacaatatccccacacttgcaatca 12235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 137; Significance: 1e-71; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 29671 - 29899
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  29671 atcaacagcaatcaaacattgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 29770  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    ||||  ||||||| ||| |||||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||||||||| ||| |  | |    
T  29771 actgtctgcgtaccagtcaaagcaaacaccttaccacctgtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcaaatat 29870  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    | ||||| |||||||| | ||||||||||    
T  29871 aacaaacgatgtccccacacttacaatca 29899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 64853 - 64773
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  64853 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 64773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 49431 - 49351
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49431 agcaatgaaacaatgagtagctccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 49351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 58465 - 58385
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  58465 agcaatgaaacaatgagtagctccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 58385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 1140 - 912
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  1140 atcaacaacaatgaaataatgagtagcaccagtagctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtctgtcctcatta 1041  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
      || ||||||||  || |||||||||||||| ||||| |||||||||||||| || |||||||||| ||||||||||||||||||||| ||| |||| |    
T  1040 gttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcagttat 941  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |  ||||||||||||| ||||||||||||    
T  940 aataaacaatgtccccacgcttacaatca 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 1072 - 844
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| |||||| |||||||||||||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||  |||||||||     
T  1072 atcaatagcaataaaacaatgagtagcactagtgtctataatagcaattaagggagtactattaaagaaacaagtacctttgataagtctgtcctcatta 973  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
      || ||||||||  || |||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||| |    
T  972 gttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttctttggctgcgtacactgcgaactgatatgtccttcctcgttgcagttat 873  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    | |||||||||||||| ||||||||||||    
T  872 aacaaacaatgtccccacgcttacaatca 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 36986 - 37214
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||| |||||     
T  36986 atcaacatcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctatgataagtctgtcttcatta 37085  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
      || ||||||||  || |||| ||||||||| ||||| |||||||||||||| |||||||||||||  |||||||||||||||||||| ||| |||| |    
T  37086 gttgtttgcgtaccggtcaaagaaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttat 37185  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| | ||||||||||    
T  37186 agcaaacaatatccccacacttacaatca 37214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 42753 - 42972
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||||| |||| |||    
T  42753 caatgaaacaatgagtagcaccagtatctataatagcaaataaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtttg 42852  T
Q  124 cgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaaca 223  Q
    || || ||| |||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| |||||||||||  | ||  | ||||||||||||    
T  42853 cgcaccagtgaaagcaaacaccttgccacctgtcctaatcttcttaggttgcgtacactgcgaactaatatgaccttctgcattacaattgtagcaaaca 42952  T
Q  224 atgtccccccgcttacaatc 243  Q
    |  ||||| |||||| ||||    
T  42953 acatccccacgcttaaaatc 42972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 50596 - 50519
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  50596 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 50519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 23078334 - 23078117
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgatt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |  |    
T  23078334 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtct 23078235  T
Q  123 gcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaac 222  Q
    |||||| ||| || |||||||| || ||||| |||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||| |||||||||||||    
T  23078234 gcgtactagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtagcaaac 23078135  T
Q  223 aatgtccccccgcttaca 240  Q
    |||||| || ||||||||    
T  23078134 aatgtctccacgcttaca 23078117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 23563603 - 23563392
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  23563603 tcaatagcaattaaacattgagtagcaccagtttctataatatcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 23563504  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
     || ||||||||  || |||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||| ||| |||| ||    
T  23563503 ttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcgtacactgcgaactaatatgaccttcctcattgcagttata 23563404  T
Q  217 gcaaacaatgtc 228  Q
     |||||| ||||    
T  23563403 acaaacattgtc 23563392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 20345215 - 20345435
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  20345215 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 20345314  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| |||||||||||| ||||| ||||| || ||| ||||||| ||||  | |||||  ||||| |||||||||||| | ||| |||||||    
T  20345315 tagtctgcgtaccagttaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaactaatatgaccttccccattgcagttgta 20345414  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| ||||||||||| |||||    
T  20345415 gcagacaatgtccccacgctt 20345435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 21561461 - 21561271
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||     
T  21561461 atcaacagcaatgaaacaatgtgtagcaccagtatcaataatagcaattaaagaagtactattaaagaaacaagtacctctgataagtcggtcctcatta 21561362  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaa-ccttcttaggctgcgtacactacgaactgatatgaccttcctcgt 206  Q
    |||| |||| ||| ||| || ||||||||||| ||||||| ||||| |||||||| ||| | | |||| |||||| | ||||||||| ||||    
T  21561361 actgtttgcataccagtcaatgcaaacacctttccacctg-cctaagccttcttatgcttcctgcactgcgaactaagatgaccttcttcgt 21561271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 21983613 - 21983423
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  21983613 atcaacagcaatgaaacaatgtgtagcaccagtatcaataatagtaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 21983514  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgt 206  Q
    ||||  ||||||  ||| || ||||||||||| ||||||| |  | |||||||||||| | | |||| |||||| | ||||||||| ||||    
T  21983513 actgtctgcgtaacagtcaatgcaaacacctttccacctgcctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgt 21983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 22505612 - 22505835
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||||      
T  22505612 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcattgg 22505711  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||||||||| || || ||||||||||| || |  | |||||  |||||||| ||||| ||  | ||| |||||||    
T  22505712 tagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaactgatgtgaccctctccattgcagttgta 22505811  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||||||||| ||||||||    
T  22505812 gcagacaatgtccccacgcttaca 22505835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 14884426 - 14884206
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  14884426 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 14884327  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| ||||||||||| || |||||  | |||  |||| | ||||  | |||||  ||||| |||||||||||| | ||| |||||||    
T  14884326 gagtctgcgtaccagtcaaagcaaacactttcccaccaattctagtcttcctcggctcaggacactgtgaactaatatgaccttccccattgcagttgta 14884227  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  14884226 acagacaatgtccccacgctt 14884206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 20824391 - 20824570
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||    |      
T  20824391 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcattggtagtc 20824490  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    ||||||| ||| |||||||| || || || || ||||| ||||||||||| ||||| |||| |||||| || ||||||||    
T  20824491 tgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgcgtgcactgcgaactaatgtgaccttc 20824570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 25851005 - 25851225
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||   |||||||||      
T  25851005 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaatgagtactattaaagaaacaagtacctctgataagacggtcctcattgg 25851104  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||| ||||| ||||| || ||| ||||||| ||||  | |||||  ||||| |||||||| ||  | ||| |||||||    
T  25851105 tagtctgcgtaccagtcaaagcaaataccttcccaccagttctagccttcttcggctcaggacactgtgaactaatatgaccctctccattgcagttgta 25851204  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| |||||||| || |||||    
T  25851205 gcagacaatgtctccacgctt 25851225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 20778851 - 20778932
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20778851 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 20778932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 22464888 - 22464969
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22464888 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 22464969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17266764 - 17266687
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  17266764 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctttgat 17266687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 28892372 - 28892291
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  28892372 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtaccattaaagaaacaagtacctctgataagt 28892291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 21631835 - 21631637
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||| ||| |||| |||| |||||||| || |    ||||||||||    
T  21631835 atcaacagcaataaaacaatgcgtagcaccagtattaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaccggtcctcattc 21631736  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttg 214  Q
    ||||  || |||| ||| ||||||||||| || ||||  |||  | |||||||||||| | | |||| |||||  ||||||||||| || ||| |||||    
T  21631735 actgtctgtgtaccagtcaaagcaaacactttcccactagtctgagccttcttaggcttcttgcactgcgaaccaatatgaccttcttcattgcagttg 21631637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 43122516 - 43122589
Alignment:
Q  133 taaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgt 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||| ||||| ||||    
T  43122516 taaagcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcgt 43122589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 14997175 - 14997092
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14997175 atcaaaagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14997092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 16359458 - 16359535
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16359458 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16359535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19772916 - 19772993
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  19772916 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19772993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 21410084 - 21410217
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||| ||||||| |||||||  ||||||||||||||||| |||| |||||| |||||| |||||| |||||| ||||||||||| ||    |||||||||    
T  21410084 atcagcagcaataaaacaatatgtagcaccagtatctatgatagtaattaagggagtactattaatgaaacatgtacctctgatcagacgatcctcattc 21410183  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgc 149  Q
     |||  |  |||| || |||||||||||||||||    
T  21410184 tctgtctaagtaccagctaaagcaaacaccttgc 21410217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22330317 - 22330240
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22330317 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22330240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 27521362 - 27521439
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  27521362 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27521439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 27613312 - 27613389
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  27613312 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 27665920 - 27665843
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  27665920 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27665843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 27682830 - 27682753
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  27682830 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 27682753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 29473503 - 29473426
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  29473503 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 29473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 34569450 - 34569527
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  34569450 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 34569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 37288926 - 37288849
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  37288926 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 37288849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 40711736 - 40711813
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  40711736 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaagatagcaagtacctctgat 40711813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 41773798 - 41773875
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  41773798 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 41773875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 25429371 - 25429454
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||||||| ||   ||||||||||||||||    
T  25429371 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgat 25429454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18782070 - 18782147
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  18782070 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 18782147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 21882730 - 21882807
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||| ||| |||||||||||||||||   | ||||||||||||||    
T  21882730 agcaataaaacaatgcgtagcaccagtatcaataataccaactaaaggagtattattaatatagcaagtacctctgat 21882807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 23526007 - 23526084
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| || ||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  23526007 agcaataaaacaatgtgttgcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 21332422 - 21332339
