View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_high_40 (Length: 369)

Name: NF6698_high_40
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_high_40
NF6698_high_40
[»] chr5 (22 HSPs)
chr5 (19-369)||(21067137-21067492)
chr5 (319-362)||(9068808-9068851)
chr5 (319-365)||(12638545-12638591)
chr5 (318-362)||(671139-671183)
chr5 (318-362)||(4617846-4617890)
chr5 (318-362)||(16496604-16496648)
chr5 (318-362)||(19836167-19836211)
chr5 (318-362)||(24443947-24443991)
chr5 (318-362)||(39151006-39151050)
chr5 (319-362)||(10011475-10011518)
chr5 (319-362)||(12769205-12769248)
chr5 (318-357)||(39527936-39527975)
chr5 (319-364)||(29069633-29069678)
chr5 (318-362)||(1287319-1287363)
chr5 (318-362)||(6041924-6041968)
chr5 (318-362)||(6219270-6219314)
chr5 (318-362)||(9054051-9054095)
chr5 (318-362)||(10070767-10070811)
chr5 (318-362)||(12707956-12708000)
chr5 (318-362)||(32466573-32466617)
chr5 (318-362)||(37940922-37940966)
chr5 (318-362)||(42448215-42448259)
[»] chr8 (21 HSPs)
chr8 (312-357)||(31665197-31665242)
chr8 (313-365)||(12702375-12702427)
chr8 (322-362)||(35222281-35222321)
chr8 (318-362)||(41562446-41562490)
chr8 (319-362)||(4694767-4694810)
chr8 (318-357)||(35421703-35421742)
chr8 (318-362)||(3728406-3728450)
chr8 (318-362)||(4312137-4312181)
chr8 (318-362)||(7772130-7772174)
chr8 (318-362)||(8547210-8547254)
chr8 (318-362)||(9998723-9998767)
chr8 (318-362)||(10096616-10096660)
chr8 (318-362)||(14188094-14188138)
chr8 (318-362)||(25199050-25199094)
chr8 (318-362)||(26675561-26675605)
chr8 (318-362)||(26737975-26738019)
chr8 (318-362)||(27544996-27545040)
chr8 (318-357)||(29845169-29845209)
chr8 (318-362)||(34540144-34540188)
chr8 (318-362)||(34711635-34711679)
chr8 (318-362)||(36586486-36586530)
[»] chr7 (19 HSPs)
chr7 (319-363)||(5841558-5841602)
chr7 (318-365)||(6384595-6384642)
chr7 (318-359)||(37919973-37920014)
chr7 (318-362)||(4227338-4227382)
chr7 (318-362)||(10422482-10422526)
chr7 (318-362)||(24382595-24382639)
chr7 (322-362)||(28649446-28649486)
chr7 (318-362)||(40857420-40857464)
chr7 (322-364)||(21421983-21422026)
chr7 (318-362)||(1573921-1573965)
chr7 (318-362)||(3861416-3861460)
chr7 (318-362)||(4106558-4106602)
chr7 (318-362)||(9379995-9380039)
chr7 (318-362)||(18944928-18944972)
chr7 (318-362)||(31717301-31717345)
chr7 (318-362)||(32251415-32251459)
chr7 (318-362)||(32986107-32986151)
chr7 (318-362)||(38397486-38397530)
chr7 (318-362)||(41862791-41862835)
[»] chr2 (21 HSPs)
chr2 (318-362)||(18779915-18779959)
chr2 (319-362)||(6598405-6598448)
chr2 (318-365)||(25510379-25510426)
chr2 (318-362)||(16535023-16535067)
chr2 (318-362)||(23497592-23497636)
chr2 (318-362)||(35706856-35706900)
chr2 (318-362)||(42007295-42007339)
chr2 (318-362)||(43461414-43461458)
chr2 (319-362)||(12541416-12541459)
chr2 (318-357)||(42211282-42211321)
chr2 (319-364)||(7907008-7907053)
chr2 (318-362)||(11816856-11816900)
chr2 (318-362)||(12236125-12236169)
chr2 (318-362)||(13268055-13268099)
chr2 (318-362)||(18368798-18368842)
chr2 (318-362)||(35476570-35476614)
chr2 (318-362)||(39070023-39070067)
chr2 (318-362)||(39310370-39310414)
chr2 (318-362)||(40592317-40592361)
chr2 (318-362)||(42030248-42030291)
chr2 (318-362)||(42133522-42133566)
[»] chr1 (21 HSPs)
chr1 (322-362)||(13048887-13048927)
chr1 (322-362)||(13053884-13053924)
chr1 (313-364)||(16689085-16689136)
chr1 (318-363)||(8214627-8214672)
chr1 (318-362)||(19279932-19279976)
chr1 (318-362)||(40685533-40685577)
chr1 (318-362)||(43025890-43025934)
chr1 (319-362)||(43500223-43500266)
chr1 (319-357)||(38886474-38886512)
chr1 (318-359)||(13948108-13948149)
chr1 (319-356)||(39787736-39787773)
chr1 (319-364)||(41651078-41651123)
chr1 (318-362)||(5598305-5598349)
chr1 (318-362)||(11403173-11403217)
chr1 (318-362)||(17068156-17068200)
chr1 (318-362)||(22561247-22561291)
chr1 (318-362)||(25821030-25821074)
chr1 (318-362)||(30455208-30455252)
chr1 (322-362)||(45007771-45007811)
chr1 (318-362)||(49948245-49948289)
chr1 (318-362)||(50248033-50248077)
[»] chr6 (10 HSPs)
chr6 (318-365)||(2711308-2711355)
chr6 (318-365)||(4128949-4128996)
chr6 (318-362)||(7098810-7098854)
chr6 (313-369)||(31642759-31642815)
chr6 (308-362)||(2958987-2959041)
chr6 (318-362)||(2395637-2395681)
chr6 (318-362)||(4083591-4083635)
chr6 (318-362)||(8939630-8939674)
chr6 (318-362)||(10181049-10181093)
chr6 (318-362)||(21513076-21513120)
[»] chr3 (20 HSPs)
chr3 (318-365)||(37312532-37312579)
chr3 (318-362)||(23525986-23526030)
chr3 (318-362)||(32590976-32591020)
chr3 (318-362)||(46311523-46311567)
chr3 (318-362)||(47410832-47410876)
chr3 (318-362)||(50238920-50238964)
chr3 (318-357)||(36540109-36540148)
chr3 (318-365)||(40639606-40639653)
chr3 (318-357)||(44879318-44879357)
chr3 (318-362)||(12948814-12948858)
chr3 (318-362)||(15003632-15003676)
chr3 (318-362)||(34397684-34397728)
chr3 (318-362)||(38127922-38127966)
chr3 (318-362)||(40193036-40193080)
chr3 (318-362)||(40559678-40559722)
chr3 (318-362)||(41464668-41464712)
chr3 (318-362)||(44037524-44037568)
chr3 (318-362)||(45475312-45475356)
chr3 (318-362)||(46894817-46894861)
chr3 (318-362)||(53583965-53584009)
[»] scaffold0122 (1 HSPs)
scaffold0122 (318-362)||(15676-15720)
[»] chr4 (11 HSPs)
chr4 (322-362)||(29334503-29334543)
chr4 (319-362)||(24407502-24407545)
chr4 (319-362)||(31435998-31436041)
chr4 (318-359)||(1083512-1083553)
chr4 (319-360)||(17815224-17815265)
chr4 (318-362)||(3084322-3084366)
chr4 (318-362)||(24712092-24712136)
chr4 (318-362)||(28187244-28187288)
chr4 (318-362)||(29428059-29428103)
chr4 (325-357)||(41049052-41049084)
