View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6698_high_45 (Length: 320)
Name: NF6698_high_45
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6698_high_45 |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 14 - 301
Target Start/End: Original strand, 51705000 - 51705287
Alignment:
| Q |
14 |
aatatagacacacaagcaagttaattgagtgtatgaagaaaaatgagtcacgttgaaagtggagcgaagttattggctacactagcacttgctctctttc |
113 |
Q |
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| T |
51705000 |
aatatagacacacaagcaagttaattgagtgtatgaagaaaaatgagtcaagttgaaactggagcgaagttattggctacactagcacttgctctctttc |
51705099 |
T |
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| Q |
114 |
atcttcttccagtaaaccctacattgtccgaatttaaccgtcaccgtgaaattacattgttagaggaacacttaactgctgcggaaaccactgttagagt |
213 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
51705100 |
atcttcttccagtaacccctacattgtccgaatttaaccgtcaccgtgaaattacattgttagaggaacacttaactgctgcggaaaccaccgttagagt |
51705199 |
T |
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| Q |
214 |
ggtcagagttcggaaagacggaaccggagattttacgacggtgacggatgccgttaaaagcattccgtcaggaaacaaaaggagagtg |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51705200 |
ggtcagagttcggaaagacggaaccggagattttacgacggtgacggatgccgttaaaagcattccgtcaggaaacaaaaggagagtg |
51705287 |
T |
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