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  21332422 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 21332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 26736163 - 26736080
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| || ||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  26736163 atcaatagaaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 26736080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 20803553 - 20803611
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| ||||||| |||||| |||||||||| |||||||||||||||||    
T  20803553 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggagtattattaa 20803611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 22350875 - 22350952
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||||||| |||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22350875 agcaataaagcaatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22350952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 22137624 - 22137701
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||| ||||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22137624 agcaataaagcaatgcgtatcaccattatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22137701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 23460943 - 23461004
Alignment:
Q  38 gtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  23460943 gtagcaccaatatcaataatagcaactaaaggagtattattaatacagcaagtacctctgat 23461004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 23508633 - 23508678
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  23508633 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 23508678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 24584159 - 24584204
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  24584159 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 24584204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 43676 - 43448
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  43676 atcaacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattc 43577  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| ||||||||| |||| | | |||| ||| || |||||||| || || |   | || |    
T  43576 actgtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttcttgcactgcgagctaatatgaccctcttcatcacaattat 43477  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||  ||||| ||||||||||||    
T  43476 agcaaacaacatccccacgcttacaatca 43448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 19455906 - 19456133
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||| |      
T  19455906 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagaaaatcctcaatag 19456005  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || |||||||||||||| |||||||||||||||||| |||| ||    
T  19456006 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctttggttgagtacactacgaactaatatgaccttcctcgttgcagttata 19456105  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||||| || ||||||||||||    
T  19456106 gcaaacaatgtctccacgcttacaatca 19456133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 19466051 - 19466278
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||| |      
T  19466051 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagaaaatcctcaatag 19466150  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || |||||||||||||| |||||||||||||||||| |||| ||    
T  19466151 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctttggttgagtacactacgaactaatatgaccttcctcgttgcagttata 19466250  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||||| || ||||||||||||    
T  19466251 gcaaacaatgtctccacgcttacaatca 19466278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 21474482 - 21474637
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||     
T  21474482 atcaacaacaatcaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctgataagtcggtcctcatta 21474581  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttagg 171  Q
       | |||||||| ||| ||||||||||||||||||||||||  | ||||||||||    
T  21474582 gaagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttagg 21474637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 18797578 - 18797800
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |    |      
T  18797578 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtagtc 18797677  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| || |||||||| || ||||| || ||||||||||| || || || ||||  ||||||||||| ||||| || ||| |||| |||||||    
T  18797678 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgcagttatagcaaa 18797777  T
Q  222 caatgtccccccgcttacaatca 244  Q
    ||| ||| || ||||| ||||||    
T  18797778 caacgtcaccacgcttgcaatca 18797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 19437885 - 19438063
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||| | |      
T  19437885 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatccttactag 19437984  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatg 195  Q
      | |||||||| ||| | |||||||||||| ||||  |||||||||||||| ||||| || |||| ||||||||||||    
T  19437985 tggtttgcgtaccagtcagagcaaacaccttaccactagtcctaaccttcttcggctgtgtgcactgcgaactgatatg 19438063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 19486693 - 19486503
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  19486693 atcaacagcaatgaaacaatgtgtagcaccagtatcaataataacaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 19486594  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgt 206  Q
    | || |||||||| ||| || ||||||| ||| ||||||| |  | |||||||||||| | | |||| |||||| | ||||||||| ||||    
T  19486593 aatgtttgcgtaccagtcaatgcaaacaactttccacctgcctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgt 19486503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 24515805 - 24515605
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |    | |||    
T  24515805 caatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactagtggtttg 24515706  T
Q  124 cgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaaca 223  Q
    ||||| ||| | || |||||| || ||||| ||||||||| || | || |||||||||| ||||||||| ||||||||||| ||| |||| || ||||||    
T  24515705 cgtaccagtcagagaaaacacgttaccaccggtcctaaccgtcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaaca 24515606  T
Q  224 a 224  Q
    |    
T  24515605 a 24515605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 10466246 - 10466023
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  10466246 tcaatagcaataaaacaatgagtagcaacagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 10466147  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  |||||||   | ||  ||||||| || || || ||||| |||||||| ||||| |||||||  ||||| ||||||||||| || ||| |||| ||    
T  10466146 tagtctgcgtaccgatcaatacaaacactttccctccggtcctgaccttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttata 10466047  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||||||||| ||||||||    
T  10466046 gcagacaatgtccccacgcttaca 10466023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 25770726 - 25770881
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| |||     
T  25770726 atcaacaacaatgaaacaatgaatagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtccttatta 25770825  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttagg 171  Q
    || | |||| ||| ||| |||| |||||||||||||||||||  | ||||||||||    
T  25770826 acagtttgcttactagtcaaaggaaacaccttgccacctgtcagagccttcttagg 25770881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 34642979 - 34642757
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||  || |||||||||||||||||||||||||||||   || |||||| | | |    
T  34642979 agcaatgaaacaatgtgtagcaccagtgtctataatagcgattaaagggatactattaaagaaacaagtacctctgataagtctatcttcattcgcggtt 34642880  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||  || |||||||| || ||||| |||||||||||||| || || || ||||  |||||||||||||| ||| | ||| |||||||||| |    
T  34642879 tgcgtaccagccaaggcaaacactttcccaccggtcctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcagttgtagcata 34642780  T
Q  222 caatgtccccccgcttacaatca 244  Q
    |||| || || || |||||||||    
T  34642779 caatatcaccacgtttacaatca 34642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 14377314 - 14377089
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||||||| |      
T  14377314 tcaatagcaatgaaacaatgagtaacaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcggtcctcactag 14377215  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||| || ||||| || ||||||||||| ||||| ||||| | ||||||||| || || || || ||| |||| ||    
T  14377214 tagtctgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgcagttata 14377115  T
Q  217 gcaaacaatgtccccccgcttacaat 242  Q
     |||||||  || || ||||||||||    
T  14377114 acaaacaacatcaccacgcttacaat 14377089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 24367283 - 24367419
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  24367283 tcaatagcaataaaacaatgagtagcaccagtattaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 24367382  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacc 153  Q
      |  ||||||| ||| |||||||||||||| |||||    
T  24367383 gagtctgcgtaccagtcaaagcaaacaccttcccacc 24367419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 15462224 - 15462305
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15462224 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 15462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 21567384 - 21567214
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||  |||| ||||||||||||||||||||||||||||   ||||| |||    |      
T  21567384 agcaatgaaacaatgagtagtaccagtgtctataatagcaattgaataagtactattaaagaaacaagtacctctgataagcatgtccttattagtagtc 21567285  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgat 192  Q
    ||||||| ||| ||||||||||| || ||||| || |||| |||||| ||||| || ||||  ||||||||    
T  21567284 tgcgtaccagtcaaagcaaacacttttccaccggttctaatcttctttggctgagtgcactgggaactgat 21567214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16925033 - 16924956
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  16925033 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 16924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 2872195 - 2872118
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  2872195 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 2872118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 16574778 - 16574855
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16574778 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16574855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 16620602 - 16620525
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16620602 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 29589832 - 29589755
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  29589832 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 29589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 30678417 - 30678297
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||| |||||| | ||||||| | |||| |||||||||||||||| |||| ||||||||||||| ||||||||||| |     ||||||||||||| |    
T  30678417 agcaataaaacaacgcgtagcacaaatatcaataatagcaattaaagaagtactattaaagaaacatgtacctctgatcaaccgatcctcattcactgtt 30678318  T
Q  122 tgcgtacgagttaaagcaaac 142  Q
    || |||| ||| |||||||||    
T  30678317 tgtgtaccagtcaaagcaaac 30678297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 5836627 - 5836544
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  5836627 atcaaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 5836544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 27190324 - 27190398
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | |||||||||||    
T  27190324 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27190398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 27258916 - 27258842
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | |||||||||||    
T  27258916 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27258842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 28312518 - 28312595
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  28312518 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 28312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 22829769 - 22829702
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22829769 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22829702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 23081305 - 23081388
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  23081305 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 23081388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 22436757 - 22436834
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| ||||||| |||||| |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  22436757 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 22436834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 24293159 - 24293098
Alignment:
Q  38 gtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  24293159 gtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24293098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 27559362 - 27559285
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| ||||||||| |||| ||||||||||  || |||||||||||||   ||||||||||||||||    
T  27559362 agcaataaaacaatgcgtagcaccattatcaataatagcaacaaatggagtattattaatataacaagtacctctgat 27559285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 28260590 - 28260513
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||| ||||||||||   | ||||||||||||||    
T  28260590 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgat 28260513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 28285326 - 28285403
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||| ||||||||||   | ||||||||||||||    
T  28285326 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgat 28285403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 28339339 - 28339262
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||| ||||||||||   | ||||||||||||||    
T  28339339 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgat 28339262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 23085224 - 23085096
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||| |||||||| ||||||||||| || ||||||| || |||||||||| ||| |||  |||| |||||||| || | |  ||||||||||    
T  23085224 atcaacaacaataaaacaatgtgtagcaccagtttcaataatagaaactaaaggagtactatcaaaataacatgtacctctaatcaatcggtcctcattc 23085125  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
     |||  ||| ||| ||| |||||||||||    
T  23085124 tctgtctgcatactagtcaaagcaaacac 23085096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 18182749 - 18182686
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||| ||||||||| |||| ||||||||||||||||||||| ||| |||| |||| ||||||||    
T  18182749 aatgtgtagcaccaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctct 18182686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 18405343 - 18405260
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| ||||||||  ||||||||||||| |||||||||  |||||| ||| ||| |||  ||||||||||||||||    
T  18405343 atcaaaagcaataaaacaatgcatagcaccagtatcaataatagcagctaaaggtgtactatcaaaataacaagtacctctgat 18405260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 19867575 - 19867630
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    |||||| |||||||| |||||||||||||| ||||||| || ||||||||||||||    