chr4 (318-362)||(42116485-42116529)
[»] scaffold0633 (1 HSPs)
scaffold0633 (319-364)||(3873-3918)
[»] scaffold0778 (1 HSPs)
scaffold0778 (318-362)||(822-866)
[»] scaffold0008 (1 HSPs)
scaffold0008 (318-362)||(39393-39437)


Alignment Details
Target: chr5 (Bit Score: 308; Significance: 1e-173; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 19 - 369
Target Start/End: Original strand, 21067137 - 21067492
Alignment:
Q  19 atacataacaagcaattgccggttggtccataaacatataggagaagatatatagaccactttgatcatatctctccaataaataacactaccttaggaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21067137 atacacaacaagcaattgccggttggtccataaacatataggagaagatatatagaccactttgatcatatctctccaataaataacactaccttaggaa 21067236  T
Q  119 gtctttttaaggctaaagttttgctaaatgtgtaacattaggatataggaaaatgggtttttagtatg-----agtctttcttttatttaaaaagtgtat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||    
T  21067237 gtctttttaaggctaaagttttgctaaatgtgtaacattaggatataggaaaatgggtttttagtatgatgatagtctttcttttatttaaaaagtgtat 21067336  T
Q  214 gatatgacttagaggacttgtatcaacaacttaattaaaccgtttatttgaaatcatttcatattgtgtatatatatttgggtaatgttaaccagtgtcg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  21067337 gatatgacttagaggacttgtatcaacaacttaattaaaccgtttatttgaaatcatttcatattgtgtatatatatttgggtaatgtaaaccagtgccg 21067436  T
Q  314 tctggaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgctttg 369  Q
    |   |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21067437 ttcagaagtcctagctcaactggtaaaatatcgaaattgttaggtcggacgctttg 21067492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 9068808 - 9068851
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  9068808 aagtcctagctcaactggtaaaatgtcgaaattgttaggtcgga 9068851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 12638591 - 12638545
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||||    
T  12638591 aagtcctagctcaactagtaaaatatcgaaattgttaggccggacgc 12638545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 671183 - 671139
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||    
T  671183 gaagtcctagttcaactggcaaaatgccgaaattgttaggtcgga 671139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 4617890 - 4617846
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  4617890 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 4617846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 16496604 - 16496648
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  16496604 gaagtcctagttcaactggcaaaatgtcgaaattgttaggccgga 16496648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 19836211 - 19836167
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||    
T  19836211 gaagtcctagctcaactggcaaaatgtcgaaattgttaggtcgga 19836167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 24443991 - 24443947
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||    
T  24443991 gaagtcctagctcaactggcaaaataccgaaattgttaggtcgga 24443947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 39151050 - 39151006
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  39151050 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 39151006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 10011475 - 10011518
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||    
T  10011475 aagtcctagctcaaccggtaaaatgtcgaaattgttaggtcgga 10011518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 12769248 - 12769205
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||    
T  12769248 aagtcctagctcaactggtaaaatgccgaaattgttaggtcgga 12769205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 39527936 - 39527975
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  39527936 gaagtcctagttcaactggtaaaatgccgaaattgttagg 39527975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 29069633 - 29069678
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcggacg 364  Q
    ||||||||| |||||||| |||||| |||||||||||||| |||||    
T  29069633 aagtcctagctcaactggcaaaataccgaaattgttaggttggacg 29069678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 1287319 - 1287363
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||| |||||||||  ||||||||||||||||||    
T  1287319 gaagtcctagctcaattggtaaaatgccgaaattgttaggtcgga 1287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 6041968 - 6041924
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||| ||||| ||||    
T  6041968 gaagtcctagctcaactggtaaaatgtcgaaattattaggccgga 6041924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 6219314 - 6219270
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||| |||||||||||   ||||||||||||||||||    
T  6219314 gaagtcctagtttaactggtaaaacgccgaaattgttaggtcgga 6219270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 9054095 - 9054051
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||| ||||||||||||| ||||    
T  9054095 gaagtcctagctcaactggcaaaataccgaaattgttaggccgga 9054051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 10070811 - 10070767
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||   |||||||||||||||||    
T  10070811 gaagtcctagctcaactggtaaaatgctgaaattgttaggtcgga 10070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 12708000 - 12707956
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  12708000 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 12707956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 32466573 - 32466617
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  32466573 gaagtcctagttcaactgataaaatgtcgaaattattaggccgga 32466617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 37940922 - 37940966