T  19867575 agcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagtattat 19867630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 25115440 - 25115517
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||| |||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  25115440 agcaataaagcaatgcgtagtaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 25115517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 16379755 - 16379710
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  16379755 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 16379710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 16647351 - 16647306
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  16647351 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 16647306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 5401 - 5178
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||      
T  5401 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcatttg 5302  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||| || ||||| |||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  5301 tagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgta 5202  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| |||||||| || ||||||||    
T  5201 gcagacaatgtctccacgcttaca 5178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 1567 - 1344
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |      
T  1567 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactag 1468  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||| | | ||| || || ||||| || |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |  ||||    
T  1467 tagtctgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgta 1368  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||||||||| ||||| ||||||||    
T  1367 gcaaacaatatccccacgcttaca 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 7792 - 8015
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |      
T  7792 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactag 7891  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||| | | ||| || || ||||| || |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |  ||||    
T  7892 tagtctgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgta 7991  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||||||||| ||||| ||||||||    
T  7992 gcaaacaatatccccacgcttaca 8015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 21928512 - 21928669
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| ||||||    
T  21928512 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcttcattc 21928611  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || | |||| ||| ||| ||||||||||||||||||||||||| ||||||||| ||||    
T  21928612 acagtttgcttactagtcaaagcaaacaccttgccacctgtccgaaccttcttgggct 21928669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 31414223 - 31414005
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |      
T  31414223 agcaatgaaacaatgagtagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtc 31414124  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||| ||| ||| || |||||||| || ||||| || ||| ||||||| | ||| |||||||  ||||||||||||||||| |||||| ||||||||||||    
T  31414123 tgcataccagtcaatgcaaacactttcccaccggttctagccttcttcgactgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaa 31414024  T
Q  222 caatgtccccccgcttaca 240  Q
    |||||||||| ||||||||    
T  31414023 caatgtccccacgcttaca 31414005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 19985264 - 19985421
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||    
T  19985264 atcaacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtccttattc 19985363  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || |  ||||||| ||| || ||||| |||||||||||||||| ||||||||||||||    
T  19985364 acagtctgcgtactagtcaatgcaaataccttgccacctgtccgaaccttcttaggct 19985421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 22373953 - 22374138
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  22373953 atcaacatcaatgaaactatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 22374052  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    || | ||| |||| ||| |||||||||||||||||||||||   | |||||||||||| | | |||| ||| || |||||||||||    
T  22374053 acagtttgggtaccagtcaaagcaaacaccttgccacctgttagagccttcttaggcttcctgcactgcgagctaatatgaccttc 22374138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 22027976 - 22027749
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  22027976 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 22027877  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  |||||||  || || |||||||| || ||||| || ||||||||||| ||||| || ||||  ||||||||||| || || || ||| |||| ||    
T  22027876 tagtctgcgtaccggtcaatgcaaacacttttccaccggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgtagttata 22027777  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||||| ||| |||| ||||||||||    
T  22027776 gcaaacaacgtctcccctcttacaatca 22027749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 20391173 - 20391360
Alignment:
Q  19 aacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcact 118  Q
    |||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||    
T  20391173 aacagcaatgaatcaatgtgtagcaccagtatcaataatagaaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaact 20391272  T
Q  119 gattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgt 206  Q
    |  ||||||| ||| || ||||||||||| |||||||||  | |||||||||||| | | |||| |||||| | ||||||||| ||||    
T  20391273 gtctgcgtaccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgt 20391360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 29301117 - 29300899
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |      
T  29301117 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatttgtagtc 29301018  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    |||||||  || || | |||||| || |||||  ||||| ||||||| ||||| |||||||  ||||||||||||||||| || ||| |||| ||| | |    
T  29301017 tgcgtacccgtcaatgaaaacactttcccaccgatcctagccttcttcggctgagtacactgagaactgatatgaccttcttcattgcagttatagtaga 29300918  T
Q  222 caatgtccccccgcttaca 240  Q
    |||||||||| ||||||||    
T  29300917 caatgtccccacgcttaca 29300899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 16268920 - 16268700
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  16268920 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 16268821  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| ||||||||||| || ||||| || ||| ||||||| ||||  | |||||  |||||||||||||| ||  | ||| | |||||    
T  16268820 tagtctgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcaggacactgtgaactgatatgaccctctccattgcaattgta 16268721  T
Q  217 gcaaacaatgtccccccgctt 237  Q
    ||| ||||| ||||| |||||    
T  16268720 gcagacaatatccccacgctt 16268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 28983996 - 28984216
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  28983996 tcaatagcaataaaacagtgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 28984095  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  || |||| ||| | |||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  28984096 gagtctgtgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 28984195  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  28984196 acagacaatgtccccacgctt 28984216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 22053953 - 22054144
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||    |      
T  22053953 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcattagtagtc 22054052  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagtt 213  Q
    ||||||| ||| ||||||||||| || ||||| || ||| ||||||| ||||| || ||||  | ||||||||| || || |||||| ||||    
T  22054053 tgcgtaccagtcaaagcaaacacttttccaccagttctatccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagtt 22054144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 28989215 - 28989312
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  28989215 tcaatagcaataaaacagtgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 28989312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 6607049 - 6606981
Alignment:
Q  133 taaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||| |||||    
T  6607049 taaagcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttc 6606981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17671713 - 17671636
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  17671713 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 17671636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19115490 - 19115567
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  19115490 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19115567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 20015954 - 20015877
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  20015954 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 20015877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 22031193 - 22031270
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  22031193 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 22031270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22117866 - 22117789
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22117866 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22117789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22126650 - 22126573
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22126650 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22126573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 32603235 - 32603312
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  32603235 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 32603312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 22375143 - 22375071
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| |||| |||| ||||||||    
T  22375143 caataaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctct 22375071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18859667 - 18859744
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  18859667 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 18859744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 19481763 - 19481686
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  19481763 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 19481686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19981057 - 19981134
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  19981057 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 19981134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 30310835 - 30310758
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  30310835 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 30310758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 22042927 - 22042994
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22042927 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 22421589 - 22421506
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||  |||||| ||| ||| |||  ||||||||||||||||    
T  22421589 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcagctaaaggtgtactatcaaaataacaagtacctctgat 22421506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 21391545 - 21391475
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||| |||||||||||||| |||||||||| |||||| ||||||| ||   | ||||||||||||||    
T  21391545 aaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 21391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 21780871 - 21780801
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||| |||||||||||||| |||||||||| |||||| ||||||| ||   | ||||||||||||||    
T  21780871 aaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 21780801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 15536473 - 15536550
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| ||| ||||||| |||||   | ||||||||||||||    
T  15536473 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaacggagtatcattaatatagcaagtacctctgat 15536550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 21164229 - 21164152
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||| ||||||| |||||||||| ||||||||||| || ||   |||| |||||||||||    
T  21164229 agcaataaaacaatgcgtagcatcagtatcaataatagcaactaaaggagtatgatcaatataacatgtacctctgat 21164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 21254035 - 21254112
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| ||| |||| |||||||||||||| |||||||||| |||||| ||||||| ||   | ||||||||||||||    
T  21254035 agcaataaaataatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 21254112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22129308 - 22129231
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||| |||||||||| |||||||||| ||||| |||||||||||   | ||||||||||||||    
T  22129308 agcaataaagcaatgtgtaacaccagtatcaataatagcaactaaagcagtattattaatctagcaagtacctctgat 22129231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 22523630 - 22523683
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaagg 69  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| ||||||    
T  22523630 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaagg 22523683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 27357621 - 27357665
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagca 61  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||    
T  27357621 tcaatagcaataaaacaatgagtagcaccagtatcaataatagca 27357665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 20650035 - 20649990
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  20650035 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 20649990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 21786039 - 21785999
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaagg 69  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  21786039 aaacaatgcgtagcaccagtatcaataatagcaactaaagg 21785999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 240
Target Start/End: Original strand, 11033 - 11248
Alignment:
Q  25 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| |  |  |||    
T  11033 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaatagtctgc 11132  T
Q  125 gtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaa 224  Q
    |||| ||| || ||||||||||| || || |||||| ||||||| ||||| |||||||  || ||||||||||| || || ||| |||||||||| ||||    
T  11133 gtaccagtcaacgcaaacaccttccctccggtcctagccttcttcggctgagtacactgtgagctgatatgaccctcttcattgcagttgtagcagacaa 11232  T
Q  225 tgtccccccgcttaca 240  Q
    ||||||| ||||||||    
T  11233 tgtccccacgcttaca 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 231
Target Start/End: Complemental strand, 30575 - 30368
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||   ||  ||    
T  30575 caatgaaacaatgagtagcaccaatatctataatagcaattaaaggagtacttttaaagaaacaagtacctctgataagtcggtcctcatttgttgtctg 30476  T
Q  124 cgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaaca 223  Q
    ||||| ||| || |||||||| || ||||| |||||| ||||||| ||||| ||||||| |||||||||||||||||| || ||| |||||||||| |||    
T  30475 cgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgagtacacttcgaactgatatgaccttcttctttgcagttgtagcataca 30376  T
Q  224 atgtcccc 231  Q
    ||||||||    
T  30375 atgtcccc 30368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 2208 - 1981
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    | |||| |      
T  2208 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaacaagtacctctgataagcatcttctcactag 2109  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || ||||||| ||||||||||||||||||||| ||| |||| ||    
T  2108 tgggttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttata 2009  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||||| ||| |||||||||||||||    
T  2008 gcaaacaacgtctccccgcttacaatca 1981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 70425 - 70506
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  70425 agcaaagaaacaatgagtaacaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 70506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 1768 - 1925
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||||||    
T  1768 atcaacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcattc 1867  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || | |||||||| ||| ||||||||||||||||||||||||| || |||||| ||||    
T  1868 accgtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaacttcttgggct 1925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 8662 - 8889
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  8662 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 8761  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||| || ||||| || ||||||||||| || || || |||| |||||||||||| ||||| |||||| |||||||    
T  8762 tagtatgcgtaccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgcagttgta 8861  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||||||||| || ||||| ||||||    
T  8862 gcaaacaatgtcaccacgcttgcaatca 8889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 5651 - 5804
Alignment:
Q  18 caacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcac 117  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  5651 caacaacaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcac 5750  T
Q  118 tgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttagg 171  Q
    || |||||||| | ||| |||||||||| ||||||| || | ||||||||||||    
T  5751 tgtttgcgtaccaattagagcaaacaccatgccaccggttcgaaccttcttagg 5804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 29574 - 29759
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||     
T  29574 atcaactgcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatta 29673  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    || | |||||||| ||| | ||||||||||||||||||||||  | |||||||||||| | | |||| ||| || |||||||||||    
T  29674 acagtttgcgtaccagtcagagcaaacaccttgccacctgtcagagccttcttaggcttcctgcactgcgagctaatatgaccttc 29759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 1125 - 901
Alignment:
Q  25 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgc 124  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| | |   || ||||    
T  1125 aatgaaacaatgagtaacactagtgtctataatagcaattaaaggcgtattattaaagaaacaagtacctctgataagtctgtccttactagttgtttgc 1026  T
Q  125 gtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactac-----gaactgatatgaccttcctcgttgaagttgtagca 219  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||| || || ||||||| |     |||||||| ||||||||||||||| |||| |||||    
T  1025 gtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgtgtacactgcgaactgaactgatgtgaccttcctcgttgcagttatagca 926  T
Q  220 aacaatgtccccccgcttacaatca 244  Q
    ||||||||| || ||||||||||||    
T  925 aacaatgtcaccacgcttacaatca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 9277 - 9052
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  9277 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 9178  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| |  || ||||||| |||| |||| ||||||||||| ||| |||| ||    
T  9177 tggtttgcgtaccagtcagagcaaacacattaccaccggtcctaaccttcttcgtttgtgtacactgcgaattgatttgaccttcctcattgcagttata 9078  T
Q  217 gcaaacaatgtccccccgcttacaat 242  Q
    ||||||||  || |||||||||||||    
T  9077 gcaaacaacatctccccgcttacaat 9052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 102; Significance: 9e-51; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 39589 - 39364
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  39589 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 39490  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| |  || ||||||| |||||||||| |||||||||| ||| |||| ||    
T  39489 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcgattgtgtacactgcgaactgatacgaccttcctcattgcagttata 39390  T
Q  217 gcaaacaatgtccccccgcttacaat 242  Q
    ||||||||  || |||||||||||||    
T  39389 gcaaacaacatctccccgcttacaat 39364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 14477 - 14554
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||||||||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  14477 agcaataaagcaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 14554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 4962 - 5015
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaagg 69  Q
    ||||| || ||| |||||||| |||||||||||||| |||||||||| ||||||    
T  4962 atcaatagaaataaaacaatgtgtagcaccagtatcaataatagcaactaaagg 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 10028 - 9800
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||   |||||| |      
T  10028 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcgatcctcactag 9929  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | |||||||||||| ||||| |||||||||||||| || |||||||| |  ||||| ||||| || ||||| ||| |||| ||    
T  9928 tggtttgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggttgcgtacattgtgaacttatatggccctcctcattgcagttata 9829  T
Q  217 gcaaacaatgtccccccgcttacaatcaa 245  Q
    ||||||||  || ||||||||||||||||    
T  9828 gcaaacaacatctccccgcttacaatcaa 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 24202 - 24119
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||| |||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  24202 atcaatagcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 24119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 19225 - 19023
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||   ||||||| |      
T  19225 tcaatagcaatgaaacaatgagtagcaccagtatctataatagtaattaaaggagtactattaaagaaacaagcacctctgataagcctgtcctcactag 19126  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || ||||||| ||||||||||||||||||||| ||| |||| ||    
T  19125 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttata 19026  T
Q  217 gca 219  Q
    |||    
T  19025 gca 19023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 5858 - 6080
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||   ||||||  |    | |    
T  5858 agcaatgaaacaatgagtagcactagtatctataataacaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctcgctagtggtt 5957  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||  ||||| ||||||||| || ||||| |||||||||||||| || || |||||||  ||||| ||||| |||||||||||| |||| || ||||    
T  5958 tgcgtatcagttagagcaaacactttaccaccggtcctaaccttcttcggttgtgtacactgtgaactaatatgtccttcctcgttgcagttataacaaa 6057  T
Q  222 caatgtccccccgcttacaatca 244  Q
    |||||||||| ||||| ||||||    
T  6058 caatgtccccacgcttgcaatca 6080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 41365 - 41236
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||| ||||||| |||||||| |||||||||||||||||||||| |||||| |||||| |||||| | |||| ||||||||||| || |  |||||||||    
T  41365 atcagcagcaataaaacaatgtgtagcaccagtatctataatagtaattaagggagtactattaatgtaacatgtacctctgatcagatgatcctcattc 41266  T
Q  116 actgattgcgtacgagttaaagcaaacacc 145  Q
     |||  || |||| || |||||||||||||    
T  41265 gctgtctgagtaccagctaaagcaaacacc 41236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 20862 - 21090
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  20862 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtagatcctcaatag 20961  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| || ||||||||||| || || |||||||  ||||||||| | || ||||| ||| |||| ||    
T  20962 tggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgtacactgtgaactgatacggccctcctcattgcagttata 21061  T
Q  217 gcaaacaatgtccccccgcttacaatcaa 245  Q
    |||||  ||||| ||||||||||||||||    
T  21062 gcaaattatgtctccccgcttacaatcaa 21090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 738 - 536
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||| ||||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |      
T  738 agcaattaaacattgtgtagcaccagtttctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtc 639  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    || |||| ||| || |||||||| || ||| | || ||||||||||| ||||| || ||||  ||||||||||| || || || ||| |||| |||||||    
T  638 tgtgtaccagtcaatgcaaacactttcccatcggttctaaccttcttcggctgtgtgcactgtgaactgatatggccctcttcattgcagttatagcaaa 539  T
Q  222 caa 224  Q
    |||    
T  538 caa 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 20848239 - 20848459
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  20848239 tcaatagcaataaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 20848338  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| |||||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  20848339 gagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 20848438  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  20848439 acagacaatgtccccacgctt 20848459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 23274243 - 23274470
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  23274243 tcaatagcaatgaaacaatgagtagcaccggtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 23274342  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||| ||| ||| | ||||||||| || ||||| |||||||||||||| || || || ||||  ||||||||||| || ||||| ||| |||| ||    
T  23274343 tggtttgcataccagtcagagcaaacactttaccaccagtcctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttata 23274442  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    |||||| ||||| |||||||||||||||    
T  23274443 gcaaactatgtctccccgcttacaatca 23274470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 19716810 - 19716603
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||| |      
T  19716810 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcactag 19716711  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||| || ||||| || ||||||||||| ||||| || |||| |||||||||||| || || | |||| |||| ||    
T  19716710 tagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttata 19716611  T
Q  217 gcaaacaa 224  Q
     |||||||    
T  19716610 acaaacaa 19716603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 224
Target Start/End: Complemental strand, 19721365 - 19721166
Alignment:
Q  25 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||| |    |  |||    
T  19721365 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcactagtagtctgc 19721266  T
Q  125 gtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaa 224  Q
    |||| ||| || |||||||| || ||||| || ||||||||||| ||||| || |||| |||||||||||| || || | |||| |||| || |||||||    
T  19721265 gtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaacaa 19721166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 23113372 - 23113528
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |     
T  23113372 atcaacaacaatgaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctttgataag-tcgtcctcaata 23113470  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    ||||  || || | ||| || ||||||||||| |||||||||  | ||||||||||||    
T  23113471 actgcctgtgttccagtcaatgcaaacacctttccacctgtctgagccttcttaggct 23113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 23097806 - 23097636
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||||   |||||||||    |      
T  23097806 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaatcaagtacctcttataagcctgtcctcattagtagtc 23097707  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgat 192  Q
    ||||||| ||| |||||||||||||| ||||| || |||| |||||| ||||| || ||||  ||||||||    
T  23097706 tgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggctgagtgcactgtgaactgat 23097636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 12577008 - 12577085
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  12577008 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggaatactattaaagaaacaagtacctctgat 12577085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 30208714 - 30208578
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||| ||||||| |||||||| |||||||||||||||||||||| |||||| |||||| |||||| |||||| |||||| |||| || |  |||||||||    
T  30208714 atcagcagcaataaaacaatgtgtagcaccagtatctataatagtaattaagggagtactattaatgaaacatgtacctttgatcagatgatcctcattc 30208615  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccac 152  Q
    ||||  || |||| || |||||| | |||||| ||||    
T  30208614 actgtctgagtaccagctaaagcgatcaccttcccac 30208578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 9338237 - 9338314
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  9338237 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 9338314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 9486871 - 9486948
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  9486871 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 9486948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10871505 - 10871582
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  10871505 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10871582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 16983895 - 16983972
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  16983895 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 16983972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 17001655 - 17001732
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  17001655 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 17001732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22323130 - 22323053
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22323130 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22323053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 24265025 - 24265102
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  24265025 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24265102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24705270 - 24705193
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||| ||| |||||||||||||||||   ||||||||||||||||    
T  24705270 agcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtattattaatataacaagtacctctgat 24705193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 24712689 - 24712766
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  24712689 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 24712766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 44383358 - 44383281
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  44383358 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 44383281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 27220671 - 27220745
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | |||||||||||    
T  27220671 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27220745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 27373924 - 27373982
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  27373924 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 27373982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 11351499 - 11351422
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||| ||||||||||||   | ||||||||||||||    