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  37940922 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 37940966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 42448215 - 42448259
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  42448215 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 42448259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 31665242 - 31665197
Alignment:
Q  312 cgtctggaagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||    
T  31665242 cgtctagaagtcctagttcaactgataaaatatcgaaattgttagg 31665197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 12702427 - 12702375
Alignment:
Q  313 gtctggaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    |||| |||||||||| ||||||||| ||||| ||||||||||||| |||||||    
T  12702427 gtctagaagtcctagctcaactggttaaataccgaaattgttaggccggacgc 12702375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 35222281 - 35222321
Alignment:
Q  322 tcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  35222281 tcctagctcaactggtaaaatgtcgaaattgttaggtcgga 35222321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 41562446 - 41562490
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  41562446 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 41562490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 4694810 - 4694767
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  4694810 aagtcctagctcaactggcaaaatgtcgaaattgttaggtcgga 4694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 35421742 - 35421703
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  35421742 gaagtcctagttcaactggcaaaatgtcgaaattgttagg 35421703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 3728450 - 3728406
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||| || |||||||  |||||||||||||||||||||||||    
T  3728450 gaagtcccagctcaactgacaaaatatcgaaattgttaggtcgga 3728406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 4312137 - 4312181
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  4312137 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 4312181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 7772174 - 7772130
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  7772174 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 7772130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 8547254 - 8547210
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  8547254 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 8547210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 9998767 - 9998723
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||||    
T  9998767 gaagtcctagttcaactggcaaaatgccgaaattgttaggccgga 9998723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 10096616 - 10096660
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  10096616 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 10096660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 14188094 - 14188138
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  14188094 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 14188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 25199050 - 25199094
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  25199050 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 25199094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 26675561 - 26675605
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  26675561 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 26675605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 26737975 - 26738019
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  26737975 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 26738019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 27545040 - 27544996
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||    
T  27545040 gaagttctagctcaactggcaaaatgtcgaaattgttaggtcgga 27544996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 29845209 - 29845169
Alignment:
Q  318 gaagtcctagttcaactggtaaaa-tatcgaaattgttagg 357  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  29845209 gaagtcctagttcaactggcaaaaatatcgaaattgttagg 29845169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 34540188 - 34540144
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||||    
T  34540188 gaagtcctagttcaactggcaaaatgccgaaattgttaggccgga 34540144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 34711679 - 34711635
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  34711679 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 34711635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 36586486 - 36586530
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  36586486 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 36586530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 5841602 - 5841558
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcggac 363  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  5841602 aagtcctagctcaattggtaaaatatcgaaattgttaggtcggac 5841558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 6384642 - 6384595
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  6384642 gaagtcctagctcaactggtaaaataccgaaattgttaggccggacgc 6384595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 37919973 - 37920014
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtc 359  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  37919973 gaagtcctagctcaactggcaaaatatcgaaattgttaggtc 37920014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 4227338 - 4227382
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||    
T  4227338 gaagtcctagatcaaccggtaaaataccgaaattgttaggtcgga 4227382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 10422482 - 10422526
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||    
T  10422482 gaagtcttagctcaactggcaaaatatcgaaattgttaggtcgga 10422526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 24382595 - 24382639
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  24382595 gaagttctagctcaactggtaaaataccgaaattgttaggtcgga 24382639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 28649486 - 28649446
Alignment:
Q  322 tcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  28649486 tcctagctcaactggtaaaatagcgaaattgttaggtcgga 28649446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 40857464 - 40857420
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||    
T  40857464 gaagtcctagctcaaatggtaaaatgtcgaaattgttaggtcgga 40857420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 21421983 - 21422026
Alignment:
Q  322 tcctagttcaactggtaaaa-tatcgaaattgttaggtcggacg 364  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  21421983 tcctagttcaactggtaaaaatatcgaaattgttagatcggacg 21422026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 1573965 - 1573921
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  1573965 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 1573921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 3861460 - 3861416
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||| |||||| ||||| |||||||||||||| ||||    
T  3861460 gaagtcctagtttaactggcaaaatgtcgaaattgttaggccgga 3861416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 4106558 - 4106602
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  4106558 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 4106602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 9379995 - 9380039
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  9379995 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 9380039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 18944928 - 18944972
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||||    
T  18944928 gaagtcctagttcaactggcaaaatgccgaaattgttaggccgga 18944972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 31717301 - 31717345
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  31717301 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 31717345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 32251459 - 32251415
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||| ||||||    
T  32251459 gaagtcctagttcaactggcaaaatgccgaaattgttaagtcgga 32251415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 32986107 - 32986151
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  32986107 gaagttctagctcaactgataaaatatcgaaattgttagggcgga 32986151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 38397486 - 38397530
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||| ||||||||| | ||||||||||| |||||    
T  38397486 gaagtcctagttcaattggtaaaatgttgaaattgttagatcgga 38397530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 41862791 - 41862835
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||| || ||| ||||| |||||||||||||||||||    
T  41862791 gaagtcctagtttaattggcaaaatgtcgaaattgttaggtcgga 41862835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 18779915 - 18779959
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  18779915 gaagtcctagttcaattggtaaaatgtcgaaattgttaggtcgga 18779959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 6598405 - 6598448
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  6598405 aagtactagttcaactggtaaaatatcgaaattgttaggccgga 6598448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 25510426 - 25510379
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  25510426 gaagtcctagctcaactggtaaaataccgaaattgttaggccggacgc 25510379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 16535067 - 16535023
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  16535067 gaagtcctagttcaactgataaaatgtcgaaattgttaggccgga 16535023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 23497636 - 23497592
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||    
T  23497636 gaagtcctagttcaactggtaaaatgccgaaattgttaggccgga 23497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 35706856 - 35706900
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||    
T  35706856 gaagtcctagctcaactggcaaaatgtcgaaattgttaggtcgga 35706900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 42007339 - 42007295
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  42007339 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 42007295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 43461458 - 43461414
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  43461458 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 43461414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 12541459 - 12541416
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||    
T  12541459 aagtactaggtcaactggtaaaataccgaaattgttaggtcgga 12541416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 42211282 - 42211321
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  42211282 gaagtcttagttcaactggtaaaatgtcgaaattgttagg 42211321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 7907053 - 7907008
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcggacg 364  Q
    ||||| |||||||||||| ||||| || ||||||||||||||||||    
T  7907053 aagtcttagttcaactggcaaaatttcaaaattgttaggtcggacg 7907008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 11816900 - 11816856