T  11351499 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgagtattattaatatagcaagtacctctgat 11351422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 21323054 - 21322977
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  21323054 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgat 21322977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 23065062 - 23065145
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||| | ||||||| ||   ||||||||||||||||    
T  23065062 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgtgtattatcaatataacaagtacctctgat 23065145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 23074512 - 23074595
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||| | ||||||| ||   ||||||||||||||||    
T  23074512 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgtgtattatcaatataacaagtacctctgat 23074595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 19817501 - 19817579
Alignment:
Q  21 cagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||| || ||||| ||||||||||||||| || ||| |||||| |||||| |||||| |||||| |||||||||||    
T  19817501 cagcaataaagcaatgtgtagcaccagtatctgtagtagtaattaagggagtactattaatgaaacatgtacctctgat 19817579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 23029249 - 23029191
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||| |||||||||||||    
T  23029249 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaagggagtattattaa 23029191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22742754 - 22742677
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||| | |||||||||| |||||||||||||| ||   |||| |||||||||||    
T  22742754 agcaataaaacaatgcgtagcaccagtaccaataatagcaactaaaggagtattatcaatataacatgtacctctgat 22742677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24874538 - 24874461
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| ||||||| || |||||||||||||||||   | ||||||||||||||    
T  24874538 agcaataaagcaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatatagcaagtacctctgat 24874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 45673800 - 45673723
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| ||||| ||| |||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  45673800 agcaataaaacaatgcgtagctccattatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 45673723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 22733568 - 22733485
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| || ||| | |||||||||||||| |||||||||| |||||| ||||||| ||   ||||||||||||||||    
T  22733568 atcaaaagcaataaatcaacgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgat 22733485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 23204979 - 23205046
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| ||||||| |||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  23204979 caatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 23676583 - 23676650
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| ||||||| |||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  23676583 caatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 23676650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 21142829 - 21142771
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    |||||| || ||||| ||||||||| |||| |||||||||| |||||||||||||||||    
T  21142829 agcaataaagcaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaa 21142771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24657446 - 24657369
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||| | ||||| |||||||||| ||| |||||||||||||   | ||||||||||||||    
T  24657446 agcaataaaacaatgcgtagcagctgtatcaataatagcaactaatggagtattattaatatagcaagtacctctgat 24657369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 24678142 - 24678219
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| ||||||||  |||||||||||||  ||||||||| ||||||||||||||| |   | ||||||||||||||    
T  24678142 agcaataaaacaatgcctagcaccagtatcattaatagcaactaaaggagtattattcatatagcaagtacctctgat 24678219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 24817634 - 24817577
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagta 73  Q
    ||||| |||||| |||||||| |||||||||||||| |||||| ||| ||||||||||    
T  24817634 atcaagagcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagta 24817577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 22739431 - 22739363
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataa 101  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| |||| |  |||||  ||||||||||||    
T  22739431 aatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataa 22739363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 22280771 - 22280840
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||| ||||||||||||| ||||| ||||| ||||||||| |||| |  |||||  |||||||||||||    
T  22280771 aatgactagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataag 22280840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 23105509 - 23105461
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    |||||||| |||||||||||| | |||||||||| |||||| |||||||    
T  23105509 aaacaatgcgtagcaccagtaacaataatagcaactaaaggtgtattat 23105461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 51716 - 51883
Alignment:
Q  34 atgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagtt 133  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||    ||||||| |||     
T  51716 atgagtagcacgagtatctataatagcaattaaaggagtactattaaagaaataagtacctctgataagtcagtcctcattcacaatctgcgtaccagtc 51815  T
Q  134 aaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||  ||||| |||| ||||||    
T  51816 aaagtaaacaccttgccacctgtccgaaccttctttggctgcgtacactgtgaactaatattaccttc 51883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 98831 - 98643
Alignment:
Q  25 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||| |    | |||     
T  98831 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcggtcctcactagtggtttgt 98732  T
Q  125 gtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagtt 213  Q
    |||| ||| | |||||||||||| ||||| |||||||||||||| ||||| || |||| |||||||||||| || || |||||| ||||    
T  98731 gtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagtt 98643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 176035 - 176219
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||  ||| | |||     
T  176035 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactat-aaagaaataagtacctctgataagtcggtctttatta 176133  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    || | |||||||| ||| ||||||||||||||||||||||||  | |||||| | ||| | | |||| ||| || |||||||||||    
T  176134 acagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttctaaagcttcctgcactgcgagctaatatgaccttc 176219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 5465 - 5238
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  5465 tcaatagcaatgaaacaatgagtagcaccagcgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcagtag 5366  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| | ||||||||| || ||||| || ||||||||||| || |  |||||||| ||||||||||| || ||||| ||| |||| ||    
T  5365 tggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttatgtacactatgaactgatatggccctcctcattgcagttata 5266  T
Q  217 gcaaacaatgtccccccgcttacaatca 244  Q
    ||||||||  || | |||||||||||||    
T  5265 gcaaacaacatctctccgcttacaatca 5238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 29982 - 30205
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  29982 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 30081  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| | | || ||||||||||| |||||  | ||||||||||| ||||  | ||||| ||||||||||||||| ||  | ||| |||||||    
T  30082 tagtctgcgtaccaatcaatgcaaacacctttccaccatttctaaccttcttcggctcaggacactgcgaactgatatgaccctctccattgcagttgta 30181  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
     || ||||||||||| ||||||||    
T  30182 acagacaatgtccccacgcttaca 30205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 514609 - 514386
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  514609 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 514510  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||||||||| || || ||||||||||| || |  | |||||  |||||||||||||| ||  | ||| |||||||    
T  514509 tagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaactgatatgaccctctccattgcagttgta 514410  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||||||||| | ||||||    
T  514409 gcagacaatgtccccacacttaca 514386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 441700 - 441757
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagta 73  Q
    ||||| |||||| |||||||  |||||||||||||| |||||||||| ||||||||||    
T  441700 atcaagagcaataaaacaatccgtagcaccagtatcaataatagcaactaaaggagta 441757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 496067 - 496150
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||| |||||| |||||||||| ||||||  || ||| |||  |||| |||||||||||    
T  496067 atcaatagcaataaaacaatgtgtagcactagtatcaataatagcaactaaaggtctactatcaaaataacatgtacctctgat 496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 1526 - 1372
Alignment:
Q  19 aacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcact 118  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||        
T  1526 aacaacaatgaaacaatgtgtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagta 1427  T
Q  119 gattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    | || ||||| ||| ||||||||||||||||||||||||  | ||||||||||||    
T  1426 gttttcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggct 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 28539 - 28385
Alignment:
Q  19 aacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcact 118  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||        
T  28539 aacaacaatgaaacaatgtgtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagta 28440  T
Q  119 gattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    | || ||||| ||| ||||||||||||||||||||||||  | ||||||||||||    
T  28439 gttttcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggct 28385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 251670 - 251890
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||   |||||||||      
T  251670 tcaatagcaatgaaacaatgagtagcactagtatctataatagcaattaaagaagtactattaaagaaacaagtacctctgataagccggtcctcattag 251769  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| |||  | |||||||| |  ||||| |||||| |||||   ||||| |||||||  ||||||||||||||||| |||||| |||| ||    
T  251770 tagtctgcgtaccagtccatgcaaacacttccccaccggtcctagccttc---ggctgagtacactgtgaactgatatgaccttcttcgttgcagtttta 251866  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    |||||||||||| || ||||||||    
T  251867 gcaaacaatgtctccacgcttaca 251890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 230093 - 230026
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  230093 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 230026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 325755 - 325980
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  325755 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtaatattaaagaaacaagtacctctgataagtcgatcctcactag 325854  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      | |||||||| ||| ||||||||||| || ||||| || ||||||||||| || || || ||||  ||||||||||| || || || ||| |||| ||    
T  325855 tggtttgcgtaccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttata 325954  T
Q  217 gcaaacaatgtccccccgcttacaat 242  Q
     |||||||  || |||||||||||||    
T  325955 acaaacaacatctccccgcttacaat 325980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 200725 - 200627
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    ||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  200725 atcaacaacaatgaaacaatgtgtagcactagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 1110 - 883
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcg-tcctcattc 115  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| |     
T  1110 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataa-ttcgatcctcacta 1012  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
       | |||| ||| ||| ||||||||||| || ||||| || ||||||||| | || ||||||||||  |||||||||||||| || || ||| |||| |    
T  1011 gtggtttgcataccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttat 912  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    | |||||||| || || ||||| ||||||    
T  911 aacaaacaatatcaccacgcttgcaatca 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 41783 - 42003
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  41783 tcaatagcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 41882  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| |||||||||||||| || ||  | |||  |||||| ||||  | |||||  |||||||||||||||||| | ||| |||||||    
T  41883 gagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcaggacactgtgaactgatatgaccttccccattgcagttgta 41982  T
Q  217 gcaaacaatgtccccccgctt 237  Q
     || ||||||||||| |||||    
T  41983 acagacaatgtccccacgctt 42003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 1707 - 1520
Alignment:
Q  53 ataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacaccttgccac 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |  ||||||| ||| || |||||||| || || |    
T  1707 ataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcgtaccagtcaatgcaaacactttccctc 1608  T
Q  153 ctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttaca 240  Q
    | ||||| |||||||| ||||| ||||||| |||||||||||||||||| || ||| |||||||||||||||||||||| | ||||||    
T  1607 cggtcctgaccttcttcggctgagtacactgcgaactgatatgaccttcttcattgcagttgtagcaaacaatgtccccacacttaca 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 509 - 732
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  509 tcaatagcaataaaacaatgactagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattgg 608  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  ||||||| ||| || |||||||||||||| || || ||||||||||| || |  | |||||  ||||| |||||||| ||  | ||| |||||||    
T  609 tagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcaggacactgtgaacttatatgaccctctccattgcagttgta 708  T
Q  217 gcaaacaatgtccccccgcttaca 240  Q
    ||| ||||||||||| ||||||||    
T  709 gcagacaatgtccccacgcttaca 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 112 - 14
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  112 atcaacagcaatgaaacaatgagtagcacccgtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 14  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 4346 - 4248
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  4346 atcaacagcaatgaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 5562 - 5715
Alignment:
Q  91 acctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactg 190  Q
    |||||||||||||  |||||||||||| | |||||||| ||| || |||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  5562 acctctgataagtcggtcctcattcaccgtttgcgtaccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactg 5661  T
Q  191 atatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    ||||||||||| || ||  | |||||||||||||  ||||| ||||||||||||    
T  5662 atatgaccttcttcattacaattgtagcaaacaacatccccacgcttacaatca 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 2920 - 2998
Alignment:
Q  18 caacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2920 caacaacaatgaaacaatgagtagccccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctct 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 11968 - 11779
Alignment:
Q  48 tatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacacctt 147  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |    | |||||||| ||| ||||||||||||||    
T  11968 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactggtagtttgcgtaccagtcaaagcaaacacctt 11869  T
Q  148 gccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgctt 237  Q
     ||||| || |||  |||||| || |  | |||||  | ||| |||||||||||  | ||| ||||||| || ||||||||||| |||||    
T  11868 cccaccagttctagtcttcttcggttcaggacactgtgtactaatatgaccttctccattgcagttgtaacagacaatgtccccacgctt 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 95 - 244
Target Start/End: Complemental strand, 62950 - 62801
Alignment:
Q  95 ctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatat 194  Q
    |||||||||  |||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  62950 ctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacactttgccacctgtcctaactttcttaggctgcgtacactgcgaactgatat 62851  T
Q  195 gaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    ||||||  || ||  |||||||| ||||||  ||||| ||||||||||||    
T  62850 gaccttattcattacagttgtagaaaacaacatccccacgcttacaatca 62801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 65549 - 65367
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||   |||||||||    |      
T  65549 agcaaggaaacaatgagtagcaccagtgtctataatagcaattaaaggtgtactattaaagaaacaagtacctctgataagcctgtcctcattggtagtc 65450  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctc 204  Q
    ||||||| ||| || ||| |||| || ||||| |||||||||||||| ||||| || ||||  |||||||| || ||||||||    
T  65449 tgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctgggtgcactgtgaactgatgtggccttcctc 65367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 631 - 717
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  631 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 2099 - 1929
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||| |  | |      
T  2099 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcctgtcctcaatagcagtc 2000  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgat 192  Q
    ||||||| ||| ||||||||||| || ||||| || |||| |||||| ||||| || ||||  ||||||||    
T  1999 tgcgtactagtcaaagcaaacactttcccaccggttctaatcttctttggctgagtgcactgggaactgat 1929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 11875 - 12065
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| ||||||||||||||| |||||||||   |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||  |||||||||     
T  11875 atcaatagcaatgaaacaatgtgtagcaccatggtctataatagcaattaaaggagtactattaaagaaacaagtatctctaataagtcggtcctcatta 11974  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgt 206  Q
    | ||  ||||||| ||| || ||||||||||| |||||||||  | |||||||||||| | | |||| |||||| | ||||||||| ||||    
T  11975 attgtctgcgtaccagtcaatgcaaacacctttccacctgtctgagccttcttaggcttcctgcactgcgaactaagatgaccttcttcgt 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 11857 - 11954
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  11857 tcaatagcaataaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcatt 11954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 1168 - 1253
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1168 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 1253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 242
Target Start/End: Original strand, 5205 - 5326
Alignment:
Q  121 ttgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaa 220  Q
    |||||||| ||| | ||||||||| || ||||| |||||||||||||| || || ||||||| ||||||||||||||||||||| ||| |||| || |||    
T  5205 ttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgagtacactgcgaactgatatgaccttcctcattgcagttataacaa 5304  T
Q  221 acaatgtccccccgcttacaat 242  Q
    |||| ||| |||||||||||||    
T  5305 acaacgtctccccgcttacaat 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 67358 - 67141
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgatt 122  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||    |  |    
T  67358 gcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagtcggtcctcattggtagtct 67259  T
Q  123 gcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaac 222  Q
    || ||| ||| || |||||||| || ||||| || |||||| |||| ||||   |||| | |||||| |||||||||||  | ||| |||||||||| ||    
T  67258 gcataccagtcaatgcaaacacttttccaccagttctaaccctcttcggctcactacattgcgaactaatatgaccttctccattgcagttgtagcagac 67159  T
Q  223 aatgtccccccgcttaca 240  Q
    |||||||||  |||||||    
T  67158 aatgtccccaagcttaca 67141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 164651 - 164450
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgatt 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |    |  |    
T  164651 gcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcactagtagtct 164552  T
Q  123 gcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaac 222  Q
     |||||  || || |||||||| || ||||| || ||||||||||| ||||| ||| | | |||||||||||| ||||| || ||| |||| || |||||    
T  164551 acgtaccggtcaatgcaaacactttcccaccggttctaaccttcttcggctgagtataatgcgaactgatatggccttcttcattgcagttataacaaac 164452  T
Q  223 aa 224  Q
    ||    
T  164451 aa 164450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 30831 - 30770
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  30831 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattat 30770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 47240 - 47155
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataa 101  Q
    ||||| |||||| |||||||| |||||||||| ||| ||||||| || |||||| ||| |||||||  ||||||||||||||||||    
T  47240 atcaatagcaataaaacaatgtgtagcaccagaatcaataatagtaactaaaggtgtactattaaaataacaagtacctctgataa 47155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 7086 - 7242
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  7086 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 7185  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
      | |||||| | ||||| ||||||||| || ||||| ||||||| |||||| ||||    
T  7186 tggtttgcgtgccagttagagcaaacactttaccaccggtcctaatcttcttgggct 7242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 53674 - 53582
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcatt 114  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  53674 agcattgaaacaatgagtagcaccagtttctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagttggtcctcatt 53582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 22170 - 22398
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  |||||||||      
T  22170 tcaatagcaatgaaacaatgagtaacaccagtatctataataccaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattag 22269  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgta 216  Q
      |  || |||| ||| || ||||||||  | ||| | || ||||||||||| ||||| || ||||  ||||||||||| || || || ||| |||| ||    
T  22270 tagtctgagtaccagtcaatgcaaacactataccaacggttctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgcagttata 22369  T
Q  217 gcaaacaatgtccccccgcttacaatcaa 245  Q
    ||||||||  || || ||||| |||||||    
T  22370 gcaaacaacatcaccacgcttgcaatcaa 22398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 796 - 626
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    |      
T  796 agcaatgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagcttgtcctcattagtagtc 697  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgat 192  Q
    ||||||| ||| || |||||||| || ||||| || |||| |||||| ||||| || ||||  ||||||||    
T  696 tgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgagtgcactgtgaactgat 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 10841 - 10916
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||| |||||||| ||||||||| |||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  10841 caataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 15171 - 15257
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  15171 tcaatagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactataaaagaaacaagtacctctgataagt 15257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 6173 - 6240
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||| ||| |||| |||| ||||||||    
T  6173 aaacaatgcgtagcatcagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctct 6240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 10037 - 9957
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10037 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataag 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 441 - 313
Alignment:
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgt 215  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||||| || |||||||| | |||||| |||||||||||||| ||| |||| |    
T  441 actgtttgcgtaccagtcaaagcaaacaccttgccaccggtcctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagttat 342  T
Q  216 agcaaacaatgtccccccgcttacaatca 244  Q
    | |||||||||||||| ||||||||||||    
T  341 aacaaacaatgtccccacgcttacaatca 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 54095 - 54243
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| |      
T  54095 tcaatagcaatgaaacaatgagtaacaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcactag 54194  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaacctt 165  Q
      | |||||||| ||| ||||||||||| || ||||  |||||||||||    
T  54195 tggtttgcgtaccagtgaaagcaaacactttaccactggtcctaacctt 54243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 94145 - 93969
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||    |      
T  94145 agcaatgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcattagtagtc 94046  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgacc 198  Q
    ||||||| ||| |||||||| || || || || ||||| ||||||||||| || || |||| |||||| || |||||    
T  94045 tgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgagtgcactgcgaactaatgtgacc 93969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 115615 - 115791
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||   || |||||    | |    
T  115615 agcaatgaaacaatgtgtagcaccagtatctataatagcaattaaagggatactattaaagaaacaagtacctctgataagtctatcttcatttgtggtt 115714  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgacc 198  Q
    ||| ||| ||  || |||||||| || ||||| |||||||||||||| || || || ||||  ||||||||||||||    
T  115715 tgcataccagccaaggcaaacactttcccaccggtcctaaccttcttcggttgagtgcactgagaactgatatgacc 115791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 213
Target Start/End: Complemental strand, 5100 - 4909
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||   |||||||||    |      
T  5100 agcaatgaaacaatgtgtagcaccagtgtctataatatcaattaaaggagtagtattaaagaaacaagtacctctgataagacggtcctcattagtagtc 5001  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagtt 213  Q
    |||||   ||| ||||||||||| || ||||| || ||||||||| | ||||| |||||||  | ||||||||| || ||||||||| ||||    
T  5000 tgcgtcatagtcaaagcaaacacttttccaccggttctaaccttcctcggctgtgtacactgagtactgatatggccctcctcgttgcagtt 4909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 17735 - 17549
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    ||||||||    |      
T  17735 agcaatgaaacaataagtagcaccaatgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacgatcctcattagtagtc 17636  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttg 208  Q
    ||||||| ||| ||||||||||  || ||||| || ||||||||||| ||||| |||||||  | ||||||||| || || ||||||    
T  17635 tgcgtaccagtcaaagcaaacattttcccaccagttctaaccttcttcggctgtgtacactgagtactgatatggccctcttcgttg 17549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 12605 - 12502
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||| || ||||||||  ||||||||||    
T  12605 atcaacagcaatgaaacaatgagtagcaccagtatctataataacatttaaaggagtactatgaaagaaacaagtagctttgataagtcggtcctcattc 12506  T
Q  116 actg 119  Q
    ||||    
T  12505 actg 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 20785 - 20682
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||| || ||||||||  ||||||||||    
T  20785 atcaacagcaatgaaacaatgagtagcaccagtatctataataacatttaaaggagtactatgaaagaaacaagtagctttgataagtcggtcctcattc 20686  T
Q  116 actg 119  Q
    ||||    
T  20685 actg 20682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 12506 - 12441
Alignment:
Q  179 cactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    |||| ||||||||||||||||||||| ||| |||| || |||||||||||||| ||||||||||||    
T  12506 cactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatca 12441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 20686 - 20621
Alignment:
Q  179 cactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    |||| ||||||||||||||||||||| ||| |||| || |||||||||||||| ||||||||||||    
T  20686 cactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatca 20621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 40111 - 40302
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||||   |||||||||    |      
T  40111 agcaataaaacaatgagtagcacctgtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagacggtcctcattggtagtc 40210  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagtt 213  Q
    ||||||| ||| ||||||||||| || ||||| || ||||||||||| ||||| || ||||  | ||||||||| || || |||||| ||||    
T  40211 tgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcgttgcagtt 40302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 17597 - 17523
Alignment:
Q  25 aatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||||||| |||||||| ||||| |||||||||| |||||| ||||||||||   ||||||||||||||||    
T  17597 aatgaaacaatgcgtagcacctgtatcaataatagcaactaaaggtgtattattaatataacaagtacctctgat 17523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 72; Significance: 7e-33; HSPs: 7)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 151615 - 151766
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattca 116  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||   ||||||| |      
T  151615 tcaatagcaatgaaacaatgagtagcactagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctaataagcctgtcctcactag 151714  T
Q  117 ctgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttctt 168  Q
      | |||||||| ||| | ||||||||| || ||||| ||||||||||||||    
T  151715 tggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctt 151766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 23790 - 23707
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  23790 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 23707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 153699 - 153767
Alignment:
Q  176 gtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    ||||||| |||||| || ||||||||||| ||| |||| |||||||||||||| || ||||||||||||    
T  153699 gtacactgcgaactaatgtgaccttcctcattgcagttatagcaaacaatgtctccacgcttacaatca 153767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 73841 - 73792
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  73841 aaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 73792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 78222 - 78173
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  78222 aaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 78173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 175760 - 175708
Alignment:
Q  26 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    |||||| ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  175760 atgaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 182054 - 182099