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||| ||||||||| |||||||||||||| ||||    
T  11816900 gaagtcctagctcaattggtaaaatgtcgaaattgttaggccgga 11816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 12236125 - 12236169
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  12236125 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 12236169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 13268099 - 13268055
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  13268099 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 13268055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 18368798 - 18368842
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  18368798 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 18368842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 35476614 - 35476570
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  35476614 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 35476570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 39070023 - 39070067
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  39070023 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 39070067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 39310370 - 39310414
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||| | |||||||||||||||||||| ||||    
T  39310370 gaagtcctagctcaactagcaaaatatcgaaattgttaggccgga 39310414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 40592317 - 40592361
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  40592317 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 40592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 42030248 - 42030291
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||    
T  42030248 gaagtcctagctcaac-ggtaaaatgtcgaaattgttaggtcgga 42030291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 42133566 - 42133522
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||| |||||||||||| |||||  ||||||||||||||||||    
T  42133566 gaagtcttagttcaactggcaaaatgccgaaattgttaggtcgga 42133522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 13048927 - 13048887
Alignment:
Q  322 tcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  13048927 tcctagttcaactggtaaaatatcgaaattgttaggccgga 13048887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 13053924 - 13053884
Alignment:
Q  322 tcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  13053924 tcctagttcaactggtaaaatatcgaaattgttaggccgga 13053884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 16689085 - 16689136
Alignment:
Q  313 gtctggaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacg 364  Q
    ||||| ||||||||| |||||||| |||||||||||||| ||||||||||||    
T  16689085 gtctgcaagtcctagctcaactggcaaaatatcgaaatttttaggtcggacg 16689136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 8214627 - 8214672
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggac 363  Q
    |||||||||| |||||||| |||||||||||||||||||| |||||    
T  8214627 gaagtcctagctcaactggaaaaatatcgaaattgttaggccggac 8214672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 19279976 - 19279932
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||    
T  19279976 gaagtcctagctcaactggtaaaatgccgaaattgttaggtcgga 19279932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 40685533 - 40685577
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||    
T  40685533 gaagtcctagctcaactggcaaaatgtcgaaattgttaggtcgga 40685577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 43025890 - 43025934
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||    
T  43025890 gaagtcctagttcaactgacaaaatatcgaaattgttaggccgga 43025934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 43500266 - 43500223
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||    
T  43500266 aagtcttagctcaactggtaaaatgtcgaaattgttaggtcgga 43500223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 38886512 - 38886474
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  38886512 aagtcctagctcaactggtaaaataccgaaattgttagg 38886474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 13948108 - 13948149
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtc 359  Q
    ||||| |||| |||||| ||||||||||||||||||||||||    
T  13948108 gaagttctagctcaactagtaaaatatcgaaattgttaggtc 13948149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 39787773 - 39787736
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttag 356  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  39787773 aagtcctagctcaactggtaaaatgtcgaaattgttag 39787736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 41651078 - 41651123
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcggacg 364  Q
    ||||||||| ||||||||||||||  |||||||||||||| |||||    
T  41651078 aagtcctagctcaactggtaaaatgccgaaattgttaggttggacg 41651123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 5598305 - 5598349
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  5598305 gaagtcctagctcaactggaaaaatgccgaaattgttaggtcgga 5598349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 11403173 - 11403217
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  11403173 gaagtcctagctcaactgggaaaatgccgaaattgttaggtcgga 11403217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 17068156 - 17068200
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  17068156 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 17068200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 22561291 - 22561247
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||    