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  182054 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 182099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 6508 - 6362
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||   |||||||||    |      
T  6508 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattatagaaacaagtacctctgataagacggtcctcattagtagtc 6409  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttctt 168  Q
    || |||| ||| |||||||| ||||| ||||| || |||||||||||    
T  6408 tgtgtaccagtcaaagcaaatacctttccaccagttctaaccttctt 6362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 9483 - 9397
Alignment:
Q  17 tcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  9483 tcaatagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaatgaaacaagtacctctgataagt 9397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 263279 - 263425
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||   |||||||||    |      
T  263279 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagcctgtcctcattagtagtc 263378  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttctt 168  Q
    ||||||| ||| ||||||||||| || ||||  || |||||||||||    
T  263379 tgcgtaccagtcaaagcaaacacttttccactagttctaaccttctt 263425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 203434 - 203580
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||   |||||||||    |      
T  203434 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagcctgtcctcattagtagtc 203533  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttctt 168  Q
    ||||||| ||| ||||||||||| || ||||  || |||||||||||    
T  203534 tgcgtaccagtcaaagcaaacacttttccactagttctaaccttctt 203580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 424362 - 424438
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||||| |||||||||||||| ||||||| || |||||||||||||||||   | ||||||||||||||    
T  424362 gcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatatagcaagtacctctgat 424438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 85 - 4
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  85 agcaatgaaacaatgaatagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagt 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 244
Target Start/End: Original strand, 16761 - 16912
Alignment:
Q  93 ctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgat 192  Q
    |||||||||||  |||||||||||| | |||| ||| ||  || | ||| |||||||||||||||||||||||||||| ||||||||||| |||||| ||    
T  16761 ctctgataagtcggtcctcattcacagtttgcataccagacaacgaaaataccttgccacctgtcctaaccttcttagtctgcgtacactgcgaactaat 16860  T
Q  193 atgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttacaatca 244  Q
    ||| |||||||| ||  |||||||||||||||| ||||| ||||| ||||||    
T  16861 atgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatca 16912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 240
Target Start/End: Complemental strand, 1020 - 836
Alignment:
Q  56 atagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacaccttgccacctg 155  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    || ||||||| ||| || |||||||||||||| |  |    
T  1020 atagcaattaaaggagtactattaaagaaacaagtacctctgataagttggtcctcattggtagactgcgtaccagtcaatgcaaacaccttgcccctag 921  T
Q  156 tcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgcttaca 240  Q
    | ||||||||||| || |  | ||||| |||||| |||||||| ||  | ||  |||| ||||| ||||||||||| ||||||||    
T  920 ttctaaccttcttcggttcaggacactgcgaactaatatgaccctctccatttcagttatagcagacaatgtccccacgcttaca 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 8713 - 8491
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||   |||||| |    |      
T  8713 agcaatgaaacattgagtagcactagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcactagtagtc 8614  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| || |||||||| || ||||| || ||||||||||| || ||  | |||| |||||||||||| || |  || ||| |||| || ||||    
T  8613 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaa 8514  T
Q  222 caatgtccccccgcttacaatca 244  Q
    ||| ||| || ||||| ||||||    
T  8513 caacgtcaccacgcttgcaatca 8491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 18927 - 18705
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgat 121  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||   |||||| |    |      
T  18927 agcaatgaaacattgagtagcactagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcactagtagtc 18828  T
Q  122 tgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaa 221  Q
    ||||||| ||| || |||||||| || ||||| || ||||||||||| || ||  | |||| |||||||||||| || |  || ||| |||| || ||||    
T  18827 tgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaa 18728  T
Q  222 caatgtccccccgcttacaatca 244  Q
    ||| ||| || ||||| ||||||    
T  18727 caacgtcaccacgcttgcaatca 18705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 1832 - 1643
Alignment:
Q  48 tatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaacacctt 147  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    |  ||||||| ||| || |||||||| ||    
T  1832 tatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacacttt 1733  T
Q  148 gccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaaacaatgtccccccgctt 237  Q
    ||| || || ||||||||||| || |  | |||||  |||||||||||||| ||  | ||| |||||||||| | ||||||||| |||||    
T  1732 gcccccagttctaaccttcttcggttcgggacactgtgaactgatatgaccctctccattgcagttgtagcagataatgtccccacgctt 1643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 4146 - 3992
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||||||||||||||| | ||||||||||| || |||||||||||||   ||||| |||||||||||||||||||||| ||||||  |||||||||     
T  4146 atcaacagcaatgaaacaaagtgtagcaccagtgtcaataatagcaatta---gagtactattaaagaaacaagtacctcttataagtcggtcctcatta 4050  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggct 173  Q
    || |  || ||||  || || ||||||||||| |||||||||  | ||||||||||||    
T  4049 accgtctgtgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggct 3992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 8036 - 7972
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    ||||| |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  8036 atcaaaagcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaa 7972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 110657 - 110727
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaac 86  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  110657 atcaacaacaatgaaacaatgagtagcaccagtatctataacagcaattaaaggagtactattaaagaaac 110727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 16840 - 16738
Alignment:
Q  42 caccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattgcgtacgagttaaagcaaa 141  Q
    |||||||||| |||||||||||||||||||||  |||||||||||| ||||||||||| |    |||||||||||||| |||||||| ||| ||||||||    
T  16840 caccagtatcaataatagcaattaaaggagtacaattaaagaaacatgtacctctgatcaaccggtcctcattcactgtttgcgtaccagtcaaagcaaa 16741  T
Q  142 cac 144  Q
    |||    
T  16740 cac 16738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 15457 - 15582
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| |||||| |||||||| ||||||||| |||| ||||||||||||||||||||| ||| |||| |||| ||||||||||| | |   |||||||||    
T  15457 atcaatagcaataaaacaatgcgtagcaccaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctgatcaatcgatcctcattc 15556  T
Q  116 actgattgcgtacgagttaaagcaaa 141  Q
     ||| |||||||| ||| ||||||||    
T  15557 tctgtttgcgtaccagtcaaagcaaa 15582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 36551 - 36628
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  36551 agcaatgaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 36628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 17925 - 18005
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| |||| |||| ||||||||    
T  17925 atcaacagcaataaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctct 18005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 111164 - 111081
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| |||||||  |||| |||||||||||    
T  111164 atcaatagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactattaaaataacatgtacctctgat 111081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 2054 - 2129
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||    
T  2054 caataaaacaatgcgtagcaccagtatctataatagtaattaaaggagtactattaatgaaacatgtacctctgat 2129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 216669 - 216552
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattcactgattg 123  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| |||| |||| ||||||||||| | ||  ||||||||| |||  ||    
T  216669 caataaaacaatgtgtagcaccagtatcaataatagcaattaaagtagtactatcaaagtaacatgtacctctgatcaattgatcctcattctctgtctg 216570  T
Q  124 cgtacgagttaaagcaaa 141  Q
    ||||| ||| ||||||||    
T  216569 cgtaccagtcaaagcaaa 216552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 17991 - 18065
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctg 97  Q
    ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||   | ||||||||||||    
T  17991 gcaataaagcaatgagtagcaccagtatcaataatagcaattaaaggagtattattaatatagcaagtacctctg 18065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 11523 - 11599
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  11523 gcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 11599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 55058 - 55134
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  55058 gcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 55134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 10409 - 10332
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| || ||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  10409 agcaataaaacaatgcgtggcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 10332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 5135 - 5320
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||| |||||||| |||||||||||||| ||||||||||||||| ||||| ||| |||| |||| |||||||| || |    ||||| ||||    
T  5135 atcaacaccaataaaacaatgcgtagcaccagtatcaataatagcaattaaaagagtactatcaaagtaacatgtacctctaatcaaccggtccttattc 5234  T
Q  116 actgattgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttc 201  Q
    | ||  ||||||| ||| ||||||||||| || ||||  ||   | |||||||||||| | | |||| |||||  |||||||||||    
T  5235 aatgtctgcgtaccagtcaaagcaaacactttcccactagtttgagccttcttaggcttcttgcactgcgaaccaatatgaccttc 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 15830 - 15753
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| ||||| |||| |||||||||||||||||   ||||||||||||||||    
T  15830 agcaattaaacaatgcgtagcaccagtatcaataattgcaactaaaggagtattattaatataacaagtacctctgat 15753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8463 - 8540
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  8463 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8311 - 8388
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  8311 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 8388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 22300 - 22377
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  22300 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 22377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 7289 - 7366
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  7289 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 7366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3477 - 3554
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  3477 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 17213 - 17290
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| ||||||| || ||||||||| |||||||   ||||||||||||||||    
T  17213 agcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagttttattaatataacaagtacctctgat 17290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 17317 - 17240
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  17317 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 24353 - 24433
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    ||||||| |||| |||||||| ||||| | |||||||||||||| |||||| |||||| |||||| |||||| ||||||||    
T  24353 atcaacaacaataaaacaatgtgtagccctagtatctataatagtaattaagggagtactattaatgaaacatgtacctct 24433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 195089 - 195034
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  195089 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattat 195034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 11075 - 11203
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| |||||| ||||||||||||| ||||||||| |||||| |||||||| ||||| ||| |||| |||| |||||||| || |     |||||||||    
T  11075 atcaatagcaataaaacaatgagtagtaccagtatcaataataacaattaaatgagtactatcaaagtaacatgtacctctaatcaaacgatcctcattc 11174  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
     ||| |||||||| ||| |||||||||||    
T  11175 tctgtttgcgtaccagtcaaagcaaacac 11203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 48719 - 48795
Alignment:
Q  23 gcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  48719 gcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 48795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 64 - 147
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  64 atcaatagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 4481 - 4564
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  4481 atcaatagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 201 - 268
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||   |||||||||||||    
T  201 aaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctct 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 2783 - 2906
Alignment:
Q  121 ttgcgtacgagttaaagcaaacaccttgccacctgtcctaaccttcttaggctgcgtacactacgaactgatatgaccttcctcgttgaagttgtagcaa 220  Q
    |||||||| ||| | ||||||||| || ||||| || ||||||||||| || || | |||||  ||||||||||| || ||||| ||| |||| ||||||    
T  2783 ttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaa 2882  T
Q  221 acaatgtccccccgcttacaatca 244  Q
    || ||||| |||||||||||||||    
T  2883 actatgtctccccgcttacaatca 2906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 11311 - 11394
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  11311 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 11394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 25242 - 25287
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  25242 aatgagtagcaccagtatcaataattgcaattaaaggagtactatt 25287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 2924 - 2994
Alignment:
Q  29 aaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||| |||||||||||||| |||||||||| ||| |||||||||||||   ||||||||||||||||    
T  2924 aaacaatgcgtagcaccagtatcaataatagcaactaatggagtattattaatataacaagtacctctgat 2994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 1020 - 943
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  1020 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 629 - 552
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||| ||||||| ||   ||||||||||||||||    
T  629 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgat 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10421 - 10498
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  10421 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 29179 - 29102
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||||||||| |||| |||||||||| |||||||||||||||||   ||||||||||||||||    
T  29179 agcaataaatcaatgcgtagcaccattatcaataatagcaactaaaggagtattattaatataacaagtacctctgat 29102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 13375 - 13298
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||   | ||||||||||||||    
T  13375 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 13298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 41208 - 41285
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| || ||||| ||||| ||||| || |||||||||| |||||||||||||||||   | ||||||||||||||    
T  41208 agcaataaagcaatgcgtagccccagtgtcaataatagcaactaaaggagtattattaatatagcaagtacctctgat 41285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 13736 - 13608
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| ||||||  ||||||| |||||| || |||| ||||||||||||||||||||| ||| |||| |||| ||||||||||| |     |||||||||    
T  13736 atcaatagcaatagaacaatgtgtagcatcaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctgatcaaacgatcctcattc 13637  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
     ||| ||| |||| ||| |||||||||||    
T  13636 tctgtttgtgtaccagtcaaagcaaacac 13608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 49134 - 49086
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaatt 64  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  49134 atcaacatcaatgaaacaatgagtagcactagtatctataatagcaatt 49086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 14523 - 14440
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| || ||| |||||||| |||||||||||||| |||| ||| |||||||||||| ||| |||| |||| |||||||||||    
T  14523 atcaatagaaataaaacaatgtgtagcaccagtatcaataaaagctattaaaggagtaatatcaaagtaacatgtacctctgat 14440  T

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Target: scaffold0278 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 3598 - 3681
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| || ||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  3598 atcaatagcaataaaacaatgcgtagcaccagtatcaatgatagcaactaaaggtgtactatcaaaataacaagtacctctgat 3681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 93 - 148
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  93 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattat 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 7996 - 7913
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| || ||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  7996 atcaatagcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 7913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 55727 - 55644
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| ||| |||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||||||||||    
T  55727 atcaatagcaataaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgat 55644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 41679 - 41762
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  41679 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 41762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 75399 - 75482
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  75399 atcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 75482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 34964 - 34911
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattat 77  Q
    |||| ||||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  34964 caataaaacaatgcttagcaccagtatcaataatagcaactaaaggagtattat 34911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 1364 - 1414
Alignment:
Q  53 ataatagcaattaaaggagtattattaaagaaacaagtacctctgataagt 103  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  1364 ataatagctattaaaggagtactattcaagaaacaagtacctctgataagt 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 11607 - 11533
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctct 96  Q
    |||||| || ||||| |||||||||||||| ||||||| || |||||||||||||||||   |||||||||||||    
T  11607 agcaataaagcaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatataacaagtacctct 11533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 1267 - 1206
Alignment:
Q  38 gtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||||||||||| |||||||||| |||||||||||||||||   ||||||| ||||||||    
T  1267 gtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagttcctctgat 1206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 2514 - 2437
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| ||| |||| |||||||||||||| |||||||||| |||||| ||||||||||   | ||||||||||||||    
T  2514 agcaataaaagaatgcgtagcaccagtatcaataatagcaactaaaggtgtattattaatatagcaagtacctctgat 2437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 14964 - 15041
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||| ||||||| ||   | ||||||||||||||    
T  14964 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 15041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 15236 - 15111
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||| |||||| |||||||| |||||||||||||  |||||||||| |||||||||| ||| |||  |||| |||||||| || | |   |||||||||    
T  15236 atcaagagcaataaaacaatgcgtagcaccagtattaataatagcaactaaaggagtactatcaaaataacatgtacctctaatcaatcgatcctcattc 15137  T
Q  116 actgattgcgtacgagttaaagcaaa 141  Q
     |||  ||||||| ||| ||||||||    
T  15136 tctgtctgcgtaccagtcaaagcaaa 15111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 37071 - 36994
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| |||||||||||||| |||||||||| ||||||||||| || ||   |||| |||||||||||    
T  37071 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtatgatcaatataacatgtacctctgat 36994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 26399 - 26527
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataagttcgtcctcattc 115  Q
    ||||||| |||| ||||| || ||||||||| |||| |||||||||| |||| ||||| ||| |||  ||||  ||||||| || | |   |||||||||    
T  26399 atcaacaacaataaaacattgcgtagcaccaatatcaataatagcaactaaaagagtactatcaaaataacatttacctctaatcaatcgatcctcattc 26498  T
Q  116 actgattgcgtacgagttaaagcaaacac 144  Q
     |||  ||||||| ||| |||||||||||    
T  26499 tctgtctgcgtaccagtaaaagcaaacac 26527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 1029 - 1093
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||||||    
T  1029 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactattaa 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 31936 - 32012
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctga 98  Q
    |||||| ||| |||| ||| |||||||||| |||||||||| |||||||||||||||||   | |||||||||||||    
T  31936 agcaataaaataatgcgtaacaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctga 32012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 37402 - 37478
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctga 98  Q
    |||||| ||| |||| ||| |||||||||| |||||||||| |||||||||||||||||   | |||||||||||||    
T  37402 agcaataaaataatgcgtaacaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctga 37478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 10479 - 10412
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||||||||||| |||||||||| ||||||||| |||||||   | ||||||||||||||    
T  10479 caatgcgtagcaccagtatcaataatagcaactaaaggagtgttattaatatagcaagtacctctgat 10412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 13134 - 13067
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||||||||||| |||||||||| ||||||||| |||||||   | ||||||||||||||    
T  13134 caatgcgtagcaccagtatcaataatagcaactaaaggagttttattaatatagcaagtacctctgat 13067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 2036 - 2119
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| ||| |||| |||||||||||||| |||||||||| |||||| ||| ||| |||  ||||||||| ||||||    
T  2036 atcaaaagcaataaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacttctgat 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 40764 - 40681
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| |||||||||||||| ||||| |||| |||||| ||| ||| |||  | ||||||||||||||    
T  40764 atcaaaagcaataaaacaatgcgtagcaccagtatcaataatggcaactaaaggtgtactatcaaaatagcaagtacctctgat 40681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 8270 - 8353
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||| |||||| |||||||||| |||||| ||| ||| | |  ||||||||||||||||    
T  8270 atcaaaagcaataaaacaatgtgtagcactagtatcaataatagcaactaaaggcgtactatcacaataacaagtacctctgat 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 57863 - 57788
Alignment:
Q  24 caatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||| |||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||  |||| |||||||||||    
T  57863 caataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgat 57788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 23555 - 23472
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| |||||| |||||||| ||||||| | |||| |||||||||| |||||||||| ||| |||  |||| |||||||||||    
T  23555 atcaagagcaataaaacaatgcgtagcactattatcaataatagcaactaaaggagtactatcaaaataacacgtacctctgat 23472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9608 - 9551
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagta 73  Q
    ||||| |||||| |||||||| |||||||||||||| |||||| ||| ||||||||||    
T  9608 atcaagagcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagta 9551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 21904 - 21946
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaatt 64  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  21904 agcaatgaaacaatgagtagctccagtgtctataatagcaatt 21946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 2635 - 2680
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  2635 aatgagtagcaccagtatcaataattgcaatcaaaggagtattatt 2680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 13571 - 13502
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgataag 102  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| |||| |  |||||  |||||||||||||    
T  13571 aatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataag 13502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 861 - 816
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  861 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18703 - 18780
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| |||||||| ||||||| |||||| |||||| ||| |||||| ||| ||| |||  ||||||||||||||||    
T  18703 agcaataaaacaatgcgtagcactagtatcaataatatcaactaaaggtgtactatcaaaataacaagtacctctgat 18780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 6920 - 6977
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagta 73  Q
    ||||| |||||| |||||||| |||||||||||||| |||||| || |||||||||||    
T  6920 atcaatagcaataaaacaatgcgtagcaccagtatcaataataacagttaaaggagta 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14050 - 14107
Alignment:
Q  16 atcaacagcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagta 73  Q
    ||||| |||||| |||||||| |||||||||||||| |||||| || |||||||||||    
T  14050 atcaatagcaataaaacaatgcgtagcaccagtatcaataataacagttaaaggagta 14107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 1192 - 1147
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  1192 aatgagtagcaccagtatctataattgcaatcaaaggagtactatt 1147  T

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Target: scaffold0218; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 24963 - 24910
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtatt 75  Q
    |||||| |||||||| |||||||||||||| |||||||||| |||||| |||||    
T  24963 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggcgtatt 24910  T

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Target: scaffold0124 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 5045 - 5000
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  5045 aatgagtagcaccagtatcgataattgcaatcaaaggagtattatt 5000  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 171188 - 171229
Alignment:
Q  39 tagcaccagtatctataatagcaattaaaggagtattattaa 80  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  171188 tagcaccagtatcaataatagcaactaaaggagtattattaa 171229  T

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Target: scaffold0789 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 1 - 68
Alignment:
Q  32 caatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    ||||| ||||||||| |||| || |||||| ||||||||||||||||||   | ||||||||||||||    
T  1 caatgcgtagcaccactatcaattatagcacttaaaggagtattattaatatagcaagtacctctgat 68  T

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Target: scaffold0358 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 9011 - 9077
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||| |||||||||||||| |||||||||| |||||| ||||||| ||   | ||||||||||||||    
T  9011 aatgtgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgat 9077  T

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Target: scaffold1881 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 731 - 674
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattatta 79  Q
    |||||| || ||||| |||||||||||||| |||||||||| | || |||||||||||    
T  731 agcaataaagcaatgcgtagcaccagtatcaataatagcaacttaatgagtattatta 674  T

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Target: scaffold0673 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 5544 - 5499
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  5544 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 5499  T

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Target: scaffold0225 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 26460 - 26505
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  26460 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 26505  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 35149 - 35194
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  35149 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 35194  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 24027 - 24072
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  24027 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 24072  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 21657 - 21734
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| ||| |||| ||||||||  |||| |||||||||| ||| |||||||||||||   |||| |||||||||||    
T  21657 agcaataaaataatgcgtagcaccgatatcaataatagcaactaagggagtattattaatataacatgtacctctgat 21734  T

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Target: scaffold0081; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 37081 - 37158
Alignment:
Q  22 agcaatgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 99  Q
    |||||| ||| |||| ||||||||  |||| |||||||||| ||| |||||||||||||   |||| |||||||||||    
T  37081 agcaataaaataatgcgtagcaccgatatcaataatagcaactaagggagtattattaatataacatgtacctctgat 37158  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 8221 - 8266
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  8221 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 8266  T

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Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 90566 - 90611
Alignment:
Q  33 aatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  90566 aatgagtagcaccagtatcaataattgcaatcaaaggagtactatt 90611  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 3556 - 3608
Alignment:
Q  26 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattatt 78  Q
    |||||| |||||||||||||| |||| ||||| ||||| ||||||||| ||||    
T  3556 atgaaagaatgagtagcaccaatatcaataattgcaatcaaaggagtactatt 3608  T

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