T  22561291 gaagtcctagtttaactggcaaaataccgaaattgttaggccgga 22561247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 25821074 - 25821030
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||| |||||| |||||||||||||| ||||    
T  25821074 gaagtcctagctcaactgataaaatgtcgaaattgttaggccgga 25821030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 30455208 - 30455252
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||| |||||| |||||||||||||| ||||    
T  30455208 gaagtcctagctcaactgataaaatgtcgaaattgttaggccgga 30455252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 45007811 - 45007771
Alignment:
Q  322 tcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||| |||| |||||||||||||||||||||||| ||||    
T  45007811 tcctagctcaattggtaaaatatcgaaattgttaggccgga 45007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 49948245 - 49948289
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  49948245 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 49948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 50248033 - 50248077
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||| |||||| |||||||||||||| ||||    
T  50248033 gaagtcctagctcaactgataaaatgtcgaaattgttaggccgga 50248077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 2711308 - 2711355
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||||    
T  2711308 gaagtcctaactcaactggtaaaataccgaaattgttaggtcggacgc 2711355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 4128949 - 4128996
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  4128949 gaagtcctagctcaactggtaaaataccgaaattgttaggccggacgc 4128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 7098810 - 7098854
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  7098810 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 7098854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 31642815 - 31642759
Alignment:
Q  313 gtctggaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgctttg 369  Q
    ||||| ||||| |||||||||||  |||||  |||||||||||||||||||||||||    
T  31642815 gtctgcaagtcatagttcaactgacaaaatgccgaaattgttaggtcggacgctttg 31642759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 2958987 - 2959041
Alignment:
Q  308 gtgtcgtctggaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||| ||| ||||| ||| ||||||||||||||| |||||||||||||| ||||    
T  2958987 gtgtcatctagaagttctaattcaactggtaaaatgtcgaaattgttaggccgga 2959041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 2395681 - 2395637
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||| | |||||| ||||||||||||||||||    
T  2395681 gaagtcctaggtcaactagcaaaataacgaaattgttaggtcgga 2395637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 4083591 - 4083635
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  4083591 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 4083635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 8939630 - 8939674
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  8939630 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 8939674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 10181049 - 10181093
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  10181049 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 10181093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 21513076 - 21513120
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  21513076 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 21513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 37312532 - 37312579
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  37312532 gaagtcctagctcaactggtaaaataccgaaattgttaggccggacgc 37312579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 23526030 - 23525986
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||    
T  23526030 gaagtcctagttcaattggtaaaatgtcaaaattgttaggtcgga 23525986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 32590976 - 32591020
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  32590976 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 32591020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 46311567 - 46311523
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  46311567 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 46311523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 47410876 - 47410832
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||    
T  47410876 gaagtcctagctcaactggcaaaatgtcgaaattgttaggtcgga 47410832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 50238964 - 50238920
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  50238964 gaagtcctagctcaactggtaaaatgtcgaaattgttaggccgga 50238920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 36540109 - 36540148
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  36540109 gaagtcctagttcaagtggtaaaatgtcgaaattgttagg 36540148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 40639606 - 40639653
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcggacgc 365  Q
    ||||| |||| ||||||||||||||| ||||||||||||| |||||||    
T  40639606 gaagttctagctcaactggtaaaataccgaaattgttaggccggacgc 40639653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 44879357 - 44879318
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttagg 357  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  44879357 gaagtcctagttcaactggcaaaatgtcgaaattgttagg 44879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 12948814 - 12948858
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  12948814 gaagtcctagctcaactggtaaaatgacgaaattgttaggccgga 12948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 15003632 - 15003676
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  | ||||||||||||||||    
T  15003632 gaagtcctagttcaactggcaaaatgccaaaattgttaggtcgga 15003676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 34397684 - 34397728
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||||    
T  34397684 gaagtcctagttcaactggcaaaatgccgaaattgttaggccgga 34397728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 38127966 - 38127922
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  38127966 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 38127922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 40193080 - 40193036
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| | |||||||||||| |||||||||||||| ||||    
T  40193080 gaagtcctagcttaactggtaaaatgtcgaaattgttaggccgga 40193036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 40559678 - 40559722
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||| ||||||  ||||||||||||||||||    
T  40559678 gaagtcctagctcaactgataaaatgccgaaattgttaggtcgga 40559722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 41464668 - 41464712
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  41464668 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 41464712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 44037568 - 44037524
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  44037568 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 44037524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 45475356 - 45475312
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||| ||||| ||||||||||||||| ||||||||||||| ||||    
T  45475356 gaagacctagctcaactggtaaaataccgaaattgttaggccgga 45475312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 46894817 - 46894861
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||  |||||||||||||||||||| ||||    
T  46894817 gaagtcctagctcaactgacaaaatatcgaaattgttaggccgga 46894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 53583965 - 53584009
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  53583965 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 53584009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 15720 - 15676
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||    
T  15720 gaagtcctagttcaactggcaaaatgccgaaattgttaggtcgga 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 29334503 - 29334543
Alignment:
Q  322 tcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  29334503 tcctagttcaactggcaaaataccgaaattgttaggtcgga 29334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 24407502 - 24407545
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||    
T  24407502 aagtcctagctcaactggcaaaatgtcgaaattgttaggtcgga 24407545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 31436041 - 31435998
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||    
T  31436041 aagtcctagttcaactggtaaaatgccgaaattgttaggccgga 31435998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 1083512 - 1083553
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtc 359  Q
    ||||||||||||||||||| |||||  |||||||||||||||    
T  1083512 gaagtcctagttcaactggcaaaatgccgaaattgttaggtc 1083553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 17815265 - 17815224
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcg 360  Q
    |||||||||||||||||| |||||  ||||||||||||||||    
T  17815265 aagtcctagttcaactggcaaaatgccgaaattgttaggtcg 17815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 3084366 - 3084322
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  3084366 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 3084322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 24712092 - 24712136
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||    
T  24712092 gaagtcctagctcaactggcaaaatgccgaaattgttaggtcgga 24712136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 28187288 - 28187244
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||| |||||| |||||||||||||| ||||    
T  28187288 gaagtcctagctcaactgataaaatgtcgaaattgttaggccgga 28187244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 29428059 - 29428103
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| |||||| ||||||||||||| ||||    
T  29428059 gaagtcctagctcaactggcaaaataccgaaattgttaggccgga 29428103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 41049052 - 41049084
Alignment:
Q  325 tagttcaactggtaaaatatcgaaattgttagg 357  Q
    ||||||||||| |||||||||||||||||||||    
T  41049052 tagttcaactgataaaatatcgaaattgttagg 41049084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 42116485 - 42116529
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||| ||||| |||||||||||||| |||||||| ||||||||||    
T  42116485 gaagccctagctcaactggtaaaatgtcgaaatttttaggtcgga 42116529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 3918 - 3873
Alignment:
Q  319 aagtcctagttcaactggtaaaatatcgaaattgttaggtcggacg 364  Q
    ||||||||| ||||||||||||||  |||||||||||||| |||||    
T  3918 aagtcctagctcaactggtaaaatgccgaaattgttaggttggacg 3873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 822 - 866
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  822 gaagtcctagctcaactggcaaaatgtcgaaattgttaggccgga 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 39437 - 39393
Alignment:
Q  318 gaagtcctagttcaactggtaaaatatcgaaattgttaggtcgga 362  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||||    
T  39437 gaagtcctagctcaactggtaaaatgccgaaattgttaggccgga 39393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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